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Homologs of ef0003 gene of AF454824

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EF0481
( NP_814264.1 )

hypothetical protein

NC_004668
(Enterococcus faecalis V583)

3e-33

100

2) EFAU085_01569
( YP_008395091.1 )

Helix-turn-helix domain protein

NC_021994
(Enterococcus faecium AUS0085)

2e-28

3) EF1849
( NP_815541.1 )

hypothetical protein

NC_004668
(Enterococcus faecalis V583)

2e-28

4) EFAU004_01823
( YP_005355025.1 )

Helix-turn-helix domain protein

NC_017022
(Enterococcus faecium Aus0004)

1e-13

5) EFAU085_01847
( YP_008395369.1 )

Helix-turn-helix domain protein

NC_021994
(Enterococcus faecium AUS0085)

1e-13

6) HMPREF0351_11785
( YP_006376391.1 )

hypothetical protein

NC_017960
(Enterococcus faecium DO)

4e-13

7) OG1RF_10816
( YP_005707873.1 )

hypothetical protein

NC_017316
(Enterococcus faecalis OG1RF)

8e-11

8) FPR_01280
( YP_007798981.1 )

hypothetical protein

NC_021020
(Faecalibacterium prausnitzii SL3/3)

7e-10

9) CK5_05210
( YP_007804081.1 )

hypothetical protein

NC_021022
([Ruminococcus] obeum A2-162)

2e-09

10) CK5_36080
( YP_007806751.1 )

hypothetical protein

NC_021022
([Ruminococcus] obeum A2-162)

3e-09

11) EFAU004_02772
( YP_005355970.1 )

Helix-turn-helix domain protein

NC_017022
(Enterococcus faecium Aus0004)

6e-07

12) EFAU085_00740
( YP_008394264.1 )

Helix-turn-helix domain protein

NC_021994
(Enterococcus faecium AUS0085)

6e-07

• Sequence Alignments

1) EF0481 in NC_004668


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score =  134 bits (491),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 81/81 (100%), Positives = 81/81 (100%), Gaps = 0/81 (0%)

Query  1   MVDNKKKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVD  60
           MVDNKKKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVD
Sbjct  1   MVDNKKKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVD  60

Query  61  EYMLRQLEIKLIEAILKFKIN  81
           EYMLRQLEIKLIEAILKFKIN
Sbjct  61  EYMLRQLEIKLIEAILKFKIN  81

2) EFAU085_01569 in NC_021994


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score =  118 bits (430),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 68/81 (84%), Positives = 73/81 (91%), Gaps = 0/81 (0%)

Query  1   MVDKSKKRQYLLVPLSIILSALEGDPISIKMILKHYHSYMAKLCLTNGFNEVGQFVTYVD  60
           MVD+ KKRQY LVPLS+I SALE DPISIKMILKHYHSY+ KLCLTNGFNE  QF+TYVD
Sbjct  1   MVDNKKKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVD  60

Query  61  EYMISQLEIKLIEAILKFKIN  81
           EYM+ QLEIKLIEAILKFKIN
Sbjct  61  EYMLRQLEIKLIEAILKFKIN  81

3) EF1849 in NC_004668


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score =  118 bits (431),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 65/81 (81%), Positives = 75/81 (93%), Gaps = 0/81 (0%)

Query  1   MVDKQRNQHYPLVPISIILSALKEDPISIKMILKHYHGYITKLCLKNGFNEVGQFITYVD  60
           MVD++++++YPLVP+S+I SAL EDPISIKMILKHYH+YI KLCL NGFNE  QFITYVD
Sbjct  1   MVDNKKKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVD  60

Query  61  EYMLRQLEIKLIEAILKFKVN  81
           EYMLRQLEIKLIEAILKFK+N
Sbjct  61  EYMLRQLEIKLIEAILKFKIN  81

4) EFAU004_01823 in NC_017022


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 69.4 bits (244),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 33/82 (41%), Positives = 55/82 (68%), Gaps = 1/82 (1%)

Query  1   MSNMKQNKRYIPFIPLTTIKAAASGDSIAMSIVLSKYQNYISRLAMKPVYEEEKGMVMYV  60
           M + K++++Y P++PL+ I++A   D+I++ ++L  Y++YI +L +   ++E    + YV
Sbjct  1   MVDNKKKRQY-PLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYV  59

Query  61  DEYMRRQLETKLIEKILEFDTT  82
           DEYM RQLE KLIE IL F   
Sbjct  60  DEYMLRQLEIKLIEAILKFKIN  81

5) EFAU085_01847 in NC_021994


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 69.4 bits (244),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 33/82 (41%), Positives = 55/82 (68%), Gaps = 1/82 (1%)

Query  1   MSNMKQNKRYIPFIPLTTIKAAASGDSIAMSIVLSKYQNYISRLAMKPVYEEEKGMVMYV  60
           M + K++++Y P++PL+ I++A   D+I++ ++L  Y++YI +L +   ++E    + YV
Sbjct  1   MVDNKKKRQY-PLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYV  59

Query  61  DEYMRRQLETKLIEKILEFDTT  82
           DEYM RQLE KLIE IL F   
Sbjct  60  DEYMLRQLEIKLIEAILKFKIN  81

6) HMPREF0351_11785 in NC_017960


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 67.9 bits (238),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 32/78 (42%), Positives = 53/78 (68%), Gaps = 1/78 (1%)

Query  2   KQNKRYIPFIPLTTIKAAASGDSIAMSIVLSKYQNYISRLAMKPVYEEEKGMVMYVDEYM  61
           K++++Y P++PL+ I++A   D+I++ ++L  Y++YI +L +   ++E    + YVDEYM
Sbjct  5   KKKRQY-PLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDEYM  63

Query  62  RRQLETKLIEKILEFDTT  79
            RQLE KLIE IL F   
Sbjct  64  LRQLEIKLIEAILKFKIN  81

7) OG1RF_10816 in NC_017316


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 60.0 bits (208),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 35/75 (47%), Positives = 52/75 (70%), Gaps = 0/75 (0%)

Query  2   KNNQRPKLSVSVILSAQQGDVISMTEVLNHYKDYINHLSLQNVYEEGKDTRIQVDEYMKR  61
           K+ Q P +++SVI SA + D IS+  +L+HY  YI  L L N ++E+ +    VDEYM R
Sbjct  6   KKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDEYMLR  65

Query  62  RLETKLMEAVLKYKV  76
           +LE KL+EA+LK+K+
Sbjct  66  QLEIKLIEAILKFKI  80

8) FPR_01280 in NC_021020


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 56.8 bits (196),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 30/66 (46%), Positives = 44/66 (67%), Gaps = 0/66 (0%)

Query  11  LLPLSVIRSACAGDTDAVEQVLQHYRGYINKLCTGILYDKHGQPHVCIDEYMKRHLEIKL  70
           L+PLSVI+SA   D  ++  +L+HY++YI KLC    ++   Q    +DEYM R+LEIKL
Sbjct  12  LVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDEYMLRQLEIKL  71

Query  71  ISSIVT  76
           I +I+ 
Sbjct  72  IEAILK  77

9) CK5_05210 in NC_021022


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 32/79 (41%), Positives = 51/79 (65%), Gaps = 0/79 (0%)

Query  3   TEEKSASNKKLISLCVIERALEGDIQAINKVLKHYEGYIAKLSIRKMYDEYGSVHYCVDE  62
            ++K   +  L++L VI+ ALE D  +I+ +LKHY++YI KL + + ++E       VDE
Sbjct  2   VDNKKKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDE  61

Query  63  TLRRRLETKLIKTILGFKM  81
            + R+LE KLI +IL FK+
Sbjct  62  YMLRQLEIKLIEAILKFKI  80

10) CK5_36080 in NC_021022


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/69 (48%), Positives = 47/69 (69%), Gaps = 0/69 (0%)

Query  13  LIPLWVIERALEGDIQAINKILKHYEGYIAKLSVRKMYDEYGCVHYCVDETLRRRLETKL  72
           L+PL VI+ ALE D  +I+ ILKHY++YI KL + + ++E       VDE + R+LE KL
Sbjct  12  LVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDEYMLRQLEIKL  71

Query  73  IKTIIGFKI  81
           I +I+ FKI
Sbjct  72  IEAILKFKI  80

11) EFAU004_02772 in NC_017022


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 46.9 bits (158),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 43/66 (66%), Gaps = 0/66 (0%)

Query  11  LLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKL  70
           L+PLSVI++A   D+ ++  +L+ Y +Y+ KLC    ++E       +DE M R+LEIKL
Sbjct  12  LVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDEYMLRQLEIKL  71

Query  71  IHAIVT  76
           I+AI+ 
Sbjct  72  IEAILK  77

12) EFAU085_00740 in NC_021994


> AF454824|3|G3|21693262|AAM75209.1|Enterococcus_faecalis_MMH594|-|2456..2701|ef0003|-|conserved 
hypothetical
Length=81

 Score = 46.9 bits (158),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 43/66 (66%), Gaps = 0/66 (0%)

Query  11  LLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKL  70
           L+PLSVI++A   D+ ++  +L+ Y +Y+ KLC    ++E       +DE M R+LEIKL
Sbjct  12  LVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDEYMLRQLEIKL  71

Query  71  IHAIVT  76
           I+AI+ 
Sbjct  72  IEAILK  77