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Homologs of unnamed gene of AF326777

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SFxv_1117a
( YP_005726668.1 )

putative transcriptional regulator

NC_017328
(Shigella flexneri 2002017)

9e-43

100

2) O3M_15810
( YP_006770790.1 )

regulatory protein

NC_018650
(Escherichia coli 2009EL-2050)

7e-39

3) O3O_09470
( YP_006784979.1 )

regulatory protein

NC_018661
(Escherichia coli 2009EL-2071)

7e-39

4) O3K_15825
( YP_006779839.1 )

putative regulatory protein

NC_018658
(Escherichia coli 2011C-3493)

7e-39

5) ECO26_1262
( YP_003228313.1 )

regulatory protein

NC_013361
(Escherichia coli 11368)

1e-24

6) ECO111_1213
( YP_003233711.1 )

putative regulatory protein

NC_013364
(Escherichia coli 11128)

1e-23

7) Z1124
( NP_286659.1 )

prophage regulatory protein

NC_002655
(Escherichia coli EDL933)

1e-23

8) Z1563
( NP_287067.1 )

prophage regulatory protein

NC_002655
(Escherichia coli EDL933)

1e-23

9) ECs1302
( NP_309329.1 )

regulatory protein

NC_002695
(Escherichia coli Sakai)

1e-23

10) ECSP_1230
( YP_003077153.1 )

prophage regulatory protein

NC_013008
(Escherichia coli TW14359)

1e-23

11) CDCO157_1248
( YP_006312118.1 )

putative regulatory protein

NC_017906
(Escherichia coli Xuzhou21)

1e-23

12) ECOK1_1084
( YP_006100296.1 )

prophage CP4-57 Regulatory protein AlpA

NC_017628
(Escherichia coli IHE3034)

6e-23

13) UM146_12455
( YP_006111372.1 )

putative regulatory protein

NC_017632
(Escherichia coli UM146)

9e-23

14) ECABU_c10580
( YP_006105160.1 )

prophage regulatory protein

NC_017631
(Escherichia coli ABU 83972)

3e-22

15) UTI89_C1093
( YP_540108.1 )

prophage regulatory protein

NC_007946
(Escherichia coli UTI89)

9e-22

16) alpA
( NP_753094.1 )

prophage CP4-57 regulatory protein alpA

NC_004431
(Escherichia coli CFT073)

6e-19

17) alpA
( YP_006153197.1 )

prophage CP4-57 regulatory protein alpA

NC_017652
(Escherichia coli clone D i14)

6e-19

18) alpA
( YP_006148278.1 )

prophage CP4-57 regulatory protein alpA

NC_017651
(Escherichia coli clone D i2)

6e-19

• Sequence Alignments

1) SFxv_1117a in NC_017328


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  166 bits (612),  Expect = 9e-43, Method: Compositional matrix adjust.
 Identities = 101/101 (100%), Positives = 101/101 (100%), Gaps = 0/101 (0%)

Query  1    MHMENNMSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGS  60
            MHMENNMSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGS
Sbjct  1    MHMENNMSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGS  60

Query  61   ASVGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP  101
            ASVGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP
Sbjct  61   ASVGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP  101

2) O3M_15810 in NC_018650


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  153 bits (563),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 94/95 (99%), Positives = 94/95 (99%), Gaps = 0/95 (0%)

Query  1    MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  60
            MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR
Sbjct  7    MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61   ASAIDEWLMLHTAPAWSEPENKRKELNDDDKTITP  95
            ASAIDEWLMLHTAPAWSEPENK KELNDDDKTITP
Sbjct  67   ASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP  101

3) O3O_09470 in NC_018661


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  153 bits (563),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 94/95 (99%), Positives = 94/95 (99%), Gaps = 0/95 (0%)

Query  1    MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  60
            MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR
Sbjct  7    MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61   ASAIDEWLMLHTAPAWSEPENKRKELNDDDKTITP  95
            ASAIDEWLMLHTAPAWSEPENK KELNDDDKTITP
Sbjct  67   ASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP  101

4) O3K_15825 in NC_018658


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  153 bits (563),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 94/95 (99%), Positives = 94/95 (99%), Gaps = 0/95 (0%)

Query  1    MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  60
            MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR
Sbjct  7    MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61   ASAIDEWLMLHTAPAWSEPENKRKELNDDDKTITP  95
            ASAIDEWLMLHTAPAWSEPENK KELNDDDKTITP
Sbjct  67   ASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP  101

5) ECO26_1262 in NC_013361


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 60/95 (64%), Positives = 80/95 (85%), Gaps = 4/95 (4%)

Query  1   MGDKMPDQSGHCRTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGS  60
           M ++M++Q+G+  TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+S
Sbjct  3   MENNMSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSAS  62

Query  61  VGWRSSAIDEWLTLHTVPARSA----VKGVNDEVR  91
           VGWR+SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  63  VGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

6) ECO111_1213 in NC_013364


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 59/91 (65%), Positives = 77/91 (85%), Gaps = 4/91 (4%)

Query  1   MPDQSGHCRTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G+  TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDEWLTLHTVPARSA----VKGVNDEVR  87
           +SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

7) Z1124 in NC_002655


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 59/91 (65%), Positives = 77/91 (85%), Gaps = 4/91 (4%)

Query  1   MPDQSGHCRTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G+  TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDEWLTLHTVPARSA----VKGVNDEVR  87
           +SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

8) Z1563 in NC_002655


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 59/91 (65%), Positives = 77/91 (85%), Gaps = 4/91 (4%)

Query  1   MPDQSGHCRTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G+  TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDEWLTLHTVPARSA----VKGVNDEVR  87
           +SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

9) ECs1302 in NC_002695


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 59/91 (65%), Positives = 77/91 (85%), Gaps = 4/91 (4%)

Query  1   MPDQSGHCRTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G+  TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDEWLTLHTVPARSA----VKGVNDEVR  87
           +SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

10) ECSP_1230 in NC_013008


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 59/91 (65%), Positives = 77/91 (85%), Gaps = 4/91 (4%)

Query  1   MPDQSGHCRTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G+  TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDEWLTLHTVPARSA----VKGVNDEVR  87
           +SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

11) CDCO157_1248 in NC_017906


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 59/91 (65%), Positives = 77/91 (85%), Gaps = 4/91 (4%)

Query  1   MPDQSGHCRTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G+  TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDEWLTLHTVPARSA----VKGVNDEVR  87
           +SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

12) ECOK1_1084 in NC_017628


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score =  100 bits (361),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 59/95 (63%), Positives = 78/95 (83%), Gaps = 4/95 (4%)

Query  25   MGDKMPDQSGYCWTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGS  84
            M ++M++Q+G   TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+S
Sbjct  3    MENNMSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSAS  62

Query  85   VGWRSSAIDKWLTLHTVPARSA----VKGVNDEVR  115
            VGWR+SAID WL LHT PA+S     +K +ND+ +
Sbjct  63   VGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

13) UM146_12455 in NC_017632


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score = 99.6 bits (359),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 59/95 (63%), Positives = 78/95 (83%), Gaps = 4/95 (4%)

Query  1   MGDKMPDQSGYCWTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGS  60
           M ++M++Q+G   TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+S
Sbjct  3   MENNMSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSAS  62

Query  61  VGWRSSAIDKWLTLHTVPARSA----VKGVNDEVR  91
           VGWR+SAID WL LHT PA+S     +K +ND+ +
Sbjct  63  VGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

14) ECABU_c10580 in NC_017631


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 59/91 (65%), Positives = 76/91 (84%), Gaps = 4/91 (4%)

Query  1   MPDQSGYCWTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G   TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDEWLTLHTVPARSA----VKGVNDEVR  87
           +SAIDEWL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

15) UTI89_C1093 in NC_007946


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score = 96.2 bits (346),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 58/91 (64%), Positives = 75/91 (83%), Gaps = 4/91 (4%)

Query  1   MPDQSGYCWTPSRILRMPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWR  60
           M++Q+G   TPSRILRM+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR
Sbjct  7   MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWR  66

Query  61  SSAIDKWLTLHTVPARSA----VKGVNDEVR  87
           +SAID WL LHT PA+S     +K +ND+ +
Sbjct  67  ASAIDEWLMLHTAPAWSEPENKLKELNDDDK  97

16) alpA in NC_004431


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score = 86.8 bits (310),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 49/75 (66%), Positives = 63/75 (84%), Gaps = 4/75 (5%)

Query  1   MPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWRSSAIDEWLTLHTVPAR  60
           M+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR+SAIDEWL LHT PA+
Sbjct  23  MAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWRASAIDEWLMLHTAPAW  82

Query  61  SA----VKGVNDEVR  71
           S     +K +ND+ +
Sbjct  83  SEPENKLKELNDDDK  97

17) alpA in NC_017652


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score = 86.8 bits (310),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 49/75 (66%), Positives = 63/75 (84%), Gaps = 4/75 (5%)

Query  1   MPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWRSSAIDEWLTLHTVPAR  60
           M+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR+SAIDEWL LHT PA+
Sbjct  23  MAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWRASAIDEWLMLHTAPAW  82

Query  61  SA----VKGVNDEVR  71
           S     +K +ND+ +
Sbjct  83  SEPENKLKELNDDDK  97

18) alpA in NC_017651


> AF326777|3|G3|15808699|AAL08428.1|Shigella_flexneri_2a_YSH6000|-|3507..3812|-|-|putative 
transcriptional regulator
Length=101

 Score = 86.8 bits (310),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 49/75 (66%), Positives = 63/75 (84%), Gaps = 4/75 (5%)

Query  1   MPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWRSSAIDEWLTLHTVPAR  60
           M+EL++LLGISRSTIY K+NP SKY D+TFP+P+RLGS+SVGWR+SAIDEWL LHT PA+
Sbjct  23  MAELTRLLGISRSTIYVKINPASKYHDPTFPKPIRLGSASVGWRASAIDEWLMLHTAPAW  82

Query  61  SA----VKGVNDEVR  71
           S     +K +ND+ +
Sbjct  83  SEPENKLKELNDDDK  97