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Homologs of hrcU gene of AF069652

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HrcU
( YP_234297.1 )

type III secretion protein HrcU

NC_007005
(Pseudomonas syringae B728a)

7e-141

2) hrcU
( YP_273541.1 )

type III secretion component protein HrcU

NC_005773
(Pseudomonas syringae 1448A)

5e-139

3) hrcU
( NP_791219.1 )

type III secretion protein HrcU

NC_004578
(Pseudomonas syringae DC3000)

1e-126

4) Pmen_0049
( YP_001185555.1 )

YscU/HrpY family type III secretion protein

NC_009439
(Pseudomonas mendocina ymp)

4e-101

5) hrcU
( YP_005210966.1 )

protein HrcU

NC_016830
(Pseudomonas fluorescens F113)

5e-78

6) hrcU
( YP_003883249.1 )

type III secretion inner membrane protein

NC_014500
(Dickeya dadantii 3937)

5e-75

7) hrcU
( YP_003539971.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

5e-72

8) hrcU
( YP_003529883.1 )

type III secretion protein HrcU

NC_013961
(Erwinia amylovora CFBP1430)

5e-72

9) Dd1591_1882
( YP_003004211.1 )

YscU/HrpY family type III secretion protein

NC_012912
(Dickeya zeae Ech1591)

5e-72

10) PSEBR_a5379
( YP_004356889.1 )

type III secretion protein, membrane protein

NC_015379
(Pseudomonas brassicacearum NFM421)

4e-71

11) Dd586_1879
( YP_003333443.1 )

type III secretion protein, YscU/HrpY family

NC_013592
(Dickeya dadantii Ech586)

6e-71

12) hrcU
( YP_005818252.1 )

HrcU

NC_017445
(Erwinia sp. Ejp617)

3e-70

13) Ser39006_2922
( YP_008523304.1 )

type III secretion protein, YscU/HrpY family

NC_022268
(Serratia sp. ATCC 39006)

2e-69

14) hrcU
( YP_005804094.1 )

type III secretion protein HrcU

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-67

15) hrcU
( YP_002650077.1 )

Hrp/hrc secretion/translocation pathway protein HrcU

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-67

16) hrcU
( YP_001906460.1 )

HrcU protein

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-67

17) rscU
( YP_002870383.1 )

putative type III secretion protein

NC_012660
(Pseudomonas fluorescens SBW25)

2e-66

18) H045_00205
( YP_007395613.1 )

putative type III secretion protein

NC_020209
(Pseudomonas poae RE*1-1-14)

1e-64

19) Marme_1068
( YP_004312179.1 )

type III secretion protein, YscU/HrpY family

NC_015276
(Marinomonas mediterranea MMB-1)

6e-64

20) hrcU
( YP_050171.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

4e-62

21) D781_3935
( YP_007346310.1 )

type III secretion protein, YscU/HrpY family

NC_020064
(Serratia marcescens FGI94)

1e-61

22) PC1_2215
( YP_003017790.1 )

YscU/HrpY family type III secretion protein

NC_012917
(Pectobacterium carotovorum PC1)

1e-58

23) PCC21_022940
( YP_006646950.1 )

type III secretion protein

NC_018525
(Pectobacterium carotovorum PCC21)

3e-57

24) rscU
( YP_006322234.1 )

type III secretion protein RscU

NC_017911
(Pseudomonas fluorescens A506)

4e-54

25) hrcU
( YP_003774224.1 )

type III secretion HrcU transmembrane protein

NC_014323
(Herbaspirillum seropedicae SmR1)

6e-39

• Sequence Alignments

1) HrcU in NC_007005


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  493 bits (1858),  Expect = 7e-141, Method: Compositional matrix adjust.
 Identities = 293/325 (91%), Positives = 320/325 (99%), Gaps = 0/325 (0%)

Query  35   MAVSEITLALADESVNRLEALLSLSFQGIDRSFAASVELIASEGLSVLLSFTLCSVGIAM  94
            M VSEITL+LAD+SV+RL+ALL+LSF+GIDRSFAASVELIASEGLSVLLSFTLCSVG+AM
Sbjct  1    MVVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAM  60

Query  95   LMRLISSWMQIGFLFAPKALKIDPNKINPFSHAKQMFSGQnllnlllSVLKAIAIGATLY  154
            LMRL+S+WMQIGFLFAPKALK+D NKINPFSHAKQMFSGQN+LNLLLS+LKA+AIGATLY
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  155  VQVKPVLGTLVLLANSDLTTYWHALVELFRHILRVILGLLLAIAMIDFAMQKYFHAKKLR  214
            +QVKP LG+L+LLANSDLTTYWHALVELFRHILRVILGLLL +AM+DFAMQKYFHAKKLR
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  215  MSHEDIKKEYKQSEGDPHVKGHRRQLAQEILNQEPSAAPKPVEDADMLLVNPTHYAVALY  274
            MSHEDIKKEYKQSEGDPHVKGHRRQL++EILNQEPSAAP+PVE+ADMLLVNPTHYAVALY
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALY  240

Query  275  YRPGETPLPLIHCKGEDEEALALIARAKKAGIPVVQSIWLTRTLYRSKVGKYIPRPTLQA  334
            YRP ETPLPLIHCKGEDEEALALIARAK+AGIPVV+SIWLTRTLYR+KVGKYIPRPTLQA
Sbjct  241  YRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQA  300

Query  335  VGHIYKVVRQLDEVTDEVIQVEVEL  359
            VGHIYK+VRQLDE+TDEVIQVEVEL
Sbjct  301  VGHIYKMVRQLDEITDEVIQVEVEL  325

2) hrcU in NC_005773


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  486 bits (1834),  Expect = 5e-139, Method: Compositional matrix adjust.
 Identities = 320/325 (99%), Positives = 324/325 (99%), Gaps = 0/325 (0%)

Query  35   MVVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAM  94
            MVVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAM
Sbjct  1    MVVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAM  60

Query  95   LMRLVSSWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  154
            LMRLVS+WMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  155  MQVKPALGALILLANSDLTTYWHALVELFRHilrvilglllvvAMVDFAMQKYFHAKKLR  214
            MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  215  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALY  274
            MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALY
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALY  240

Query  275  YRPGETPLPLIHCKGEDEEALALIARAKKAGIPVVQSIWLTRTLYRAKVGKYIPRPTLQA  334
            YRP ETPLPLIHCKGEDEEALALIARAK+AGIPVV+SIWLTRTLYRAKVGKYIPRPTLQA
Sbjct  241  YRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQA  300

Query  335  VGHIYKVVRQLDEITDEVIQVEVEL  359
            VGHIYK+VRQLDEITDEVIQVEVEL
Sbjct  301  VGHIYKMVRQLDEITDEVIQVEVEL  325

3) hrcU in NC_004578


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  445 bits (1678),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 275/325 (85%), Positives = 317/325 (98%), Gaps = 0/325 (0%)

Query  35   LAVSEVTLGLANESVNRLQALLALTFKGIERPFMSAVELIASEGLSVVLSFTLCSVGLAM  94
            + VSE+TLGLA++SV+RLQALLAL+FKGI+R+F ++VELIASEGLSV+LSFTLCSVG+AM
Sbjct  1    MVVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAM  60

Query  95   LMRLISSWVQIGFLFAPKALKLDIKKIDPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  154
            LMRL+S+W+QIGFLFAPKALKLDI+KI+PFSHAKQMFSGQNILNLLLSILKAVAIGATLY
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  155  TQVKPALGTLILLANSDLATYLHALIELFQHvlrvilglllvialiDFAMQKYFHAKKLR  214
             QVKPALG+LILLANSDL+TY HAL+ELF+H+LRVILGLLLV+A++DFAMQKYFHAKKLR
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  215  MSHEDIKKEYKQSEGDPHVKGHRRQLAHEILNQEPSAAPKPVEEADMLLVNPTHYAVALY  274
            MSHEDIKKEYKQSEGDPHVKGHRRQL+HEILNQEPSAAP+PVEEADMLLVNPTHYAVALY
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALY  240

Query  275  YRPGETPLPMIHCKGEDEDALALIAQAKKAGIPVVQSIWLARTLYKVNVGKYIPRPTLLA  334
            YRP ETPLP+IHCKGEDE+ALALIA+AK+AGIPVV+SIWL+RTLY+ +VGKYIPRPTL A
Sbjct  241  YRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQA  300

Query  335  VGHIYKVVRQLEEITDEVIRIDDDM  359
            VGHIYK+VRQL+EITDEVI+++ ++
Sbjct  301  VGHIYKMVRQLDEITDEVIQVEVEL  325

4) Pmen_0049 in NC_009439


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  360 bits (1354),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 217/325 (67%), Positives = 283/325 (88%), Gaps = 0/325 (0%)

Query  35   LMVSEITWSLATESVQRLQHLMALAINATGQPFLRIVGQLVDEAVTVLLGFLIFSVGVAM  94
            ++VSEIT +LA +SV+RLQ L+AL++++ +++F   V  +  E+++VLL+F + SVG+AM
Sbjct  1    MVVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAM  60

Query  95   VMRLAGGWAQFGFLFAPKALKIDFNKLNPFPQLKQMFSAQNLTNLLMSILKAAVIGITLY  154
            +MRL + W Q+GFLFAPKALK+D+NK+NPF++ KQMFS+QN+ NLL+SILKA  IG TLY
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  155  VLLWPELGTLILLANSDLDTYWQSLMEVFRYILRCTLGLLLVLAAVDFGLQKYFHAKKLR  214
            + + P LG+LILLANSDL TYW++L+E+FR ILR  LGLLLV+A VDF++QKYFHAKKLR
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  215  MSKDDVKKEYKQSEGDPMVKGQRRQLAHELLNQPPSTAARPVEEADMLVVNPTHYAVALY  274
            MS +D+KKEYKQSEGDP VKG+RRQL+HE+LNQ PS+A+ PVEEADML+VNPTHYAVALY
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALY  240

Query  275  YRPGKTPLPMIHCKGEDEDalaliarakkariPVVQSVWLARTLYKVNAGRHIPRPTLEA  334
            YRP  TPLP+IHCKGEDE+ALALIARAK+A IPVV+S+WL+RTLY+ + G+ IPRPTL+A
Sbjct  241  YRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQA  300

Query  335  VAHIYQLVKQLDEVTDEIIQADSGL  359
            V+HIY++V+QLDE+TDE+IQ +  L
Sbjct  301  VGHIYKMVRQLDEITDEVIQVEVEL  325

5) hrcU in NC_016830


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  284 bits (1063),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 169/320 (53%), Positives = 259/320 (81%), Gaps = 1/320 (0%)

Query  41   ITEVALTQADDSMQALGDMVTFPLRRLDVDFVRAFEETLAHAGGVLLNFTLMTVGLAIVT  100
            ++E++L  ADDS++ L  +++++++ +D  F  + E   +++ +VLL+FTL +VG+A++ 
Sbjct  3    VSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLM  62

Query  101  RLVAGWIQFGFLFAPEALQPDPNRLNPLNQAKQMFSGQALINLFMGLVKAVFIGTVIYLV  160
            RLV+ W+Q+GFLFAP AL+ D N++NP+++AKQMFSGQ ++NL+++++KAV IG+ +Y+ 
Sbjct  63   RLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  161  TLPALGSLINLVNGDLHSYWRGLASLFRHIMHICLGVLLVLAILDFGLQKYFFAKRLRMS  220
              PALG+LI L N+DL +YW++L  LFRHI+++ LG+LLV+A++DF++QKYF AK+LRMS
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  221  eeevrkefkemeGDPHVKMHRRSLARQLVDQPVNKETKPVEDADMLVVNPTHFAVALLYR  280
            +E+++KE+K+ EGDPHVK HRR L++++++Q  +   +PVE+ADML+VNPTH+AVAL YR
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALYYR  242

Query  281  PEETPLPQLIVKGVDAEARALIERAKAARVPVIQCVWLARTIYREDVGGYIPRETLQAVA  340
            P ETPLP +  KG D EA ALI RAK A +PV++ +WL+RT+YR  VG YIPR TLQAV+
Sbjct  243  PCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVG  302

Query  341  HIYRVLRELDDEAKGEVIEI  360
            HIY+++R+L DE  +EVI++
Sbjct  303  HIYKMVRQL-DEITDEVIQV  321

6) hrcU in NC_014500


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  274 bits (1024),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 157/309 (51%), Positives = 246/309 (80%), Gaps = 1/309 (0%)

Query  39   EMILALTDSGMSKLQALMQLPLSRITDPFGHAADEIFSEALSLLTTFCLLTISVALLMRL  98
            E+ L+L+D ++ +LQAL+ L++  I  +F+ + + I SE+LS+L +F L ++++A+LMRL
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRL  64

Query  99   VGGWIQYGPLFAVEALKIDFNRLNPINQIKQMFTMRKLTDMLTNILKAVTIGLVFWLVVM  158
            V+ W+Q G LFA  ALK+D+N++NP+++ KQMF+ +++ ++L +ILKAV+IG  + + V 
Sbjct  65   VSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQVK  124

Query  159  PQLEWLVELAYGDLTTFWKGVENVLKSVARTTLSALLALGVLDFGLQKYYFLKQQRMSHE  218
            P L  L+ LA +DLTT+W ++ ++++ + R  L+ LL ++++DF++QKY+  K+ RMSHE
Sbjct  125  PALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMSHE  184

Query  219  DIRNEFKNSEGDPHMKGHRKSVAQEILNEPASPRVKPKVEDADLLLVNPTHYAVALFYRP  278
            DI++E+K+SEGDPH+KGHR+ +++EILN+ +S+  +P VE+AD+LLVNPTHYAVAL+YRP
Sbjct  185  DIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNP-VEEADMLLVNPTHYAVALYYRP  243

Query  279  GKTPLPRILLKGEDDQAKALIARAHQAGVPVIRFIWLARTLYRIPEGHYIPRDTLQPVAQ  338
              TPLP I  KGED++A ALIARA +AG+PV++ IWL+RTLYR   G YIPR TLQ+V++
Sbjct  244  CETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVGH  303

Query  339  VYKVLRQLE  347
            +YK++RQL+
Sbjct  304  IYKMVRQLD  312

7) hrcU in NC_013971


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  264 bits (986),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 166/326 (51%), Positives = 255/326 (79%), Gaps = 6/326 (1%)

Query  37   VVETVLALDDVGMQKLQALMMLPLARIGQPFELALSEVVSSAIILVATF--CGLTVAIAA  94
            V E  L+L D ++++LQAL+ L++  I+++F  ++  + S ++ ++ +F  C  +V++A 
Sbjct  3    VSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLC--SVGMAM  60

Query  95   LLRIIGGWIQYGPLFAPEALQPDFNRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFY  154
            L+R+++ W+Q G LFAP AL+ D+N++NP+++ KQMFS +++ ++L SI+KAVAI + +Y
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  155  LVLTPDLESLSRLAYGDLDSFWPAVETLLIHVSRQtlltllvltllDFGLQKYFFIKQQR  214
            + + P L +L  LA +DL ++W A+  L+ H+ R  L  LLV++++DF++QKYF  K+ R
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  215  MSHQDIRDEHKQSEGDPHMKGHRHALAHELLNQPATAVKSKPVEEADLLLVNPTHYAVAL  274
            MSH+DI+ E KQSEGDPH+KGHR+ L+HE+LNQ ++A  ++PVEEAD+LLVNPTHYAVAL
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAA-PNPVEEADMLLVNPTHYAVAL  239

Query  275  YYRPELTPLPRIICKGEDQQAKELIARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQ  334
            YYRP  TPLP I CKGED++A  LIARA++A IPV++ IWL+RTLYR++ G+ IPR TLQ
Sbjct  240  YYRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQ  299

Query  335  AVAQVYRVLRQLEDQITDEVIELEAE  360
            AV+++Y+++RQL++ ITDEVI++E E
Sbjct  300  AVGHIYKMVRQLDE-ITDEVIQVEVE  324

8) hrcU in NC_013961


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  264 bits (986),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 166/326 (51%), Positives = 255/326 (79%), Gaps = 6/326 (1%)

Query  37   VVETVLALDDVGMQKLQALMMLPLARIGQPFELALSEVVSSAIILVATF--CGLTVAIAA  94
            V E  L+L D ++++LQAL+ L++  I+++F  ++  + S ++ ++ +F  C  +V++A 
Sbjct  3    VSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLC--SVGMAM  60

Query  95   LLRIIGGWIQYGPLFAPEALQPDFNRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFY  154
            L+R+++ W+Q G LFAP AL+ D+N++NP+++ KQMFS +++ ++L SI+KAVAI + +Y
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  155  LVLTPDLESLSRLAYGDLDSFWPAVETLLIHVSRQtlltllvltllDFGLQKYFFIKQQR  214
            + + P L +L  LA +DL ++W A+  L+ H+ R  L  LLV++++DF++QKYF  K+ R
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  215  MSHQDIRDEHKQSEGDPHMKGHRHALAHELLNQPATAVKSKPVEEADLLLVNPTHYAVAL  274
            MSH+DI+ E KQSEGDPH+KGHR+ L+HE+LNQ ++A  ++PVEEAD+LLVNPTHYAVAL
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAA-PNPVEEADMLLVNPTHYAVAL  239

Query  275  YYRPELTPLPRIICKGEDQQAKELIARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQ  334
            YYRP  TPLP I CKGED++A  LIARA++A IPV++ IWL+RTLYR++ G+ IPR TLQ
Sbjct  240  YYRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQ  299

Query  335  AVAQVYRVLRQLEDQITDEVIELEAE  360
            AV+++Y+++RQL++ ITDEVI++E E
Sbjct  300  AVGHIYKMVRQLDE-ITDEVIQVEVE  324

9) Dd1591_1882 in NC_012912


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  264 bits (987),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 153/309 (50%), Positives = 244/309 (79%), Gaps = 1/309 (0%)

Query  39   EMILALTDSGMSKLQALMQLPLSRISDPFGHAADEVFSEalallaTFCLLTISVALLMRI  98
            E+ L+L+D ++ +LQAL+ L++  I  +F+ + + + SE+L++L +F L ++++A+LMR+
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRL  64

Query  99   VGGWIQYGPLFAVEALKLDFNRLNPINQIKQMFTMRKLTDMLTNLLKATTIGLVFWLVVT  158
            V+ W+Q G LFA  ALKLD+N++NP+++ KQMF+ +++ ++L ++LKA +IG  + + V 
Sbjct  65   VSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQVK  124

Query  159  PQLEWLVELAYGDLTAFWKGVENVLKSVSRTTLSALLALGVFDFGLQKYYFLKQQRMSHE  218
            P L  L+ LA +DLT++W ++ ++++ + R  L+ LL +++ DF++QKY+  K+ RMSHE
Sbjct  125  PALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMSHE  184

Query  219  DIRNEYKNSEGDPHMKGHRKSVAQEILNEPASPRVKPKVEDADLLLVNPTHYAVALFYRP  278
            DI++EYK+SEGDPH+KGHR+ +++EILN+ +S+  +P VE+AD+LLVNPTHYAVAL+YRP
Sbjct  185  DIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNP-VEEADMLLVNPTHYAVALYYRP  243

Query  279  GKTPLPRILLKGEDDHARALIARAHQAGVPVIRFIWLARTLYRVPEGHYIPRDTLQPVAQ  338
              TPLP I  KGED++A ALIARA +AG+PV++ IWL+RTLYR   G YIPR TLQ+V++
Sbjct  244  CETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVGH  303

Query  339  VYKVLRQLE  347
            +YK++RQL+
Sbjct  304  IYKMVRQLD  312

10) PSEBR_a5379 in NC_015379


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  261 bits (975),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 170/320 (54%), Positives = 257/320 (81%), Gaps = 1/320 (0%)

Query  41   ITEVALTQADDSMQALGDMVTFPLHRLDVDFVRAFEETLAHAGGVLLNFTLMTVGLAIVT  100
            ++E++L  ADDS++ L  ++++++  +D  F  + E   +++ +VLL+FTL +VG+A++ 
Sbjct  3    VSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLM  62

Query  101  RLVAGWIQFGFLFAPEALQPDPNRLNPMNQAKQMFSGQALINLFMGLVKAVFIGTVIYLV  160
            RLV+ W+Q+GFLFAP AL+ D N++NP ++AKQMFSGQ ++NL+++++KAV IG+ +Y+ 
Sbjct  63   RLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  161  TLPALGSLINLVNGDLNSYWRGLASLFRHIMHIClgvllvlalldfglQKYFFAKRLRMS  220
              PALG+LI L N+DL +YW++L  LFRHI+++ LG+LLV+A++DF++QKYF AK+LRMS
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  221  eeevrkefkemeGDPHVKMHRRSLARQLVDQPVNKETKPVEDADMLVVNPTHFAVALLYR  280
            +E+++KE+K+ EGDPHVK HRR L++++++Q  +   +PVE+ADML+VNPTH+AVAL YR
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALYYR  242

Query  281  PEETPLPQLIVKGVDAEARALIERAKVARVPVIQCIWLARTIYREDVGAYIPRETLQAVA  340
            P ETPLP +  KG D EA ALI RAK A +PV++ IWL+RT+YR  VG YIPR TLQAV+
Sbjct  243  PCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVG  302

Query  341  HIYRVLRELDDEAKGEVIEI  360
            HIY+++R+L DE  +EVI++
Sbjct  303  HIYKMVRQL-DEITDEVIQV  321

11) Dd586_1879 in NC_013592


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  260 bits (972),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 155/321 (49%), Positives = 252/321 (79%), Gaps = 3/321 (0%)

Query  39   EMILALTDNGMSKLQALMQLPLSRLSDPFVHAADEVFSEALSLLSTFCLLTISVALLMRI  98
            E+ L+L+D+++ +LQAL+ L++  +  +F  + + + SE+LS+L +F L ++++A+LMR+
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRL  64

Query  99   VGGWIQYGPLFAVEALKIDFNRLNPVNQIKQMFTMRKLTDMLTSILKATTIGLVFWLVVI  158
            V+ W+Q G LFA  ALK+D+N++NP ++ KQMF+ +++ ++L SILKA +IG  + + V 
Sbjct  65   VSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQVK  124

Query  159  PQLEWLVELAYGDLTAFWKGVESVLKSVARttlssllalaILDFGLQKYYFLKQQRMSHE  218
            P L  L+ LA +DLT++W ++  +++ + R  L+ LL +A++DF++QKY+  K+ RMSHE
Sbjct  125  PALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMSHE  184

Query  219  DIRNEFKNSEGDPHMKGHRKSVAQEILNEPASPRAKPNIEDADLLLVNPTHYAVALFYRP  278
            DI++E+K+SEGDPH+KGHR+ +++EILN+ +S+ ++P +E+AD+LLVNPTHYAVAL+YRP
Sbjct  185  DIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNP-VEEADMLLVNPTHYAVALYYRP  243

Query  279  GKTPLPRILLKGEDEQAKALIARAQHANVPVIRFIWLARTLYRVPEGHYIPRHTLQSVAQ  338
              TPLP I  KGEDE+A ALIARA++A +PV++ IWL+RTLYR   G YIPR TLQ+V++
Sbjct  244  CETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVGH  303

Query  339  VYRVLRQLDNDLSQQEIIELD  359
            +Y+++RQLD+    +E+I+++
Sbjct  304  IYKMVRQLDE--ITDEVIQVE  322

12) hrcU in NC_017445


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  258 bits (964),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 169/326 (52%), Positives = 254/326 (78%), Gaps = 6/326 (1%)

Query  42   VVETVLALDDVGMQKLQALMMLPLARIGQPFelalsevvssalvlvaTF--CGLTVAIAA  99
            V E  L+L D ++++LQAL+ L++  I+++F  ++  + S +L ++ +F  C  +V++A 
Sbjct  3    VSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLC--SVGMAM  60

Query  100  LLRIIGGWIQYGPLFAPEALKPDFNRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFY  159
            L+R+++ W+Q G LFAP ALK D+N++NP+++ KQMFS +++ ++L SI+KAVAI + +Y
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  160  LVLTPDLESLARLAYGDLDSFWPAVETLLIHVSRQtlltllvltllDFGLQKYFFIKQQR  219
            + + P L +L  LA +DL ++W A+  L+ H+ R  L  LLV++++DF++QKYF  K+ R
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  220  MSHQDIRDEHKQSEGDPHMKGHRHALAHELLNQPVAAVKSKPVEEADLLLVNPTHYAVAL  279
            MSH+DI+ E KQSEGDPH+KGHR+ L+HE+LNQ  ++  ++PVEEAD+LLVNPTHYAVAL
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQE-PSAAPNPVEEADMLLVNPTHYAVAL  239

Query  280  YYRPELTPLPRIICKGEDGEAKALIARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQ  339
            YYRP  TPLP I CKGED EA ALIARA++A IPV++ IWL+RTLYR++ G+ IPR TLQ
Sbjct  240  YYRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQ  299

Query  340  AVAQVYRVLRQLEDQITDEVIELEAE  365
            AV+++Y+++RQL++ ITDEVI++E E
Sbjct  300  AVGHIYKMVRQLDE-ITDEVIQVEVE  324

13) Ser39006_2922 in NC_022268


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 150/302 (50%), Positives = 235/302 (78%), Gaps = 1/302 (0%)

Query  39   ETILALADRSMGKLQSLMQLPLARLSDPFGHAAEEIFSEALSLLATFCLLTISVAVLLRL  98
            E  L+LAD S+++LQ+L+ L++  +  +F+ + E I SE+LS+L +F L ++++A+L+RL
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRL  64

Query  99   VGGWLQYGPLFAPEALRIDLSRLNPINQFKQMFSMRKLTEMLTNILKASTIGTIFYLVII  158
            V+ W+Q G LFAP AL++D++++NP+++ KQMFS +++ ++L +ILKA +IG+ +Y+ + 
Sbjct  65   VSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQVK  124

Query  159  PDLESLAELSYGDLDGFWHGVAKILHHSarttltallvlsalDFGLQKYFFMKQQRMSHE  218
            P L +L  L+ +DL  +WH++  +++H  R  L  LLV++ +DF++QKYF  K+ RMSHE
Sbjct  125  PALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMSHE  184

Query  219  DLRSEHKDSEGDPHMKGHRKSLANEILNKPATQRPKGKVEDADLLLVNPTHYAVALFYRP  278
            D++ E K+SEGDPH+KGHR+ L++EILN+ ++  P+  VE+AD+LLVNPTHYAVAL+YRP
Sbjct  185  DIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNP-VEEADMLLVNPTHYAVALYYRP  243

Query  279  GKTPLPRILCKGKDDQAKKLITRAHQADIPVIRFVWLARTLYRIPTGNYIPRDTLQAVAQ  338
              TPLP I CKG D++A  LI+RA +A+IPV++ +WL+RTLYR   G+YIPR TLQAV++
Sbjct  244  CETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVGH  303

Query  339  VY  340
            +Y
Sbjct  304  IY  305

14) hrcU in NC_017390


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  249 bits (928),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 164/324 (51%), Positives = 253/324 (79%), Gaps = 6/324 (1%)

Query  39   ETVLALDDVGMQKLQALMRLPLARIGQPFelalsevvssalvlvaTF--CGLTVAIAALL  96
            E  L+L D ++++LQAL+ L++  I+++F  ++  + S +L ++ +F  C  +V++A L+
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLC--SVGMAMLM  62

Query  97   RIIGGWIQYGPLFAPEALKPDFNRLNPINQFKQMFSVKKLSEMFNNIVKAAAISTIFYLV  156
            R+++ W+Q G LFAP ALK D+N++NP+++ KQMFS +++ +++ +I+KA AI++ +Y+ 
Sbjct  63   RLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  157  LTPDLESLARLAYGDLDSFWPAVEvlltrvsrqtlltllvltllDFGLQKYFFIKQQRMS  216
            + P L +L  LA +DL ++W A+  L+ ++ R  L  LLV++++DF++QKYF  K+ RMS
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  217  HQDIRDEHKQSEGDPHMKGHRHALAHELLNQPAAAVKSKPVEEADLLLVNPTHYAVALYY  276
            H+DI+ E KQSEGDPH+KGHR+ L+HE+LNQ ++A  ++PVEEAD+LLVNPTHYAVALYY
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAA-PNPVEEADMLLVNPTHYAVALYY  241

Query  277  RPELTPLPRIICKGEDGEAKALIARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAV  336
            RP  TPLP I CKGED EA ALIARA++A IPV++ IWL+RTLYR++ G+ IPR TLQAV
Sbjct  242  RPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAV  301

Query  337  AQVYRVLRQLEGQINDEVIELEAE  360
            +++Y+++RQL+ +I DEVI++E E
Sbjct  302  GHIYKMVRQLD-EITDEVIQVEVE  324

15) hrcU in NC_012214


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  249 bits (928),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 164/324 (51%), Positives = 253/324 (79%), Gaps = 6/324 (1%)

Query  39   ETVLALDDVGMQKLQALMRLPLARIGQPFelalsevvssalvlvaTF--CGLTVAIAALL  96
            E  L+L D ++++LQAL+ L++  I+++F  ++  + S +L ++ +F  C  +V++A L+
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLC--SVGMAMLM  62

Query  97   RIIGGWIQYGPLFAPEALKPDFNRLNPINQFKQMFSVKKLSEMFNNIVKAAAISTIFYLV  156
            R+++ W+Q G LFAP ALK D+N++NP+++ KQMFS +++ +++ +I+KA AI++ +Y+ 
Sbjct  63   RLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  157  LTPDLESLARLAYGDLDSFWPAVEvlltrvsrqtlltllvltllDFGLQKYFFIKQQRMS  216
            + P L +L  LA +DL ++W A+  L+ ++ R  L  LLV++++DF++QKYF  K+ RMS
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  217  HQDIRDEHKQSEGDPHMKGHRHALAHELLNQPAAAVKSKPVEEADLLLVNPTHYAVALYY  276
            H+DI+ E KQSEGDPH+KGHR+ L+HE+LNQ ++A  ++PVEEAD+LLVNPTHYAVALYY
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAA-PNPVEEADMLLVNPTHYAVALYY  241

Query  277  RPELTPLPRIICKGEDGEAKALIARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAV  336
            RP  TPLP I CKGED EA ALIARA++A IPV++ IWL+RTLYR++ G+ IPR TLQAV
Sbjct  242  RPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAV  301

Query  337  AQVYRVLRQLEGQINDEVIELEAE  360
            +++Y+++RQL+ +I DEVI++E E
Sbjct  302  GHIYKMVRQLD-EITDEVIQVEVE  324

16) hrcU in NC_010694


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  249 bits (928),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 164/324 (51%), Positives = 253/324 (79%), Gaps = 6/324 (1%)

Query  39   ETVLALDDVGMQKLQALMRLPLARIGQPFelalsevvssalvlvaTF--CGLTVAIAALL  96
            E  L+L D ++++LQAL+ L++  I+++F  ++  + S +L ++ +F  C  +V++A L+
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLC--SVGMAMLM  62

Query  97   RIIGGWIQYGPLFAPEALKPDFNRLNPINQFKQMFSVKKLSEMFNNIVKAAAISTIFYLV  156
            R+++ W+Q G LFAP ALK D+N++NP+++ KQMFS +++ +++ +I+KA AI++ +Y+ 
Sbjct  63   RLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  157  LTPDLESLARLAYGDLDSFWPAVEvlltrvsrqtlltllvltllDFGLQKYFFIKQQRMS  216
            + P L +L  LA +DL ++W A+  L+ ++ R  L  LLV++++DF++QKYF  K+ RMS
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  217  HQDIRDEHKQSEGDPHMKGHRHALAHELLNQPAAAVKSKPVEEADLLLVNPTHYAVALYY  276
            H+DI+ E KQSEGDPH+KGHR+ L+HE+LNQ ++A  ++PVEEAD+LLVNPTHYAVALYY
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAA-PNPVEEADMLLVNPTHYAVALYY  241

Query  277  RPELTPLPRIICKGEDGEAKALIARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAV  336
            RP  TPLP I CKGED EA ALIARA++A IPV++ IWL+RTLYR++ G+ IPR TLQAV
Sbjct  242  RPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAV  301

Query  337  AQVYRVLRQLEGQINDEVIELEAE  360
            +++Y+++RQL+ +I DEVI++E E
Sbjct  302  GHIYKMVRQLD-EITDEVIQVEVE  324

17) rscU in NC_012660


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  246 bits (917),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 159/311 (52%), Positives = 248/311 (80%), Gaps = 0/311 (0%)

Query  40   ISEIALFTAETSLQRFQQLMLLPLSRLTQPFTRALEEVLFEGMTVFFSFALLMVGVAITT  99
            +SEI+L  A+ S++R+Q L+ L++  + ++F+ ++E +  EG++V++SF+L  VG+A+  
Sbjct  3    VSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLM  62

Query  100  KLISSWMQFGLLFAPETLKLDFNRLNPISQVKQMFSAQQLMNLLMSIAKACLIASILYVV  159
            +L+S+WMQ+G+LFAP +LKLD+N++NP+S+ KQMFS+Q+++NLL+SI KA  I++ LY+ 
Sbjct  63   RLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  160  IWPSLGTLINLATSDLQSYILALIALFRhllhvclgmllvlalIDLIMVRHFFAKRMRMT  219
            + P+LG+LI LA SDL +Y  AL+ LFRH+L+V LG+LLV+A++D+ M + F AK++RM+
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  220  QVEVVKEYKDMEGDPHVKGQRRSLAYQLAQeepkvklpkleeSDMLVVNPTHFAVALYYR  279
            + ++ KEYK+ EGDPHVKG+RR L+ ++ ++EP      +EE+DML+VNPTH+AVALYYR
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALYYR  242

Query  280  PGKTPLPMLVSKGTDDEARTLIRRAKAADVPVIQCVWLARTLYTKKLGASIPRETLRAVA  339
            P  TPLP++  KG D+EA +LI RAK A++PV++ +WL+RTLY  K+G  IPR TL+AV+
Sbjct  243  PCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVG  302

Query  340  LIYRTLRELDD  350
             IY+ +R+LD+
Sbjct  303  HIYKMVRQLDE  313

18) H045_00205 in NC_020209


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  239 bits (892),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 160/312 (52%), Positives = 248/312 (80%), Gaps = 0/312 (0%)

Query  39   AISEIALFTAETSLQRFQQLMRLPLSSMAQPFTRALEEVLFEGLTVFFSFALLMVATAIL  98
             +SEI+L  A+ S++R+Q L+ L++ ++ ++F+ ++E +  EGL+V++SF+L  V+ A+L
Sbjct  2    VVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAML  61

Query  99   MKLISSWMQFGLLFAPETLKLDFNRLNPLKQLKQMFSAQSVMNLLMSIAKALLLGMVVYL  158
            M+L+S+WMQ+G+LFAP +LKLD+N++NP+ + KQMFS+Q+++NLL+SI KA+ +G  +Y+
Sbjct  62   MRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYM  121

Query  159  VIRPSLGTLINLASSDLQTYILALIAlfryllhaclalllvlalidlvlQKHFFAKRMRM  218
             ++P+LG+LI LA+SDL TY  AL+ LFR +L+  L+LLLV+A++D+ +QK F AK++RM
Sbjct  122  QVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRM  181

Query  219  TQVEVVKEYKDMEGDPHVKGKRRALAQELAQeepkvklpkleeSDMLVVNPTHFAVALYY  278
            ++ ++ KEYK+ EGDPHVKG RR L++E+ ++EP      +EE+DML+VNPTH+AVALYY
Sbjct  182  SHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALYY  241

Query  279  RPGKTPLPVLVNKGTDDEARELIRQAKAAEVPVIQCVWLARTLYTHKLGAGIPRETLQAV  338
            RP  TPLP++  KG D+EA  LI +AK A +PV++ +WL+RTLY  K+G  IPR TLQAV
Sbjct  242  RPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAV  301

Query  339  ALIYRTLRELDD  350
            + IY+ +R+LD+
Sbjct  302  GHIYKMVRQLDE  313

19) Marme_1068 in NC_015276


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  237 bits (884),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 138/304 (46%), Positives = 225/304 (75%), Gaps = 3/304 (0%)

Query  46   DSGVRNLEKLTSIPLSMINQPFQYALQATVVNCLTIAASMVMMALGIAVLFRLLGGWLQF  105
            D +V  L+ L ++++  I+++F  +++    + L++  S  + ++G+A+L RL++ W+Q+
Sbjct  12   DDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRLVSNWMQI  71

Query  106  GFLIAPEALKIDFNRLNPFSQLKNMFSGKKLFELFNSFIKAITIGVVMYFILTPILPSLG  165
            GFL+AP ALK+D+N++NPFS+ K+MFSG+++++L+ S++KA++IG  +Y  + P L +L 
Sbjct  72   GFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQVKPALGALI  131

Query  166  KLALTDLDTTWRGIAELFLKVERACVGVLIVIASIDFGMQKYFHFKSLKMSKDDVKQEYK  225
             LA +DL T W+++ ELF  + R  +G+L+V+A +DF+MQKYFH K L+MS +D+K+EYK
Sbjct  132  LLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMSHEDIKKEYK  191

Query  226  NQEGDPHLKGQRKSEAVRLATeepspapsakpeLGEADTLVVNPTHFAVALYYRSEETPL  285
            + EGDPH+KG+R+  +          +++A   + EAD L+VNPTH+AVALYYR+ ETPL
Sbjct  192  QSEGDPHVKGHRRQLS---HEILNQEPSAAPNPVEEADMLLVNPTHYAVALYYRPCETPL  248

Query  286  PKILTKGQDQDALDLIEQAKEKGIPVIRFIWLARTLYKEQEGHYIPRTTLRYVAKIYQVL  345
            P I  KG+D++AL LI +AK+ GIPV++ IWL+RTLY+ + G YIPR TL+ V+ IY+++
Sbjct  249  PLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAVGHIYKMV  308

Query  346  GELD  349
             +LD
Sbjct  309  RQLD  312

20) hrcU in NC_004547


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  231 bits (862),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 162/323 (51%), Positives = 247/323 (77%), Gaps = 7/323 (2%)

Query  39   ECVLALADSTMGKLQTLVQLPLQRLGTPFAQVAKEVFHD--AAVLAGTLCLLSAAIAVLL  96
            E  L+LAD ++++LQ+L+ L+++ ++ +FA     +  +  + +L+ TLC  S ++A+L+
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLC--SVGMAMLM  62

Query  97   RIAGGWLQYGPLFAPEALKLDLNRLNPINQFKQMFSMRKLVEMLTNILKAVVIGTVFYKv  156
            R+ + W+Q G LFAP ALKLD+N++NP+++ KQMFS ++++++L +ILKAV IG+ +Y  
Sbjct  63   RLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  157  vvpelealvelaYGDLHGFWQGVKalltritrttltallvlsalDFGMQKYFFLKQQRMS  216
            V P L AL+ LA +DL  +W+++  L+ +I R  L  LLV++ +DF+MQKYF  K+ RMS
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  217  HEDLRNEHKDSEGDPHMKGHRKSLAHELANESAAPRPKPKLEDADMLLVNPTHYAVGLYY  276
            HED+++E K+SEGDPH+KGHR+ L+HE+ N+ +++ P+P +E+ADMLLVNPTHYAV+LYY
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNP-VEEADMLLVNPTHYAVALYY  241

Query  277  RPGKTPLPRILFKGENKAAQELIAQAKKAGIPVIRFIWLTRTLYRTTPEGHYIPRETLQA  336
            RP  TPLP I  KGE+  A  LIA+AK+AGIPV++ IWLTRTLYR+   G YIPR TLQA
Sbjct  242  RPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKV-GKYIPRPTLQA  300

Query  337  VAQVYRVLRQLEDEQKRDIIEME  359
            V+++Y+++RQL DE   ++I++E
Sbjct  301  VGHIYKMVRQL-DEITDEVIQVE  322

21) D781_3935 in NC_020064


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  229 bits (855),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 145/296 (49%), Positives = 228/296 (78%), Gaps = 3/296 (1%)

Query  66   PFGHAMEEVLSDSLLVLALFSAIVCSIALLLRVLGGWIQFGPLFSVEALLPKPESLNPVN  125
            +F+ ++E + S++L VL  F+    ++A+L+R+++ W+Q+G LF+  AL    + +NP +
Sbjct  32   SFAASVELIASEGLSVLLSFTLCSVGMAMLMRLVSNWMQIGFLFAPKALKLDINKINPFS  91

Query  126  HFKNMFSGRQMAQLLTSIIKAAAIGLVLWLSLAPEMGNLARLAQSTLDGFWHGVLQLFIS  185
            H K+MFSG+++ +LL SI+KA AIG  L + + P +G L  LA+S L  +WH++++LF  
Sbjct  92   HAKQMFSGQNILNLLLSILKAVAIGATLYMQVKPALGALILLANSDLTTYWHALVELFRH  151

Query  186  CarrvllvllalSLMDFGVQRFFFLKQQRMSHEDIRNEYKQNEGDPHMKGHRRQVAQDIL  245
              R +L +LL ++++DF++Q++F  K+ RMSHEDI++EYKQ+EGDPH+KGHRRQ++++IL
Sbjct  152  ILRVILGLLLVVAMVDFAMQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQLSHEIL  211

Query  246  NEEPSAARNVAVEEADVLLVNPTHYAVGLYYRPGETPLPRLVFKAHGDDAHYLVDQAQRA  305
            N+EPSAA N +VEEAD+LLVNPTHYAV+LYYRP ETPLP +  K+++++A  L+ +A+ A
Sbjct  212  NQEPSAAPN-PVEEADMLLVNPTHYAVALYYRPCETPLPLIHCKGEDEEALALIARAKNA  270

Query  306  HIPVVRYIWLTRTLYRTTPEGSWIPRETLKAVAQVYRLLRELEDSYLNEVIELEEE  361
             IPVV+ IWLTRTLYR+   G  IPR TL+AV+++Y+++R+L++   +EVI++E E
Sbjct  271  GIPVVHSIWLTRTLYRAKV-GKYIPRPTLQAVGHIYKMVRQLDEI-TDEVIQVEVE  324

22) PC1_2215 in NC_012917


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  220 bits (818),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 159/321 (50%), Positives = 248/321 (78%), Gaps = 3/321 (0%)

Query  39   ECVLALADSTMGKLQTLVQLPLQRLDAPFAQVAKEVFHDAAVLAGTlcllaaaiavllRI  98
            E  L+LAD ++++LQ+L+ L+++ +D +FA     +  ++  +  ++ L + ++A+L+R+
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRL  64

Query  99   VGGWIQYGPLFAPEALKLDLNRLNPINQFKQMFSMRKLVEMLTNILKAVVIGTVFYKvvv  158
            V+ W+Q G LFAP ALKLD+N++NP+++ KQMFS ++++++L +ILKAV IG+ +Y  V 
Sbjct  65   VSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQVK  124

Query  159  pelealvelaYGDLHGFWQGVKalltriarttltallvlsalDFGLQKYFFLKQQRMSHE  218
            P L AL+ LA +DL  +W+++  L+ +I R  L  LLV++ +DF++QKYF  K+ RMSHE
Sbjct  125  PALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMSHE  184

Query  219  DLRNEHKDSEGDPHMKGHRKSLAHELMNEPAAPRPKAKVEDADMLLVNPTHYAVGLYYRP  278
            D+++E K+SEGDPH+KGHR+ L+HE++N+ +++ P++ VE+ADMLLVNPTHYAV+LYYRP
Sbjct  185  DIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNP-VEEADMLLVNPTHYAVALYYRP  243

Query  279  GKTPLPRILFKGEDSAAQELIAQAKKADIPVIRFIWLTRTLYRTTPEGQYIPRETLQAVA  338
              TPLP I  KGED  A  LIA+AK+A+IPV++ IWLTRTLYR+   G+YIPR TLQAV+
Sbjct  244  CETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKV-GKYIPRPTLQAVG  302

Query  339  QVYRVLRQLEDEQKRDIIEME  359
            ++Y+++RQL DE   ++I++E
Sbjct  303  HIYKMVRQL-DEITDEVIQVE  322

23) PCC21_022940 in NC_018525


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  215 bits (799),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 157/323 (49%), Positives = 245/323 (76%), Gaps = 7/323 (2%)

Query  39   ECVLALADSTMGKLQTLVQLPLQRLDAPFAQVAKEVFHD--AAVLAGTLCllaaaiavll  96
            E  L+LAD ++++LQ+L+ L+++ +D +FA     +  +  + +L+ TLC ++ A+ + L
Sbjct  5    EITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRL  64

Query  97   rvvGGWLQYGPLFAPEALNLDLNRLNPINQFKQMFSMRKLVEMLTNILKAVVIGTVFYKv  156
               + W+Q G LFAP AL+LD+N++NP+++ KQMFS ++++++L +ILKAV IG+ +Y  
Sbjct  65   V--SNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQ  122

Query  157  vvpelealvelaYGDLHGFWQGVKallmrvarttltallvlsalDFGLQKYFFLKQQRMS  216
            V P L AL+ LA +DL  +W+++  L+ ++ R  L  LLV++ +DF++QKYF  K+ RMS
Sbjct  123  VKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRMS  182

Query  217  HEDLRNEHKDSEGDPHMKGHRKSLAHELMNEPAAPRPKAKVEDADMLLVNPTHYAVGLYY  276
            HED+++E K+SEGDPH+KGHR+ L+HE++N+ +++ P++ VE+ADMLLVNPTHYAV+LYY
Sbjct  183  HEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNP-VEEADMLLVNPTHYAVALYY  241

Query  277  RPGKTPLPRILFKGEDRAAQELIAQAQKADIPVIRFIWLTRTLYRTTPEGHYIPRETLQA  336
            RP  TPLP I  KGED  A  LIA+A++A+IPV++ IWLTRTLYR+   G YIPR TLQA
Sbjct  242  RPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKV-GKYIPRPTLQA  300

Query  337  VAQVYRVLRQLEDEQKRDIIEME  359
            V+++Y+++RQL DE   ++I++E
Sbjct  301  VGHIYKMVRQL-DEITDEVIQVE  322

24) rscU in NC_017911


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  204 bits (760),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 161/312 (52%), Positives = 246/312 (79%), Gaps = 0/312 (0%)

Query  39   AISEVALFTAETSLQRFQQLMVFPMSRLSQPFvrvleevlveglvMFFSFSLLMAGLAIA  98
             +SE++L  A+ S++R+Q L+ ++   + ++F   +E +  EGL +++SF+L   G+A+ 
Sbjct  2    VVSEITLGLADDSVDRLQALLALSFKGIDRSFAASVELIASEGLSVLLSFTLCSVGMAML  61

Query  99   AKLIGSWMQFGLLFAPQTLKLDFNRLNPISQIKQMFSAQSLMNLLMSIAKAFLLGLIVYV  158
             +L+++WMQ+G+LFAP++LKLD+N++NP+S+ KQMFS+Q+++NLL+SI KA  +G  +Y+
Sbjct  62   MRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLYM  121

Query  159  VVWPSLGALINLANSDLQSYllalialfrhllhaclglllvlalidltlQKHFFAKRMRM  218
             V P+LGALI LANSDL +Y  AL+ LFRH+L+  LGLLLV+A++D+++QK F AK++RM
Sbjct  122  QVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLRM  181

Query  219  TQVEVVKEYKDMEGDPHVKGqrrqlaqqlaqeepkvklpkleeADMLVVNPTHFAVALYY  278
            ++ ++ KEYK+ EGDPHVKG+RRQL++++ ++EP      +EEADML+VNPTH+AVALYY
Sbjct  182  SHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALYY  241

Query  279  RPGKTPLPLLISKGTDDEARKLIARAKAAEVPVIQCVWLARTIYTKKLGASIPREALQAV  338
            RP  TPLPL+  KG D+EA  LIARAK A +PV++ +WL+RT+Y  K+G  IPR +LQAV
Sbjct  242  RPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRAKVGKYIPRPTLQAV  301

Query  339  ALIYRTLRELDD  350
            + IY+ +R+LD+
Sbjct  302  GHIYKMVRQLDE  313

25) hrcU in NC_014323


> AF069652|3|G3|3603323|AAC35808.1|Pseudomonas_syringae_Race_4|-|848..1825|hrcU|-|hrp 
type III pathway protein
Length=325

 Score =  154 bits (568),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 110/266 (42%), Positives = 195/266 (74%), Gaps = 6/266 (2%)

Query  96   LAAVVGHWGQFGMLIATEALEPKLDKLNPVNGIKQIFSKKKLVELFITVGKAALIAGMMY  155
            L  +V++W Q+G L+A  AL   ++K+NP +  KQ+FS +++++L++++ KA  I++ +Y
Sbjct  61   LMRLVSNWMQIGFLFAPKALKLDINKINPFSHAKQMFSGQNILNLLLSILKAVAIGATLY  120

Query  156  SAIHSQLGAIFTLAGGEPKDVYEAFVTLLRNIFHliivvclvlgviDYAVQKYFHKKDLM  215
              + + LGA++ LA ++     +A+V L+R+I+++I+ + LV++++D+A+QKYFH K L 
Sbjct  121  MQVKPALGALILLANSDLTTYWHALVELFRHILRVILGLLLVVAMVDFAMQKYFHAKKLR  180

Query  216  MDQEEIKREFKESEGDPMVKGQRKQLARQWANEAPAAK---TEKANAVVVNPTHFAVAMF  272
            M +E+IK+E+K+SEGDP VKG+R+QL+++  N+ P+A     E A+ ++VNPTH+AVA++
Sbjct  181  MSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPSAAPNPVEEADMLLVNPTHYAVALY  240

Query  273  YDADEAMVPLVLAKGRDEIAQAMIARAHACGIPVIRHVWLARTLYATCQDDMPVPRSSyq  332
            Y + E+ +PL+  KG DE A A+IARA   GIPV++ +WL+RTLY + + +  +PR++ Q
Sbjct  241  YRPCETPLPLIHCKGEDEEALALIARAKNAGIPVVHSIWLTRTLYRA-KVGKYIPRPTLQ  299

Query  333  avaqvyavvHEL--VASGEVQREVEL  356
            AV+++Y +V++L  ++   +Q EVEL
Sbjct  300  AVGHIYKMVRQLDEITDEVIQVEVEL  325