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Homologs of hrpE gene of AF069651

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HrpE
( YP_234289.1 )

type III secretion protein HrpE

NC_007005
(Pseudomonas syringae B728a)

4e-67

2) hrpE
( YP_273536.1 )

type III secretion component protein HrpE

NC_005773
(Pseudomonas syringae 1448A)

2e-66

3) hrpE
( NP_791213.1 )

type III secretion protein HrpE

NC_004578
(Pseudomonas syringae DC3000)

4e-54

4) Pmen_0026
( YP_001185533.1 )

HrpE/YscL family type III secretion apparatus protein

NC_009439
(Pseudomonas mendocina ymp)

8e-26

• Sequence Alignments

1) HrpE in NC_007005


> AF069651|3|G3|3603317|AAC35803.1|Pseudomonas_syringae_Race_4|+|1396..1977|hrpE|-|putative 
hrp type III secretion pathway 
protein
Length=193

 Score =  247 bits (921),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 153/188 (82%), Positives = 173/188 (93%), Gaps = 0/188 (0%)

Query  1    MLAKRSITLTADAVLPEPVLRREYIANSLLARDILTDAQRQAEQMLVLEQAKADRRHQEA  60
            MLAKRSITLTA A+LPEPVLRRE IANSLLARD+L+DAQRQAEQMLVLEQ KAD  HQ+A
Sbjct  1    MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQA  60

Query  61   LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALSQLLDETTLAERARALVRNLAA  120
            LA FWE ANAFL EL+VQRE LQQQAM+AVEELL+E+L +LLD+TTLAERA+ALV+NLA+
Sbjct  61   LASFWENANAFLAELQVQREVLQQQAMAAVEELLSESLRHLLDDTTLAERAKALVKNLAG  120

Query  121  SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWALKRDATLATESLRLSDANGAFEIDWA  180
            SQLNEAVA LSVHP+MAEPVAEWLA+SRFA+ W LKRDA+L TE LRL+DANGAF+IDWA
Sbjct  121  SQLNEAVANLSVHPDMAEPVAEWLADSRFAQYWQLKRDASLNTERLRLNDANGAFDIDWA  180

Query  181  TLRNGLAG  188
            TLR+GLAG
Sbjct  181  TLRSGLAG  188

2) hrpE in NC_005773


> AF069651|3|G3|3603317|AAC35803.1|Pseudomonas_syringae_Race_4|+|1396..1977|hrpE|-|putative 
hrp type III secretion pathway 
protein
Length=193

 Score =  244 bits (912),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 186/193 (97%), Positives = 190/193 (99%), Gaps = 0/193 (0%)

Query  1    MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQA  60
            MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQA
Sbjct  1    MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQA  60

Query  61   LASFWENANAFLaelqvqrevlqqqaMAAVeellseslRHLLDDTTLAERARALVKNLAA  120
            LASFWENANAFLAELQVQREVLQQQAMAAVEELLSESLRHLLDDTTLAERA+ALVKNLA+
Sbjct  61   LASFWENANAFLAELQVQREVLQQQAMAAVEELLSESLRHLLDDTTLAERAKALVKNLAG  120

Query  121  SQLNEAVATLSVHPDMAEPVAEWLADSRFAQYWQLKRDASLTTERLRLSDANGAFDIDWA  180
            SQLNEAVA LSVHPDMAEPVAEWLADSRFAQYWQLKRDASL TERLRL+DANGAFDIDWA
Sbjct  121  SQLNEAVANLSVHPDMAEPVAEWLADSRFAQYWQLKRDASLNTERLRLNDANGAFDIDWA  180

Query  181  TLRNGLAGRDSSA  193
            TLR+GLAGR SSA
Sbjct  181  TLRSGLAGRYSSA  193

3) hrpE in NC_004578


> AF069651|3|G3|3603317|AAC35803.1|Pseudomonas_syringae_Race_4|+|1396..1977|hrpE|-|putative 
hrp type III secretion pathway 
protein
Length=193

 Score =  203 bits (756),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 143/188 (77%), Positives = 173/188 (93%), Gaps = 0/188 (0%)

Query  1    MLAKRSIALTAATLLREPILRREDIADSLLARDILADARQQATQILALEQEKAEHLQQQA  60
            MLAKRSI+LTA++LL EP+LRREDIA+SLLARD+LADA++QA Q+L LEQ+KA+ ++QQA
Sbjct  1    MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQA  60

Query  61   LAQFWENANAFLGELQVQREALQEQAMTAVeellseslRHLLDDTTlaeraralarnlaa  120
            LA FWENANAFL+ELQVQRE LQ+QAM+AVEELLSESLRHLLDDTTLAERA+AL +NLA+
Sbjct  61   LASFWENANAFLAELQVQREVLQQQAMAAVEELLSESLRHLLDDTTLAERAKALVKNLAG  120

Query  121  SQLNEAVATLSVHPQIADAVAEWLADSRFSEHWQLKRDATIASDSLRLSDANGAFDIAWA  180
            SQLNEAVA LSVHP++A++VAEWLADSRF++ WQLKRDA++ ++ LRL+DANGAFDI WA
Sbjct  121  SQLNEAVANLSVHPDMAEPVAEWLADSRFAQYWQLKRDASLNTERLRLNDANGAFDIDWA  180

Query  181  DLRKGLLG  188
             LR GL G
Sbjct  181  TLRSGLAG  188

4) Pmen_0026 in NC_009439


> AF069651|3|G3|3603317|AAC35803.1|Pseudomonas_syringae_Race_4|+|1396..1977|hrpE|-|putative 
hrp type III secretion pathway 
protein
Length=193

 Score =  109 bits (398),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 133/186 (72%), Gaps = 1/186 (0%)

Query  1    MLTKRRFTL-GSAVLEEPILRRQLLAESlradellaqarlqaeqllqqaheqrqHYLDEA  59
            ML+KR +TL ++A+L EP+LRR+ +A+SL A ++LA+A+ QAEQ+L   +++ +   ++A
Sbjct  1    MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQA  60

Query  60   VARFWSEANALLQAIQEERASYQRDALSAVDSLLNIALSRLLDETDLPQRISALLRNLVV  119
            +A FW +ANA+L  +Q +R   Q++A++AV+ LL+ +L +LLD+T L++R  AL++NL  
Sbjct  61   LASFWENANAFLAELQVQREVLQQQAMAAVEELLSESLRHLLDDTTLAERAKALVKNLAG  120

Query  120  GLPSKAEANLACHPEAASTVRAWLQTMGFDALWQVQEDPGMAPESLRLSNTLGTFHIDWP  179
            +  + A ANL+ HP+ A  V  WL    F   WQ++ D+++  E LRL+++ G+F+IDW+
Sbjct  121  SQLNEAVANLSVHPDMAEPVAEWLADSRFAQYWQLKRDASLNTERLRLNDANGAFDIDWA  180

Query  180  SLRRGL  185
            +LR GL
Sbjct  181  TLRSGL  186