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PAthogenisity Island DataBase (PAI DB)

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Homologs of CDBH8_0930 gene of NC_016800_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CD31A_0968
( YP_005157674.1 )

transposase-like protein

NC_016799
(Corynebacterium diphtheriae 31A)

8e-39

100

2) CDBH8_0930
( YP_005160022.1 )

transposase-like protein

NC_016800
(Corynebacterium diphtheriae BH8)

8e-39

100

3) CDBH8_2105
( YP_005161187.1 )

transposase-like protein

NC_016800
(Corynebacterium diphtheriae BH8)

2e-29

4) ROP_pROB01-01520
( YP_002776503.1 )

putative transposase

NC_012520
(Rhodococcus opacus B4)

1e-12

5) S1911
( NP_837421.1 )

IS629 orfB

NC_004741
(Shigella flexneri 2457T)

2e-09

6) SSON_3593
( YP_312380.1 )

IS629 ORF2

NC_007384
(Shigella sonnei Ss046)

4e-08

7) SSON53_21485
( YP_005458789.1 )

putative transposase

NC_016822
(Shigella sonnei 53G)

6e-08

8) SSON_3610
( YP_312396.1 )

IS629 ORF2

NC_007384
(Shigella sonnei Ss046)

6e-08

9) Atc_0502
( YP_004747852.1 )

integrase catalytic subunit

NC_015850
(Acidithiobacillus caldus SM-1)

2e-06

• Sequence Alignments

1) CD31A_0968 in NC_016799


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score =  153 bits (564),  Expect = 8e-39, Method: Compositional matrix adjust.
 Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)

Query  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60
           MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY
Sbjct  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60

Query  61  VVFVIDVFIREILAYVVDTRATKSLVIRTLSRLG  94
           VVFVIDVFIREILAYVVDTRATKSLVIRTLSRLG
Sbjct  61  VVFVIDVFIREILAYVVDTRATKSLVIRTLSRLG  94

2) CDBH8_0930 in NC_016800


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score =  153 bits (564),  Expect = 8e-39, Method: Compositional matrix adjust.
 Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)

Query  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60
           MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY
Sbjct  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60

Query  61  VVFVIDVFIREILAYVVDTRATKSLVIRTLSRLG  94
           VVFVIDVFIREILAYVVDTRATKSLVIRTLSRLG
Sbjct  61  VVFVIDVFIREILAYVVDTRATKSLVIRTLSRLG  94

3) CDBH8_2105 in NC_016800


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 79/92 (86%), Positives = 81/92 (89%), Gaps = 0/92 (0%)

Query  1   MNILGIAGVLrrtttrttVADPTAQRFLVRIQRAWLQGQRPDQWWVADFMYVHTSCGFSY  60
           M ILGIAGVLRR TTRTTVADPTAQRFLVRIQRAW QGQRPDQWWVADF YVH SCGFSY
Sbjct  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60

Query  61  VAFVTDVFTREILAYVVDTRATTCLVIRALRQ  92
           V FV DVF REILAYVVDTRAT  LVIR+L +
Sbjct  61  VVFVIDVFIREILAYVVDTRATKSLVIRTLSR  92

4) ROP_pROB01-01520 in NC_012520


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score = 66.3 bits (232),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 43/94 (46%), Positives = 54/94 (58%), Gaps = 1/94 (1%)

Query  1   MTMAGITGAVRGRHRIVTTRSDDTAPRHPALIGRAWSTPTHPAQWWVADFTYTWTLSGFC  60
           MT+ GI+G +R R    TT +D TA R    I RAWS   +P QWWVADFTY     GF 
Sbjct  1   MTILGIAGVLR-RKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFS  59

Query  61  YTAFCVDVFSRRILGWRVMTSKSTPLVTSVLEQV  94
           Y  F +DVF R IL+  V T  + +LV   L ++
Sbjct  60  YVVFVIDVFIREILAYVVDTRATKSLVIRTLSRL  93

5) S1911 in NC_004741


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score = 55.5 bits (191),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 38/92 (42%), Positives = 58/92 (64%), Gaps = 2/92 (2%)

Query  1   MAVMGLAGVLRGKKVRTTISRKAVAA-GDRVNRQFV-AERPDQLWVADFTYVSTWRGFVY  58
           M+++G+AGVLR K  RTT++  +      R++R    ++RPDQ WVADFTYV    GF Y
Sbjct  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60

Query  59  VAFIIDVFAGYIVGWRVSSSMETTFVLDALEQ  90
           V F+IDVF   I++  V +    ++V+ +L +
Sbjct  61  VVFVIDVFIREILAYVVDTRATKSLVIRTLSR  92

6) SSON_3593 in NC_007384


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 46/68 (68%), Gaps = 2/68 (2%)

Query  17  MAVMGLAGVLRGKKVRTTISRKAVAA-GDRVNRQFV-AERPDQLWVADFTYVSTWQGFVY  74
           M+++G+AGVLR K  RTT++  +      R++R    ++RPDQ WVADFTYV    GF Y
Sbjct  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60

Query  75  VAFIIDVF  82
           V F+IDVF
Sbjct  61  VVFVIDVF  68

7) SSON53_21485 in NC_016822


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score = 50.8 bits (173),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 35/68 (52%), Positives = 45/68 (67%), Gaps = 2/68 (2%)

Query  24  MAVMGLVGVLRGKKVRTTVSRKTVAA-GDRVNRQ-FVAERPDQLWVADFTYVSTWQGFVY  81
           M+++G+ GVLR K  RTTV+  T      R++R    ++RPDQ WVADFTYV    GF Y
Sbjct  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60

Query  82  VAFIIDVF  89
           V F+IDVF
Sbjct  61  VVFVIDVF  68

8) SSON_3610 in NC_007384


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score = 50.8 bits (173),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 35/68 (52%), Positives = 45/68 (67%), Gaps = 2/68 (2%)

Query  24  MAVMGLVGVLRGKKVRTTVSRKTVAA-GDRVNRQ-FVAERPDQLWVADFTYVSTWQGFVY  81
           M+++G+ GVLR K  RTTV+  T      R++R    ++RPDQ WVADFTYV    GF Y
Sbjct  1   MTILGIAGVLRRKTTRTTVADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSY  60

Query  82  VAFIIDVF  89
           V F+IDVF
Sbjct  61  VVFVIDVF  68

9) Atc_0502 in NC_015850


> NC_016800_R1|29|G29|376287456|YP_005160022.1|Corynebacterium_diphtheriae_BH8|+|30028..30312|-|CDBH8_0930|transposase-like 
protein
Length=94

 Score = 46.1 bits (155),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 30/74 (41%), Positives = 48/74 (65%), Gaps = 1/74 (1%)

Query  1   MSNPLTPCTLDRVKRQFT-AERPNQLWVPDFTYVSTWQGWVYVAFVIDVFARSIVAWRVS  59
           +++P +   L R++R  + ++RP+Q WV+DFTYV    G  YV FVIDVF R I+A  V 
Sbjct  19  VADPTAQRFLVRIQRAWSQGQRPDQWWVADFTYVHISCGFSYVVFVIDVFIREILAYVVD  78

Query  60  RSMTTNFVLDALGQ  73
              T ++V+ +L++
Sbjct  79  TRATKSLVIRTLSR  92