Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
VirB7 type IV secretion protein |
NC_011498 (Helicobacter pylori P12) |
1e-12 |
100 |
|
Comb7 competence protein |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
0.065 |
54 |
|
putative comB7 lipoprotein |
NC_017374 (Helicobacter pylori 2017) |
0.26 |
47 |
|
putative lipoprotein |
NC_017381 (Helicobacter pylori 2018) |
0.26 |
47 |
|
comB7 putative lipoprotein |
NC_017357 (Helicobacter pylori 908) |
0.26 |
47 |
|
Comb7 competence protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
0.26 |
47 |
|
Comb7 competence protein |
NC_017742 (Helicobacter pylori PeCan18) |
0.26 |
47 |
|
putative lipoprotein |
NC_022130 (Helicobacter pylori SouthAfrica20) |
0.26 |
47 |
|
Comb7 competence protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
0.26 |
47 |
|
comB7 putative lipoprotein |
NC_019563 (Helicobacter pylori Aklavik86) |
0.30 |
50 |
|
comB7 lipoprotein |
NC_017355 (Helicobacter pylori v225d) |
0.36 |
47 |
|
comB7 putative lipoprotein |
NC_017740 (Helicobacter pylori Shi169) |
0.45 |
47 |
|
comB7 putative lipoprotein |
NC_019560 (Helicobacter pylori Aklavik117) |
0.77 |
44 |
|
comB7 putative lipoprotein |
NC_017379 (Helicobacter pylori Puno135) |
0.77 |
44 |
|
hypothetical protein |
NC_021215 (Helicobacter pylori UM032) |
0.89 |
50 |
|
hypothetical protein |
NC_021882 (Helicobacter pylori UM298) |
0.89 |
50 |
|
hypothetical protein |
NC_021216 (Helicobacter pylori UM299) |
0.89 |
50 |
|
Comb7 competence protein |
NC_017362 (Helicobacter pylori Lithuania75) |
0.83 |
47 |
|
hypothetical protein |
NC_017382 (Helicobacter pylori 51) |
0.90 |
50 |
|
comB7 putative lipoprotein |
NC_017354 (Helicobacter pylori 52) |
0.90 |
50 |
|
hypothetical protein |
NC_014256 (Helicobacter pylori B8) |
0.91 |
44 |
|
Comb7 competence protein |
NC_017063 (Helicobacter pylori ELS37) |
0.91 |
44 |
|
comB7 putative lipoprotein |
NC_008086 (Helicobacter pylori HPAG1) |
0.91 |
44 |
|
Comb7 competence protein |
NC_017733 (Helicobacter pylori HUP-B14) |
0.91 |
44 |
|
Comb7 competence protein |
NC_011498 (Helicobacter pylori P12) |
0.91 |
44 |
|
Comb7 competence protein |
NC_017376 (Helicobacter pylori Santal49) |
0.91 |
44 |
|
Comb7 competence protein |
NC_014560 (Helicobacter pylori SJM180) |
0.91 |
44 |
|
hypothetical protein |
NC_021217 (Helicobacter pylori UM037) |
0.91 |
44 |
|
comB7 putative lipoprotein |
NC_017359 (Helicobacter pylori Sat464) |
0.99 |
45 |
|
comB7 putative lipoprotein |
NC_010698 (Helicobacter pylori Shi470) |
0.99 |
45 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011498_P1' AND ph.id_pai_orf='29' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc