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Homologs of hrcJ gene of NC_004578_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcJ
( NP_791211.1 )

type III secretion protein HrcJ

NC_004578
(Pseudomonas syringae DC3000)

3e-101

100

2) hrcJ
( YP_273534.1 )

type III secretion component protein HrcJ

NC_005773
(Pseudomonas syringae 1448A)

1e-96

3) HrcJ
( YP_234287.1 )

type III secretion protein HrcJ

NC_007005
(Pseudomonas syringae B728a)

1e-95

4) Pmen_0028
( YP_001185535.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009439
(Pseudomonas mendocina ymp)

3e-74

5) hrcJ
( YP_005210956.1 )

protein HrcJ

NC_016830
(Pseudomonas fluorescens F113)

9e-65

6) PSEBR_a5370
( YP_004356878.1 )

type III secretion protein

NC_015379
(Pseudomonas brassicacearum NFM421)

4e-64

7) rscJ
( YP_006322242.1 )

type III secretion apparatus lipoprotein RscJ

NC_017911
(Pseudomonas fluorescens A506)

8e-64

8) rscJ
( YP_002870391.1 )

putative type III secretion protein

NC_012660
(Pseudomonas fluorescens SBW25)

5e-62

9) Marme_1087
( YP_004312198.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_015276
(Marinomonas mediterranea MMB-1)

4e-57

10) hrcJ
( YP_005804077.1 )

type III secretion innermembrane protein HrcJ

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-56

11) hrcJ
( YP_002650060.1 )

Hrp/hrc secretion/translocation pathway protein HrcJ

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-56

12) Ser39006_2905
( YP_008523287.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_022268
(Serratia sp. ATCC 39006)

2e-56

13) hrcJ
( YP_003539952.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

5e-56

14) hrcJ
( YP_003529902.1 )

type III secretion inner-membrane protein HrcJ

NC_013961
(Erwinia amylovora CFBP1430)

5e-56

15) hrcJ
( YP_001906477.1 )

HrcJ protein

NC_010694
(Erwinia tasmaniensis Et1/99)

6e-56

16) hrcJ
( YP_050190.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-55

17) PC1_2197
( YP_003017772.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_012917
(Pectobacterium carotovorum PC1)

2e-55

18) PCC21_022750
( YP_006646931.1 )

type III secretion protein

NC_018525
(Pectobacterium carotovorum PCC21)

2e-55

19) D781_3927
( YP_007346302.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_020064
(Serratia marcescens FGI94)

7e-55

20) hrcJ
( YP_005818269.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcJ protein

NC_017445
(Erwinia sp. Ejp617)

1e-54

21) Dd1591_1899
( YP_003004228.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_012912
(Dickeya zeae Ech1591)

8e-55

22) hrcJ
( YP_003883232.1 )

type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)

NC_014500
(Dickeya dadantii 3937)

2e-54

23) Dd586_1896
( YP_003333460.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_013592
(Dickeya dadantii Ech586)

3e-54

• Sequence Alignments

1) hrcJ in NC_004578


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  361 bits (1356),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 268/268 (100%), Positives = 268/268 (100%), Gaps = 0/268 (0%)

Query  1    MNFLSAgllllcmlllggcSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60
            MNFLSAGLLLLCMLLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT
Sbjct  1    MNFLSAGLLLLCMLLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60

Query  61   VATSEMNRAVRVLDAAGLPRRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ  120
            VATSEMNRAVRVLDAAGLPRRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ
Sbjct  61   VATSEMNRAVRVLDAAGLPRRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ  120

Query  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180
            IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST
Sbjct  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180

Query  181  QSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLPFWNLMlwvapvglalvlligal  240
            QSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGAL
Sbjct  181  QSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGAL  240

Query  241  lvRSDWRASLLRRIGFGSRGRSTLPARA  268
            LVRSDWRASLLRRIGFGSRGRSTLPARA
Sbjct  241  LVRSDWRASLLRRIGFGSRGRSTLPARA  268

2) hrcJ in NC_005773


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  345 bits (1296),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 221/248 (90%), Positives = 241/248 (98%), Gaps = 0/248 (0%)

Query  21   DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGLPR  80
            DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATS+MNRAVRVL+AAGLPR
Sbjct  21   DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLPR  80

Query  81   QSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG  140
            +SR++LG+IFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG  140

Query  141  EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEFQE  200
            EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMS+QS +SKKFSIVFVPA+EFQE
Sbjct  141  EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQE  200

Query  201  TTQWASFGPFKLDSEELPFWHLMlwlvpagvvvllliialllRSDWRAALLRRIGFGARS  260
            TTQW SFGPFKLDS +LPFW+LMLW+ P G+ ++LLI ALL+RSDWRA+LLRRIGFG+R+
Sbjct  201  TTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGALLVRSDWRASLLRRIGFGSRG  260

Query  261  RSTVPARA  268
            RST+PARA
Sbjct  261  RSTLPARA  268

3) HrcJ in NC_007005


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  342 bits (1284),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 242/268 (91%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKFLSAGLLLICMVLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60
            M+FLSAGLLL+CM+LLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT
Sbjct  1    MNFLSAGLLLLCMLLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60

Query  61   VATSDMNRAVRVLNAAGLPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQ  120
            VATS+MNRAVRVL+AAGLPR+SR++LG+IFKKEGVISTPLEERARYIYALSQELEATLSQ
Sbjct  61   VATSEMNRAVRVLDAAGLPRRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ  120

Query  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180
            IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST
Sbjct  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180

Query  181  QSAESKKFSIVFVPATEFQETTQWVSFGPFKLDSANLPFWNLMlwlvpvglavllliial  240
            QS +SKKFSIVFVPA+EFQETTQWVSFGPFKLDS+NLPFWNLMLW+ PVGLA++LLI AL
Sbjct  181  QSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGAL  240

Query  241  llRSDWRASVLGRIGLAGRSRSTVPARA  268
            L+RSDWRAS+L RIG+++R+RST+PARA
Sbjct  241  LVRSDWRASLLRRIGFGSRGRSTLPARA  268

4) Pmen_0028 in NC_009439


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  271 bits (1014),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 178/252 (71%), Positives = 220/252 (88%), Gaps = 4/252 (1%)

Query  19   SDRTDLFSGLSELDANEVIASLGEHRISARKRAEKAGVVVTVDTAEINRAVRVLEAAGLP  78
            SD TDLF+GLSE D+NEV+A L++++I ARKR EK+GVVVTV T+E+NRAVRVL+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  79   RRARTSLGEIFKKEGVISTPLEERARYIYALSQELESTLSQIDGVIVARVHVVLPERIAP  138
            RR+RT+LGEIFKKEGVISTPLEERARYIYALSQELE+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKHAASLEPDAVQRRIQQMVVSSIPGLASTGVESSEKFSIVFVPAAEL  198
            GEPVQPASAAVFIKH+A+L+PD+V+ RIQQMV SSIPG+++ +V+S  KFSIVFVPAAE+
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSK-KFSIVFVPAAEF  198

Query  199  QDADTLVPFGPFLIESQKLGFWQlmswliplggllllavltllVRQDWRSVLLRRVRPRQ  258
            Q++   V+FGPF ++S +L FW+LM W+ P+G  L+L + +LLVR DWR+ LLRR+    
Sbjct  199  QETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGALLVRSDWRASLLRRI---G  255

Query  259  PASHNVSTLPSR  270
             +S+  STLP+R
Sbjct  256  FGSRGRSTLPAR  267

5) hrcJ in NC_016830


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  240 bits (894),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 136/234 (59%), Positives = 194/234 (83%), Gaps = 4/234 (1%)

Query  19   DERTALHSHLSEQDANEVIAELANKNVEASKQVDKEGLTVLVEPADMNSAVQVLEAAGLP  78
             + T L + LSEQD+NEV+A LA+++++A K+++K G+ V V  ++MN AV+VL+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  79   RRSRSSLGEIFRKEGVISTPMEERARYIYALSQELESTLSQIDGVVLARVHVVLPERVAP  138
            RRSR++LGEIF+KEGVISTP+EERARYIYALSQELE+TLSQIDGV++ARVHVVLPER+AP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASASVFIKHTSALDPDSITPRVRNLVASGIPGMADATQNPAKLSVVFVPAAPYQ  198
            GEPVQPASA+VFIKH++ALDPDS+  R++++VAS+IPGM+  + ++ K+S+VFVPAA +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  ERRKMAYFGPFLMQADDISYWRAVTVTASIAL-LAILMGTLYGLYRL-WRNGVL  250
            E  +   FGPF +++ ++++W  +   A+++L L +L+G+L  L R  WR ++L
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGAL--LVRSDWRASLL  251

6) PSEBR_a5370 in NC_015379


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  238 bits (886),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 136/234 (59%), Positives = 190/234 (82%), Gaps = 4/234 (1%)

Query  19   DERTALHSHLSEQDANEVIAELANKNVEASKQVDKDGLTVLVEPADMNSAVQVLEAAGLP  78
             + T L + LSEQD+NEV+A LA+++++A K+++K G+ V V  ++MN AV+VL+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  79   RRSRSSLGEIFRKEGVISTPMEERARYIYALSQELESTLSQIDGVVLARVHVVLPERVAP  138
            RRSR++LGEIF+KEGVISTP+EERARYIYALSQELE+TLSQIDGV++ARVHVVLPER+AP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASASVFIKHTNALDPDSITPRVRNLVASGIPGMADATQNPTKLSVVFVPAAPYQ  198
            GEPVQPASA+VFIKH+ ALDPDS+  R++++VAS+IPGM+  + ++ K+S+VFVPAA +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  ERRKMAYFGPFLMQADDIGYWRAVTVTASITL-LAILMGVLYGLYRL-WRQGVL  250
            E  +   FGPF +++ ++ +W  +   A++ L L +L+G L  L R  WR ++L
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGAL--LVRSDWRASLL  251

7) rscJ in NC_017911


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  236 bits (882),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 134/201 (67%), Positives = 171/201 (86%), Gaps = 0/201 (0%)

Query  21   GDRVELHRQLSEQEANEVVAELADKHIRAQKTPAKDGVVVTVNTNDIGRAVRTLEAAGLP  80
            +D  +L   LSEQ++NEVVA LAD+HI A+K   K GVVVTV T+++ RAVR L+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  81   RLARTTMGDTFRKEGVISTPLEERARYIYALSQELETTLSKIDGVIVARVHVVLPERIAP  140
            R +RTT+G+ F+KEGVISTPLEERARYIYALSQELE+TLS+IDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASASVFIKHDPRLDPDNIRARVRRMVASSIPGMTTAVDNPQKLTVVFVPASTYQ  200
            GEPVQPASA+VFIKH + LDPD++R+R+++MVASSIPGM+T   +++K+++VFVPA+ +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  201  EQQRLVYFGPFLVPGDDLGFW  221
            E  + V FGPF + + +L FW
Sbjct  200  ETTQWVSFGPFKLDSTNLPFW  220

8) rscJ in NC_012660


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  230 bits (859),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 136/233 (59%), Positives = 184/233 (79%), Gaps = 6/233 (2%)

Query  28   GDRVELHRQLSEQEANEVIAELADKHIRARKIPTKDGVTVSVDTNDIGRAVRTLEAVGLP  87
            +D  +L   LSEQ++NEV+A LAD+HI ARK   K GV V+V T+++ RAVR L+A GLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  88   KLARATLGDTFRKEGVISTPLEERARYIYALSQELEATLSNIDGVIVARVHVVLPERIAP  147
            + +R+TLG+ F+KEGVISTPLEERARYIYALSQELEATLS+IDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  148  GEPVQPASASVFIKHDPRLDPDNIRARVRRMVASSIPGMTTAVDNPQKLTVIFVPAVAYQ  207
            GEPVQPASA+VFIKH + LDPD++R+R+++MVASSIPGM+T   +++K++++FVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  208  EQKRLVYFGPFLIPADDRSFW----WTCLVGVLGGLIFTVAGSLFLLNRRQRL  256
            E  + V FGPF + + + +FW    W   VG+  +L++ +++ L   ++R  L
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGL--ALVLLIGALLVRSDWRASL  250

9) Marme_1087 in NC_015276


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  214 bits (797),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 122/209 (59%), Positives = 168/209 (81%), Gaps = 8/209 (3%)

Query  22   QDIELHKKLSEEDANEVIAELASRHIEAEKKATKEGVTVLVEASSMARAVRILEAAGLPR  81
            ++ +L   LSE+D+NEV+A LA +HI+A K+  K GV V V +S M RAVR+L+AAGLPR
Sbjct  21   DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLPR  80

Query  82   KPRANFGEVFKKEGVISSPLEERARYIYALSQELESTISQIDGILIARVHVVLPERIAPG  141
            ++R+ +GE+FKKEGVIS+PLEERARYIYALSQELE+T+SQIDG+++ARVHVVLPERIAPG
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG  140

Query  142  EAVQPASSAVFIKHRPDLDPDVIRPRIERLVRTSIPGLSEK---PDKLSVVFVVTKAYQE  198
            E+VQPAS+AVFIKH + LDPD +R RI+++V +SIPG+S +   + K+S+VFV +  +QE
Sbjct  141  EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQE  200

Query  199  QQQLVRVGPFLMDASDL--W---VWRSAI  222
              Q V  GPF +D+++L  W   +W +++
Sbjct  201  TTQWVSFGPFKLDSTNLPFWNLMLWVAPV  229

10) hrcJ in NC_017390


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 129/228 (57%), Positives = 182/228 (80%), Gaps = 6/228 (2%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGLP  80
            +D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++E+NRAV++LDAAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++ +S   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  DKPPKVSFGPFLVTPEQSA---QLSWLSGMIGVLILMVVAGVLGWPHW  243
            +    VSFGPF + + + +    + W++  +G+ ++++++++L +++W
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAP-VGLALVLLIGALLVRSDW  246

11) hrcJ in NC_012214


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 129/228 (57%), Positives = 182/228 (80%), Gaps = 6/228 (2%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGLP  80
            +D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++E+NRAV++LDAAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++ +S   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  DKPPKVSFGPFLVTPEQSA---QLSWLSGMIGVLILMVVAGVLGWPHW  243
            +    VSFGPF + + + +    + W++  +G+ ++++++++L +++W
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAP-VGLALVLLIGALLVRSDW  246

12) Ser39006_2905 in NC_022268


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  212 bits (789),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/229 (57%), Positives = 180/229 (79%), Gaps = 9/229 (3%)

Query  22   GDQVELHRGLSENDANEVIAALGGYHIEAEKRLDKTGVTILLDKKDIDRAVNILSAAGLP  81
            +D+ +L  GLSE+D+NEV+A L++ HI+A KRL+KTGV + +   +++RAV +L AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  82   RQARTNLGEVFQKSGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAP  141
            R++RT LGE+F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  142  GEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPYI  199
            GEP+QPASAAVFIK  + L+PDS+  RI++MVASSIPG++ +S   K ++IVFVPA  + 
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  200  DHIPMISLGPFQFTPQEMA---QLQWV--VTLLILSVIGALGWLIGKPW  243
            +    +S+GPF++ + +++    + WV  V L ++ +IGAL  L+   W
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGAL--LVRSDW  246

13) hrcJ in NC_013971


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  210 bits (782),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 129/228 (57%), Positives = 181/228 (80%), Gaps = 6/228 (2%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLTNKEGITVLVDAAELNRAVHILDAAGLP  80
            +D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++E+NRAV++LDAAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++ +S   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  DKPPQVSFGPFLVTPERSA---QLSWLSGMIGVLILMVVAGVLGWPHW  243
            +    VSFGPF + +   +    + W++  +G+ ++++++++L +++W
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAP-VGLALVLLIGALLVRSDW  246

14) hrcJ in NC_013961


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  210 bits (782),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 129/228 (57%), Positives = 181/228 (80%), Gaps = 6/228 (2%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLTNKEGITVLVDAAELNRAVHILDAAGLP  80
            +D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++E+NRAV++LDAAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++ +S   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  DKPPQVSFGPFLVTPERSA---QLSWLSGMIGVLILMVVAGVLGWPHW  243
            +    VSFGPF + +   +    + W++  +G+ ++++++++L +++W
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWNLMLWVAP-VGLALVLLIGALLVRSDW  246

15) hrcJ in NC_010694


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  210 bits (781),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 126/195 (65%), Positives = 160/195 (83%), Gaps = 2/195 (1%)

Query  21   DDRVELNHGLTENDANEVAAELGRYHIQAEKRNNKDGITVLVNAEELNRAVHILDAAGLP  80
             D  +L  GL+E+D+NEV A L+  HI+A KR +K G+ V V + E+NRAV++LDAAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAARS--DKDLAIVFVPAETYQ  198
            GEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++++S   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  DKPTEVSFGPFRVTP  213
            +    VSFGPF++ +
Sbjct  200  ETTQWVSFGPFKLDS  214

16) hrcJ in NC_004547


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  209 bits (778),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 124/202 (62%), Positives = 166/202 (83%), Gaps = 2/202 (0%)

Query  19   GEPIELNRGLSENDANEAISMLGRYQIGAEKRVEKTGVTLVIDAKNMERAVNILNAAGLP  78
            ++  +L  GLSE+D+NE ++ L+  +I+A KR+EKTGV + + + +M+RAV +L+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  79   KQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVMVARVHVVLPERIAP  138
            ++SRT LGE+F+K GVISTPLEERARYIYALSQE+EATL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKYRAELEPDGMEPRIRRMVASSIPGLSGK--DDKELAIVFVPAEPYQ  196
            GEPVQPASAAVFIK  A L+PD++  RI++MVASSIPG+S +  D K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  197  DTIPVVTLGPFTLTPDEMRRWQ  218
            +T   V++GPF L + ++  W+
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWN  221

17) PC1_2197 in NC_012917


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  208 bits (775),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 123/202 (61%), Positives = 166/202 (83%), Gaps = 2/202 (0%)

Query  19   GEPIELNRGLSENDANEAISMLGRYQIGAEKRVDKTGVTLVIDAKNMERAVNILNAAGLP  78
            ++  +L  GLSE+D+NE ++ L+  +I+A KR++KTGV + + + +M+RAV +L+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  79   KQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVLVARVHVVLPERIAP  138
            ++SRT LGE+F+K GVISTPLEERARYIYALSQE+EATL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKYRAELEPDGMEPRIRRMVASSIPGLSGK--DDKELAIVFVPAEPYQ  196
            GEPVQPASAAVFIK  A L+PD++  RI++MVASSIPG+S +  D K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  197  DTIPVVTLGPFTLTPDEMRRWQ  218
            +T   V++GPF L + ++  W+
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWN  221

18) PCC21_022750 in NC_018525


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  208 bits (774),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 123/202 (61%), Positives = 166/202 (83%), Gaps = 2/202 (0%)

Query  19   GEPIELNRGLSENDANEAISMLGRYQIGAEKRVDKTGVTLVIDAKNMERAVNILNAAGLP  78
            ++  +L  GLSE+D+NE ++ L+  +I+A KR++KTGV + + + +M+RAV +L+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  79   KQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVLVARVHVVLPERIAP  138
            ++SRT LGE+F+K GVISTPLEERARYIYALSQE+EATL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKYRAELEPDGMEQRIRRMVASSIPGLSGK--DDKELAIVFVPAEPYQ  196
            GEPVQPASAAVFIK  A L+PD++  RI++MVASSIPG+S +  D K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  197  DTIPVVTLGPFTLTPDEMRRWQ  218
            +T   V++GPF L + ++  W+
Sbjct  200  ETTQWVSFGPFKLDSTNLPFWN  221

19) D781_3927 in NC_020064


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  207 bits (768),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 121/197 (62%), Positives = 164/197 (84%), Gaps = 2/197 (1%)

Query  22   GDETVLNSNLSESDANDIVAALNHYHIAADKRVEKSGVSVLVAAADIERSVNILDAAGLP  81
            +DET L + LSE D+N++VA L + HI A KR+EK+GV V VA+++++R+V +LDAAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  82   RKARTNLGEVFQKSGVISSPMEERARYIYALSQEVESTLSQIDGVVVARVHVVLPERIAP  141
            R++RT LGE+F+K GVIS+P+EERARYIYALSQE+E+TLSQIDGV+VARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  142  GEPVQPASASVFIKYADSLDPDSIEPRIRRLVATSIPGLVGR--EDKDLAIVFVPAKAWR  199
            GEPVQPASA+VFIK + +LDPDS+  RI+++VA+SIPG+  +  + K ++IVFVPA   +
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  200  DQTPVVNLGPFALTPGQ  216
            + T  V++GPF L + +
Sbjct  200  ETTQWVSFGPFKLDSTN  216

20) hrcJ in NC_017445


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  206 bits (766),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 125/191 (66%), Positives = 158/191 (83%), Gaps = 2/191 (1%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGLP  80
            +D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++E+NRAV++LDAAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++ +S   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  199  DKPPKVSFGPF  209
            +    VSFGPF
Sbjct  200  ETTQWVSFGPF  210

21) Dd1591_1899 in NC_012912


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  206 bits (767),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 120/198 (61%), Positives = 163/198 (83%), Gaps = 2/198 (1%)

Query  23   GDRVELHRGLSENDANEVIAALGGYHIGAEKRTDKAGVSILIDVKDMERAVNILNAAGLP  82
            +D  +L  GLSE+D+NEV+A L++ HI+A KR +K+GV + +   +M+RAV +L+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  83   RQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAP  142
            R++RT LG++F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  143  GEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPYK  200
            GEP+QPASAAVFIK  + L+PDS+  RI++MVASSIPG++ +S   K ++IVFVPA  ++
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  201  DHIPKVSLGPFQLTPQTM  218
            +    VS+GPF+L +  +
Sbjct  200  ETTQWVSFGPFKLDSTNL  217

22) hrcJ in NC_014500


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 121/194 (63%), Positives = 161/194 (83%), Gaps = 2/194 (1%)

Query  2    ELHRGLSENDANEVIAALGGYHIGAEKRTEKTGVSILIDVKDMERAVNILNAAGLPRQAR  61
            +L  GLSE+D+NEV+A L++ HI+A KR EKTGV + +   +M+RAV +L+AAGLPR++R
Sbjct  24   DLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLPRRSR  83

Query  62   TNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAPGEPI  121
            T LG++F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAPGEP+
Sbjct  84   TTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPGEPV  143

Query  122  QPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPYKDHIP  179
            QPASAAVFIK  + L+PDS+  RI++MVASSIPG++ +S   K ++IVFVPA  +++   
Sbjct  144  QPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQETTQ  203

Query  180  TVSLGPFQLTPQTM  193
             VS+GPF+L +  +
Sbjct  204  WVSFGPFKLDSTNL  217

23) Dd586_1896 in NC_013592


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  205 bits (761),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 119/198 (61%), Positives = 163/198 (83%), Gaps = 2/198 (1%)

Query  23   GDRVELHRGLSENDANEVIAALGGYHIGAEKRTDKAGVSILIDVKDMERSVNILNAAGLP  82
            +D  +L  GLSE+D+NEV+A L++ HI+A KR +K+GV + +   +M+R+V +L+AAGLP
Sbjct  20   SDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLP  79

Query  83   RQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAP  142
            R++RT LG++F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  143  GEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--EKDLAIVFVPAEPYK  200
            GEP+QPASAAVFIK  + L+PDS+  RI++MVASSIPG++ +S   K ++IVFVPA  ++
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  201  DHIPTVSLGPFQLMPQTM  218
            +    VS+GPF+L +  +
Sbjct  200  ETTQWVSFGPFKLDSTNL  217

24) VPBB_1548 in NC_019955


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 83/188 (45%), Positives = 129/188 (69%), Gaps = 7/188 (3%)

Query  21   QTELYTNVSQKEGNEMLSILLSEGVVATKEPDKDNKVKLMVDSSQIAFAVDALKRKGYPR  80
            +T+L+T +S++++NE+++ L  + + A K  +K   V + V +S++  AV  L   G PR
Sbjct  22   ETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSEMNRAVRVLDAAGLPR  80

Query  81   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  140
               +TL E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  141  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  195
            GE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++E +
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  196  VTTQSNQF  203
             TTQ   F
Sbjct  200  ETTQWVSF  207

25) N646_0755 in NC_022349


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 129/188 (69%), Gaps = 7/188 (3%)

Query  20   QTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKGYPR  79
            +T+L+T ++++++NE+++ L  + + A K  +K   V + V +S++  AV  L   G PR
Sbjct  22   ETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSEMNRAVRVLDAAGLPR  80

Query  80   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  139
               +TL E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  140  GERPTPASASVFIKHAADIALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  194
            GE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++E +
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  195  VATQNNQF  202
             +TQ   F
Sbjct  200  ETTQWVSF  207

26) VEA_003344 in NC_013456


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 129/188 (69%), Gaps = 7/188 (3%)

Query  20   QTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKGYPR  79
            +T+L+T ++++++NE+++ L  + + A K  +K   V + V +S++  AV  L   G PR
Sbjct  22   ETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSEMNRAVRVLDAAGLPR  80

Query  80   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  139
               +TL E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  140  GERPTPASASVFIKHAADIALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  194
            GE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++E +
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  195  IATQNNQF  202
             +TQ   F
Sbjct  200  ETTQWVSF  207

27) M892_04620 in NC_022269


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 83/190 (44%), Positives = 130/190 (69%), Gaps = 7/190 (3%)

Query  16   QTELYTGVSQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDNAQIAFAVDALKRKGYPR  75
            +T+L+TG+S++++NE+++ L  + + A K  +K   V + V  +++  AV  L   G PR
Sbjct  22   ETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSEMNRAVRVLDAAGLPR  80

Query  76   EQFSTLKEVFPKDDLISSPLAERARLIYAKSQELSSTLSQIDGVLVARVHVVLEDQNLRP  135
               +TL E+F K+++IS+PL ERAR IYA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  136  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  190
            GE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++E +
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  191  VTSQGNQFES  200
             T+Q   F +
Sbjct  200  ETTQWVSFGP  209

28) VIBHAR_01707 in NC_009783


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 83/190 (44%), Positives = 130/190 (69%), Gaps = 7/190 (3%)

Query  25   QTELYTGVSQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDNAQIAFAVDALKRKGYPR  84
            +T+L+TG+S++++NE+++ L  + + A K  +K   V + V  +++  AV  L   G PR
Sbjct  22   ETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSEMNRAVRVLDAAGLPR  80

Query  85   EQFSTLKEVFPKDDLISSPLAERARLIYAKSQELSSTLSQIDGVLVARVHVVLEDQNLRP  144
               +TL E+F K+++IS+PL ERAR IYA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  145  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  199
            GE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++E +
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  200  VTSQGNQFES  209
             T+Q   F +
Sbjct  200  ETTQWVSFGP  209

29) VP1690 in NC_004603


> NC_004578_P1|29|G21|28868592|NP_791211.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|23807..24613|hrcJ|PSPTO_1384|type 
III secretion protein HrcJ
Length=268

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 129/188 (69%), Gaps = 7/188 (3%)

Query  21   QTELYTNVSQKEGNEMLSILLSEGVVATKEPDKDNKVKLMVDSSQIAFAVDALKRKGYPR  80
            +T+L+T +S++++NE+++ L  + + A K  +K   V + V +S++  AV  L   G PR
Sbjct  22   ETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSEMNRAVRVLDAAGLPR  80

Query  81   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  140
               +TL E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  141  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  195
            GE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++E +
Sbjct  140  GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQ  199

Query  196  VATQSNQF  203
             +TQ   F
Sbjct  200  ETTQWVSF  207