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Homologs of insA gene of NC_004337_P2

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) S2308
( - )

NC_004741
(Shigella flexneri 2457T)

e-153

99.6

2) unnamed
( - )

NC_007613
(Shigella boydii Sb227)

e-153

99.3

3) unnamed
( - )

NC_007613
(Shigella boydii Sb227)

e-153

99.3

4) unnamed
( - )

NC_007613
(Shigella boydii Sb227)

e-151

98.9

5) SeSA_B0088
( - )

NC_011092
(Salmonella enterica CVM19633)

e-129

90.6

6) unnamed
( - )

NC_007384
(Shigella sonnei Ss046)

e-120

94.6

• Sequence Alignments

1) S2308 in NC_004741


>NC_004337_P2|29|G23|24114954|NP_709464.1|Shigella_flexneri_2a_str._301|-|28522..28797|insA|SF3725|IS1 
          Length = 276

 Score = 539 bits (1391), Expect = e-153
 Identities = 275/276 (100%)
 Strand = Plus / Plus

Query: 1   gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 60

Query: 61  ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 120

Query: 121 ctacagttcacttacaccgcctctcagcccggtacgcaccagaaaatcattgatatggcc 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacagttcacttacaccgtctctcagcccggtacgcaccagaaaatcattgatatggcc 180

Query: 181 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcaacacggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcaacacggtt 240

Query: 241 ttacgtcacttaaaaaactcaggccgcagtcggtaa 276
           ||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacgtcacttaaaaaactcaggccgcagtcggtaa 276

2) unnamed in NC_007613


>NC_004337_P2|29|G23|24114954|NP_709464.1|Shigella_flexneri_2a_str._301|-|28522..28797|insA|SF3725|IS1 
          Length = 276

 Score = 536 bits (1384), Expect = e-153
 Identities = 274/276 (99%)
 Strand = Plus / Plus

Query: 56  gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 115
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 60

Query: 116 ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 120

Query: 176 ctacagttcacttacaccgcctctcagcccggtacgcaccagaaaatcattgatatggcc 235
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacagttcacttacaccgtctctcagcccggtacgcaccagaaaatcattgatatggcc 180

Query: 236 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcaacacgatt 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcaacacggtt 240

Query: 296 ttacgtcacttaaaaaactcaggccgcagtcggtaa 331
           ||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacgtcacttaaaaaactcaggccgcagtcggtaa 276

3) unnamed in NC_007613


>NC_004337_P2|29|G23|24114954|NP_709464.1|Shigella_flexneri_2a_str._301|-|28522..28797|insA|SF3725|IS1 
          Length = 276

 Score = 536 bits (1384), Expect = e-153
 Identities = 274/276 (99%)
 Strand = Plus / Plus

Query: 56  gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 115
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 60

Query: 116 ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 120

Query: 176 ctacagttcacttacaccgcctctcagcccggtacgcaccagaaaatcattgatatggcc 235
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacagttcacttacaccgtctctcagcccggtacgcaccagaaaatcattgatatggcc 180

Query: 236 atgaatggcgtcggatgtcgcgtcagtgcacgcattatgggcgttggcctcaacacggtt 295
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcaacacggtt 240

Query: 296 ttacgtcacttaaaaaactcaggccgcagtcggtaa 331
           ||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacgtcacttaaaaaactcaggccgcagtcggtaa 276

4) unnamed in NC_007613


>NC_004337_P2|29|G23|24114954|NP_709464.1|Shigella_flexneri_2a_str._301|-|28522..28797|insA|SF3725|IS1 
          Length = 276

 Score = 530 bits (1369), Expect = e-151
 Identities = 273/276 (99%)
 Strand = Plus / Plus

Query: 56  gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 115
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 60

Query: 116 ggcaaaagcactgccggacatcagcgctatctctgctctcatttccgtaaaacatggcaa 175
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61  ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 120

Query: 176 ctacagttcacttacaccgcctctcagcccggtacgcaccagaaaatcattgatatggcc 235
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacagttcacttacaccgtctctcagcccggtacgcaccagaaaatcattgatatggcc 180

Query: 236 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcatcacggtt 295
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcaacacggtt 240

Query: 296 ttacgtcacttaaaaaactcaggccgcagtcggtaa 331
           ||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacgtcacttaaaaaactcaggccgcagtcggtaa 276

5) SeSA_B0088 in NC_011092


>NC_004337_P2|29|G23|24114954|NP_709464.1|Shigella_flexneri_2a_str._301|-|28522..28797|insA|SF3725|IS1 
          Length = 276

 Score = 458 bits (1182), Expect = e-129
 Identities = 250/276 (91%)
 Strand = Plus / Plus

Query: 1   gtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac 60
           ||||||||  |||| ||||| ||||| ||||| || |||||||| || ||||||||||||
Sbjct: 1   gtggcttccatttccatcagatgtccttcctgctccgctactgaaggcgtggtgcgtaac 60

Query: 61  ggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaa 120
           ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61  ggcaaaagcactgccggacatcagcgctatctctgctctcattgccgtaaaacatggcaa 120

Query: 121 ctgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggcc 180
           || ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 ctacagttcacttacaccgtctctcagcccggtacgcaccagaaaatcattgatatggcc 180

Query: 181 atgaatggcgttggatgccgggcaaccgcccgcattatgggcgttggcctcaacacgatt 240
           ||||||||||| ||||| || || |  || ||||||||||||||||||||||||||| ||
Sbjct: 181 atgaatggcgtcggatgtcgcgccagtgcacgcattatgggcgttggcctcaacacggtt 240

Query: 241 ttccgccatttaaaaaactcaggccgcagtcggtaa 276
           || || || |||||||||||||||||||||||||||
Sbjct: 241 ttacgtcacttaaaaaactcaggccgcagtcggtaa 276

6) unnamed in NC_007384


>NC_004337_P2|29|G23|24114954|NP_709464.1|Shigella_flexneri_2a_str._301|-|28522..28797|insA|SF3725|IS1 
          Length = 276

 Score = 428 bits (1104), Expect = e-120
 Identities = 227/240 (95%)
 Strand = Plus / Plus

Query: 92  gctactgacggggtggtgcgtaacggcaaaagcactgccggacatcagcgctatctctgc 151
           |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  gctactgaaggcgtggtgcgtaacggcaaaagcactgccggacatcagcgctatctctgc 96

Query: 152 tctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacg 211
           ||||| |||||||||||||||||||| ||||||||||||||||  ||||| |||||||||
Sbjct: 97  tctcattgccgtaaaacatggcaactacagttcacttacaccgtctctcagcccggtacg 156

Query: 212 caccagaaaatcattgatatggccatgaatggcgttggatgccgggcaactgcacgcatt 271
           ||||||||||||||||||||||||||||||||||| ||||| || || | ||||||||||
Sbjct: 157 caccagaaaatcattgatatggccatgaatggcgtcggatgtcgcgccagtgcacgcatt 216

Query: 272 atgggcgttggcctcaacacgattttacgtcacttaaaaaactcaggccgcagtcggtaa 331
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atgggcgttggcctcaacacggttttacgtcacttaaaaaactcaggccgcagtcggtaa 276