Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III secretion system protein SpaR |
NC_021820 (Salmonella enterica 08-1736) |
9e-106 |
100 |
|
needle complex export protein |
NC_016856 (Salmonella enterica 14028S) |
9e-106 |
100 |
|
type III secretion system protein SpaR |
NC_021810 (Salmonella enterica 41578) |
9e-106 |
100 |
|
type III secretion system secretory apparatus |
NC_017046 (Salmonella enterica 798) |
9e-106 |
100 |
|
Type III secretion inner membrane protein |
NC_017623 (Salmonella enterica B182) |
9e-106 |
100 |
|
type III secretion system protein SpaR |
NC_021814 (Salmonella enterica CFSAN001921) |
9e-106 |
100 |
|
type III secretion system protein SpaR |
NC_020307 (Salmonella enterica CFSAN001992) |
9e-106 |
100 |
|
type III secretion system protein SpaR |
NC_021818 (Salmonella enterica CFSAN002050) |
9e-106 |
100 |
|
type III secretion system protein SpaR |
NC_021812 (Salmonella enterica CFSAN002069) |
9e-106 |
100 |
|
secretory protein (associated with virulence) |
NC_016854 (Salmonella enterica D23580) |
9e-106 |
100 |
|
needle complex export protein |
NC_003197 (Salmonella enterica LT2) |
9e-106 |
100 |
|
virulence associated secretory protein |
NC_012125 (Salmonella enterica RKS4594) |
9e-106 |
100 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
9e-106 |
100 |
|
type III secretion system secretory apparatus |
NC_016810 (Salmonella enterica SL1344) |
9e-106 |
100 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_011083 (Salmonella enterica SL476) |
9e-106 |
100 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_011149 (Salmonella enterica SL483) |
9e-106 |
100 |
|
needle complex export protein |
NC_016857 (Salmonella enterica ST4/74) |
9e-106 |
100 |
|
type III secretion system apparatus protein SpaR/YscT/HrcT |
NC_016860 (Salmonella enterica T000240) |
9e-106 |
100 |
|
type III secretion system protein SpaR |
NC_021151 (Salmonella enterica U288) |
9e-106 |
100 |
|
needle complex export protein |
NC_016863 (Salmonella enterica UK-1) |
9e-106 |
100 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_011094 (Salmonella enterica CVM19633) |
1e-105 |
99 |
|
virulence associated secretory protein |
NC_011274 (Salmonella enterica 287/91) |
3e-105 |
99 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_022241 (Salmonella enterica 3114) |
3e-105 |
99 |
|
virulence secretory protein |
NC_011147 (Salmonella enterica AKU12601) |
3e-105 |
99 |
|
secretory protein (associated with virulence) |
NC_006511 (Salmonella enterica ATCC 9150) |
3e-105 |
99 |
|
secretory protein |
NC_022221 (Salmonella enterica CDC1983-67) |
3e-105 |
99 |
|
type III secretion system protein SpaR |
NC_021844 (Salmonella enterica CFSAN000189) |
3e-105 |
99 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_011205 (Salmonella enterica CT_02021853) |
3e-105 |
99 |
|
secretory protein |
NC_011294 (Salmonella enterica P125109) |
3e-105 |
99 |
|
secretory protein (associated with virulence) |
NC_016831 (Salmonella enterica RKS5078) |
3e-105 |
99 |
|
type III secretion system protein SpaR |
NC_021984 (Salmonella enterica S06004) |
3e-105 |
99 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_011080 (Salmonella enterica SL254) |
3e-105 |
99 |
|
Surface presentation of antigens protein spaR |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
3e-105 |
99 |
|
secretory protein (associated with virulence) |
NC_003198 (Salmonella enterica CT18) |
2e-104 |
99 |
|
Surface presentation of antigens protein spaR |
NC_016832 (Salmonella enterica P-stx-12) |
2e-104 |
99 |
|
virulence-associated secretory protein |
NC_004631 (Salmonella enterica Ty2) |
2e-104 |
99 |
|
virulence-associated secretory protein |
NC_021176 (Salmonella enterica Ty21a) |
2e-104 |
99 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
2e-104 |
97 |
|
surface presentation of antigens; secretory proteins |
NC_006905 (Salmonella enterica SC-B67) |
1e-103 |
99 |
|
Surface presentation of antigens protein SpaR;Type III secretion inner membrane protein |
NC_021870 (Salmonella bongori N268-08) |
7e-98 |
97 |
|
virulence associated secretory protein |
NC_015761 (Salmonella bongori NCTC 12419) |
7e-98 |
97 |
|
flagellar biosynthetic protein FliR |
NC_021505 (Pseudomonas putida NBRC 14164) |
5e-60 |
54 |
|
surface presentation of antigens secretory protein |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
8e-53 |
61 |
|
surface presentation of antigens protein |
NC_019670 (Pseudomonas sp. UW4) |
2e-48 |
56 |
|
protein SpaR |
NC_016830 (Pseudomonas fluorescens F113) |
2e-46 |
56 |
|
type III needle complex export protein |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
5e-43 |
52 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_018650 (Escherichia coli 2009EL-2050) |
5e-42 |
48 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_018661 (Escherichia coli 2009EL-2071) |
5e-42 |
48 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_018658 (Escherichia coli 2011C-3493) |
5e-42 |
48 |
|
Type III secretion protein EpaR |
NC_011748 (Escherichia coli 55989) |
5e-42 |
48 |
|
type III secretion protein EpaR |
NC_020163 (Escherichia coli APEC O78) |
5e-42 |
48 |
|
type III secretion protein EpaR |
NC_017646 (Escherichia coli CE10) |
1e-41 |
48 |
|
type III secretion protein SpaR/YscT/HrcT |
NC_010468 (Escherichia coli ATCC 8739) |
3e-41 |
48 |
|
type III secretion apparatus protein EpaR |
NC_009800 (Escherichia coli HS) |
3e-41 |
48 |
|
type III secretion apparatus protein EpaR |
NC_017641 (Escherichia coli UMNK88) |
3e-41 |
48 |
|
type III secretion system protein |
NC_017626 (Escherichia coli 042) |
3e-41 |
47 |
|
putative type III secretion protein EpaR |
NC_011751 (Escherichia coli UMN026) |
4e-41 |
47 |
|
type III secretion protein EpaR |
NC_013364 (Escherichia coli 11128) |
2e-40 |
46 |
|
type III secretion protein EpaR |
NC_013361 (Escherichia coli 11368) |
2e-40 |
46 |
|
type III secretion protein SpaR/YscT/HrcT |
NC_016902 (Escherichia coli KO11FL) |
3e-40 |
46 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_017660 (Escherichia coli KO11FL) |
3e-40 |
46 |
|
type III secretion protein |
NC_022364 (Escherichia coli LY180) |
3e-40 |
46 |
|
putative type III secretion protein |
NC_011415 (Escherichia coli SE11) |
3e-40 |
46 |
|
type III secretion system protein |
NC_017635 (Escherichia coli W) |
3e-40 |
46 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_017664 (Escherichia coli W) |
3e-40 |
46 |
|
type III secretion system protein |
NC_017633 (Escherichia coli ETEC H10407) |
3e-39 |
46 |
|
Type III secretion apparatus protein EpaR |
NC_017663 (Escherichia coli P12b) |
3e-39 |
46 |
|
type III secretion protein EpaR |
NC_013353 (Escherichia coli 12009) |
7e-39 |
46 |
|
putative Type III secretion protein EpaR |
NC_011741 (Escherichia coli IAI1) |
7e-39 |
46 |
|
type III secretion apparatus protein EpaR |
NC_009801 (Escherichia coli E24377A) |
5e-38 |
45 |
|
type III secretion apparatus SpaR |
NC_007712 (Sodalis glossinidius morsitans) |
1e-30 |
48 |
|
type III secretion apparatus protein SpaR/YscT/HrcT |
NC_010660 (Shigella boydii CDC 3083-94) |
2e-29 |
50 |
|
Spa29 |
NC_007607 (Shigella dysenteriae Sd197) |
6e-29 |
50 |
|
Spa29, component of the Mxi-Spa secretion machinery |
NC_017319 (Shigella flexneri 2002017) |
6e-29 |
50 |
|
Mxi-Spa secretion machinery protein Spa29 |
NC_004851 (Shigella flexneri 301) |
6e-29 |
50 |
|
Spa29 |
NC_007385 (Shigella sonnei Ss046) |
6e-29 |
50 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_003197_P3' AND ph.id_pai_orf='29' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc