Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III effector Hop protein |
NC_018080 (Pseudomonas aeruginosa DK2) |
1e-38 |
97 |
|
type III effector Hop protein |
NC_021577 (Pseudomonas aeruginosa RP73) |
2e-38 |
98 |
|
hypothetical protein |
NC_020912 (Pseudomonas aeruginosa B136-33) |
2e-38 |
95 |
|
hypothetical protein |
NC_009656 (Pseudomonas aeruginosa PA7) |
4e-37 |
95 |
|
type III effector Hop protein |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
5e-37 |
96 |
|
Plasmid hypothetical protein, RAQPRD |
NC_021149 (Azotobacter vinelandii CA) |
1e-29 |
75 |
|
Plasmid hypothetical protein, RAQPRD |
NC_021150 (Azotobacter vinelandii CA6) |
1e-29 |
75 |
|
hypothetical protein |
NC_012560 (Azotobacter vinelandii DJ) |
1e-29 |
75 |
|
integrative conjugative element protein |
NC_004129 (Pseudomonas protegens Pf-5) |
6e-26 |
66 |
|
hypothetical protein |
NC_004578 (Pseudomonas syringae DC3000) |
3e-25 |
59 |
|
hypothetical protein |
NC_007005 (Pseudomonas syringae B728a) |
1e-24 |
60 |
|
hypothetical protein |
NC_008782 (Acidovorax sp. JS42) |
4e-17 |
47 |
|
hypothetical protein |
NC_007508 (Xanthomonas campestris 85-10) |
4e-17 |
47 |
|
Candidate type III effector Hop protein |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
5e-17 |
46 |
|
signal peptide |
NC_009138 (Herminiimonas arsenicoxydans ) |
5e-17 |
46 |
|
hypothetical protein |
NC_009719 (Parvibaculum lavamentivorans DS-1) |
1e-16 |
47 |
|
plasmid protein raqprd |
NC_011992 (Acidovorax ebreus TPSY) |
1e-16 |
45 |
|
hypothetical protein |
NC_010002 (Delftia acidovorans SPH-1) |
2e-16 |
47 |
|
hypothetical protein |
NC_007086 (Xanthomonas campestris 8004) |
2e-16 |
48 |
|
Hypothetical Protein |
NC_020815 (Xanthomonas citri Aw12879) |
2e-16 |
48 |
|
hypothetical protein |
NC_007973 (Cupriavidus metallidurans CH34) |
3e-16 |
48 |
|
plasmid Ignore, RAQPRD family |
NC_011770 (Pseudomonas aeruginosa LESB58) |
3e-16 |
48 |
|
hypothetical protein |
NC_010688 (Xanthomonas campestris B100) |
4e-16 |
48 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
4e-16 |
46 |
|
hypothetical protein |
NC_017532 (Pseudomonas stutzeri DSM 4166) |
8e-16 |
46 |
|
hypothetical protein |
NC_017958 (Tistrella mobilis KA081020-065) |
1e-15 |
49 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
1e-15 |
45 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
2e-15 |
46 |
|
hypothetical protein |
NC_009512 (Pseudomonas putida F1) |
5e-15 |
50 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
7e-15 |
46 |
|
hypothetical protein |
NC_021491 (Pseudomonas putida H8234) |
8e-15 |
42 |
|
hypothetical protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
7e-14 |
48 |
|
hypothetical protein |
NC_010501 (Pseudomonas putida W619) |
2e-13 |
46 |
|
hypothetical protein |
NC_021491 (Pseudomonas putida H8234) |
2e-13 |
44 |
|
putative type III effector Hop protein |
NC_017845 (Pectobacterium sp. SCC3193) |
3e-13 |
41 |
|
hypothetical protein |
NC_016830 (Pseudomonas fluorescens F113) |
4e-13 |
47 |
|
hypothetical protein |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
7e-13 |
47 |
|
hypothetical protein |
NC_020800 (Xanthomonas axonopodis Xac29-1) |
6e-12 |
41 |
|
Hypothetical Protein |
NC_020815 (Xanthomonas citri Aw12879) |
6e-12 |
41 |
|
hypothetical protein |
NC_010501 (Pseudomonas putida W619) |
7e-12 |
42 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
4e-10 |
42 |
|
hypothetical protein |
NC_020833 (Mannheimia haemolytica USDA-ARS-USMARC-183) |
8e-09 |
41 |
|
hypothetical protein |
NC_020834 (Mannheimia haemolytica USDA-ARS-USMARC-185) |
8e-09 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='EF611301' AND ph.id_pai_orf='29' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc