Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Type III secretion component protein SctO |
NC_005126 (Photorhabdus luminescens TTO1) |
4e-53 |
95 |
|
type iii secretion component protein scto |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
7e-39 |
84 |
|
type III secretion YscO fmaily protein |
NC_010635 (Yersinia pseudotuberculosis PB1/+) |
4e-21 |
49 |
|
putative type III secretion protein YscO |
NC_005813 (Yersinia pestis 91001) |
2e-20 |
50 |
|
type III secretion protein YscO |
NC_010157 (Yersinia pestis Angola) |
2e-20 |
50 |
|
type III secretion protein |
NC_008122 (Yersinia pestis Antiqua) |
2e-20 |
50 |
|
type III secretion apparatus component |
NC_003131 (Yersinia pestis CO92) |
2e-20 |
50 |
|
type III secretion apparatus component |
NC_017153 (Yersinia pestis D106004) |
2e-20 |
50 |
|
type III secretion apparatus component |
NC_017157 (Yersinia pestis D182038) |
2e-20 |
50 |
|
type III secretion protein |
NC_009377 (Yersinia pestis Pestoides F) |
2e-20 |
50 |
|
type III secretion apparatus component |
NC_014017 (Yersinia pestis Z176003) |
2e-20 |
50 |
|
yscO; type III secretion protein |
NC_006153 (Yersinia pseudotuberculosis IP 32953) |
2e-20 |
50 |
|
type III secretion system translocation protein |
NC_008791 (Yersinia enterocolitica 8081) |
5e-20 |
49 |
|
type III secretion system translocation protein |
NC_015475 (Yersinia enterocolitica 105.5R(r)) |
2e-19 |
48 |
|
type III secretion spans bacterial envelope protein (YscO) |
NC_017565 (Yersinia enterocolitica Y11) |
2e-19 |
48 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY144116' AND ph.id_pai_orf='29' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc