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PAthogenisity Island DataBase (PAI DB)

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Homologs of ABK1_0260 gene of NC_017162_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ABK1_0260
( YP_005512832.1 )

Putative transposase TnpA2

NC_017162
(Acinetobacter baumannii 1656-2)

0.0

100

2) ABK1_0263
( YP_005512835.1 )

Transposase TnpA1

NC_017162
(Acinetobacter baumannii 1656-2)

1e-132

• Sequence Alignments

1) ABK1_0260 in NC_017162


> NC_017162_R1|28|G28|384130220|YP_005512832.1|Acinetobacter_baumannii_1656-2|+|26036..27307|-|ABK1_0260|Putative 
transposase 
TnpA2
Length=423

 Score =  667 bits (2521),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/423 (100%), Positives = 423/423 (100%), Gaps = 0/423 (0%)

Query  1    MKQQQDTrfssaferffsaaeLDALGKQSGFMKRRRQVTPQKFCMALVSALGAGTTNSIA  60
            MKQQQDTRFSSAFERFFSAAELDALGKQSGFMKRRRQVTPQKFCMALVSALGAGTTNSIA
Sbjct  1    MKQQQDTRFSSAFERFFSAAELDALGKQSGFMKRRRQVTPQKFCMALVSALGAGTTNSIA  60

Query  61   DVHRQFNHMHSTDIKLKPFHKQLVKMAAPEFMREVFEKALALHLPDMFAIRNKYQDMFKR  120
            DVHRQFNHMHSTDIKLKPFHKQLVKMAAPEFMREVFEKALALHLPDMFAIRNKYQDMFKR
Sbjct  61   DVHRQFNHMHSTDIKLKPFHKQLVKMAAPEFMREVFEKALALHLPDMFAIRNKYQDMFKR  120

Query  121  IILQDGTSFAVHDDLMFYFPGRFNENSPAAVELHVTYDVFKGQPDGVSLTEDTAPERDYL  180
            IILQDGTSFAVHDDLMFYFPGRFNENSPAAVELHVTYDVFKGQPDGVSLTEDTAPERDYL
Sbjct  121  IILQDGTSFAVHDDLMFYFPGRFNENSPAAVELHVTYDVFKGQPDGVSLTEDTAPERDYL  180

Query  181  PSPASLSGCLFMADAGYFSKAYIQQLQEACAYFIMRMCNRVNPMAVCTKTQQMKPLKTWL  240
            PSPASLSGCLFMADAGYFSKAYIQQLQEACAYFIMRMCNRVNPMAVCTKTQQMKPLKTWL
Sbjct  181  PSPASLSGCLFMADAGYFSKAYIQQLQEACAYFIMRMCNRVNPMAVCTKTQQMKPLKTWL  240

Query  241  KELPNAGVLDLDVQWPNGPVYRCVAFAALDHKKRHVLVCTNLDREQFPPAVVGDFYRVRW  300
            KELPNAGVLDLDVQWPNGPVYRCVAFAALDHKKRHVLVCTNLDREQFPPAVVGDFYRVRW
Sbjct  241  KELPNAGVLDLDVQWPNGPVYRCVAFAALDHKKRHVLVCTNLDREQFPPAVVGDFYRVRW  300

Query  301  QIELLFKEWKSMNNLNKFDTGHATIVETLIWGSLLAATLKRWLINAAQKKYNRVLSLFTG  360
            QIELLFKEWKSMNNLNKFDTGHATIVETLIWGSLLAATLKRWLINAAQKKYNRVLSLFTG
Sbjct  301  QIELLFKEWKSMNNLNKFDTGHATIVETLIWGSLLAATLKRWLINAAQKKYNRVLSLFTG  360

Query  361  AKTAHMWWIPFCFDIAMSRGTDLAKAMNNALAFLAQHCQRQNVKRDQISGVYKLLNNTNK  420
            AKTAHMWWIPFCFDIAMSRGTDLAKAMNNALAFLAQHCQRQNVKRDQISGVYKLLNNTNK
Sbjct  361  AKTAHMWWIPFCFDIAMSRGTDLAKAMNNALAFLAQHCQRQNVKRDQISGVYKLLNNTNK  420

Query  421  SLG  423
            SLG
Sbjct  421  SLG  423

2) ABK1_0263 in NC_017162


> NC_017162_R1|28|G28|384130220|YP_005512832.1|Acinetobacter_baumannii_1656-2|+|26036..27307|-|ABK1_0260|Putative 
transposase 
TnpA2
Length=423

 Score =  466 bits (1757),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 263/418 (63%), Positives = 343/418 (83%), Gaps = 0/418 (0%)

Query  1    MKQNQITAFSTIFEALFSEQQLNSLGVQTHMIERFRLITPAKLCLAFVCALGSGNARTIA  60
            MKQ+Q T FS+ FE +FS  +L++LG Q+  + R R +TP K+C+A+V ALG+G + +IA
Sbjct  1    MKQQQDTRFSSAFERFFSAAELDALGKQSGFMKRRRQVTPQKFCMALVSALGAGTTNSIA  60

Query  61   DIHRYFNHLHSMSVRLKPFHNQLVKLGTPEFMRQVFEQALALHLPAMHTFSDAYRGHFKQ  120
            D+HR FNH+HS  ++LKPFH+QLVK+++PEFMR+VFE+ALALHLP M ++ + Y++ FK+
Sbjct  61   DVHRQFNHMHSTDIKLKPFHKQLVKMAAPEFMREVFEKALALHLPDMFAIRNKYQDMFKR  120

Query  121  VLLQDGTSFAVHDGLSLHFPGRFSTHSPAAVELHVTYDLEKAQPVRVSLSEDTASERDYL  180
            ++LQDGTSFAVHD+L + FPGRF+ +SPAAVELHVTYD+ K+QP  VSL+EDTA+ERDYL
Sbjct  121  IILQDGTSFAVHDDLMFYFPGRFNENSPAAVELHVTYDVFKGQPDGVSLTEDTAPERDYL  180

Query  181  PVAQSLRGCLLMADAGYFSKAYIESLQNEAASFVLRMPASVNPMATCNQTGLCQPLRSWL  240
            P + SL GCL+MADAGYFSKAYI+ LQ+  A F++RM   VNPMA C +T   +PL++WL
Sbjct  181  PSPASLSGCLFMADAGYFSKAYIQQLQEACAYFIMRMCNRVNPMAVCTKTQQMKPLKTWL  240

Query  241  AVLPKHGELDLDVQWPDGPVYRCVLFASTDHKDKPVCLCTNLDRHTFPAATVGEWYRLRW  300
              LP+ G LDLDVQWP+GPVYRCV FA+ DHK + V +CTNLDR+ FP+A VG+ YR+RW
Sbjct  241  KELPNAGVLDLDVQWPNGPVYRCVAFAALDHKKRHVLVCTNLDREQFPPAVVGDFYRVRW  300

Query  301  QIELLFKEWKSLNSLNKFNTEYSTIAETLIWGSLLAATLKRWLINGAQQKYRRVLSMFSG  360
            QIELLFKEWKS+N+LNKF+T  +TI ETLIWGSLLAATLKRWLIN+AQ+KY RVLS+F+G
Sbjct  301  QIELLFKEWKSMNNLNKFDTGHATIVETLIWGSLLAATLKRWLINAAQKKYNRVLSLFTG  360

Query  361  AKTANQWWLPFCIKWACSGITEIAAELGKVFAFLAEHCQRVNVKRDQKSGAFKVLEIT  418
            AKTA+ WW+PFC+  A S  T++A  + + +AFLA+HCQR NVKRDQ SG +K+L+ T
Sbjct  361  AKTAHMWWIPFCFDIAMSRGTDLAKAMNNALAFLAQHCQRQNVKRDQISGVYKLLNNT  418