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Homologs of iusB gene of NC_016789_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) iusB
( YP_005134654.1 )

iron ABC transporter permease

NC_016785
(Corynebacterium diphtheriae CDCE 8392)

2e-33

100

2) iusB
( YP_005143745.1 )

iron ABC transporter permease

NC_016789
(Corynebacterium diphtheriae PW8)

2e-33

100

3) EIO_0434
( YP_003962898.1 )

ABC transporter permease

NC_014625
(Ketogulonicigenium vulgare Y25)

3e-17

4) SPAP_1166
( YP_003876757.1 )

Fe3+-siderophore ABC transporter permease

NC_014494
(Streptococcus pneumoniae AP200)

2e-06

5) ENC_14100
( YP_007845281.1 )

ABC-type cobalamin transport system, permease component

NC_021046
(Enterobacter cloacae NCTC 9394)

7e-06

• Sequence Alignments

1) iusB in NC_016785


> NC_016789_P2|28|G28|376255286|YP_005143745.1|Corynebacterium_diphtheriae_PW8|-|27391..27825|iusB|CDPW8_2197|iron 
ABC transporter 
permease
Length=144

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)

Query  1    MTGRGFDIIvpallplgvgallalaMGPTLNVFNLGAEAAQALGTNVGRANalglvaitl  60
            MTGRGFDIIVPALLPLGVGALLALAMGPTLNVFNLGAEAAQALGTNVGRANALGLVAITL
Sbjct  1    MTGRGFDIIVPALLPLGVGALLALAMGPTLNVFNLGAEAAQALGTNVGRANALGLVAITL  60

Query  61   lagaataaagpigFVGLVARSITGPDYKWVLPYSglagacllllaDIIGRLVMRPGELQA  120
            LAGAATAAAGPIGFVGLVARSITGPDYKWVLPYSGLAGACLLLLADIIGRLVMRPGELQA
Sbjct  61   LAGAATAAAGPIGFVGLVARSITGPDYKWVLPYSGLAGACLLLLADIIGRLVMRPGELQA  120

Query  121  GIVIALIGAPAFIWLVRHRKLVSI  144
            GIVIALIGAPAFIWLVRHRKLVSI
Sbjct  121  GIVIALIGAPAFIWLVRHRKLVSI  144

2) iusB in NC_016789


> NC_016789_P2|28|G28|376255286|YP_005143745.1|Corynebacterium_diphtheriae_PW8|-|27391..27825|iusB|CDPW8_2197|iron 
ABC transporter 
permease
Length=144

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)

Query  1    MTGRGFDIIvpallplgvgallalaMGPTLNVFNLGAEAAQALGTNVGRANalglvaitl  60
            MTGRGFDIIVPALLPLGVGALLALAMGPTLNVFNLGAEAAQALGTNVGRANALGLVAITL
Sbjct  1    MTGRGFDIIVPALLPLGVGALLALAMGPTLNVFNLGAEAAQALGTNVGRANALGLVAITL  60

Query  61   lagaataaagpigFVGLVARSITGPDYKWVLPYSglagacllllaDIIGRLVMRPGELQA  120
            LAGAATAAAGPIGFVGLVARSITGPDYKWVLPYSGLAGACLLLLADIIGRLVMRPGELQA
Sbjct  61   LAGAATAAAGPIGFVGLVARSITGPDYKWVLPYSGLAGACLLLLADIIGRLVMRPGELQA  120

Query  121  GIVIALIGAPAFIWLVRHRKLVSI  144
            GIVIALIGAPAFIWLVRHRKLVSI
Sbjct  121  GIVIALIGAPAFIWLVRHRKLVSI  144

3) EIO_0434 in NC_014625


> NC_016789_P2|28|G28|376255286|YP_005143745.1|Corynebacterium_diphtheriae_PW8|-|27391..27825|iusB|CDPW8_2197|iron 
ABC transporter 
permease
Length=144

 Score = 82.1 bits (292),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 92/120 (77%), Gaps = 4/120 (3%)

Query  1    MIAVGLGGRLNAVALGDDVGRSLGVKLGQTRALSFVAIALMCGGATAAAGPIGFVGLMVP  60
            ++A+++G  LN   LG + +++LG ++G++ AL++VAI+L+ G+ATAAAGPIGFVGL+  
Sbjct  21   LLALAMGPTLNVFNLGAEAAQALGTNVGRANALGLVAITLLAGAATAAAGPIGFVGLVA-  79

Query  61   HAVRLIVGPDWRWILPYCVGLGPVIVLASDILGRVVVPPGELEVGIVTAFIGAPVLLWLV  120
               R I GPD +W+LPY    G+ ++L +DI+GR+V+ PGEL+ GIV A+IGAP ++WLV
Sbjct  80   ---RSITGPDYKWVLPYSGLAGACLLLLADIIGRLVMRPGELQAGIVIALIGAPAFIWLV  136

4) SPAP_1166 in NC_014494


> NC_016789_P2|28|G28|376255286|YP_005143745.1|Corynebacterium_diphtheriae_PW8|-|27391..27825|iusB|CDPW8_2197|iron 
ABC transporter 
permease
Length=144

 Score = 46.1 bits (155),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 45/110 (41%), Positives = 72/110 (66%), Gaps = 4/110 (3%)

Query  1    MGDEMAVGLGVNVNRIRSLAIIASVLLCSSITAIGGPIGFVGLIVPHFCGLFISKDIRTM  60
            +G E A +LG NV R  +L+++A  LL ++ TA +GPIGFVGL+   + G     D + +
Sbjct  35   LGAEAAQALGTNVGRANALGLVAITLLAGAATAAAGPIGFVGLVARSITG----PDYKWV  90

Query  61   TISSSFIGAELLLICDIIGRMLGKPGEIEVGIITAIIGGPVLIYVTMKNR  110
               S++ GA LLL+ DIIGR++ +PGE++ GI+ A+IG+P +I +    +
Sbjct  91   LPYSGLAGACLLLLADIIGRLVMRPGELQAGIVIALIGAPAFIWLVRHRK  140

5) ENC_14100 in NC_021046


> NC_016789_P2|28|G28|376255286|YP_005143745.1|Corynebacterium_diphtheriae_PW8|-|27391..27825|iusB|CDPW8_2197|iron 
ABC transporter 
permease
Length=144

 Score = 44.0 bits (147),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 50/115 (44%), Positives = 75/115 (66%), Gaps = 6/115 (5%)

Query  15   AQPLNILALGETSARQLGMPIGFWRNVL-VIAIGWMVGVSVALAGAIGFIGLVIPHMLRL  73
            +  LN++ LG  +A+ LG  +G + N L ++AI  + G + A AG+IGF+GLV     R 
Sbjct  27   GPTLNVFNLGAEAAQALGTNVG-RANALGLVAITLLAGAATAAAGPIGFVGLVA----RS  81

Query  74   CGITDHRTLLPASAVAGAATLLVADIIARLALTAAELPIGVVTATLGAPVFIWLL  128
                D + +LP S++AGA  LL+ADII+RL + ++EL  G+V A +GAP FIWL+
Sbjct  82   ITGPDYKWVLPYSGLAGACLLLLADIIGRLVMRPGELQAGIVIALIGAPAFIWLV  136