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Homologs of VC0395_A1382 gene of NC_009457_P3

182

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CGSHiGG_04055
( YP_001292166.1 )

transcriptional regulator

NC_009567
(Haemophilus influenzae PittGG)

2e-13

2) PCNPT3_08010
( YP_007640378.1 )

DNA-binding protein

NC_020802
(Psychromonas sp. CNPT3)

3e-13

3) Nit79A3_1498
( YP_004694728.1 )

phage transcriptional regulator AlpA

NC_015731
(Nitrosomonas sp. Is79A3)

3e-13

4) NAL212_2044
( YP_004295042.1 )

phage transcriptional regulator, AlpA

NC_015222
(Nitrosomonas sp. AL212)

5e-13

5) K734_03205
( YP_008034142.1 )

transcriptional regulator

NC_021286
(Idiomarina loihiensis GSL 199)

7e-13

6) IL0640
( YP_155030.1 )

transcriptional regulator

NC_006512
(Idiomarina loihiensis L2TR)

7e-13

7) AHML_05600
( YP_008042251.1 )

putative transcriptional regulator

NC_021290
(Aeromonas hydrophila ML09-119)

4e-12

8) CV_0648
( NP_900318.1 )

prophage regulatory protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

6e-12

9) SVI_1340
( YP_003556089.1 )

DNA-binding protein

NC_014012
(Shewanella violacea DSS12)

7e-12

10) ASA_2928
( YP_001142681.1 )

prophage regulatory protein

NC_009348
(Aeromonas salmonicida A449)

9e-12

11) Shewmr4_2784
( YP_734912.1 )

phage transcriptional regulator, AlpA

NC_008321
(Shewanella sp. MR-4)

1e-11

12) Hhal_1156
( YP_001002734.1 )

phage transcriptional regulator AlpA

NC_008789
(Halorhodospira halophila SL1)

2e-11

13) AMBLS11_09640
( YP_006824960.1 )

phage transcriptional regulator AlpA

NC_018692
(Alteromonas macleodii Black Sea 11)

3e-11

14) Spea_1260
( YP_001501122.1 )

phage transcriptional regulator AlpA

NC_009901
(Shewanella pealeana ATCC 700345)

3e-11

15) K734_03200
( YP_008034141.1 )

prophage CP4-57 regulator

NC_021286
(Idiomarina loihiensis GSL 199)

3e-11

16) alpA
( YP_155029.1 )

prophage CP4-57 regulator

NC_006512
(Idiomarina loihiensis L2TR)

3e-11

17) SEEH1578_21295
( YP_008248310.1 )

Phage AlpA Prophage CP4-57 regulatory protein (AlpA)

NC_021810
(Salmonella enterica 41578)

4e-11

18) SU5_02999
( YP_006088611.1 )

Phage_AlpA Prophage CP4-57 regulatory protein (AlpA)

NC_017623
(Salmonella enterica B182)

4e-11

19) CFSAN002069_19815
( YP_008252705.1 )

DNA-binding protein

NC_021812
(Salmonella enterica CFSAN002069)

4e-11

20) Sbal223_0381
( YP_002356338.1 )

phage transcriptional regulator AlpA

NC_011663
(Shewanella baltica OS223)

4e-11

21) Shal_4049
( YP_001676248.1 )

phage transcriptional regulator AlpA

NC_010334
(Shewanella halifaxensis HAW-EB4)

4e-11

22) YE105_C2856
( YP_004299055.1 )

phage transcriptional regulator, AlpA

NC_015224
(Yersinia enterocolitica 105.5R(r))

6e-11

23) Sputcn32_3522
( YP_001185030.1 )

phage transcriptional regulator AlpA

NC_009438
(Shewanella putrefaciens CN-32)

7e-11

24) ECSF_2233
( YP_003350223.1 )

putative transcriptional regulator

NC_013654
(Escherichia coli SE15)

7e-11

25) Dd586_1466
( YP_003333039.1 )

phage transcriptional regulator AlpA

NC_013592
(Dickeya dadantii Ech586)

1e-10

26) Shew_1258
( YP_001093387.1 )

phage transcriptional regulator AlpA

NC_009092
(Shewanella loihica PV-4)

1e-10

27) Marme_2105
( YP_004313189.1 )

phage transcriptional regulator, AlpA

NC_015276
(Marinomonas mediterranea MMB-1)

1e-10

28) Pmen_1159
( YP_001186658.1 )

phage transcriptional regulator AlpA

NC_009439
(Pseudomonas mendocina ymp)

2e-10

29) F382_00585
( YP_008233008.1 )

DNA-binding protein

NC_021743
(Mannheimia haemolytica D153)

2e-10

30) J451_00555
( YP_008221519.1 )

DNA-binding protein

NC_021739
(Mannheimia haemolytica D174)

2e-10

31) MHH_c21210
( YP_007883922.1 )

putative bacteriophage transcriptional regulator

NC_021082
(Mannheimia haemolytica M42548)

2e-10

32) D650_15180
( YP_007666295.1 )

bacteriophage transcriptional regulator

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

2e-10

33) N220_07615
( YP_008338969.1 )

DNA-binding protein

NC_021883
(Mannheimia haemolytica USMARC_2286)

2e-10

34) alpA1
( YP_003039844.1 )

predicted phage transcriptional regulator

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

3e-10

35) alpA1
( YP_003042806.1 )

putative dna binding protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

3e-10

36) Pecwa_1687
( YP_003259081.1 )

phage transcriptional regulator, AlpA

NC_013421
(Pectobacterium wasabiae WPP163)

3e-10

37) W5S_0465
( YP_006281463.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

3e-10

38) Jann_1542
( YP_509484.1 )

phage transcriptional regulator, AlpA

NC_007802
(Jannaschia sp. CCS1)

3e-10

39) EC042_3997
( YP_006098282.1 )

prophage regulatory protein

NC_017626
(Escherichia coli 042)

3e-10

40) ECO26_4934
( YP_003231830.1 )

DNA binding transcriptional regulator

NC_013361
(Escherichia coli 11368)

3e-10

41) EcolC_1058
( YP_001724052.1 )

phage transcriptional regulator, AlpA

NC_010468
(Escherichia coli ATCC 8739)

3e-10

42) ECOK1_4794
( YP_006103846.1 )

prophage CP4-57 regulatory protein, AlpA family

NC_017628
(Escherichia coli IHE3034)

3e-10

43) ECOPMV1_04744
( YP_008574441.1 )

putative transcriptional regulator

NC_022370
(Escherichia coli PMV-1)

3e-10

44) EcSMS35_4006
( YP_001745969.1 )

AlpA family transcriptional regulator

NC_010498
(Escherichia coli SMS-3-5)

3e-10

45) EFER_0445
( YP_002381646.1 )

hypothetical protein

NC_011740
(Escherichia fergusonii ATCC 35469)

3e-10

46) SEEH1578_04875
( YP_008245048.1 )

prophage regulatory protein

NC_021810
(Salmonella enterica 41578)

3e-10

47) SBO_4169
( YP_410424.1 )

hypothetical protein

NC_007613
(Shigella boydii Sb227)

3e-10

48) Shewmr4_1700
( YP_733832.1 )

phage transcriptional regulator, AlpA

NC_008321
(Shewanella sp. MR-4)

3e-10

49) Dda3937_01305
( YP_003881185.1 )

DNA-binding protein

NC_014500
(Dickeya dadantii 3937)

4e-10

50) Dd586_3773
( YP_003335309.1 )

phage transcriptional regulator AlpA

NC_013592
(Dickeya dadantii Ech586)

4e-10

51) Dd703_3550
( YP_002989130.1 )

phage transcriptional regulator AlpA

NC_012880
(Dickeya dadantii Ech703)

4e-10

52) Dd1591_3697
( YP_003005981.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

4e-10

53) Dd1591_3709
( YP_003005992.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

4e-10

54) TY21A_13425
( YP_007926936.1 )

putative DNA binding transcriptional regulator

NC_021176
(Salmonella enterica Ty21a)

4e-10

55) Q7S_09575
( YP_005401716.1 )

putative prophage regulatory protein

NC_017047
(Rahnella aquatilis HX2)

5e-10

56) B479_23190
( YP_007231470.1 )

phage transcriptional regulator, AlpA

NC_019905
(Pseudomonas putida PC9)

5e-10

57) Ping_0243
( YP_941709.1 )

phage transcriptional regulator AlpA

NC_008709
(Psychromonas ingrahamii 37)

5e-10

58) KPK_1789
( YP_002237636.1 )

transcriptional regulator AlpA family

NC_011283
(Klebsiella pneumoniae 342)

5e-10

59) alpA1
( NP_992437.1 )

transcriptional regulator

NC_005810
(Yersinia pestis 91001)

5e-10

60) A1122_19325
( YP_005523499.1 )

AlpA family transcriptional regulator

NC_017168
(Yersinia pestis A1122)

5e-10

61) YpAngola_A1363
( YP_001605891.1 )

AlpA family transcriptional regulator

NC_010159
(Yersinia pestis Angola)

5e-10

62) YPA_0571
( YP_650484.1 )

transcriptional regulator

NC_008150
(Yersinia pestis Antiqua)

5e-10

63) YPC_1143
( YP_005623090.1 )

DNA-binding protein

NC_017265
(Yersinia pestis Harbin 35)

5e-10

64) YPN_2905
( YP_648832.1 )

transcriptional regulator

NC_008149
(Yersinia pestis Nepal516)

5e-10

65) YPDSF_2604
( YP_001163945.1 )

transcriptional regulator

NC_009381
(Yersinia pestis Pestoides F)

5e-10

66) Rahaq2_1737
( YP_005199750.1 )

putative transcriptional regulator

NC_016818
(Rahnella aquatilis CIP 78.65)

6e-10

67) t2651
( NP_806362.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

6e-10

68) I636_19330
( YP_008185805.1 )

hypothetical protein

NC_021714
(Alteromonas macleodii Ionian Sea UM4b)

6e-10

69) alpA
( YP_003883704.1 )

DNA-binding protein

NC_014500
(Dickeya dadantii 3937)

7e-10

70) KOX_24535
( YP_005020861.1 )

putative prophage regulatory protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

1e-09

71) PP1Y_AT16481
( YP_004534343.1 )

prophage regulatory protein

NC_015580
(Novosphingobium sp. PP1Y)

1e-09

72) Mesop_5508
( YP_004614015.1 )

phage transcriptional regulator AlpA

NC_015675
(Mesorhizobium opportunistum WSM2075)

9e-10

73) W5S_1631
( YP_006282595.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

1e-09

74) alpA
( YP_049728.1 )

prophage regulatory protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-09

75) Sbal223_0384
( YP_002356341.1 )

phage transcriptional regulator AlpA

NC_011663
(Shewanella baltica OS223)

2e-09

76) Despr_0272
( YP_004193747.1 )

phage transcriptional regulator, AlpA

NC_014972
(Desulfobulbus propionicus DSM 2032)

2e-09

77) PputGB1_4755
( YP_001670977.1 )

phage transcriptional regulator AlpA

NC_010322
(Pseudomonas putida GB-1)

2e-09

78) RPC_0150
( YP_530044.1 )

phage transcriptional regulator, AlpA

NC_007925
(Rhodopseudomonas palustris BisB18)

2e-09

79) Sala_3216
( YP_611148.1 )

phage transcriptional regulator, AlpA

NC_008036
(Sphingopyxis alaskensis RB2256)

2e-09

80) CKO_00903
( YP_001452489.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

3e-09

81) Dd586_2658
( YP_003334205.1 )

phage transcriptional regulator AlpA

NC_013592
(Dickeya dadantii Ech586)

3e-09

82) alpA2
( YP_002920255.1 )

putative transcriptional regulator

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

3e-09

83) YPDSF_1221
( YP_001162590.1 )

transcriptional regulator

NC_009381
(Yersinia pestis Pestoides F)

3e-09

84) YPTS_1706
( YP_001872132.1 )

phage transcriptional regulator AlpA

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-09

85) SeSA_A2907
( YP_002115719.1 )

hypothetical protein

NC_011094
(Salmonella enterica CVM19633)

3e-09

86) SARI_03879
( YP_001572815.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

3e-09

87) BBta_0434
( YP_001236626.1 )

prophage CP4-57 regulatory protein

NC_009485
(Bradyrhizobium sp. BTAi1)

3e-09

88) Dd1591_1496
( YP_003003833.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

4e-09

89) Tola_2395
( YP_002893578.1 )

phage transcriptional regulator, AlpA

NC_012691
(Tolumonas auensis DSM 9187)

4e-09

90) ENC_43950
( YP_007847603.1 )

Predicted transcriptional regulator

NC_021046
(Enterobacter cloacae NCTC 9394)

4e-09

91) ebD61
( YP_158418.1 )

transcriptional regulator

NC_006513
(Aromatoleum aromaticum EbN1)

5e-09

92) ENC_02870
( YP_007844426.1 )

Predicted transcriptional regulator

NC_021046
(Enterobacter cloacae NCTC 9394)

5e-09

93) PSEBR_a2011
( YP_004353256.1 )

AlpA family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

5e-09

94) A79E_4453
( YP_006638213.1 )

transcriptional regulator

NC_018522
(Klebsiella pneumoniae 1084)

6e-09

95) A464_4539
( YP_008325131.1 )

hypothetical protein

NC_021870
(Salmonella bongori N268-08)

6e-09

96) AciX8_1756
( YP_005057125.1 )

phage transcriptional regulator, AlpA

NC_016631
(Granulicella mallensis MP5ACTX8)

6e-09

97) Thivi_2364
( YP_006414434.1 )

putative transcriptional regulator

NC_018012
(Thiocystis violascens DSM 198)

7e-09

98) KP1_0641
( YP_002917564.1 )

hypothetical protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

7e-09

99) KPN_04704
( YP_001338321.1 )

hypothetical protein

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

7e-09

100) Alide2_3071
( YP_004388933.1 )

phage transcriptional regulator AlpA

NC_015422
(Alicycliphilus denitrificans K601)

7e-09

101) HS_1424
( YP_719636.1 )

phage transcriptional regulator, AlpA

NC_008309
(Haemophilus somnus 129PT)

8e-09

102) AvCA_40550
( YP_007894972.1 )

prophage CP4-57 regulatory protein

NC_021149
(Azotobacter vinelandii CA)

8e-09

103) AvCA6_40550
( YP_007900021.1 )

prophage CP4-57 regulatory protein

NC_021150
(Azotobacter vinelandii CA6)

8e-09

104) Avin_40550
( YP_002801165.1 )

prophage CP4-57 regulatory protein

NC_012560
(Azotobacter vinelandii DJ)

8e-09

105) lpa_00278
( YP_003617395.1 )

hypothetical protein

NC_014125
(Legionella pneumophila 2300/99 Alcoy)

9e-09

106) LPC_0208
( YP_001249552.1 )

prophage CP4-57 regulatory protein AlpA

NC_009494
(Legionella pneumophila Corby)

9e-09

107) PMI2608
( YP_002152324.1 )

prophage regulatory protein

NC_010554
(Proteus mirabilis HI4320)

1e-08

108) RSc1897
( NP_520018.1 )

hypothetical protein

NC_003295
(Ralstonia solanacearum GMI1000)

1e-08

109) NT08PM_0296
( YP_006239208.1 )

Vis

NC_017764
(Pasteurella multocida 3480)

1e-08

110) Mlg_1062
( YP_741904.1 )

phage transcriptional regulator, AlpA

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

1e-08

111) SARI_00214
( YP_001569303.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-08

112) CKO_03476
( YP_001454992.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

2e-08

113) Pecwa_1667
( YP_003259064.1 )

phage transcriptional regulator, AlpA

NC_013421
(Pectobacterium wasabiae WPP163)

2e-08

114) Tgr7_2812
( YP_002514872.1 )

phage transcriptional regulator AlpA

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

2e-08

115) Dd1591_0481
( YP_003002845.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

2e-08

116) Fphi_1931
( YP_001678565.1 )

phage transcriptional regulator, AlpA

NC_010336
(Francisella philomiragia ATCC 25017)

3e-08

117) KPK_4428
( YP_002240227.1 )

transcriptional regulator AlpA family

NC_011283
(Klebsiella pneumoniae 342)

3e-08

118) Mpe_A2332
( YP_001021523.1 )

phage transcriptional regulator, AlpA

NC_008825
(Methylibium petroleiphilum PM1)

3e-08

119) alpa
( YP_004713542.1 )

phage transcriptional regulator AlpA

NC_015740
(Pseudomonas stutzeri ATCC 17588)

3e-08

120) CKO_04347
( YP_001455839.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

4e-08

121) Ent638_2904
( YP_001177620.1 )

phage transcriptional regulator, AlpA

NC_009436
(Enterobacter sp. 638)

4e-08

122) Alide2_1737
( YP_004387641.1 )

phage transcriptional regulator AlpA

NC_015422
(Alicycliphilus denitrificans K601)

4e-08

123) Tmz1t_1000
( YP_002354662.1 )

phage transcriptional regulator AlpA

NC_011662
(Thauera sp. MZ1T)

4e-08

124) Neut_0125
( YP_746378.1 )

phage transcriptional regulator AlpA

NC_008344
(Nitrosomonas eutropha C91)

6e-08

125) NCGM2_1450
( YP_005979701.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

6e-08

126) SPO3898
( YP_167161.1 )

DNA-binding protein

NC_003911
(Ruegeria pomeroyi DSS-3)

6e-08

127) AXYL_01049
( YP_003977110.1 )

prophage CP4-57 regulatory protein AlpA

NC_014640
(Achromobacter xylosoxidans A8)

6e-08

128) A458_06100
( YP_006456889.1 )

phage transcriptional regulator AlpA

NC_018028
(Pseudomonas stutzeri CCUG 29243)

6e-08

129) ELI_00935
( YP_457076.1 )

hypothetical protein

NC_007722
(Erythrobacter litoralis HTCC2594)

8e-08

130) Ser39006_1276
( YP_008521658.1 )

phage transcriptional regulator, AlpA

NC_022268
(Serratia sp. ATCC 39006)

9e-08

131) YE0975A
( YP_001005309.1 )

hypothetical protein

NC_008800
(Yersinia enterocolitica 8081)

1e-07

132) SeSA_A0668
( YP_002113634.1 )

hypothetical protein

NC_011094
(Salmonella enterica CVM19633)

1e-07

133) ECED1_3320
( YP_002399199.1 )

putative regulatory protein from prophage (AlpA family)

NC_011745
(Escherichia coli ED1a)

1e-07

134) Maqu_0653
( YP_957938.1 )

phage transcriptional regulator AlpA

NC_008740
(Marinobacter aquaeolei VT8)

1e-07

135) ESA_00625
( YP_001436745.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

1e-07

136) Hneap_0482
( YP_003262384.1 )

phage transcriptional regulator AlpA

NC_013422
(Halothiobacillus neapolitanus c2)

1e-07

137) ETAF_2788
( YP_005700382.1 )

Transcriptional regulator, AlpA like protein

NC_017309
(Edwardsiella tarda FL6-60)

2e-07

138) O3M_06345
( YP_006768931.1 )

phage transcriptional regulator AlpA

NC_018650
(Escherichia coli 2009EL-2050)

2e-07

139) O3O_19350
( YP_006783038.1 )

phage transcriptional regulator AlpA

NC_018661
(Escherichia coli 2009EL-2071)

2e-07

140) O3K_06300
( YP_006777968.1 )

phage transcriptional regulator AlpA

NC_018658
(Escherichia coli 2011C-3493)

2e-07

141) PAGR_g2494
( YP_005993221.1 )

AlpA family phage transcriptional regulator

NC_017554
(Pantoea ananatis PA13)

3e-07

142) ECABU_c03460
( YP_006104481.1 )

putative phage transcriptional AlpA-like regulator

NC_017631
(Escherichia coli ABU 83972)

3e-07

143) ETEC_0317
( YP_006113906.1 )

putative prophage transcriptional regulator

NC_017633
(Escherichia coli ETEC H10407)

3e-07

144) EC55989_0270
( YP_002401396.1 )

Phage transcriptional regulator, AlpA

NC_011748
(Escherichia coli 55989)

3e-07

145) SerAS9_4092
( YP_004507452.1 )

phage transcriptional regulator, AlpA

NC_015567
(Serratia plymuthica AS9)

3e-07

146) SerAS12_4093
( YP_004502500.1 )

phage transcriptional regulator, AlpA

NC_015566
(Serratia sp. AS12)

3e-07

147) SerAS13_4093
( YP_006026914.1 )

phage transcriptional regulator AlpA

NC_017573
(Serratia sp. AS13)

3e-07

148) ETAC_14735
( YP_007630428.1 )

putative phage DNA binding protein

NC_020796
(Edwardsiella tarda C07-087)

4e-07

149) alpA
( YP_002389731.1 )

putative phage DNA binding protein

NC_011741
(Escherichia coli IAI1)

4e-07

150) Shewmr7_1765
( YP_737815.1 )

phage transcriptional regulator, AlpA

NC_008322
(Shewanella sp. MR-7)

4e-07

151) PC1_1597
( YP_003017175.1 )

phage transcriptional regulator, AlpA

NC_012917
(Pectobacterium carotovorum PC1)

5e-07

152) W5S_3564
( YP_006284506.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

8e-07

153) DSC_04295
( YP_004929553.1 )

phage transcriptional regulator, AlpA

NC_016147
(Pseudoxanthomonas spadix BD-a59)

8e-07

154) ETAC_13010
( YP_007630083.1 )

hypothetical protein

NC_020796
(Edwardsiella tarda C07-087)

9e-07

155) OA238_c14340
( YP_007699043.1 )

prophage regulatory protein-like protein

NC_020908
(Octadecabacter arcticus 238)

9e-07

156) alpA
( YP_007001340.1 )

Mu phage lytic protein AlpA

NC_004347
(Shewanella oneidensis MR-1)

9e-07

157) YE105_C0897
( YP_004297096.1 )

Regulatory protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-06

158) Y11_19541
( YP_006005453.1 )

phage DNA binding protein

NC_017564
(Yersinia enterocolitica Y11)

1e-06

159) Y11_40181
( YP_006007517.1 )

phage DNA binding protein

NC_017564
(Yersinia enterocolitica Y11)

1e-06

160) GLX_15270
( YP_004868309.1 )

phage transcriptional regulator

NC_016027
(Gluconacetobacter xylinus NBRC 3288)

1e-06

161) EC042_3972A
( YP_006098257.1 )

putative prophage regulatory protein

NC_017626
(Escherichia coli 042)

1e-06

162) Pecwa_1696
( YP_003259090.1 )

phage transcriptional regulator, AlpA

NC_013421
(Pectobacterium wasabiae WPP163)

1e-06

163) alpA
( YP_003467237.1 )

CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-06

164) alpA
( YP_003713511.1 )

prophage CP4-57 regulatory protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-06

165) XNC1_4250
( YP_003714346.1 )

phage-like protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-06

166) Spro_3885
( YP_001480109.1 )

phage transcriptional regulator AlpA

NC_009832
(Serratia proteamaculans 568)

2e-06

167) ECO26_2327
( YP_003229315.1 )

hypothetical protein

NC_013361
(Escherichia coli 11368)

2e-06

168) Snov_1964
( YP_003693883.1 )

phage transcriptional regulator AlpA

NC_014217
(Starkeya novella DSM 506)

2e-06

169) ECED1_1797
( YP_002397756.1 )

putative phage regulatory protein

NC_011745
(Escherichia coli ED1a)

3e-06

170) EC042_1766
( YP_006096079.1 )

putative prophage regulatory protein

NC_017626
(Escherichia coli 042)

3e-06

171) G2583_1388
( YP_003498966.1 )

DNA binding protein

NC_013941
(Escherichia coli CB9615)

3e-06

172) ECIAI39_2026
( YP_002407993.1 )

putative phage regulatory protein

NC_011750
(Escherichia coli IAI39)

3e-06

173) ECO55CA74_06775
( YP_006158513.1 )

putative DNA binding protein

NC_017656
(Escherichia coli RM12579)

3e-06

174) ECs1575
( NP_309602.1 )

DNA binding protein

NC_002695
(Escherichia coli Sakai)

3e-06

175) ECSP_1491
( YP_003077408.1 )

DNA binding protein

NC_013008
(Escherichia coli TW14359)

3e-06

176) CDCO157_1507
( YP_006312376.1 )

putative DNA binding protein

NC_017906
(Escherichia coli Xuzhou21)

3e-06

177) NH8B_1936
( YP_004847165.1 )

phage transcriptional regulator AlpA

NC_016002
(Pseudogulbenkiania sp. NH8B)

3e-06

178) Dda3937_00943
( YP_003884284.1 )

regulatory protein

NC_014500
(Dickeya dadantii 3937)

4e-06

179) A3UG_04565
( YP_006476360.1 )

regulatory protein

NC_018079
(Enterobacter cloacae SDM)

6e-06

180) Nitsa_1826
( YP_004168820.1 )

prophage cp4-57 regulatory

NC_014935
(Nitratifractor salsuginis DSM 16511)

6e-06

181) CFSAN002050_11655
( YP_008260247.1 )

AlpA family transcriptional regulator

NC_021818
(Salmonella enterica CFSAN002050)

1e-05

182) W5S_1816
( YP_006282779.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

2e-05

• Sequence Alignments

1) O3Y_08640 in NC_016944


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)

Query  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60
           MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  MDFCLKQR  68
           MDFCLKQR
Sbjct  61  MDFCLKQR  68

2) VCM66_1723 in NC_012578


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)

Query  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60
           MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  MDFCLKQR  68
           MDFCLKQR
Sbjct  61  MDFCLKQR  68

3) VCD_002586 in NC_012668


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)

Query  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60
           MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  MDFCLKQR  68
           MDFCLKQR
Sbjct  61  MDFCLKQR  68

4) VC1785 in NC_002505


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)

Query  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60
           MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  MDFCLKQR  68
           MDFCLKQR
Sbjct  61  MDFCLKQR  68

5) VC395_1899 in NC_012582


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)

Query  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60
           MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  MDFCLKQR  68
           MDFCLKQR
Sbjct  61  MDFCLKQR  68

6) VC0395_A1382 in NC_009457


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)

Query  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60
           MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  MDFCLKQR  68
           MDFCLKQR
Sbjct  61  MDFCLKQR  68

7) VV2250 in NC_005139


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score =  103 bits (374),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 59/68 (87%), Positives = 63/68 (93%), Gaps = 0/68 (0%)

Query  6   MGPQEIGGHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPESVSLGERAIAWVESEVDEW  65
           MG Q+IG HPMRFLKLKEVMEKTALSRSAIYRKMNDGEFP+SVSLGERAIAWVESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  66  MEMRLERR  73
           M+  L +R
Sbjct  61  MDFCLKQR  68

8) VCLMA_A1546 in NC_017270


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  58
           MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

9) Vch1786_I1278 in NC_016445


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  58
           MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

10) VS_1654 in NC_011753


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 91.5 bits (328),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 48/68 (71%), Positives = 60/68 (89%), Gaps = 0/68 (0%)

Query  1   MRTTGIGERPMRFLKLKEVIEKTALSRSAIYRKMDEGNFPVSVSLGDRAVAWVEEEVNNW  60
           M   +IGE+PMRFLKLKEV+EKTALSRSAIYRKM++G+FP SVSLG+RA+AWVE EV++W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  MEMRLAER  68
           M+  L +R
Sbjct  61  MDFCLKQR  68

11) VV0810 in NC_005139


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 83.4 bits (297),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 45/51 (89%), Positives = 51/51 (100%), Gaps = 0/51 (0%)

Query  1   MRFLKLKEVMEKTALSRSAIYRKMSDGEFPQSVSLGDRAVAWVESEVQDWV  51
           MRFLKLKEVMEKTALSRSAIYRKM+DGEFPQSVSLG+RA+AWVESEV++W+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

12) M636_02800 in NC_021822


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 80.2 bits (285),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 43/58 (75%), Positives = 53/58 (92%), Gaps = 0/58 (0%)

Query  1   MRFLKLKEVIEKTALSRSAIYRKMSEDAFPKSVNLGDRAVAWVESEVDDWMAKVLVNR  58
           MRFLKLKEV+EKTALSRSAIYRKM+++ FP+SV+LG+RA+AWVESEVD+WM   L +R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

13) CGSHiGG_04055 in NC_009567


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.9 bits (242),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 31/54 (58%), Positives = 44/54 (82%), Gaps = 0/54 (0%)

Query  7   QAERFIKLPEVMNKTGLGRSSIYRKMNTGDFPRSIQLNKNNIVWLESEVNAWMQ  60
           ++ RF+KL EVM+KT+L+RS+IYRKMN G+FP+S+ L    I W+ESEV+ WM+
Sbjct  9   HPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

14) PCNPT3_08010 in NC_020802


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.4 bits (240),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 27/51 (53%), Positives = 47/51 (93%), Gaps = 0/51 (0%)

Query  1   MKFIRLKDVIAKTGLARATIYKFMANDKFPKTISLGDRAVAWLDSDVDEWM  51
           M+F++LK+V+ KT+L+R++IY+ M ++ FP+++SLG+RA+AW++S+VDEWM
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

15) Nit79A3_1498 in NC_015731


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.4 bits (240),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  1   MKFVKLETVKSMTGLSRSSIYQLINEGRFPNQVNLGSRSVAWVASEIEDWMNNCIANR  58
           M+F+KL  V   T+LSRS+IY+ +N+G FP+ V+LG R++AWV SE+++WM+ C+ +R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

16) N175_11480 in NC_022223


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.1 bits (239),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 35/59 (60%), Positives = 49/59 (84%), Gaps = 1/59 (1%)

Query  1   MRFLRLKEVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWMESRLSMR  59
           MRFL+LKEVM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+  L  R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

17) VAA_01228 in NC_015633


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.1 bits (239),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 35/59 (60%), Positives = 49/59 (84%), Gaps = 1/59 (1%)

Query  1   MRFLRLKEVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWMESRLSMR  59
           MRFL+LKEVM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+  L  R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

18) O3Y_02325 in NC_016944


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.1 bits (239),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 34/59 (58%), Positives = 49/59 (84%), Gaps = 1/59 (1%)

Query  1   MRFLRLKDVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWMESRLSMR  59
           MRFL+LK+VM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+  L  R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

19) VCD_001110 in NC_012668


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.1 bits (239),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 34/59 (58%), Positives = 49/59 (84%), Gaps = 1/59 (1%)

Query  1   MRFLRLKDVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWMESRLSMR  59
           MRFL+LK+VM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+  L  R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

20) VC0497 in NC_002505


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 68.1 bits (239),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 34/59 (58%), Positives = 49/59 (84%), Gaps = 1/59 (1%)

Query  1   MRFLRLKDVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWMESRLSMR  59
           MRFL+LK+VM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+  L  R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

21) NAL212_2044 in NC_015222


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 67.9 bits (238),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 32/58 (56%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  1   MKFVKLETVKSMTGLSRSSIYQYINEGRFPNQVRLGSRSVAWVASEVDEWMNSCIANR  58
           M+F+KL  V   T+LSRS+IY+ +N+G FP+ V LG R++AWV SEVDEWM+ C+ +R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

22) VPBB_0171 in NC_019955


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 67.3 bits (236),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 32/53 (61%), Positives = 47/53 (89%), Gaps = 1/53 (1%)

Query  1   MRFLRLKDVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWME  53
           MRFL+LK+VM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMD  62

23) K734_03205 in NC_021286


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 67.3 bits (236),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 48/58 (83%), Gaps = 0/58 (0%)

Query  1   MKLMKVKEVMHVTSLARPTIYKYMAKGQFPKPVSLGGRAVAWVADEIDDWIMQCIAER  58
           M+++K+KEVM+ T+L+R++IY+ M  G+FP++VSLG RA+AWV  E+D+W+  C+ +R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

24) IL0640 in NC_006512


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 67.3 bits (236),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 48/58 (83%), Gaps = 0/58 (0%)

Query  1   MKLMKVKEVMHVTSLARPTIYKYMAKGQFPKPVSLGGRAVAWVADEIDDWIMQCIAER  58
           M+++K+KEVM+ T+L+R++IY+ M  G+FP++VSLG RA+AWV  E+D+W+  C+ +R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

25) vfu_A00206 in NC_016602


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 31/53 (59%), Positives = 47/53 (89%), Gaps = 1/53 (1%)

Query  3   MKFLRLKDVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWME  55
           M+FL+LK+VM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMD  62

26) VV0515 in NC_005139


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 66.3 bits (232),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 31/53 (59%), Positives = 47/53 (89%), Gaps = 1/53 (1%)

Query  3   MKFLRLKDVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWME  55
           M+FL+LK+VM  T+L+RS+IY+ M ++ +FP+SV+LG RA+AWVESE++EWM+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMD  62

27) AHML_05600 in NC_021290


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 64.7 bits (226),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 27/52 (52%), Positives = 44/52 (85%), Gaps = 0/52 (0%)

Query  1   MKLLKLKDVIAMTSLSKASVYRQMNDGKFPASVKIGPRSVAWVSSEIELWIE  52
           M++LKLK+V+  T+LS++++YR+MNDG FP SV +G R++AWV SE++ W++
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

28) CV_0648 in NC_005085


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 64.2 bits (224),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 25/60 (42%), Positives = 42/60 (70%), Gaps = 0/60 (0%)

Query  5   APSLTAQPLRFLRLPEVISTCGLSRSSVYDAIKRGSFPAPVPLGGKSVAWLSSEIDVWMA  64
              +  +P+RFL+L EV+   +LSRS++Y  ++ G FP +V+LG +++AW+ SE+D WM 
Sbjct  3   QQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

29) SVI_1340 in NC_014012


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 63.9 bits (223),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 32/51 (63%), Positives = 45/51 (89%), Gaps = 0/51 (0%)

Query  1   MRLIKLHEVMSSTGLARSTIYKYLEEGCFPKSVSLGARAVAWVESEVQEWI  51
           MR++KL EVM  T+L+RS+IY+ +++G FP+SVSLG RA+AWVESEV+EW+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

30) VEA_004310 in NC_013456


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 63.7 bits (222),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 45/56 (81%), Gaps = 0/56 (0%)

Query  4   KIIRLPEVIDMTGLSRSTIYLRMSQGSFPLSISLGERAVGWLKVDIEKWLDACVSA  59
           ++++L EV++ T+LSRS+IY +M++G FP S+SLGERA++W+  +++ W+D C+  
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQ  67

31) ASA_2928 in NC_009348


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 63.7 bits (222),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 49/61 (81%), Gaps = 1/61 (1%)

Query  7   EQHIAAPALRFIRVREAINRTGLSKSSIYDMMAQGQFPKTVRLGSGRSVAFIEAEIDAWM  66
           +Q+I+  ++RF++++E +++T+LS+S+IY  M +G+FP++V LG  R++A +E+E+D WM
Sbjct  3   QQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLG-ERAIAWVESEVDEWM  61

Query  67  A  67
            
Sbjct  62  D  62

32) Shewmr4_2784 in NC_008321


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 63.1 bits (220),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 24/51 (48%), Positives = 45/51 (89%), Gaps = 0/51 (0%)

Query  4   KIMRLPEVKSRTGLSRSSIYLRISKGEFPASISLGDRAVGWLEADIEQWLD  54
           ++++L EV  +T+LSRS+IY +++ GEFP S+SLG+RA++W+E+++++W+D
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

33) Hhal_1156 in NC_008789


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 62.6 bits (218),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 24/51 (48%), Positives = 44/51 (87%), Gaps = 0/51 (0%)

Query  14  RLLRINSVIKRVGLGRSTIYKKVKEGGFPKPIKLGERAIAWRESDIEEWIS  64
           R+L+++ V+ + +L+RS+IY+K+++G FP+++ LGERAIAW ES+++EW+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

34) AMBLS11_09640 in NC_018692


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 62.1 bits (216),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 28/51 (55%), Positives = 44/51 (87%), Gaps = 0/51 (0%)

Query  1   MRLIKIKEVIKMTSLSRATIYKYMADDSFPKPVSLGTKAVAWVEDEVENWI  51
           MR++K+KEV+  T+LSR++IY+ M D+ FP++VSLG +A+AWVE EV++W+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

35) M636_20505 in NC_021848


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 35/49 (72%), Positives = 42/49 (86%), Gaps = 0/49 (0%)

Query  1   MEKTELSRSAIYRKMNDDAFPKSVNLGDRAVAWVESEVDYWVESILLTR  49
           MEKT LSRSAIYRKMND+ FP+SV+LG+RA+AWVESEVD W++  L  R
Sbjct  20  MEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

36) Spea_1260 in NC_009901


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 28/51 (55%), Positives = 47/51 (93%), Gaps = 0/51 (0%)

Query  1   MKLIRLKDVIACTGLARSTIYKYIEEGIFPKSVSLGDRAVAWVENEVQEWI  51
           M++++LK+V+  T+L+RS+IY+ +++G FP+SVSLG+RA+AWVE+EV+EW+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

37) K734_03200 in NC_021286


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 26/51 (51%), Positives = 43/51 (85%), Gaps = 0/51 (0%)

Query  1   MRFLRINEVRERIGLGRTSIYKMVNEGTFPKPVRVLGKKVAWVDSEVDEWM  51
           MRFL+++EV E+ +L+R++IY+ +N+G FP++V +  + +AWV+SEVDEWM
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

38) alpA in NC_006512


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 26/51 (51%), Positives = 43/51 (85%), Gaps = 0/51 (0%)

Query  1   MRFLRINEVRERIGLGRTSIYKMVNEGTFPKPVRVLGKKVAWVDSEVDEWM  51
           MRFL+++EV E+ +L+R++IY+ +N+G FP++V +  + +AWV+SEVDEWM
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

39) VCM66_1732 in NC_012578


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 47/58 (82%), Gaps = 0/58 (0%)

Query  10  NMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIA  67
           ++ E+ +R+++++EV+  T+LSRS++YR +++ +FP  V LG RA+AWVE+EV+EW+ 
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

40) VCD_002564 in NC_012668


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 47/58 (82%), Gaps = 0/58 (0%)

Query  10  NMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIA  67
           ++ E+ +R+++++EV+  T+LSRS++YR +++ +FP  V LG RA+AWVE+EV+EW+ 
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

41) VC1809 in NC_002505


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 47/58 (82%), Gaps = 0/58 (0%)

Query  10  NMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIA  67
           ++ E+ +R+++++EV+  T+LSRS++YR +++ +FP  V LG RA+AWVE+EV+EW+ 
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

42) VC395_1924 in NC_012582


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 47/58 (82%), Gaps = 0/58 (0%)

Query  10  NMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIA  67
           ++ E+ +R+++++EV+  T+LSRS++YR +++ +FP  V LG RA+AWVE+EV+EW+ 
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

43) VC0395_A1406 in NC_009457


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 47/58 (82%), Gaps = 0/58 (0%)

Query  10  NMPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIA  67
           ++ E+ +R+++++EV+  T+LSRS++YR +++ +FP  V LG RA+AWVE+EV+EW+ 
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

44) SEEH1578_21295 in NC_021810


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.6 bits (214),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 51/62 (83%), Gaps = 0/62 (0%)

Query  4   LPRENAPQKSYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQVSIGSRSVAWVEHEVNEW  63
           + +++  + + R+L++ EV++ T+L++S+IY K++++EFP+ VS+G R++AWVE EV+EW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  64  IE  65
           ++
Sbjct  61  MD  62

45) SU5_02999 in NC_017623


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.6 bits (214),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 51/62 (83%), Gaps = 0/62 (0%)

Query  4   LPRENAPQKSYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQVSIGSRSVAWVEHEVNEW  63
           + +++  + + R+L++ EV++ T+L++S+IY K++++EFP+ VS+G R++AWVE EV+EW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  64  IE  65
           ++
Sbjct  61  MD  62

46) CFSAN002069_19815 in NC_021812


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.6 bits (214),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 51/62 (83%), Gaps = 0/62 (0%)

Query  4   LPRENAPQKSYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQVSIGSRSVAWVEHEVNEW  63
           + +++  + + R+L++ EV++ T+L++S+IY K++++EFP+ VS+G R++AWVE EV+EW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  64  IE  65
           ++
Sbjct  61  MD  62

47) Sbal223_0381 in NC_011663


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.3 bits (213),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 26/51 (51%), Positives = 46/51 (91%), Gaps = 0/51 (0%)

Query  1   MKLIKLKDVIASTGLGRSTIYKYIENGIFPKAVSLGCRSVAWVESEIQDWI  51
           M+++KLK+V+  T+L+RS+IY+ +++G FP++VSLG R++AWVESE+++W+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

48) Shal_4049 in NC_010334


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.3 bits (213),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 27/62 (44%), Positives = 47/62 (76%), Gaps = 0/62 (0%)

Query  1   MCPPDPKKQPNDLIKIKEVIQMTSLSRSTIYTKMNQQDFPKSISLSSRSVVWVRKELEDW  60
           M   D   +P  ++K+KEV++ T+LSRS+IY KMN+ +FP+S+SL+ R++ WV  E+++W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  IQ  62
           ++
Sbjct  61  MD  62

49) YE105_C2856 in NC_015224


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 61.0 bits (212),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 25/53 (48%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  2   AKRLIRLPDVMSITGLKRSTIYFKMKEGNFPNNIPIGERSVAWVEGEVINWIN  54
           + R+++L +VM  T+L RS+IY KM++G+FP+++++GER++AWVE+EV +W++
Sbjct  10  PMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

50) O3Y_08780 in NC_016944


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 60.8 bits (211),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 46/57 (81%), Gaps = 0/57 (0%)

Query  1   MPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIA  57
           + E+ +R+++++EV+  T+LSRS++YR +++ +FP  V LG RA+AWVE+EV+EW+ 
Sbjct  6   IGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

51) Vch1786_I1304 in NC_016445


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 60.8 bits (211),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 46/57 (81%), Gaps = 0/57 (0%)

Query  1   MPENNIRLIRFREVLTMTGLSRSSLYRFIEENQFPPQVQLGGRAVAWVEGEVQEWIA  57
           + E+ +R+++++EV+  T+LSRS++YR +++ +FP  V LG RA+AWVE+EV+EW+ 
Sbjct  6   IGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

52) Sputcn32_3522 in NC_009438


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 60.8 bits (211),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 28/51 (55%), Positives = 43/51 (85%), Gaps = 0/51 (0%)

Query  1   MKLIRLTKVMDYTGLARSTIYKYIAEGTFPKPVSLGSRAAAWVESEVQEWI  51
           M++++L  VM+ T+L+RS+IY+ + +G FP++VSLG RA AWVESEV+EW+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

53) ECSF_2233 in NC_013654


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 60.8 bits (211),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 50/62 (81%), Gaps = 0/62 (0%)

Query  4   LPRENAPQKRYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQVSIGSRSVAWVEHEVNEW  63
           + +++  +   R+L++ EV++ T+L++S+IY K++++EFP+ VS+G R++AWVE EV+EW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  64  IE  65
           ++
Sbjct  61  MD  62

54) Dd586_1466 in NC_013592


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 29/57 (51%), Positives = 45/57 (79%), Gaps = 0/57 (0%)

Query  5   QLLRLRQVEEKTGLKRSQIYLYMKDGTFPASIKIGPASVAWLESEIDEWINFKLANR  61
           ++L+L++V EKT+L RS IY  M+DG FP S+ +G  ++AW+ESE+DEW++F L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

55) Shew_1258 in NC_009092


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 59.7 bits (207),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 44/52 (85%), Gaps = 0/52 (0%)

Query  1   MKLIKLKEVLEMTSLSKATLYRMIKLGAFPEQLSIGGRAVAWVEDEVLNWIE  52
           M+++KLKEV+E T+LS++++YR ++ G FP+ +S+G RA+AWVE EV +W++
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

56) Marme_2105 in NC_015276


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 59.5 bits (206),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 27/51 (53%), Positives = 42/51 (83%), Gaps = 0/51 (0%)

Query  1   MRVMKLNEVINTTGLSRSSIYAYMSKGNFPKPIQLGPRAVAWIEEEVHKWL  51
           MR +KL+EV++ T+LSRS+IY  M+ G+FP+++ LG RA+AW+E EV+ W+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

57) VS_1668 in NC_011753


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 59.5 bits (206),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 43/50 (86%), Gaps = 0/50 (0%)

Query  7   RLIRLNEVLVMTGLSRSGMYRSIEKQQFPSQVPIGDRAVAWVESEVQDWV  56
           R+++L+EV+  T+LSRS++YR ++  +FP  V++G+RA+AWVESEV++W+
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

58) Pmen_1159 in NC_009439


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 59.2 bits (205),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 49/58 (85%), Gaps = 0/58 (0%)

Query  1   MRIIRLKEVTHLTGLARSTVYKYLAEGKFPKSVSLGHRSIGFLESEIQEWIMARIKER  58
           MR+++LKEV + T+L+RS++Y+ + +G FP+SVSLG+R+I+ +ESE++EW+   +K+R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

59) VCLMA_A1563 in NC_017270


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 59.2 bits (205),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 47/57 (83%), Gaps = 0/57 (0%)

Query  1   MSENNIRLIRFREVLAMTGLSRSSMYRFIEENQLPTQVQLGGRAVAWVESEVQEWIA  57
           ++E+ +R+++++EV+  T+LSRS++YR +++ ++P  V LG RA+AWVESEV+EW+ 
Sbjct  6   IGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

60) F382_00585 in NC_021743


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  9   RFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGANSKVWLESEIQQWIQ  59
           RF+K+ EV   T+LS + IYRKM+ G+FPQS+S+G  +  W+ESE+++W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

61) J451_00555 in NC_021739


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  9   RFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGANSKVWLESEIQQWIQ  59
           RF+K+ EV   T+LS + IYRKM+ G+FPQS+S+G  +  W+ESE+++W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

62) MHH_c21210 in NC_021082


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  9   RFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGANSKVWLESEIQQWIQ  59
           RF+K+ EV   T+LS + IYRKM+ G+FPQS+S+G  +  W+ESE+++W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

63) D650_15180 in NC_020833


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  9   RFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGANSKVWLESEIQQWIQ  59
           RF+K+ EV   T+LS + IYRKM+ G+FPQS+S+G  +  W+ESE+++W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

64) N220_07615 in NC_021883


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  9   RFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGANSKVWLESEIQQWIQ  59
           RF+K+ EV   T+LS + IYRKM+ G+FPQS+S+G  +  W+ESE+++W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

65) alpA1 in NC_012962


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.7 bits (203),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 27/49 (56%), Positives = 41/49 (84%), Gaps = 0/49 (0%)

Query  6   LIRLADVMKKVGLKKSWIYHLMQQGEFPKSVSLGARSVAWVEKEIDEWI  54
           +++L +VM K +L +S IY+ M++GEFP+SVSLG R++AWVE E+DEW+
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

66) alpA1 in NC_012962


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.7 bits (203),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 27/49 (56%), Positives = 41/49 (84%), Gaps = 0/49 (0%)

Query  6   LIRLADVMKKVGLKKSWIYHLMQQGEFPKSVSLGARSVAWVEKEIDEWI  54
           +++L +VM K +L +S IY+ M++GEFP+SVSLG R++AWVE E+DEW+
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

67) Pecwa_1687 in NC_013421


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.7 bits (203),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 28/57 (50%), Positives = 44/57 (78%), Gaps = 0/57 (0%)

Query  5   QLLRLKQVEVKTGLKRSQIYLYMKEGTFPSSIKIGPASVAWLESEIDEWINFKLANR  61
           ++L+LK+V  KT+L RS IY  M++G FP S+ +G  ++AW+ESE+DEW++F L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

68) W5S_0465 in NC_017845


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.7 bits (203),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 44/58 (76%), Gaps = 0/58 (0%)

Query  4   ITLIRLSGVMKKTGLRKSWIYLLMKQGEFPQTVKIGARSVAWVESEVNDWIAARISQR  61
           + +++L  VM KT+L +S IY  M++GEFPQ+V +G R++AWVESEV++W+   + QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

69) Jann_1542 in NC_007802


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.7 bits (203),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 23/55 (42%), Positives = 43/55 (79%), Gaps = 0/55 (0%)

Query  2   SHPDRIVRLTTVLDRTGLSRSTLYRKIAEGTFPAQLRISVHGAGWRESEIGEWID  56
            HP R+++L  V+++T+LSRS++YRK+ +G FP  + ++ ++ +W ESE++EW+D
Sbjct  8   EHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

70) EC042_3997 in NC_017626


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

71) EcolC_1058 in NC_010468


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

72) ECOK1_4794 in NC_017628


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

73) ECO26_4934 in NC_013361


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

74) ECOPMV1_04744 in NC_022370


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

75) EcSMS35_4006 in NC_010498


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

76) EFER_0445 in NC_011740


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

77) SEEH1578_04875 in NC_021810


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

78) SBO_4169 in NC_007613


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SEV  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

79) Shewmr4_1700 in NC_008321


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 23/54 (43%), Positives = 45/54 (84%), Gaps = 0/54 (0%)

Query  2   TPNIKLIRIKDVIDTTGLARSTIYKYVDKGIFPKAVTLGLRAVAWVESEIQGWI  55
              ++++++K+V++ T+L+RS+IY+ ++ G FP++V+LG RA+AWVESE++ W+
Sbjct  8   EHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

80) Dda3937_01305 in NC_014500


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  5   LTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPVKLGARSVAWVESEINDWIAERIRQR  62
           + +L+L +VM KT+L +S IY  ++ GEFPQ+V LG R++AWVESE+++W+   ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

81) Dd586_3773 in NC_013592


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  5   LTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPVKLGARSVAWVESEINDWIAERIRQR  62
           + +L+L +VM KT+L +S IY  ++ GEFPQ+V LG R++AWVESE+++W+   ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

82) Dd703_3550 in NC_012880


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  5   LTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPVKLGARSVAWVESEINDWIAERIRQR  62
           + +L+L +VM KT+L +S IY  ++ GEFPQ+V LG R++AWVESE+++W+   ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

83) Dd1591_3697 in NC_012912


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  5   LTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPVKLGARSVAWVESEINDWIAERIRQR  62
           + +L+L +VM KT+L +S IY  ++ GEFPQ+V LG R++AWVESE+++W+   ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

84) Dd1591_3709 in NC_012912


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  5   LTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPVKLGARSVAWVESEINDWIAERIRQR  62
           + +L+L +VM KT+L +S IY  ++ GEFPQ+V LG R++AWVESE+++W+   ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

85) TY21A_13425 in NC_021176


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  17  MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEITAW  74
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SE+  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  75  MA  76
           M 
Sbjct  61  MD  62

86) VV2261 in NC_005139


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 58.2 bits (201),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 27/56 (49%), Positives = 43/56 (77%), Gaps = 0/56 (0%)

Query  1   MPKPTIRLIRLNEVLGMTGLSRSCMYRFIEANQFPAQVPLGGRAVAWVESEVQEWV  56
           +    +R+++L+EV+  T+LSRS +YR ++  +FP  V+LG RA+AWVESEV+EW+
Sbjct  6   IGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

87) Q7S_09575 in NC_017047


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.9 bits (200),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 29/57 (51%), Positives = 46/57 (81%), Gaps = 0/57 (0%)

Query  5   QLLRLKQVEEKTGLKRSQIYLYMKDGTFPRSIKIGPASVAWLESEIDEWINIKLVRR  61
           ++L+LK+V EKT+L RS IY  M+DG FP+S+ +G  ++AW+ESE+DEW+++ L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

88) B479_23190 in NC_019905


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.9 bits (200),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 28/64 (44%), Positives = 46/64 (72%), Gaps = 0/64 (0%)

Query  3   ESEELVMRVIRLKTVVEITGLARSTVYSYIAKGIFPKSISLGGRCVGWVESEVHTWIQAR  62
           +  E  MR ++LK V+E T+L+RS++Y  +  G FP+S+SLG R ++WVESEV+ W++  
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

Query  63  VTER  66
           + +R
Sbjct  65  LKQR  68

89) Ping_0243 in NC_008709


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.9 bits (200),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  1   MKILRLADVVKKTGLSRAMLYKLMKDGRFPLNLHISMRSVGWVDSEVEIWMENRLEMR  58
           M++L+L +V+ KT+LSR+ +Y+ M+DG FP ++ ++ R+++WV+SEV+ WM+  L  R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

90) KPK_1789 in NC_011283


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 31/68 (46%), Positives = 50/68 (74%), Gaps = 2/68 (2%)

Query  1   MLEQTMTTHQL--LRLKQVEEKTGLKRSQIYLYMKNGDFPRSIKIGPASVAWLESELDEW  58
           M +Q +  H +  L+LK+V EKT+L RS IY  M++G+FP+S+ +G  ++AW+ESE+DEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  59  INRKLSRR  66
           ++  L +R
Sbjct  61  MDFCLKQR  68

91) A1122_19325 in NC_017168


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  4   INLIRLPEVIEKIRLKKSSIYHLISLNQFPRPIKLGPRSVAWVESEVDEWVIIRINQR  61
           + +++L EV+EK  L +S+IY+ ++  +FP+++ LG R++AWVESEVDEW+ + ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

92) YpAngola_A1363 in NC_010159


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  4   INLIRLPEVIEKIRLKKSSIYHLISLNQFPRPIKLGPRSVAWVESEVDEWVIIRINQR  61
           + +++L EV+EK  L +S+IY+ ++  +FP+++ LG R++AWVESEVDEW+ + ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

93) YPA_0571 in NC_008150


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  4   INLIRLPEVIEKIRLKKSSIYHLISLNQFPRPIKLGPRSVAWVESEVDEWVIIRINQR  61
           + +++L EV+EK  L +S+IY+ ++  +FP+++ LG R++AWVESEVDEW+ + ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

94) YPC_1143 in NC_017265


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  4   INLIRLPEVIEKIRLKKSSIYHLISLNQFPRPIKLGPRSVAWVESEVDEWVIIRINQR  61
           + +++L EV+EK  L +S+IY+ ++  +FP+++ LG R++AWVESEVDEW+ + ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

95) alpA1 in NC_005810


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  4   INLIRLPEVIEKIRLKKSSIYHLISLNQFPRPIKLGPRSVAWVESEVDEWVIIRINQR  61
           + +++L EV+EK  L +S+IY+ ++  +FP+++ LG R++AWVESEVDEW+ + ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

96) YPN_2905 in NC_008149


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  4   INLIRLPEVIEKIRLKKSSIYHLISLNQFPRPIKLGPRSVAWVESEVDEWVIIRINQR  61
           + +++L EV+EK  L +S+IY+ ++  +FP+++ LG R++AWVESEVDEW+ + ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

97) YPDSF_2604 in NC_009381


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 46/58 (80%), Gaps = 0/58 (0%)

Query  4   INLIRLPEVIEKIRLKKSSIYHLISLNQFPRPIKLGPRSVAWVESEVDEWVIIRINQR  61
           + +++L EV+EK  L +S+IY+ ++  +FP+++ LG R++AWVESEVDEW+ + ++QR
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

98) Rahaq2_1737 in NC_016818


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 29/59 (50%), Positives = 47/59 (80%), Gaps = 0/59 (0%)

Query  3   PYQLLRLKQVEEKTGLKRSQIYLYMKGGTFPRSIKIGPASVAWLESEIDEWINIKLVRR  61
           P ++L+LK+V EKT+L RS IY  M++G FP+S+ +G  ++AW+ESE+DEW+++ L +R
Sbjct  10  PMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

99) t2651 in NC_004631


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 42/62 (68%), Gaps = 2/62 (3%)

Query  1   MPLPDITQE--RFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEITAW  58
           M   DI ++  RFL+L EVM+  +LSRS+IY  +  GEFP  VSLG + +AW++SE+  W
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  59  MA  60
           M 
Sbjct  61  MD  62

100) I636_19330 in NC_021714


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 23/49 (47%), Positives = 41/49 (84%), Gaps = 0/49 (0%)

Query  1   MRLPEVKAKTGFGRSTIYALMANGEFPRSIRIGARAVGWLESDIDQWIE  49
           ++L EV  KT+++RS+IY  M +GEFP+S+ +G RA++W+ES++D+W++
Sbjct  14  LKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

101) alpA in NC_014500


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 57.4 bits (198),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 28/57 (50%), Positives = 44/57 (78%), Gaps = 0/57 (0%)

Query  5   QLLRLRQVEEKTGLKRSQIYLYMKYGTFPASIKIGPASVAWLESEIDEWINFKLANR  61
           ++L+L++V EKT+L RS IY  M+ G FP S+ +G  ++AW+ESE+DEW++F L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

102) KOX_24535 in NC_016612


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 28/57 (50%), Positives = 45/57 (79%), Gaps = 0/57 (0%)

Query  5   QLLRLKQVEGKTGLKRSQIYLYMKDGTFPRSIKIGPASVAWLESEIDEWINIKLVRR  61
           ++L+LK+V  KT+L RS IY  M+DG FP+S+ +G  ++AW+ESE+DEW+++ L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

103) PP1Y_AT16481 in NC_015580


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MNEHEDRFLRMGDVTRKTGRSRAAIYRMIAEGTFPPQIPIGARAVGWRLSSVLEWME  57
           + EH  RFL++ +V  KT+ SR+AIYR + +G FP  +++G RA++W  S V EWM+
Sbjct  6   IGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

104) Mesop_5508 in NC_015675


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 56.8 bits (196),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 40/54 (75%), Gaps = 0/54 (0%)

Query  3   EPDRIIRLKTVLARTGLSRSTIYRKIAEGTFPAQIKISIKGAGWRESDVSRWIA  56
           +P R+++LK V+ +T+LSRS+IYRK+ +G FP  + ++ ++ +W ES+V  W+ 
Sbjct  9   HPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

105) W5S_1631 in NC_017845


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 27/57 (48%), Positives = 44/57 (78%), Gaps = 0/57 (0%)

Query  5   QLLRLKQVEVKTGLKRSQIYLYMKEGTFPSSIKIGPASVAWLESEIDEWINLKLANR  61
           ++L+LK+V  KT+L RS IY  M++G FP S+ +G  ++AW+ESE+DEW+++ L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

106) alpA in NC_004547


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 45/57 (79%), Gaps = 0/57 (0%)

Query  5   QLLRLKQVEVKTGLKRSQVYLYMKEGTFPRSIKIGPASVAWLESEIDEWINLKLANR  61
           ++L+LK+V  KT+L RS +Y  M++G FP+S+ +G  ++AW+ESE+DEW+++ L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

107) Sbal223_0384 in NC_011663


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 56.1 bits (193),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 28/51 (55%), Positives = 43/51 (85%), Gaps = 0/51 (0%)

Query  1   MKLIRQKEVMDCTGLGRSTIYNYIADKTFPKPVSLGLRAVAWVESEVQDWI  51
           M++++ KEVM+ T+L+RS+IY  + D  FP++VSLG RA+AWVESEV++W+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

108) Despr_0272 in NC_014972


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 56.1 bits (193),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 23/55 (42%), Positives = 39/55 (71%), Gaps = 0/55 (0%)

Query  5   APPKTLLRRPDVEKRTGLKRAHIYALMKQGEFPQAVPLAGRAVAWISDEIDNWIS  59
             P  +L+  +V  +T+L R+ IY  M++GEFPQ+V+L+ RA+AW+  E+D+W+ 
Sbjct  8   EHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

109) PputGB1_4755 in NC_010322


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 45/51 (89%), Gaps = 0/51 (0%)

Query  1   MKVIRLQQVMEMTGLGRSTVYKYVSGNWFPKPIPLGGRSVGWLESEVNEWI  51
           M+ ++L++VME T+L+RS++Y+ +++  FP++++LG R+++W+ESEV+EW+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

110) RPC_0150 in NC_007925


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 22/53 (42%), Positives = 39/53 (74%), Gaps = 0/53 (0%)

Query  4   PDRIIRLKTVLSRTGLSRSTIYRKITEGTFPAQIRISVNGAGWHESEINRWIA  56
           P R+++LK V+ +T+LSRS+IYRK+ +G FP  + ++  + +W ESE++ W+ 
Sbjct  10  PMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

111) Sala_3216 in NC_008036


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 21/51 (42%), Positives = 39/51 (77%), Gaps = 0/51 (0%)

Query  6   RIIRLKTVLDRTGLSRSTIYRKIAEGTFPTQVKISVHGAGWHESAINRWIA  56
           R+++LK V+++T+LSRS+IYRK+ +G FP  V ++ ++ +W ES ++ W+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

112) Bphy_3413 in NC_010623


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.5 bits (191),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 42/50 (84%), Gaps = 0/50 (0%)

Query  6   RLLRMPEVVRRTGMSSTTVYRRISDGTFPRPVSLGCNRVAWLESEIDAWI  55
           R+L++ EV+ +T++S +++YR+++DG FP++VSLG   +AW+ESE+D W+
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

113) CKO_00903 in NC_009792


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 45/57 (79%), Gaps = 0/57 (0%)

Query  5   QLLRLRQVEQKTGLKRSQIYLYMKEGAFPRSIKIGPASVAWLESEIDEWINKKLSDR  61
           ++L+L++V +KT+L RS IY  M++G FP+S+ +G  ++AW+ESE+DEW++  L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

114) Dd586_2658 in NC_013592


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 43/57 (76%), Gaps = 0/57 (0%)

Query  5   QLLRLKQVEVKTGLKRSQIYLYMKEGTFPSSIKIGPASVAWLESEIDGWINLKLANR  61
           ++L+LK+V  KT+L RS IY  M++G FP S+ +G  ++AW+ESE+D W+++ L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

115) alpA2 in NC_012731


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 45/57 (79%), Gaps = 0/57 (0%)

Query  5   QLLRLRQVEQKTGLKRSQIYLYMKEGAFPRSIKIGPASVAWLESEIDEWINKKLSDR  61
           ++L+L++V +KT+L RS IY  M++G FP+S+ +G  ++AW+ESE+DEW++  L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

116) YPDSF_1221 in NC_009381


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 45/57 (79%), Gaps = 0/57 (0%)

Query  5   QLLRLRQVEQKTGLKRSQIYLYMKEGAFPRSIKIGPASVAWLESEIDEWINKKLSDR  61
           ++L+L++V +KT+L RS IY  M++G FP+S+ +G  ++AW+ESE+DEW++  L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

117) YPTS_1706 in NC_010634


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 45/57 (79%), Gaps = 0/57 (0%)

Query  5   QLLRLRQVEQKTGLKRSQIYLYMKEGAFPRSIKIGPASVAWLESEIDEWINKKLSDR  61
           ++L+L++V +KT+L RS IY  M++G FP+S+ +G  ++AW+ESE+DEW++  L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

118) SeSA_A2907 in NC_011094


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 45/56 (81%), Gaps = 0/56 (0%)

Query  3   NNQPTRLIRLPEVLQRTGYGKAWIYRLISEGRFPAPVKIGARAVAFVESEIDEWID  58
            ++P R+++L EV+++T+ +++ IYR +++G FP +V +G RA+A VESE+DEW+D
Sbjct  7   GEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

119) SARI_03879 in NC_010067


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 37/51 (73%), Gaps = 0/51 (0%)

Query  10  RFLRLPEVIHQCGLSRSTLYDLIARNAFPAQVSLGGKNVAWLQSEITAWME  60
           RFL+L EV+++ +LSRS++Y  +    FP  VSLG + +AW++SE+  WM+
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

120) BBta_0434 in NC_009485


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 21/51 (42%), Positives = 38/51 (75%), Gaps = 0/51 (0%)

Query  6   RIVRLKTVLARTGLSRSTIYRKIAEGTFPPQIKISVNGAGWRESDIDRWVA  56
           R+++LK V+ +T+LSRS+IYRK+ +G FP  + ++  + +W ES++D W+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

121) Dd1591_1496 in NC_012912


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.7 bits (188),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 27/57 (48%), Positives = 44/57 (78%), Gaps = 0/57 (0%)

Query  5   QLLRLRQVEEKTGLKRSQIYLYMKYGTFPASIKIGPASVAWLESEIDEWINLKLANR  61
           ++L+L++V EKT+L RS IY  M+ G FP S+ +G  ++AW+ESE+DEW+++ L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

122) Tola_2395 in NC_012691


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.7 bits (188),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 27/57 (48%), Positives = 41/57 (72%), Gaps = 0/57 (0%)

Query  13  RILRLDEVEAKSGFKRAHIYSLMKKGEFPQSLRLGVRAVGWDSTEIDLWITERLKNR  69
           R+L+L EV  K+++ R+ IY  M+ GEFPQS+ LG RA++W  +E+D W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

123) ENC_43950 in NC_021046


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.7 bits (188),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 36/51 (71%), Gaps = 0/51 (0%)

Query  10  RFIRLPEVMHMCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMA  60
           RF++L EVM+  +LSRS+IY  ++   FP+ +SLG + +AW +SE+  WM 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

124) SJA_C1-17980 in NC_014006


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 26/54 (49%), Positives = 38/54 (71%), Gaps = 0/54 (0%)

Query  7   RFLRINGVVEKTGRSRAAIYRMIADGTFPRQERIGVRAVGWRMSAVAKWMEAPL  60
           RFL+++ V+EKT+ SR+AIYR + DG FP+   +G RA++W  S V  WM+  L
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCL  65

125) ebD61 in NC_006513


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 27/57 (48%), Positives = 41/57 (72%), Gaps = 0/57 (0%)

Query  13  RILRLDEVEAKSGFKRAHIYSLMKKGEFPQALRLGVRAVGWDSTEVDLWISERLKNR  69
           R+L+L EV  K+++ R+ IY  M+ GEFPQ++ LG RA++W  +EVD W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

126) ENC_02870 in NC_021046


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 24/51 (48%), Positives = 36/51 (71%), Gaps = 0/51 (0%)

Query  10  RFLRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMA  60
           RFL+L EVM+  +LSRS+IY  ++   FP+ +SLG + +AW +SE+  WM 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

127) PSEBR_a2011 in NC_015379


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 42/57 (74%), Gaps = 0/57 (0%)

Query  16  RILRRSDVEQKTGIKRAHIYNLMSQGKFPKSIRLGVRAVGWHAAEVDQWIAERLQDR  72
           R+L+  +V +KT++ R+ IY  M++G FP+S+ LG RA++W  +EVD+W+   L++R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

128) A79E_4453 in NC_018522


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.2 bits (186),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  5   RFLRLRQVEDKIGFGKSWIYRQIQLQQFPPSIRLNSRHVAWLESEVDAWIH  55
           RFL+L++V +K ++++S IYR+++  +FP S+ L  R +AW+ESEVD W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

129) A464_4539 in NC_021870


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.2 bits (186),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  5   RFLRLRQVEDKIGFGKSWIYRQIQLQQFPPSIRLNSRHVAWLESEVDAWIH  55
           RFL+L++V +K ++++S IYR+++  +FP S+ L  R +AW+ESEVD W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

130) AciX8_1756 in NC_016631


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.2 bits (186),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 39/50 (78%), Gaps = 0/50 (0%)

Query  4   IIRLPAVLACTGLSRSSLYAQMAAKTFPQSISLGDRAVGWLQSEIESWQE  53
           +++L  V+  T+LSRS++Y +M    FPQS+SLG+RA++W++SE++ W +
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

131) Thivi_2364 in NC_018012


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 26/51 (51%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  12  RILRLPEVAARIGMSRSSVYLLMNRGQFPKSVKLSLRAVGWRESEIDEWAN  62
           R+L+L EV  + ++SRS++Y  MN G+FP+SV L+ RA++W ESE+DEW +
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

132) KPN_04704 in NC_009648


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  7   RFLRLRQVEDKIGFGKSWIYRQIQLQQFPPSIRLNSRHVAWLESEVDAWIH  57
           RFL+L++V +K ++++S IYR+++  +FP S+ L  R +AW+ESEVD W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

133) KP1_0641 in NC_012731


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  7   RFLRLRQVEDKIGFGKSWIYRQIQLQQFPPSIRLNSRHVAWLESEVDAWIH  57
           RFL+L++V +K ++++S IYR+++  +FP S+ L  R +AW+ESEVD W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

134) Alide2_3071 in NC_015422


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  1   MRILRLPAVSELTGLPRSTLYLYMSKGIFPKPIKLGVKSVGWIQEEVDQWL  51
           MR+L+L  V E T+L+RS++Y  M+ G FP+++ LG ++++W++ EVD+W+
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

135) VEA_001834 in NC_013456


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  2   LNFLNLEQVETKTTLCKSTIYKLMKNGEFPKNFTVSGKSKAWDEKEVEDWM  52
           + FL+L +V  KT+L +S+IY+ M++GEFP++ +++ ++ AW E EV++WM
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

136) HS_1424 in NC_008309


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 41/51 (81%), Gaps = 0/51 (0%)

Query  3   RILRIKDVCQKTGLPRSTIYARIKQGTFPAQLKLGARSSGWKESELDLWIE  53
           R+L++K+V +KT+L+RS+IY ++++G FP  + LG R+ +W ESE+D W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

137) AvCA6_40550 in NC_021150


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 1/61 (1%)

Query  1   MAATITPSHPIRRFIKRQAVEDITGLSCSEIYRRIAAGTFPAQVTLGPKSVVWIEAEVLA  60
           M+      HP+R F+K + V + T+LS S IYR++  G FP  V+LG +++ W+E+EV  
Sbjct  1   MGQQDIGEHPMR-FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDE  59

Query  61  W  61
           W
Sbjct  60  W  60

138) AvCA_40550 in NC_021149


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 1/61 (1%)

Query  1   MAATITPSHPIRRFIKRQAVEDITGLSCSEIYRRIAAGTFPAQVTLGPKSVVWIEAEVLA  60
           M+      HP+R F+K + V + T+LS S IYR++  G FP  V+LG +++ W+E+EV  
Sbjct  1   MGQQDIGEHPMR-FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDE  59

Query  61  W  61
           W
Sbjct  60  W  60

139) Avin_40550 in NC_012560


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 54.0 bits (185),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 1/61 (1%)

Query  1   MAATITPSHPIRRFIKRQAVEDITGLSCSEIYRRIAAGTFPAQVTLGPKSVVWIEAEVLA  60
           M+      HP+R F+K + V + T+LS S IYR++  G FP  V+LG +++ W+E+EV  
Sbjct  1   MGQQDIGEHPMR-FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDE  59

Query  61  W  61
           W
Sbjct  60  W  60

140) lpa_00278 in NC_014125


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 53.7 bits (184),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 43/52 (83%), Gaps = 1/52 (1%)

Query  4   KILKLPEVKERTAISRSRIYNLISEGLFPKPILLGGARAVGWIESEINEWIE  55
           ++LKL EV E+TA+SRS IY  +++G FP+++ L G RA++W+ESE++EW++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSL-GERAIAWVESEVDEWMD  62

141) LPC_0208 in NC_009494


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 53.7 bits (184),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 43/52 (83%), Gaps = 1/52 (1%)

Query  4   KILKLPEVKERTAISRSRIYNLISEGLFPKPILLGGARAVGWIESEINEWIE  55
           ++LKL EV E+TA+SRS IY  +++G FP+++ L G RA++W+ESE++EW++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSL-GERAIAWVESEVDEWMD  62

142) PMI2608 in NC_010554


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  68

143) RSc1897 in NC_003295


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 53.2 bits (182),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 21/52 (41%), Positives = 38/52 (74%), Gaps = 0/52 (0%)

Query  1   MKAINIKQVAEKVSLGQSTIYRMITKGEFPKPFSLGGNRTAWLDEDIDAWLA  52
           M+ +++K+V EK +L++S+IYR +  GEFP++ SLG    AW++ ++D W+ 
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

144) NT08PM_0296 in NC_017764


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 52.9 bits (181),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  9   RFINLDEVINRTSLKKTAIYSLIQKGLFPRPINLGINRTAWLESEIDHWIA  59
           RF++L EV+++T+L ++AIY  ++ G FP++++LG    AW+ESE+D+W+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

145) Mlg_1062 in NC_008340


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 52.9 bits (181),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 41/62 (67%), Gaps = 0/62 (0%)

Query  1   MTAQNATACPSRLMKKREVIDVTGLSESTIWRREQEGRFPPRIRLGQRMTVWRESDVHEW  60
           M  Q+    P R++K +EV++ T+LS S+I R+ ++G FP  + LG+R   W ES+V+EW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  61  LA  62
           + 
Sbjct  61  MD  62

146) SARI_00214 in NC_010067


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 46/57 (81%), Gaps = 0/57 (0%)

Query  1   MNNQATRLIRLPEVLERTGYGKAWIYRLISEGRFPAPVKIGVRAVAFVESEVDEWIQ  57
           + +++ R+++L EV+E+T+ +++ IYR +++G FP +V +G RA+A VESEVDEW++
Sbjct  6   IGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

147) CKO_03476 in NC_009792


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 39/51 (77%), Gaps = 0/51 (0%)

Query  7   RFLRLRQVEDKIGFGKSWIYRQIQLQQFPPFIRLNSRHVAWLESEVDAWIH  57
           RFL+L++V +K ++++S IYR+++  +FP  + L  R +AW+ESEVD W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

148) Pecwa_1667 in NC_013421


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 0/57 (0%)

Query  13  RILRRAEVEAKTGFKRAHIYNLMKEGKFPKALRLGVRAVGWDSAEIDQWITDRLKER  69
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W  +E+D+W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

149) Tgr7_2812 in NC_011901


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 0/57 (0%)

Query  15  RILRRAEVEAKTGFKRAHIYSLMKEGRFPKALRLGVRAVGWDSTEIDQWIADRLKER  71
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W  +E+D+W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

150) Dd1591_0481 in NC_012912


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 52.1 bits (178),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 0/57 (0%)

Query  13  RILRRAEVEAKTGFKRAHIYNLMKEGKFPKALHLGVRAVGWDSAEIDQWITDRLKER  69
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W  +E+D+W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

151) Fphi_1931 in NC_010336


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.9 bits (177),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  3   KIIRLKTVIEMTGLSRSTIYDYMARGLFPRQITLGENSRGWLYSEVDEWLE  53
           ++++LK V+E T+LSRS+IY  M  G FP+ ++LGE + +W+ SEVDEW++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

152) KPK_4428 in NC_011283


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.9 bits (177),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/52 (49%), Positives = 44/52 (85%), Gaps = 0/52 (0%)

Query  7   RLIRLSEVMNKTGFGKAWIYRLISQNRFPQPVKIGIRAIAFIESEIDEWIQL  58
           R+++L EVM+KT+++++ IYR +++  FPQ+V +G RAIA +ESE+DEW+++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDF  63

153) Mpe_A2332 in NC_008825


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.9 bits (177),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  15  RILRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIAERLKER  71
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W   E+++W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

154) alpa in NC_015740


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.9 bits (177),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  15  RILRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIAERLKER  71
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W   E+++W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

155) CKO_04347 in NC_009792


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 21/48 (44%), Positives = 37/48 (78%), Gaps = 0/48 (0%)

Query  5   RFLRLRQVLDKIGLKRSQVYAYMKTGHFLKSVRIGPASVVWLESEIDD  52
           RFL+L++V++K +L RS +Y  M+ G+F +SV +G  ++ W+ESE+D+
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDE  59

156) Ent638_2904 in NC_009436


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 44/57 (78%), Gaps = 0/57 (0%)

Query  1   MNNQNSRLIRLPEVMNKTGYCKAWVYRLISEGRFPAPVKIGVRAVAFVESEVDEWIQ  57
           + ++  R+++L EVM+KT+  ++ +YR +++G FP +V +G RA+A VESEVDEW++
Sbjct  6   IGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

157) Alide2_1737 in NC_015422


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  15  RILRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIADRLKER  71
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W   E+++W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

158) Tmz1t_1000 in NC_011662


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  15  RILRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIADRLKER  71
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W   E+++W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

159) Neut_0125 in NC_008344


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 51.1 bits (174),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 41/57 (72%), Gaps = 0/57 (0%)

Query  13  RILRREEVEAKTGFKRAHIYNLMKKGQFPKALRLGVRAVGWDSTEIDQWITERLNNR  69
           R+L+  EV  KT++ R+ IY  M+ G+FP+++ LG RA++W  +E+D+W+   L++R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

160) NCGM2_1450 in NC_017549


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.8 bits (173),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 37/51 (73%), Gaps = 0/51 (0%)

Query  13  RILRLEEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQWID  63
           R+L+L EV  K+++ R+ IY  M+  +FPQ++ LG RA++W   E+D+W+D
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

161) SPO3898 in NC_003911


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.8 bits (173),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 21/49 (43%), Positives = 34/49 (70%), Gaps = 0/49 (0%)

Query  6   LRRHAVEAVTGLSRSSIYAMMDAGDFPRPVRIGKRAVAWPQSAIEAWLA  54
           L+   V   T+LSRS+IY  M+ G+FP++V +G RA+AW +S ++ W+ 
Sbjct  14  LKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

162) AXYL_01049 in NC_014640


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.8 bits (173),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  13  RILRLDEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSVEIDQWIAERLNNR  69
           R+L+L EV  K+++ R+ IY  M+  +FPQ++ LG RA++W   E+D+W+   L++R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

163) A458_06100 in NC_018028


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.8 bits (173),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 39/57 (69%), Gaps = 0/57 (0%)

Query  15  RVLRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIADRLKER  71
           R L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W   E+++W+   LK+R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

164) ELI_00935 in NC_007722


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.5 bits (172),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 36/54 (67%), Gaps = 0/54 (0%)

Query  18  QVTRLIHLPEVQHRVGLGRSTIYRWMAEGKFPGPVELGGYSVAWEERAIDVWIS  71
           +  R++ L EV ++ +L+RS+IYR M +G FP +V LG  ++AW E  +D W+ 
Sbjct  9   HPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

165) Ser39006_1276 in NC_022268


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.5 bits (172),  Expect = 9e-08, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 42/51 (83%), Gaps = 0/51 (0%)

Query  5   RLIRLPEVMNKTGYSKAWIYRLISRGDFPEPIKIGIRASAFVESEIDEWIE  55
           R+++L EVM+KT+ S++ IYR ++ G+FP+++ +G RA A VESE+DEW++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

166) YE0975A in NC_008800


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.3 bits (171),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 26/51 (51%), Positives = 40/51 (79%), Gaps = 0/51 (0%)

Query  5   RLIRLPEVMNRTGYCKAWIYRLINDGKFPVPVKIGTRAVAFVESEVDAWVH  55
           R+++L EVM++T+  ++ IYR +NDG FP +V +G RA+A VESEVD W++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

167) Rpic12D_0635 in NC_012856


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.3 bits (171),  Expect = 9e-08, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  15  RILRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSMEVEQWIADRLNER  71
           R+L+  EV  KT++ R+ IY  M++G FP+++ LG RA++W   EV++W+   L++R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

168) SeSA_A0668 in NC_011094


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.0 bits (170),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 0/50 (0%)

Query  5   FIRLSEVQRRTGYSKAWIYRLIGQGKFPSSVKIGSRAIAFVESEVDDWIN  54
           F++L EV  +T+ S++ IYR + +G FP SV +G RAIA VESEVD+W++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

169) ECED1_3320 in NC_011745


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.0 bits (170),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 40/50 (80%), Gaps = 0/50 (0%)

Query  7   FIRLSEVMRRTGYGRAWIYRLISLGRFPKPVKIGPRSVAFIESEVDEWIN  56
           F++L EVM +T+ +R+ IYR ++ G FP++V +G R++A +ESEVDEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

170) Maqu_0653 in NC_008740


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.0 bits (170),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 26/55 (48%), Positives = 36/55 (66%), Gaps = 0/55 (0%)

Query  13  QHLDRMLRRKEVEAITGRSRSAIYEGMAAGTFPKPVKIGARAVAWPESAIRNWIA  67
           +H  R L+ KEV   T+ SRSAIY  M  G FP++V +G RA+AW ES + +W+ 
Sbjct  8   EHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

171) ESA_00625 in NC_009778


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 50.0 bits (170),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 21/49 (43%), Positives = 36/49 (74%), Gaps = 0/49 (0%)

Query  1   MRLPEVINICGLSRSTIYDLICREQFPSQISLGGKNVAWLASEIDDWMQ  49
           ++L EV++  +LSRS+IY  +   +FP  +SLG + +AW+ SE+D+WM+
Sbjct  14  LKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

172) Hneap_0482 in NC_013422


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 38/50 (76%), Gaps = 0/50 (0%)

Query  4   ILRLHDVLRITGASRSSIYLWVSAGIFPQPVKLGVRAVGWRRSEVQQWLD  53
           +L+L +V+  T+ SRS+IY  ++ G FPQ+V LG RA++W  SEV++W+D
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

173) RSKD131_2324 in NC_011963


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 24/51 (48%), Positives = 35/51 (69%), Gaps = 0/51 (0%)

Query  4   KHLRRPAVEEATGLSRSAIYELMSKGQFPRPVKLTGKAVAWPESAIAEWLA  54
           + L+   V E T+LSRSAIY  M+ G+FP++V L  +A+AW ES + EW+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

174) ETAF_2788 in NC_017309


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 46/62 (75%), Gaps = 2/62 (3%)

Query  1   MNTTDTTNQSL--IRLPEVLKRTGFGKAWIYRLISEGRFPAPVKIGVRAVAFVESEVDEW  58
           M   D  ++++  ++L EV+ +T+++++ IYR +++G FP +V +G RA+A VESEVDEW
Sbjct  1   MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW  60

Query  59  IQ  60
           ++
Sbjct  61  MD  62

175) O3M_06345 in NC_018650


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 49.0 bits (166),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 27/63 (43%), Positives = 45/63 (72%), Gaps = 7/63 (11%)

Query  15  NIPDSP-RILRLKDVMKKMGISRSTIYDWLNPKSPRYDGTFPKQKRLGRQSVGWLESELN  73
           +I + P R+L+LK+VM K ++SRS+IY  +N      DG FP+   LG ++++W+ESE++
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMN------DGEFPQSVSLGERAIAWVESEVD  58

Query  74  EWV  76
           EW+
Sbjct  59  EWM  61

176) O3O_19350 in NC_018661


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 49.0 bits (166),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 27/63 (43%), Positives = 45/63 (72%), Gaps = 7/63 (11%)

Query  15  NIPDSP-RILRLKDVMKKMGISRSTIYDWLNPKSPRYDGTFPKQKRLGRQSVGWLESELN  73
           +I + P R+L+LK+VM K ++SRS+IY  +N      DG FP+   LG ++++W+ESE++
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMN------DGEFPQSVSLGERAIAWVESEVD  58

Query  74  EWV  76
           EW+
Sbjct  59  EWM  61

177) O3K_06300 in NC_018658


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 49.0 bits (166),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 27/63 (43%), Positives = 45/63 (72%), Gaps = 7/63 (11%)

Query  15  NIPDSP-RILRLKDVMKKMGISRSTIYDWLNPKSPRYDGTFPKQKRLGRQSVGWLESELN  73
           +I + P R+L+LK+VM K ++SRS+IY  +N      DG FP+   LG ++++W+ESE++
Sbjct  5   DIGEHPMRFLKLKEVMEKTALSRSAIYRKMN------DGEFPQSVSLGERAIAWVESEVD  58

Query  74  EWV  76
           EW+
Sbjct  59  EWM  61

178) PAGR_g2494 in NC_017554


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.7 bits (165),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 25/51 (50%), Positives = 41/51 (81%), Gaps = 0/51 (0%)

Query  5   RLIRLPEVMNKTGYSKAWIYRLISKGVFPEPIKIGIRARAFVESEIDEWIE  55
           R+++L EVM+KT+ S++ IYR ++ G FP+++ +G RA A VESE+DEW++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

179) ECABU_c03460 in NC_017631


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.7 bits (165),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 25/53 (48%), Positives = 41/53 (78%), Gaps = 0/53 (0%)

Query  7   LIRLSEVQRRTGYSKAWIYRLISQGRFPKQVKIGSRAIAFVESEIDEWIEKCI  59
           +++L EV  +T+ S++ IYR +++G FP+ V +G RAIA VESE+DEW++ C+
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCL  65

180) ETEC_0317 in NC_017633


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.7 bits (165),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 25/53 (48%), Positives = 41/53 (78%), Gaps = 0/53 (0%)

Query  7   LIRLSEVQRRTGYSKAWIYRLISQGRFPKQVKIGSRAIAFVESEIDEWIEKCI  59
           +++L EV  +T+ S++ IYR +++G FP+ V +G RAIA VESE+DEW++ C+
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCL  65

181) EC55989_0270 in NC_011748


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 0/50 (0%)

Query  5   LIRLTEVQRRTGYSKAWIYRLMGQGKFPASVKIGSRAIAFVESEIDEWIN  54
           +++L EV  +T+ S++ IYR M +G FP SV +G RAIA VESE+DEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

182) SerAS12_4093 in NC_015566


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 0/50 (0%)

Query  5   LIRLPDVQRRTGYSKAWIYRLMSEGKFPASVKIGTRAIAFVESEVDEWVN  54
           +++L +V  +T+ S++ IYR M++G FP SV +G RAIA VESEVDEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

183) SerAS13_4093 in NC_017573


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 0/50 (0%)

Query  5   LIRLPDVQRRTGYSKAWIYRLMSEGKFPASVKIGTRAIAFVESEVDEWVN  54
           +++L +V  +T+ S++ IYR M++G FP SV +G RAIA VESEVDEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

184) SerAS9_4092 in NC_015567


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 0/50 (0%)

Query  5   LIRLPDVQRRTGYSKAWIYRLMSEGKFPASVKIGTRAIAFVESEVDEWVN  54
           +++L +V  +T+ S++ IYR M++G FP SV +G RAIA VESEVDEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

185) ETAC_14735 in NC_020796


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.4 bits (164),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 41/50 (82%), Gaps = 0/50 (0%)

Query  8   LIRLPEVLKRTGFGKAWIYRLISEGRFPAPVKIGVRAVAFVESEVDEWIQ  57
           +++L EV+ +T+++++ IYR +++G FP +V +G RA+A VESEVDEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

186) alpA in NC_011741


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.4 bits (164),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 41/50 (82%), Gaps = 0/50 (0%)

Query  8   LIRLPEVLKRTGFGKAWIYRLISEGRFPAPVKIGVRAVAFVESEVDEWIQ  57
           +++L EV+ +T+++++ IYR +++G FP +V +G RA+A VESEVDEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

187) Shewmr7_1765 in NC_008322


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 48.2 bits (163),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 24/56 (43%), Positives = 40/56 (72%), Gaps = 6/56 (10%)

Query  10  IIRLKKVMDLTGLSRSTIYDKINPASPRHDPLFPRKVGLGARAVGWYMQEVEQWLQ  65
           +++LK VM+ T+LSRS+IY K+N +       FP+ V+LG RA++W   EV++W++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGE------FPQSVSLGERAIAWVESEVDEWMD  62

188) PC1_1597 in NC_012917


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 44/57 (78%), Gaps = 0/57 (0%)

Query  6   RLIRFPEVMRKTGFGKAWLYRLINEERFPQPVKIGIRAVAFVENEIDEWIVVAIEKR  62
           R++++ EVM KT+++++ +YR +N+  FPQ+V +G RA+A VE+E+DEW+   + +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

189) BURPS1106A_3698 in NC_009076


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.4 bits (160),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 22/52 (43%), Positives = 39/52 (75%), Gaps = 1/52 (1%)

Query  14  RVLRIKDVVERTGLSRSTIYVLMKSDPTFPKKVGLSARTTGVIEHQLDAWIA  65
           R L++K+V+E+T+LSRS+IY  M +D  FP+ V+L+ R+ + +E ++D W+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMD  62

190) BPC006_I3751 in NC_018527


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.4 bits (160),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 22/52 (43%), Positives = 39/52 (75%), Gaps = 1/52 (1%)

Query  14  RVLRIKDVVERTGLSRSTIYVLMKSDPTFPKKVGLSARTTGVIEHQLDAWIA  65
           R L++K+V+E+T+LSRS+IY  M +D  FP+ V+L+ R+ + +E ++D W+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKM-NDGEFPQSVSLGERAIAWVESEVDEWMD  62

191) W5S_3564 in NC_017845


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.1 bits (159),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 21/51 (42%), Positives = 39/51 (77%), Gaps = 0/51 (0%)

Query  6   KLLRLAEVKGRTGYSKAWIYKLIAQNRFPQPIKIGSRSIAFIESEIDEWIN  56
           ++L+L EV  +T+ S++ IY+ + +  FPQ++ +G R+IA +ESE+DEW++
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

192) DSC_04295 in NC_016147


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.1 bits (159),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 37/57 (65%), Gaps = 0/57 (0%)

Query  15  RILRRDEVEAKTGFKRAHLYNLMRAGKFPKAIRLGIRAVGWDSLEVEQWIAERRKQR  71
           R+L+  EV  KT++ R+ +Y  M  G FP+++ LG RA++W   EV++W+    KQR
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

193) ETAC_13010 in NC_020796


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.1 bits (159),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 39/50 (78%), Gaps = 0/50 (0%)

Query  5   LIRLSEVQRRTGYSKAWIYRLLKENRFPQSIKIGSRSIAFVESEVDDWIN  54
           +++L EV  +T+ S++ IYR +++  FPQS+ +G R+IA VESEVD+W++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

194) OA238_c14340 in NC_020908


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.1 bits (159),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 21/49 (43%), Positives = 32/49 (66%), Gaps = 0/49 (0%)

Query  6   LRRPAVEAATGLSRSSLYAMMGSGDFPRPIRIGRRAVAWPESAVLAWLA  54
           L+   V   T+LSRS++Y  M  G+FP+++ +G RA+AW ES V  W+ 
Sbjct  14  LKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

195) alpA in NC_004347


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 47.1 bits (159),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 25/60 (42%), Positives = 40/60 (67%), Gaps = 9/60 (15%)

Query  11  IRLKTLVQLTGLSRSTIYDKLNPKSPRFDPLFPRKVCLGARAVGWYMQEVEQWLQGRRFC  70
           ++LK +++ T+LSRS+IY K+N      D  FP+ V LG RA++W   EV++W++   FC
Sbjct  14  LKLKEVMEKTALSRSAIYRKMN------DGEFPQSVSLGERAIAWVESEVDEWMD---FC  64

196) YE105_C0897 in NC_015224


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 40/50 (80%), Gaps = 0/50 (0%)

Query  6   LIRLPEVLKRTGFSRPWVYKLLKQKRFPPPIKIGGRAIAFVESEVNDWID  55
           +++L EV+ +T++SR+ +Y+ +++  FP ++ +G RAIA VESEV++W+D
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

197) Y11_19541 in NC_017564


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 40/50 (80%), Gaps = 0/50 (0%)

Query  6   LIRLPEVLKRTGFSRPWVYKLLKQKRFPPPIKIGGRAIAFVESEVNDWID  55
           +++L EV+ +T++SR+ +Y+ +++  FP ++ +G RAIA VESEV++W+D
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

198) Y11_40181 in NC_017564


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 40/50 (80%), Gaps = 0/50 (0%)

Query  6   LIRLPEVLKRTGFSRPWVYKLLKQKRFPPPIKIGGRAIAFVESEVNDWID  55
           +++L EV+ +T++SR+ +Y+ +++  FP ++ +G RAIA VESEV++W+D
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

199) GLX_15270 in NC_016027


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.6 bits (157),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 0/50 (0%)

Query  8   RLLTAKEVMTRTGLSRMTIYRYVKAGTFPAPRKLSAGAIRWHSGVIDSWI  57
           R+L  KEVM +T+LSR +IYR ++ G FP +  L+  AI W  + +D W+
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

200) EC042_3972A in NC_017626


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.6 bits (157),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 39/58 (68%), Gaps = 1/58 (1%)

Query  1   MRLIKLSEVMLRTGFKKTAIYSWVKTGTFPQPVKIG-RSARWSLEEVEAWIQNKLDSR  57
           MR++KL EVM +T++ ++AIY  ++ G FPQ+V +G R+  W   EV+ W++  L  R
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68

201) Pecwa_1696 in NC_013421


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.3 bits (156),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 40/50 (80%), Gaps = 0/50 (0%)

Query  6   RLIRFPEVMRKTGFGKAWLYRLISEERFPQPVKIGIRAVAFVEHEIDEWI  55
           R++++ EVM KT+++++ +YR +++  FPQ+V +G RA+A VE E+DEW+
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWM  61

202) alpA in NC_013892


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.3 bits (156),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 39/50 (78%), Gaps = 0/50 (0%)

Query  10  LIRLPEVQRRTGYSKAWIYKLISDGEFPKQIKLGSRSIAFIESEIDNWIA  59
           +++L EV  +T+ S++ IY+ ++DGEFP+ + LG R+IA +ESE+D+W+ 
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

203) alpA in NC_014228


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.3 bits (156),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 39/50 (78%), Gaps = 0/50 (0%)

Query  10  LIRLPEVQRRTGYSKAWIYKLISDGEFPKQIKLGSRSIAFIESEIDNWIA  59
           +++L EV  +T+ S++ IY+ ++DGEFP+ + LG R+IA +ESE+D+W+ 
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

204) XNC1_4250 in NC_014228


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.3 bits (156),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 38/50 (76%), Gaps = 0/50 (0%)

Query  11  LIRLPEVQRRTGYSKAWIYKLIGDGEFPKQVKIGARSIAFIESEVDDWIS  60
           +++L EV  +T+ S++ IY+ + DGEFP+ V +G R+IA +ESEVD+W+ 
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

205) Spro_3885 in NC_009832


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 46.1 bits (155),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 0/50 (0%)

Query  8   LIRLPAVQRRTGYSKAWIYRLMSQGKFPPSVKIGTRAIAFVEREIDDWVN  57
           +++L  V  +T+ S++ IYR M++G FP SV +G RAIA VE E+D+W++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

206) ECO26_2327 in NC_013361


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.6 bits (153),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 25/53 (48%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTALSRSCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    TALSRS  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

207) Snov_1964 in NC_014217


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.6 bits (153),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 0/50 (0%)

Query  9   LVSLNDVVKMTSLSRTAINIKRAAGTFPKAVSLGEKRVAFVRAEVMAWIE  58
           ++ L++V+  T+LSR+AI  K   G FP++VSLGE+ +A V +EV  W++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

208) ECED1_1797 in NC_011745


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 24/53 (46%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRSCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSRS  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

209) EC042_1766 in NC_017626


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSR+  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

210) ECIAI39_2026 in NC_011750


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSR+  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

211) ECs1575 in NC_002695


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSR+  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

212) ECSP_1491 in NC_013008


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSR+  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

213) G2583_1388 in NC_013941


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSR+  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

214) ECO55CA74_06775 in NC_017656


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSR+  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

215) CDCO157_1507 in NC_017906


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  6   RFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSVGWSLSEVLAWKDSC  58
           RF++ KE    T+LSR+  YR  + G+FP    LG R+++W  SEV  W D C
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFC  64

216) NH8B_1936 in NC_016002


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 36/57 (64%), Gaps = 1/57 (1%)

Query  1   MQLLTLKEVESKLGLKKTKIYLMIDKNEFPPPIKIGA-ASRWAENIVDEWIANRLKQ  56
           M++L LKEV  K +L ++ IY  ++  EFP ++ +G  A  W E+ VDEW+   LKQ
Sbjct  11  MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQ  67

217) Dda3937_00943 in NC_014500


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 44.8 bits (150),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 0/50 (0%)

Query  5   LIRLPEVQRRTGYSKAWVYRLMARKQFPSAVKIGSRAIAFVESEIDEWIN  54
           +++L EV  +T+ S++ +YR M   +FP +V +G RAIA VESE+DEW++
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

218) A3UG_04565 in NC_018079


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 44.2 bits (148),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 0/50 (0%)

Query  5   LIRLPEVQRRTGYSKAWIYRLLKERKFPQSVKIGSRSIAFVESEIDAWIT  54
           +++L EV  +T+ S++ IYR +++  FPQSV +G R+IA VESE+D W+ 
Sbjct  13  FLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

219) Nitsa_1826 in NC_014935


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 44.2 bits (148),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 37/51 (73%), Gaps = 1/51 (1%)

Query  11  RLLNIKQVSEKTSLGQTKIYEMIKLNEFPPPVKLG-RSRRWRESDIDRWIA  60
           R+L++K+V EKT+L+++ IY  ++  EFP +V LG R+  W ES++D W+ 
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

220) CFSAN002050_11655 in NC_021818


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 20/49 (41%), Positives = 34/49 (70%), Gaps = 1/49 (2%)

Query  1   MDLKEVCKAVGFKKVSIYSWMNAGEFPKSIKIG-RSVRWLSTEVEEWIA  48
           + LKEV    ++ + +IY  MN GEFP+S+ +G R++ W+ +EV+EW+ 
Sbjct  14  LKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMD  62

221) W5S_1816 in NC_017845


> NC_009457_P3|28|G27|147673587|YP_001217325.1|Vibrio_cholerae_O395|-|44321..44527|-|VC0395_A1382|transcriptional 
regulator
Length=68

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 43/57 (76%), Gaps = 1/57 (1%)

Query  6   RLIRFPE-MRKTGFGKAWLYRLINEERFPQPVKIGIRAVAFVENEIDEWIVVAIEKR  61
           R++++ E M KT+++++ +YR +N+  FPQ+V +G RA+A VE+E+DEW+   + +R
Sbjct  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR  68