Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
transcriptional regulator protein |
NC_022237 (Streptococcus intermedius C270) |
0.0 |
100 |
|
Cro/CI family transcriptional regulator |
NC_014498 (Streptococcus pneumoniae 670-6B) |
0.0 |
100 |
|
hypothetical protein |
NC_010582 (Streptococcus pneumoniae CGSP14) |
0.0 |
100 |
|
Tn5251 transcriptional regulator Cro/CI family |
NC_011072 (Streptococcus pneumoniae G54) |
0.0 |
100 |
|
DNA-binding helix-turn-helix protein |
NC_013895 (Clostridiales genomosp. UPII9-5) |
0.0 |
100 |
|
Cro/CI family transcriptional regulator |
NC_021994 (Enterococcus faecium AUS0085) |
0.0 |
100 |
|
replication initiation protein |
NC_017961 (Enterococcus faecium DO) |
0.0 |
100 |
|
transcriptional regulator |
NC_018608 (Staphylococcus aureus 08BA02176) |
0.0 |
100 |
|
Tn916-associated transcriptional regulator |
NC_014925 (Staphylococcus pseudintermedius HKU10-03) |
0.0 |
100 |
|
Tn916, transcriptional regulator |
NC_004116 (Streptococcus agalactiae 2603V/R) |
0.0 |
100 |
|
transcriptional regulator protein |
NC_022239 (Streptococcus anginosus C238) |
0.0 |
100 |
|
transcriptional regulator protein |
NC_022238 (Streptococcus constellatus C1050) |
0.0 |
100 |
|
Tn916 ORF20 phage replication initiation factor PEP |
NC_017576 (Streptococcus gallolyticus ATCC 43143) |
0.0 |
100 |
|
Cro/CI family transcriptional regulator |
NC_013798 (Streptococcus gallolyticus UCN34) |
0.0 |
100 |
|
phage replication initiation protein |
NC_021900 (Streptococcus lutetiensis 033) |
0.0 |
100 |
|
Tn916, transcriptional regulator |
NC_015291 (Streptococcus oralis Uo5) |
0.0 |
100 |
|
conjugative transposon replication initiation factor |
NC_011900 (Streptococcus pneumoniae ATCC 700669) |
0.0 |
100 |
|
Tn916, transcriptional regulator |
NC_010582 (Streptococcus pneumoniae CGSP14) |
0.0 |
100 |
|
transcriptional regulator, Cro/CI family |
NC_012467 (Streptococcus pneumoniae P1031) |
0.0 |
100 |
|
hypothetical protein |
NC_017769 (Streptococcus pneumoniae ST556) |
0.0 |
100 |
|
transcriptional regulator, Cro/CI family |
NC_012469 (Streptococcus pneumoniae Taiwan19F-14) |
0.0 |
100 |
|
Cro/CI family transcriptional regulator |
NC_015875 (Streptococcus pseudopneumoniae IS7493) |
0.0 |
100 |
|
Tn916, transcriptional regulator |
NC_009442 (Streptococcus suis 05ZYH33) |
0.0 |
100 |
|
Tn916, transcriptional regulator |
NC_009443 (Streptococcus suis 98HAH33) |
0.0 |
100 |
|
replication initiation factor |
NC_012926 (Streptococcus suis BM407) |
0.0 |
100 |
|
replication initiation factor |
NC_012926 (Streptococcus suis BM407) |
0.0 |
100 |
|
replication initiation factor |
NC_012924 (Streptococcus suis SC84) |
0.0 |
100 |
|
transcriptional regulator, Cro/CI family |
NC_017333 (Staphylococcus aureus ST398) |
0.0 |
99 |
|
Cro/CI family transcriptional regulator |
NC_010380 (Streptococcus pneumoniae Hungary19A-6) |
0.0 |
99 |
|
replication initiation protein |
NC_014251 (Streptococcus pneumoniae TCH8431/19A) |
0.0 |
99 |
|
FIG01108196: hypothetical protein |
NC_021507 (Streptococcus agalactiae ILRI112) |
0.0 |
98 |
|
Tn916, transcriptional regulator, putative |
NC_021213 (Streptococcus suis TL13) |
0.0 |
98 |
|
Cro/CI family transcriptional regulator |
NC_021175 (Streptococcus oligofermentans AS 1.3089) |
4e-179 |
99 |
|
replication initiation factor |
NC_009089 (Clostridium difficile 630) |
9e-179 |
93 |
|
transcriptional regulator |
NC_016630 (Filifactor alocis ATCC 35896) |
3e-178 |
97 |
|
FIG01108196: hypothetical protein |
NC_021485 (Streptococcus agalactiae 09mas018883) |
8e-178 |
99 |
|
Tn916 ORF20 phage replication initiation factor PEP |
NC_015600 (Streptococcus pasteurianus ATCC 43144) |
8e-178 |
99 |
|
Cro/CI family transcriptional regulator |
NC_017022 (Enterococcus faecium Aus0004) |
6e-136 |
69 |
|
hypothetical protein |
NC_009782 (Staphylococcus aureus Mu3) |
6e-136 |
69 |
|
transcriptional regulator |
NC_002758 (Staphylococcus aureus Mu50) |
6e-136 |
69 |
|
Transcriptional regulator, Tn916 |
NC_017347 (Staphylococcus aureus T0131) |
6e-136 |
69 |
|
replication initiation factor |
NC_017331 (Staphylococcus aureus TW20) |
6e-136 |
69 |
|
Cro/CI family transcriptional regulator |
NC_017568 (Staphylococcus pseudintermedius ED99) |
6e-136 |
69 |
|
transcriptional regulator, Tn916 |
NC_013853 (Streptococcus mitis B6) |
6e-136 |
69 |
|
replication initiation factor |
NC_017341 (Staphylococcus aureus JKD6008) |
9e-136 |
69 |
|
hypothetical protein |
NC_003210 (Listeria monocytogenes EGD-e) |
1e-134 |
66 |
|
replication initiation factor |
NC_021670 (Staphylococcus aureus Bmb9393) |
3e-134 |
68 |
|
replication initiation factor |
NC_009089 (Clostridium difficile 630) |
2e-131 |
63 |
|
Putative phage replication protein RstA |
NC_021040 (Roseburia intestinalis M50/1) |
5e-130 |
63 |
|
Putative phage replication protein RstA |
NC_021035 (butyrate-producing bacterium SS3/4) |
3e-127 |
81 |
|
replication initiation factor |
NC_009089 (Clostridium difficile 630) |
8e-127 |
81 |
|
helix-turn-helix protein |
NC_021994 (Enterococcus faecium AUS0085) |
5e-123 |
64 |
|
cro/CI family transcriptional regulator |
NC_017316 (Enterococcus faecalis OG1RF) |
5e-123 |
63 |
|
helix-turn-helix protein |
NC_021994 (Enterococcus faecium AUS0085) |
2e-121 |
61 |
|
replication initiation family protein |
NC_017960 (Enterococcus faecium DO) |
2e-121 |
61 |
|
Cro/CI family transcriptional regulator |
NC_004668 (Enterococcus faecalis V583) |
4e-121 |
62 |
|
helix-turn-helix domain-containing protein |
NC_017022 (Enterococcus faecium Aus0004) |
4e-121 |
62 |
|
Cro/CI family transcriptional regulator |
NC_004668 (Enterococcus faecalis V583) |
6e-120 |
61 |
|
replication initiation factor |
NC_009089 (Clostridium difficile 630) |
3e-118 |
62 |
|
conjugative transposon replication initiation factor |
NC_013315 (Clostridium difficile CD196) |
7e-112 |
63 |
|
conjugative transposon replication initiation factor |
NC_013316 (Clostridium difficile R20291) |
7e-112 |
63 |
|
Putative phage replication protein RstA |
NC_021019 (Eubacterium cylindroides T2-87) |
1e-111 |
56 |
|
helix-turn-helix protein |
NC_021994 (Enterococcus faecium AUS0085) |
6e-109 |
54 |
|
Putative phage replication protein RstA |
NC_021012 (Roseburia intestinalis XB6B4) |
6e-106 |
51 |
|
replication initiation factor family protein |
NC_017491 (Lactobacillus rhamnosus ATCC 8530) |
3e-83 |
44 |
|
Replication initiation factor |
NC_017743 (Bacillus sp. JS) |
4e-55 |
41 |
|
DNA relaxase NicK |
NC_000964 (Bacillus subtilis 168) |
6e-55 |
41 |
|
putative replication protein, mobile element region |
NC_020507 (Bacillus subtilis 6051-HGW) |
6e-55 |
41 |
|
replication protein; mobile element region |
NC_014639 (Bacillus atrophaeus 1942) |
8e-55 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_009442_P1' AND ph.id_pai_orf='28' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc