Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III secretion protein HrpB |
NC_004578 (Pseudomonas syringae DC3000) |
1e-51 |
100 |
|
type III secretion protein HrpB |
NC_007005 (Pseudomonas syringae B728a) |
9e-35 |
68 |
|
type III secretion component protein HrpB |
NC_005773 (Pseudomonas syringae 1448A) |
2e-34 |
65 |
|
YscI/HrpB family type III secretion apparatus protein |
NC_009439 (Pseudomonas mendocina ymp) |
1e-24 |
53 |
|
protein RspB |
NC_016830 (Pseudomonas fluorescens F113) |
5e-13 |
45 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004578_P1' AND ph.id_pai_orf='28' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc