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Homologs of spaS gene of NC_003197_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE451236_20530
( YP_008267093.1 )

type III secretion system protein SpaS

NC_021820
(Salmonella enterica 08-1736)

2e-133

100

2) spaS
( YP_005238996.1 )

surface presentation of antigens protein SpaS

NC_016856
(Salmonella enterica 14028S)

2e-133

100

3) spaS
( YP_002227631.1 )

surface presentation of antigens protein SpaS

NC_011274
(Salmonella enterica 287/91)

2e-133

100

4) SEEH1578_23245
( YP_008248695.1 )

type III secretion system protein SpaS

NC_021810
(Salmonella enterica 41578)

2e-133

100

5) spaS
( YP_005398250.1 )

type III secretion system secretory apparatus

NC_017046
(Salmonella enterica 798)

2e-133

100

6) SU5_03368
( YP_006088975.1 )

Type III secretion inner membrane protein

NC_017623
(Salmonella enterica B182)

2e-133

100

7) spaS
( YP_008482450.1 )

secretory protein

NC_022221
(Salmonella enterica CDC1983-67)

2e-133

100

8) SEEB0189_05735
( YP_008307498.1 )

type III secretion system protein SpaS

NC_021844
(Salmonella enterica CFSAN000189)

2e-133

100

9) CFSAN001921_02640
( YP_008253936.1 )

type III secretion system protein SpaS

NC_021814
(Salmonella enterica CFSAN001921)

2e-133

100

10) CFSAN001992_19090
( YP_007473534.1 )

type III secretion system protein SpaS

NC_020307
(Salmonella enterica CFSAN001992)

2e-133

100

11) CFSAN002050_20735
( YP_008262018.1 )

type III secretion system protein SpaS

NC_021818
(Salmonella enterica CFSAN002050)

2e-133

100

12) CFSAN002069_17835
( YP_008252327.1 )

type III secretion system protein SpaS

NC_021812
(Salmonella enterica CFSAN002069)

2e-133

100

13) SeD_A3197
( YP_002216856.1 )

surface presentation of antigens protein SpaS

NC_011205
(Salmonella enterica CT_02021853)

2e-133

100

14) SeSA_A3040
( YP_002115839.1 )

surface presentation of antigens protein SpaS

NC_011094
(Salmonella enterica CVM19633)

2e-133

100

15) STMMW_28491
( YP_005233876.1 )

secretory protein (associated with virulence)

NC_016854
(Salmonella enterica D23580)

2e-133

100

16) spaS
( NP_461808.1 )

surface presentation of antigens protein SpaS

NC_003197
(Salmonella enterica LT2)

2e-133

100

17) spaS
( YP_002244800.1 )

surface presentation of antigens protein SpaS

NC_011294
(Salmonella enterica P125109)

2e-133

100

18) spaS
( YP_005213995.1 )

secretory protein (associated with virulence)

NC_016831
(Salmonella enterica RKS5078)

2e-133

100

19) I137_13745
( YP_008382150.1 )

type III secretion system protein SpaS

NC_021984
(Salmonella enterica S06004)

2e-133

100

20) SPAB_03590
( YP_001589764.1 )

surface presentation of antigens protein SpaS

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-133

100

21) spaS
( YP_005182755.1 )

type III secretion system secretory apparatus

NC_016810
(Salmonella enterica SL1344)

2e-133

100

22) SNSL254_A3092
( YP_002042128.1 )

surface presentation of antigens protein SpaS

NC_011080
(Salmonella enterica SL254)

2e-133

100

23) SeHA_C3077
( YP_002046847.1 )

surface presentation of antigens protein SpaS

NC_011083
(Salmonella enterica SL476)

2e-133

100

24) spaS
( YP_005243868.1 )

surface presentation of antigens protein SpaS

NC_016857
(Salmonella enterica ST4/74)

2e-133

100

25) STMDT12_C29360
( YP_005248632.1 )

surface presentation of antigens protein SpaS

NC_016860
(Salmonella enterica T000240)

2e-133

100

26) STU288_14590
( YP_007904009.1 )

type III secretion system protein SpaS

NC_021151
(Salmonella enterica U288)

2e-133

100

27) spaS
( YP_005253376.1 )

surface presentation of antigens protein SpaS

NC_016863
(Salmonella enterica UK-1)

2e-133

100

28) SN31241_39790
( YP_008361894.1 )

Surface presentation of antigens protein spaS

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-133

100

29) SBOV29131
( YP_008506735.1 )

type III secretion protein

NC_022241
(Salmonella enterica 3114)

5e-133

30) SSPA2559
( YP_002143404.1 )

surface presentation of antigens protein SpaS

NC_011147
(Salmonella enterica AKU12601)

6e-133

31) spaS
( YP_151914.1 )

secretory protein (associated with virulence)

NC_006511
(Salmonella enterica ATCC 9150)

6e-133

32) spaS
( NP_457281.1 )

secretory protein (associated with virulence)

NC_003198
(Salmonella enterica CT18)

6e-133

33) STBHUCCB_29330
( YP_005218433.1 )

Surface presentation of antigens protein spaS

NC_016832
(Salmonella enterica P-stx-12)

6e-133

34) spaS
( YP_002638463.1 )

surface presentation of antigens protein SpaS

NC_012125
(Salmonella enterica RKS4594)

6e-133

35) SeAg_B3009
( YP_002147784.1 )

surface presentation of antigens protein SpaS

NC_011149
(Salmonella enterica SL483)

6e-133

36) spaS
( NP_806490.1 )

surface presentation of antigens protein SpaS

NC_004631
(Salmonella enterica Ty2)

6e-133

37) TY21A_14090
( YP_007927060.1 )

surface presentation of antigens protein SpaS

NC_021176
(Salmonella enterica Ty21a)

6e-133

38) spaS
( YP_217806.1 )

surface presentation of antigens protein SpaS

NC_006905
(Salmonella enterica SC-B67)

4e-132

39) SARI_00086
( YP_001569181.1 )

surface presentation of antigens protein SpaS

NC_010067
(Salmonella enterica RSK2980)

3e-130

40) A464_2911
( YP_008323505.1 )

Type III secretion inner membrane protein; Surface presentation of antigens protein SpaS

NC_021870
(Salmonella bongori N268-08)

7e-129

41) spaS
( YP_004731327.1 )

virulence associated secretory protein

NC_015761
(Salmonella bongori NCTC 12419)

7e-129

42) spaS
( NP_902291.1 )

surface presentation of antigens protein SpaS

NC_005085
(Chromobacterium violaceum ATCC 12472)

7e-104

43) spaS
( YP_002924281.1 )

surface presentation of antigens protein SpaS

NC_012751
(Candidatus Hamiltonella defensa T5A)

4e-85

44) spaS
( YP_007030622.1 )

surface presentation of antigens protein

NC_019670
(Pseudomonas sp. UW4)

2e-82

45) ECH74115_4137
( YP_002272329.1 )

surface presentation of antigens protein SpaS

NC_011353
(Escherichia coli EC4115)

5e-81

46) Z4185
( NP_289418.1 )

surface presentation of antigens protein SpaS

NC_002655
(Escherichia coli EDL933)

5e-81

47) ECs3721
( NP_311748.1 )

surface presentation of antigens protein SpaS

NC_002695
(Escherichia coli Sakai)

5e-81

48) epaS
( YP_003079641.1 )

surface presentation of antigens protein SpaS

NC_013008
(Escherichia coli TW14359)

5e-81

49) CDCO157_3476
( YP_006314343.1 )

surface presentation of antigens protein SpaS

NC_017906
(Escherichia coli Xuzhou21)

5e-81

50) spaS
( YP_005207208.1 )

protein SpaS

NC_016830
(Pseudomonas fluorescens F113)

6e-81

51) SG2081
( YP_455761.1 )

surface presentation of antigens protein SpaS

NC_007712
(Sodalis glossinidius morsitans)

2e-78

52) epaS1
( YP_006097356.1 )

type III secretion system protein

NC_017626
(Escherichia coli 042)

2e-76

53) spaS
( YP_002413878.1 )

surface presentation of antigens protein SpaS

NC_011751
(Escherichia coli UMN026)

4e-76

54) flhB
( YP_001883219.1 )

surface presentation of antigens protein SpaS

NC_010660
(Shigella boydii CDC 3083-94)

1e-68

55) spa40
( YP_406194.1 )

surface presentation of antigens protein SpaS

NC_007607
(Shigella dysenteriae Sd197)

1e-68

56) spa40
( YP_313372.1 )

surface presentation of antigens protein SpaS

NC_007385
(Shigella sonnei Ss046)

1e-68

57) spa40
( YP_005712048.1 )

surface presentation of antigens protein SpaS

NC_017319
(Shigella flexneri 2002017)

2e-68

58) spa40
( NP_858289.1 )

surface presentation of antigens protein SpaS

NC_004851
(Shigella flexneri 301)

2e-68

59) spaS2
( YP_001908604.1 )

surface presentation of antigens protein SpaS

NC_010694
(Erwinia tasmaniensis Et1/99)

3e-63

60) SG0572
( YP_454252.1 )

surface presentation of antigens protein SpaS

NC_007712
(Sodalis glossinidius morsitans)

8e-62

61) EAM_2656
( YP_003539723.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

1e-49

62) spaS1
( YP_003530146.1 )

surface presentation of antigens protein SpaS

NC_013961
(Erwinia amylovora CFBP1430)

1e-49

63) spaS3
( YP_003530947.1 )

surface presentation of antigens protein SpaS

NC_013961
(Erwinia amylovora CFBP1430)

2e-44

64) S70_09780
( YP_006216507.1 )

type III secretion system protein SpaS

NC_017731
(Providencia stuartii MRSN 2154)

9e-37

• Sequence Alignments

1) SE451236_20530 in NC_021820


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

2) SEEB0189_05735 in NC_021844


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

3) CFSAN002050_20735 in NC_021818


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

4) SeD_A3197 in NC_011205


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

5) spaS in NC_011294


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

6) spaS in NC_011274


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

7) spaS in NC_022221


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

8) spaS in NC_016831


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

9) SEEH1578_23245 in NC_021810


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

10) SU5_03368 in NC_017623


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

11) CFSAN002069_17835 in NC_021812


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

12) SeHA_C3077 in NC_011083


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

13) CFSAN001992_19090 in NC_020307


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

14) SNSL254_A3092 in NC_011080


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

15) SN31241_39790 in NC_021902


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

16) SPAB_03590 in NC_010102


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

17) I137_13745 in NC_021984


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

18) SeSA_A3040 in NC_011094


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

19) spaS in NC_016856


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

20) spaS in NC_017046


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

21) STMMW_28491 in NC_016854


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

22) spaS in NC_003197


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

23) spaS in NC_016810


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

24) spaS in NC_016857


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

25) STMDT12_C29360 in NC_016860


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

26) STU288_14590 in NC_021151


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

27) spaS in NC_016863


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

28) CFSAN001921_02640 in NC_021814


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

29) SBOV29131 in NC_022241


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1760),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 355/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIV+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

30) SeAg_B3009 in NC_011149


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 354/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

31) SSPA2559 in NC_011147


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 354/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

32) spaS in NC_006511


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 354/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

33) spaS in NC_012125


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 353/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldavaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDA+AEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

34) spaS in NC_003198


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 354/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

35) STBHUCCB_29330 in NC_016832


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 354/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

36) TY21A_14090 in NC_021176


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 354/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

37) spaS in NC_004631


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  467 bits (1759),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 354/356 (99%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

38) spaS in NC_006905


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  464 bits (1748),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 352/356 (99%), Positives = 355/356 (99%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVVDIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN+V+IAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldavaEYFRTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDA+AEYF TMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

39) SARI_00086 in NC_010067


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  458 bits (1725),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 345/356 (97%), Positives = 355/356 (99%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   ENFEQSMADYSLAVLGVGLKYLIPFMLLCLVCSALPTLLQTGFVLATEALKLNLSALNPV  120
            +NF+QSMADYSLAV+G+GLKYLIPFMLLCLVCSALP+LLQ+GFVLATEALK NLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNVMGIAVIWRElll  180
            EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGN++GIAVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclacalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREVHMEI  240
            ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPFPMISVYETNQRALAVRSYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMP+PMISVYETNQRALAVR+YAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARSLFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

40) spaS in NC_015761


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  453 bits (1707),  Expect = 7e-129, Method: Compositional matrix adjust.
 Identities = 342/356 (97%), Positives = 353/356 (99%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTVGGIAYLVSYGSFNEFMGIVKLIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLT+GGIAYLVSYGSFNEFMGI+K+IIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFNQSMADYSLAVFWLGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNF+QSMADYSLAVF +GLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKIFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKIEIFSQLNGNVAGMAVIWRElll  180
            EGAKK+FSMRTVKDTVKTLLYLSSFVVAAIICWKKYK+EIFSQLNGN+ G+AVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclvcalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREIHMEI  240
            ALVLTCL CALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRRE+HMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARALFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLAR+LFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

41) A464_2911 in NC_021870


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  453 bits (1707),  Expect = 7e-129, Method: Compositional matrix adjust.
 Identities = 342/356 (97%), Positives = 353/356 (99%), Gaps = 0/356 (0%)

Query  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTVGGIAYLVSYGSFNEFMGIVKLIIA  60
            MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLT+GGIAYLVSYGSFNEFMGI+K+IIA
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   DNFNQSMADYSLAVFWLGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120
            DNF+QSMADYSLAVF +GLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  EGAKKIFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKIEIFSQLNGNVAGMAVIWRElll  180
            EGAKK+FSMRTVKDTVKTLLYLSSFVVAAIICWKKYK+EIFSQLNGN+ G+AVIWRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  alvltclvcalivllldaiaEYFLTmkdmkmdkeevkremkeQEGNPEVKSKRREIHMEI  240
            ALVLTCL CALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRRE+HMEI
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300
            LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VIVDIKLARALFKTHRRYDLVSLEEIDevlrllvwleeveNAGKDVIQPQENEVRH  356
            VIVDIKLAR+LFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH  356

42) spaS in NC_005085


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  370 bits (1391),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 240/352 (69%), Positives = 308/352 (88%), Gaps = 0/352 (0%)

Query  1    MSSNKTEKPTRKKLQDAAKKGQSFKSRDLVVACLTLCGVAYLVSFGSLVELMGIFRQALA  60
            MSSNKTEKPT+K+L+D+AKKGQSFKS+DL++ACLTL G+AYLVS+GS+ E+MGI++  +A
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   GGFQLDMRGYAQAVFWQGLKLLLPIFLLCVAASALPVLLQTGFVLASEALKLNLEALNPI  120
            + F+  M +Y+ AVF  GLK L+P+ LLC+  SALP LLQ+GFVLA+EALK NL ALNP+
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  NGFKKLFSLRTVKEAVKALLYLASFVVAVALIWRKHKALLFAQLNGSVMDIAAVWRElll  180
            +G KKLFS+RTVK++VK+LLYL+SFVVA  + W+K K  +F+QLNG++++IA +WRELLL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLL  180

Query  181  slvltclGCIVLILILDALAEYFLFMKDMKMDKQEVKREMKEQEGNPEIKSRRREAHFEL  240
            +LVLTCL+C +++L+LDA+AEYFL MKDMKMDK+EVKREMKEQEGNPE+KS+RRE H E+
Sbjct  181  ALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI  240

Query  241  LSEQVKSDVENSRLIIANPTHIAIGIYFRPELVPIPFVSVMETNQRALAVRAYAEKVGVP  300
            LSEQVKSD+ENSRLI+ANPTHI+IGIYF+PEL+PIP +SV ETNQRALAVRAYAEKVGVP
Sbjct  241  LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVP  300

Query  301  VVRDVPLARRILASHRRYSFINleevdevlrllewleQVENAGRPDDEPSGG  352
            V+ D+ LAR ++ +HRRY +++LEE+DEVLRLL WLE+VENAG+   +P   
Sbjct  301  VIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQEN  352

43) spaS in NC_012751


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  308 bits (1154),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 203/344 (60%), Positives = 291/344 (85%), Gaps = 1/344 (0%)

Query  1    MSSNKTEKPTQKKLKDSAKKGQSFKTKDFIIACLMLAGVQYLISFASFSELMFLYKEIIS  60
            MSSNKTEKPT+K+L DSAKKGQSFK+KD+IIACL L+G+ YL+S++SF+E+M + K II+
Sbjct  1    MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIA  60

Query  61   FNFEYDIHRYTISVLSIGFKiflpilllcifcSALPSLLQTGFLLATKAIKLNLGALNPT  120
             NF+  +  Y+++V++IG+K ++P++LLC+ CSALP+LLQ+GF+LAT A+K NL+ALNP 
Sbjct  61   DNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPV  120

Query  121  KGFKKIFSLRTAKDAVKSVLYLGTFFVAVLVVWNTKRGVLFQQLHGSSPYEITMVWGQLL  180
             G KK+FS+RT KD+VK++LYL++F VA ++ W+  +  +F QL+G+    I+++W +LL
Sbjct  121  EGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIV-GIAVIWRELL  179

Query  181  QSILWTCLGCIVIILILDALAEYFLHIKDLKMDKQEVKREMKEQDGNPEIKGRRRELHME  240
             +++ TCL+C +I+L+LDA+AEYFL +KD+KMDK+EVKREMKEQ+GNPE+K++RRE+HME
Sbjct  180  LALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHME  239

Query  241  ILSEQIKSDIKNSQCIIANPTHIAVGIYVNPDTVMMPFISVLETNQKALAVRAYAKKVGV  300
            ILSEQ+KSDI NS+ I+ANPTHI++GIY +P+ + +P ISV ETNQ+ALAVRAYA KVGV
Sbjct  240  ILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGV  299

Query  301  PVIQNISLARAIYKNNNRYSFVRMdeldellkllFWLYDVESEG  344
            PVI +I LAR+++K + RY +V ++E+DE+L+LL WL +VE+ G
Sbjct  300  PVIVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAG  343

44) spaS in NC_019670


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  299 bits (1120),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 203/341 (60%), Positives = 281/341 (83%), Gaps = 0/341 (0%)

Query  4    SASKTEKPTAKRLRDASRKGQTFKAKDLVITCLTLCGITYMVFNSSLVEVMEVYRRIIAS  63
            S++KTEKPT KRL D+++KGQ+FK+KDL+I+CLTL GI+Y+V  +S+ E M + + IIA 
Sbjct  2    SSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIAD  61

Query  64   DFDVDLQEYSAMlvlvglkallplllvcvlTSALPALLQSGFALASEALKLNLGALNPIN  123
            +FD  + +YS  +  +GLK L+P++L+C++ SALPALLQ+GF LA+EALK NL+ALNP++
Sbjct  62   NFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  124  GFKKLFSMRTVKDTVKALLYLGSFALALWIVWITqrqllfaqlfaqasdlfaIWGHlllv  183
            G KKLFSMRTVKDTVK+LLYL+SF +A  I W   +  +F+QL ++  ++  IW +LLL 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  184  lvlaflgcvllIVVLDALSEYWLFMKDQMMDKDSVKREHKEQDGNPEIKGRRRDLHRELL  243
            LVL+ L+C L++++LDA++EY L MKD  MDK+ VKRE KEQ+GNPE+K++RR++H E+L
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  244  SEQIKSDVRNSRMIIANPTHIAIGVYFRPEITVLPFISLMETNQRALAVRAYAKEVGVPV  303
            SEQ+KSD+ NSR+I+ANPTHI+IG+YF+PE+  +P IS+ ETNQRALAVRAYA  VGVPV
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  304  INDIALARRIFKTHQRYSFLQVQEIEEVLRLLIWLEQVEQA  344
            I DI LAR +FKTH+RY ++ ++EI+EVLRLL+WLE+VE+A
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENA  342

45) ECH74115_4137 in NC_011353


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  294 bits (1103),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 189/349 (55%), Positives = 269/349 (78%), Gaps = 2/349 (0%)

Query  2    ANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHN  61
            +NKTEKPT+K+L+D++KKGQ +KS+DL ++ + L G  YL      +++M+I+  I+ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AKPDIWDY-FKAMGIGWLKTIIPFLLVCMFTTILVSWFQSKMQLATEAVKLKFDSLNPVN  120
                + DY +   GIG LK +IPF+L+C+  + L + +Q+   LATEA+K ++ +LNPV+
Sbjct  63   FDQSMADYSLAVFGIG-LKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFGLKTVKEFVKAILYIIFFALEIKVFWSNHKSLLFKTLDGDIISLLSDWGEMLFL  180
            G K++F+++TVK+ VK++LY+  F +   + W + K  +F  L+G+I+++   W E+L+ 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERHQEIL  240
            L+L CL+  +IVL++D IAEYFL MKDMKMDK+EVKRE KEQEGNPE+KSKRRE H EIL
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPI  300
            SEQ+KSD+ NSRL++ANPTHI+IGIYFKP+L PIP+ISV ETN+ ALAVR YA  +G+P+
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  ITDKKLARKIYATHRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQ  349
            I D KLAR ++ THRRYD VS+E+IDE+LRLL+WLE+VENAG+ V + Q
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

46) Z4185 in NC_002655


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  294 bits (1103),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 189/349 (55%), Positives = 269/349 (78%), Gaps = 2/349 (0%)

Query  2    ANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHN  61
            +NKTEKPT+K+L+D++KKGQ +KS+DL ++ + L G  YL      +++M+I+  I+ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AKPDIWDY-FKAMGIGWLKTIIPFLLVCMFTTILVSWFQSKMQLATEAVKLKFDSLNPVN  120
                + DY +   GIG LK +IPF+L+C+  + L + +Q+   LATEA+K ++ +LNPV+
Sbjct  63   FDQSMADYSLAVFGIG-LKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFGLKTVKEFVKAILYIIFFALEIKVFWSNHKSLLFKTLDGDIISLLSDWGEMLFL  180
            G K++F+++TVK+ VK++LY+  F +   + W + K  +F  L+G+I+++   W E+L+ 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERHQEIL  240
            L+L CL+  +IVL++D IAEYFL MKDMKMDK+EVKRE KEQEGNPE+KSKRRE H EIL
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPI  300
            SEQ+KSD+ NSRL++ANPTHI+IGIYFKP+L PIP+ISV ETN+ ALAVR YA  +G+P+
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  ITDKKLARKIYATHRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQ  349
            I D KLAR ++ THRRYD VS+E+IDE+LRLL+WLE+VENAG+ V + Q
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

47) ECs3721 in NC_002695


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  294 bits (1103),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 189/349 (55%), Positives = 269/349 (78%), Gaps = 2/349 (0%)

Query  2    ANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHN  61
            +NKTEKPT+K+L+D++KKGQ +KS+DL ++ + L G  YL      +++M+I+  I+ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AKPDIWDY-FKAMGIGWLKTIIPFLLVCMFTTILVSWFQSKMQLATEAVKLKFDSLNPVN  120
                + DY +   GIG LK +IPF+L+C+  + L + +Q+   LATEA+K ++ +LNPV+
Sbjct  63   FDQSMADYSLAVFGIG-LKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFGLKTVKEFVKAILYIIFFALEIKVFWSNHKSLLFKTLDGDIISLLSDWGEMLFL  180
            G K++F+++TVK+ VK++LY+  F +   + W + K  +F  L+G+I+++   W E+L+ 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERHQEIL  240
            L+L CL+  +IVL++D IAEYFL MKDMKMDK+EVKRE KEQEGNPE+KSKRRE H EIL
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPI  300
            SEQ+KSD+ NSRL++ANPTHI+IGIYFKP+L PIP+ISV ETN+ ALAVR YA  +G+P+
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  ITDKKLARKIYATHRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQ  349
            I D KLAR ++ THRRYD VS+E+IDE+LRLL+WLE+VENAG+ V + Q
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

48) epaS in NC_013008


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  294 bits (1103),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 189/349 (55%), Positives = 269/349 (78%), Gaps = 2/349 (0%)

Query  2    ANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHN  61
            +NKTEKPT+K+L+D++KKGQ +KS+DL ++ + L G  YL      +++M+I+  I+ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AKPDIWDY-FKAMGIGWLKTIIPFLLVCMFTTILVSWFQSKMQLATEAVKLKFDSLNPVN  120
                + DY +   GIG LK +IPF+L+C+  + L + +Q+   LATEA+K ++ +LNPV+
Sbjct  63   FDQSMADYSLAVFGIG-LKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFGLKTVKEFVKAILYIIFFALEIKVFWSNHKSLLFKTLDGDIISLLSDWGEMLFL  180
            G K++F+++TVK+ VK++LY+  F +   + W + K  +F  L+G+I+++   W E+L+ 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERHQEIL  240
            L+L CL+  +IVL++D IAEYFL MKDMKMDK+EVKRE KEQEGNPE+KSKRRE H EIL
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPI  300
            SEQ+KSD+ NSRL++ANPTHI+IGIYFKP+L PIP+ISV ETN+ ALAVR YA  +G+P+
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  ITDKKLARKIYATHRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQ  349
            I D KLAR ++ THRRYD VS+E+IDE+LRLL+WLE+VENAG+ V + Q
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

49) CDCO157_3476 in NC_017906


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  294 bits (1103),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 189/349 (55%), Positives = 269/349 (78%), Gaps = 2/349 (0%)

Query  2    ANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHN  61
            +NKTEKPT+K+L+D++KKGQ +KS+DL ++ + L G  YL      +++M+I+  I+ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AKPDIWDY-FKAMGIGWLKTIIPFLLVCMFTTILVSWFQSKMQLATEAVKLKFDSLNPVN  120
                + DY +   GIG LK +IPF+L+C+  + L + +Q+   LATEA+K ++ +LNPV+
Sbjct  63   FDQSMADYSLAVFGIG-LKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFGLKTVKEFVKAILYIIFFALEIKVFWSNHKSLLFKTLDGDIISLLSDWGEMLFL  180
            G K++F+++TVK+ VK++LY+  F +   + W + K  +F  L+G+I+++   W E+L+ 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERHQEIL  240
            L+L CL+  +IVL++D IAEYFL MKDMKMDK+EVKRE KEQEGNPE+KSKRRE H EIL
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPI  300
            SEQ+KSD+ NSRL++ANPTHI+IGIYFKP+L PIP+ISV ETN+ ALAVR YA  +G+P+
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  ITDKKLARKIYATHRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQ  349
            I D KLAR ++ THRRYD VS+E+IDE+LRLL+WLE+VENAG+ V + Q
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

50) spaS in NC_016830


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  294 bits (1101),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 201/341 (59%), Positives = 282/341 (83%), Gaps = 0/341 (0%)

Query  4    SASKTEKPTAKRLRDAARKGQTFKAKDLVITCLTLCGITYMVFNSSLSEIMEVYRRIIAS  63
            S++KTEKPT KRL D+A+KGQ+FK+KDL+I+CLTL GI+Y+V  +S++E+M + + IIA 
Sbjct  2    SSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIAD  61

Query  64   DFDAELQAYSAMlvllglkvllplllvcvlTSALPTLLQSGFALASEALKLNLGALNPVN  123
            +FD  +  YS  +  +GLK L+P++L+C++ SALP+LLQ+GF LA+EALK NL+ALNPV+
Sbjct  62   NFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  124  GFKKLFSLRTVKDTFKALLYLGSFAMALWIVWVTQRqllfaqlfaqapalfaIWGHlllv  183
            G KKLFS+RTVKDT K+LLYL+SF +A  I W   +  +F+QL ++  ++  IW +LLL 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  184  lvlaflacvllivvlDALSEYWLFMKDQMMDKDSVKREHKEQDGNPQIKGRRRDLHMELL  243
            LVL+ LAC L++++LDA++EY L MKD  MDK+ VKRE KEQ+GNP++K++RR++HME+L
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  244  SEQVKSDVRSSRMIIANPTHIAIGVYFRPEITLLPFISLMETNQRALAVRAYAKEVGVPV  303
            SEQVKSD+ +SR+I+ANPTHI+IG+YF+PE+  +P IS+ ETNQRALAVRAYA  VGVPV
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  304  INDVALARRIFKTHQRYSFLQVQEVEEVLRLLIWLEQVEQA  344
            I D+ LAR +FKTH+RY ++ ++E++EVLRLL+WLE+VE+A
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENA  342

51) SG2081 in NC_007712


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  285 bits (1068),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 189/342 (56%), Positives = 271/342 (80%), Gaps = 0/342 (0%)

Query  2    SNKTEKPTPKRLRDAAKKGQAFKSRDVIIACMMLCGVCWLTSFTSLESLMDLYRQMVVGN  61
            SNKTEKPT KRL D+AKKGQ+FKS+D+IIAC+ L G+  L S+ S++ +M++ + ++ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   FSLSLTAYRNALMFTALQILLPIIAMGIVASALPLLLQTGFMLATRAFKLNFQALNPTRG  121
            F  S++ Y  A+   +L+ L+P++ + +V SALP LLQ+GF+LAT A+K N+ ALNP  G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  IKKIFSLRTAKDCVKallylaafaialMIVWRTHRQLLFEQLFANPQDIVAIWRQllmsl  181
             KK+FS+RT KD VK+LLYL++F +A +I W+  +  +F QL +N  +I  IWR+LL++L
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLAL  182

Query  182  vltcllcivcivildivAEYFLHLRSLKMDKQEVRREMKEQEGDPEIKHRRREAHMEILS  241
            VLTCL C + +++LD +AEYFL ++ +KMDK+EV+REMKEQEG+PE+K +RRE HMEILS
Sbjct  183  VLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILS  242

Query  242  EQTQADIKGSQLIIANPTHLAVGIYHNPDLTPLPFISVLERNQRALAVRDYAKKVGVSVI  301
            EQ ++DI  S+LI+ANPTH+++GIY +P+L P+P ISV E NQRALAVR YA KVGV+VI
Sbjct  243  EQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVI  302

Query  302  EDVQLARRIYYTHHLYSFVKINELDQVLRLLSWLQDVENAGR  343
             D++LAR ++ TH+ Y +V ++E+D+VLRLL WL++VENAG+
Sbjct  303  VDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGK  344

52) epaS1 in NC_017626


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  279 bits (1045),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 188/345 (55%), Positives = 268/345 (78%), Gaps = 2/345 (0%)

Query  2    ANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHN  61
            +NKTEKPT+K+L+D++KKGQ +KS+DL ++ + L G  YL      +++M+I+  I+ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AKPDIWDY-FKAMGIGWLKTIIPFLLVCMFTTILVSWFQSKMQLATEAIKFKFDSLNPVN  120
                + DY +   GIG LK +IPF+L+C+  + L + +Q+   LATEA+K ++ +LNPV+
Sbjct  63   FDQSMADYSLAVFGIG-LKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFGLKTVKEFVKailyiiffalaiKVFWSNHKSLLFKTLDGDIISLLSDWGEMLFL  180
            G K++F+++TVK+ VK++LY+  F +A  + W + K  +F  L+G+I+++   W E+L+ 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERHQEIL  240
            L+L CL+  +IVL++D IAEYFL MKDMKMDK+EVKRE KEQEGNPE+KSKRRE H EIL
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPMPLISVRETNEVALAVRKYAKEIGIPI  300
            SEQ+KSD+ NSRL++ANPTHI+IGIYFKP+L P+P+ISV ETN+ ALAVR YA  +G+P+
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  ITDKKLARKIYTTHRRYDYVSFENIDEILRLLLWLEDVENAGQPV  345
            I D KLAR ++ THRRYD VS+E+IDE+LRLL+WLE+VENAG+ V
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDV  346

53) spaS in NC_011751


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  278 bits (1041),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 189/349 (55%), Positives = 270/349 (78%), Gaps = 2/349 (0%)

Query  2    ANKTEKPTQKKLQDASKKGQILKSRDLTVSVIMLVGTLYLGYVFDVHHIMSILEYILDHN  61
            +NKTEKPT+K+L+D++KKGQ +KS+DL ++ + L G  YL      +++M+I+  I+ +N
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AKPDIWDY-FKAMGIGWLKTIIPFLLVCMFTTILVSWFQSKMQLATEAIKFKFDSLNPVN  120
                + DY +   GIG LK +IPF+L+C+  + L + +Q+   LATEA+K ++ +LNPV+
Sbjct  63   FDQSMADYSLAVFGIG-LKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFGLKTVKEFVkailyiiffalaiklfWSNHKSLLFKTLDGDIISLLSDWGEMLFL  180
            G K++F+++TVK+ VK++LY+  F +A  + W + K  +F  L+G+I+++   W E+L+ 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGSPEIKSKRRERHQEIL  240
            L+L CL+  +IVL++D IAEYFL MKDMKMDK+EVKRE KEQEG+PE+KSKRRE H EIL
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SEQLKSDVSNSRLMIANPTHIAIGIYFKPHLSPIPLISVRETNEVALAVRKYAKEIGIPI  300
            SEQ+KSD+ NSRL++ANPTHI+IGIYFKP+L PIP+ISV ETN+ ALAVR YA  +G+P+
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  ITDKKLARKIYATHRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQ  349
            I D KLAR ++ THRRYD VS+E+IDE+LRLL+WLE+VENAG+ V + Q
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

54) flhB in NC_010660


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 167/340 (50%), Positives = 257/340 (76%), Gaps = 0/340 (0%)

Query  2    ANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDVMLLYRYVIIND  61
            +NKTEKPT K+L D+AKKGQSFK KDL    + L G   ++S+ S+++ M + + +I ++
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   FEINEGKYffavvivffkiigfPLFFCVLSAVLPTLVQTKFVLATKAIKIDFSVLNPVKG  121
            F+ + + Y +AV  + +K +   +++C++ + LP+L+Q+ FVLAT A+K ++S LNPV G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  LKKIFSIKTIKEFFKSillliilalTTYFFWINDRKIIFSQVFSSVDGLYLIWGGLFKDI  181
             KK+FS++T+K+  K++L L  + +++ + W + +  IFSQ+ +++ G+ +IW  L+  +
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLAL  182

Query  182  ILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILS  241
            +L  LA +++V++LD + E++L MKDM MDK+E+KRE  EQEG+ E KS+RRE+H+EILS
Sbjct  183  VLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILS  242

Query  242  EQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPTV  301
            EQ KSDI NS+L+V NPTHI+IGIYF+PE+ P P IS+ ETNQ ALAVR YA+ VG+P +
Sbjct  243  EQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVI  302

Query  302  RDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENT  341
             D+KLAR L+KTH +Y +V +E++DEVLRL+VWLE+VEN+
Sbjct  303  VDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENA  342

55) spa40 in NC_007607


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 167/340 (50%), Positives = 257/340 (76%), Gaps = 0/340 (0%)

Query  2    ANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDVMLLYRYVIIND  61
            +NKTEKPT K+L D+AKKGQSFK KDL    + L G   ++S+ S+++ M + + +I ++
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   FEINEGKYffavvivffkiigfPLFFCVLSAVLPTLVQTKFVLATKAIKIDFSVLNPVKG  121
            F+ + + Y +AV  + +K +   +++C++ + LP+L+Q+ FVLAT A+K ++S LNPV G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  LKKIFSIKTIKEFFKSillliilalTTYFFWINDRKIIFSQVFSSVDGLYLIWGGLFKDI  181
             KK+FS++T+K+  K++L L  + +++ + W + +  IFSQ+ +++ G+ +IW  L+  +
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLAL  182

Query  182  ILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILS  241
            +L  LA +++V++LD + E++L MKDM MDK+E+KRE  EQEG+ E KS+RRE+H+EILS
Sbjct  183  VLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILS  242

Query  242  EQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPTV  301
            EQ KSDI NS+L+V NPTHI+IGIYF+PE+ P P IS+ ETNQ ALAVR YA+ VG+P +
Sbjct  243  EQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVI  302

Query  302  RDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENT  341
             D+KLAR L+KTH +Y +V +E++DEVLRL+VWLE+VEN+
Sbjct  303  VDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENA  342

56) spa40 in NC_007385


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 167/340 (50%), Positives = 257/340 (76%), Gaps = 0/340 (0%)

Query  2    ANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDVMLLYRYVIIND  61
            +NKTEKPT K+L D+AKKGQSFK KDL    + L G   ++S+ S+++ M + + +I ++
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   FEINEGKYffavvivffkiigfPLFFCVLSAVLPTLVQTKFVLATKAIKIDFSVLNPVKG  121
            F+ + + Y +AV  + +K +   +++C++ + LP+L+Q+ FVLAT A+K ++S LNPV G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  LKKIFSIKTIKEFFKSillliilalTTYFFWINDRKIIFSQVFSSVDGLYLIWGGLFKDI  181
             KK+FS++T+K+  K++L L  + +++ + W + +  IFSQ+ +++ G+ +IW  L+  +
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLAL  182

Query  182  ILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILS  241
            +L  LA +++V++LD + E++L MKDM MDK+E+KRE  EQEG+ E KS+RRE+H+EILS
Sbjct  183  VLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILS  242

Query  242  EQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPTV  301
            EQ KSDI NS+L+V NPTHI+IGIYF+PE+ P P IS+ ETNQ ALAVR YA+ VG+P +
Sbjct  243  EQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVI  302

Query  302  RDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENT  341
             D+KLAR L+KTH +Y +V +E++DEVLRL+VWLE+VEN+
Sbjct  303  VDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENA  342

57) spa40 in NC_017319


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  252 bits (941),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 167/340 (50%), Positives = 257/340 (76%), Gaps = 0/340 (0%)

Query  2    ANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDVMLLYRYVIIND  61
            +NKTEKPT K+L D+AKKGQSFK KDL    + L G   ++S+ S+++ M + + +I ++
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   FEINEGKYffavvivffkiigfPLFFCVLSAVLPTLVQTKFVLATKAIKIDFSVLNPVKG  121
            F+ + + Y +AV  + +K +   +++C++ + LP+L+Q+ FVLAT A+K ++S LNPV G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  LKKIFSIKTIKEFFKSillliilalTTYFFWINDRKIIFSQVFSSVDGLYLIWGRLFKDI  181
             KK+FS++T+K+  K++L L  + +++ + W + +  IFSQ+ +++ G+ +IW  L+  +
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLAL  182

Query  182  ILFFLAFSILVIILDFVIEFILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILS  241
            +L  LA +++V++LD + E++L MKDM MDK+E+KRE  EQEG+ E KS+RRE+H+EILS
Sbjct  183  VLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILS  242

Query  242  EQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPTV  301
            EQ KSDI NS+L+V NPTHI+IGIYF+PE+ P P IS+ ETNQ ALAVR YA+ VG+P +
Sbjct  243  EQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVI  302

Query  302  RDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENT  341
             D+KLAR L+KTH +Y +V +E++DEVLRL+VWLE+VEN+
Sbjct  303  VDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENA  342

58) spa40 in NC_004851


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  252 bits (941),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 167/340 (50%), Positives = 257/340 (76%), Gaps = 0/340 (0%)

Query  2    ANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDVMLLYRYVIIND  61
            +NKTEKPT K+L D+AKKGQSFK KDL    + L G   ++S+ S+++ M + + +I ++
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   FEINEGKYffavvivffkiigfPLFFCVLSAVLPTLVQTKFVLATKAIKIDFSVLNPVKG  121
            F+ + + Y +AV  + +K +   +++C++ + LP+L+Q+ FVLAT A+K ++S LNPV G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  LKKIFSIKTIKEFFKSillliilalTTYFFWINDRKIIFSQVFSSVDGLYLIWGRLFKDI  181
             KK+FS++T+K+  K++L L  + +++ + W + +  IFSQ+ +++ G+ +IW  L+  +
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLAL  182

Query  182  ILFFLAFSILVIILDFVIEFILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILS  241
            +L  LA +++V++LD + E++L MKDM MDK+E+KRE  EQEG+ E KS+RRE+H+EILS
Sbjct  183  VLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILS  242

Query  242  EQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPTV  301
            EQ KSDI NS+L+V NPTHI+IGIYF+PE+ P P IS+ ETNQ ALAVR YA+ VG+P +
Sbjct  243  EQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVI  302

Query  302  RDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENT  341
             D+KLAR L+KTH +Y +V +E++DEVLRL+VWLE+VEN+
Sbjct  303  VDIKLARSLFKTHRRYDLVSLEEIDEVLRLLVWLEEVENA  342

59) BTH_II0839 in NC_007650


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  238 bits (886),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 155/344 (46%), Positives = 244/344 (71%), Gaps = 1/344 (0%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALVVIATGALSAPALVDLTRVAAEFTRIASTG  61
            ++KTEKPT K+L D+AKKGQ+FK++D++   +   G     +   +    + +  I +  
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AQPNPGAYALAWAKLFLRIAAPFVLLCAAVGALPSLVQSRFTLAVESIRFDLTALDPVKG  121
             + + + Y+LA   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+PV G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  MKRLFSWRSVKDAVKALLYVGVFAITVRVFADLYHHDVFGLFRARPALLGHMWIvltvrl  181
             K+LFS R+VKD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L + L
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLAL  182

Query  182  vllfllcalpvlivDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQELLS  241
            VL  L CAL VL++DA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H E+LS
Sbjct  183  VLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILS  242

Query  242  EEIKANVEQSDFIVANPTHIAIGIYVNPDIVPIPFVSVRETNARALAVIRHAEACGVPVV  301
            E++K+++E+S +IVANPTHI+IGIY +P+++PIP +SV ETN RALAV   AE  GVPV+
Sbjct  243  EQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVI  302

Query  302  RNVALARSIYRNSPRRYSFVNQDDIDGVMRVLIWLKEVEAANRG  345
             ++ LARS+++ + RRY +V+ ++ID V+R+L+WL EVE A ++
Sbjct  303  VDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKD  345

60) bsaZ in NC_006349


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QSNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFADLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

61) bsaZ in NC_008835


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QSNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFADLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

62) bsaZ in NC_009079


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QSNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFADLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

63) bsaZ in NC_017832


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFAGLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

64) BURPS668_A2164 in NC_009075


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFAGLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

65) spaS in NC_021877


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFAGLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

66) bsaZ in NC_007435


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 160/357 (45%), Positives = 254/357 (72%), Gaps = 9/357 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFAGLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPETRAL  354
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+   +
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEV  354

67) BURPS1106A_A2076 in NC_009078


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (885),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFADLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

68) BPC006_II2058 in NC_018529


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (885),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFADLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

69) bsaZ in NC_006351


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  237 bits (885),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 160/353 (46%), Positives = 253/353 (72%), Gaps = 9/353 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPA-LVDLTRIAA--EFVRIA  58
            ++KTEKPT K+L D+AKKGQ+FK++D++    IA  +L++ A LV    +     +++I 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLI----IACLTLGGIAYLVSYGSFNEFMGIIKII  58

Query  59   STGA-QPNPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALD  117
             ++  + + + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+
Sbjct  59   IADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALN  118

Query  118  PVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFADLYHADVFGLFRARPALLGHMWIvl  177
            PV G K+LFS R+ KD+VK+LLY++ F ++  +    Y  ++F+ + +    ++ +W  L
Sbjct  119  PVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tvrlvllfllcalpvlilDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL+LDA  EYFL  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IG+Y +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VPVVRNVALARSIYRNSPRRYSFVSHDDIDGVMRVLIWLGEVEAANRGGPPPE  350
            VPV+ ++ LARS+++ + RRY +VS ++ID V+R+L+WL EVE A ++   P+
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGKDVIQPQ  350

70) spaS2 in NC_010694


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  235 bits (877),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 157/358 (44%), Positives = 249/358 (70%), Gaps = 10/358 (2%)

Query  2    AEKTEKPTDKRRRDSAKKGQTFKSKDLITTTTLLAGVCYL-AYAINFHPFISFYSLVLRE  60
            ++KTEKPT KR  DSAKKGQ+FKSKDLI +   L+G+ YL +Y+ +F+ F+++  +++ +
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYG-SFNEFMGIIKIIIAD  61

Query  61   GDKISLNDFLVELMRVFFTLSLPFIAVCTIAGAVLTLLQTRFSIATEAIKLNFKALNPVQ  120
                S+ D+ + +  + +   +PF+ +C + +A+ +LLQ+ F +ATEA+K N+ ALNPV+
Sbjct  62   NFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GFKKIFSMRTIKELVKSLLYLIVFACS---CYSLIRVDLGQAISIYNGSIDVLISVWTAL  177
            G KK+FSMRT+K+ VK+LLYL  F  +   C    +V++   +S  NG+I  +  +W  L
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI---FSQLNGNIVGIAVIWREL  178

Query  178  TMKAVMIFIAWSVFVLLIDFIAEYFLHSKDMKMDKHEVKQERKESDGNPEIKGARRRAHH  237
             +  V+  +A +++VLL+D IAEYFL  KDMKMDK+EVK+E KE +GNPE+K+ RR  H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  EILSGEEMAAIRNSEVVMANPTHIAIAIYFNPDVASLPFIALRSTNMKARAAIAYAEKIG  297
            EILS +  + I NS +++ANPTHI+I+IYF+P++ ++P I++  TN +A A  AYAEK+G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  IPVVRYIPLARRLYHNYSQYSFISINDDALMEVMDILIWLRNVEAAGMDIPDKPDVSV  355
            +PV+  I LAR L+    +Y ++S+++  + EV+ +L+WL +VE AG D+ +  +  V
Sbjct  299  VPVIVDIKLARSLFKTHRRYDLVSLEE--IDEVLRLLVWLEEVENAGKDVIQPQENEV  354

71) SG0572 in NC_007712


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  230 bits (859),  Expect = 8e-62, Method: Compositional matrix adjust.
 Identities = 154/344 (45%), Positives = 248/344 (73%), Gaps = 4/344 (1%)

Query  2    AEKTEKPTEKRSRESAQKGQSFKVKDVTTTVVLIGGIAYL-GYGMDFQPFIAFYNNVVLN  60
            ++KTEKPT KR  +SA+KGQSFK KD+  + + +GGIAYL +YG  F+ F+++ + ++ +
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYG-SFNEFMGIIKIIIAD  61

Query  61   GERLSYQAYLISLAMLFMQLTLPIVAVCFIAGTFSTLLQTRMVIATKAIKLNFDALNPVK  120
                S   Y +++  + ++  +P++ +C++ +++++LLQ+  V+AT A+K N+ ALNPV 
Sbjct  62   NFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVE  121

Query  121  GLKRIFNLRAVKELVKTLCYVAVFVVGVNYFQSHYLKELLSIYHGNIWQVIRIWSELAVK  180
            G K++F++R+VK+ VKTL Y++ FVV+       Y  E++S  +GNI  +  IW EL + 
Sbjct  122  GAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIAVIWRELLLA  181

Query  181  LVFIYVGVSLIVLVLDGLCEYFLQFKDMKMEKHEVKQEHKENEGNPEIKSARRNAHFELL  240
            LV+  ++ +LIVL+LD++ EYFL  KDMKM+K+EVK+E KE+EGNPE+KS RR+ H E+L
Sbjct  182  LVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEIL  241

Query  241  SGAEQAAIRSSEMILANPTHIALGIFFNPDVAMLPFITLRATNMKARAIIAYAEKVGVPV  300
            S   ++ I +S +I+ANPTHI++GI+F+P++  +P I++  TN +A A+ AYAEKVGVPV
Sbjct  242  SEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPV  301

Query  301  VRSIPLARRLYKNYTVHSFISLNDNDLIEIMRILIWLKQVESAG  344
            +  I LAR L+K      ++SL++ D  E++R+L+WL +VE+AG
Sbjct  302  IVDIKLARSLFKTHRRYDLVSLEEID--EVLRLLVWLEEVENAG  343

72) spaS in NC_021174


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  222 bits (827),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 151/347 (44%), Positives = 241/347 (70%), Gaps = 9/347 (2%)

Query  2    AEKTEKPTAKKLRDAAKKGQTFKARDIVALVVIATGALAAPALVDLTRIAAEFARIASSG  61
            ++KTEKPT K+L D+AKKGQ+FK++D++   +   G     +   +  + + +  I +  
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   AQPDPGAYAFAWAKLFLRIAAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALDPVKG  121
             +   + Y++A   + L+   PF+LLC   +ALP+L+Q+ F LA E+++ +L+AL+PV G
Sbjct  63   FDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEG  122

Query  122  MKRLFSWRSVKDAAKALLYvavfavtvrvfaDLC----HHDVFGLFRARAALLGHMWivl  177
             K+LFS R+VKD+ K+LLY++ F V+      +C      ++F+ + +    ++ +W  L
Sbjct  123  AKKLFSMRTVKDTVKTLLYLSSFVVAAI----ICWKKYKVEIFSQLNGNIVGIAVIWREL  178

Query  178  tirlvllfllcalpvlivDAAVEYYLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQ  237
             + LVL  L CAL VL++DA  EY+L  +++KMDK+EVK+E KE EGN E+KSKRRE+H 
Sbjct  179  LLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHM  238

Query  238  ELLSEEIKANVEQSDFIVANPTHIAIGIYVNPDIVPIPFVSVRETNARALAVIRHAEACG  297
            E+LSE++K+++E+S +IVANPTHI+IGIY +P+++PIP +SV ETN RALAV   AE  G
Sbjct  239  EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVG  298

Query  298  VTVVRNVALARSIYRNSPRRYSFVNQDDVDGVMRVLIWLKEVEAANR  344
            V V+ ++ LARS+++ + RRY +V+ +++D V+R+L+WL EVE A +
Sbjct  299  VPVIVDIKLARSLFK-THRRYDLVSLEEIDEVLRLLVWLEEVENAGK  344

73) EAM_2656 in NC_013971


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  190 bits (705),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 151/361 (42%), Positives = 242/361 (68%), Gaps = 16/361 (4%)

Query  2    AEKTEKPTDKRRRDSAKKGQTFKSKDlittvtlltgggylAYVMDFRSFTSFYSLV---L  58
            ++KTEKPT KR  DSAKKGQ+FKSKDLI +   L G    AY++ + SF  F +++   +
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGI---AYLVSYGSFNEFMGIIKIII  59

Query  59   REGDKISLNDFLTELMRVFLNLSLPFIAVCTVAGAVMTLLQTRFSIATEAIKLNFEALDP  118
             +    S+ D+   +  + L+  +PF+ +C V +A+ +LLQ+ F +ATEA+K N+ AL+P
Sbjct  60   ADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNP  119

Query  119  VKGLKKIFSMRTIKELVKSIFYLVVFICT---CYNLIHGDLIRAVSIYNGSIEELISVWI  175
            V G KK+FSMRT+K+ VK+++YL  F+ +   C +    +++  +   NG+I  +  +W 
Sbjct  120  VEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQL---NGNIVGIAVIWR  176

Query  176  TLTIKAVMVFIGWSAFVLIIDFFVEYFLHFKDMKMDKHEVKQEHKESDGNPEIKGARRRA  235
             L +  V+  ++ + +VL++D + EYFL  KDMKMDK+EVK+E KE +GNPE+K+ RR  
Sbjct  177  ELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREV  236

Query  236  HHEILSGEDMAAIRNSEVVMANPTHIAIAIYFNPEVASLPFIALRSTNMkakaaiayaek  295
            H EILS +  + I NS +++ANPTHI+I+IYF+PE+ ++P I++  TN +A A  AYAEK
Sbjct  237  HMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEK  296

Query  296  igiPVVRYIPLTRRLYHTYSQHSFISLHDDSLMEVMDILIWLRQVETAGMEL--PASSGV  353
            +G+PV+  I L+R L+ T  +  ++SL++  + EV+ +L+WL +VE AG ++  P  + V
Sbjct  297  VGVPVIVDIKLARSLFKTHRRYDLVSLEE--IDEVLRLLVWLEEVENAGKDVIQPQENEV  354

Query  354  K  354
            +
Sbjct  355  R  355

74) spaS1 in NC_013961


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  190 bits (705),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 151/361 (42%), Positives = 242/361 (68%), Gaps = 16/361 (4%)

Query  2    AEKTEKPTDKRRRDSAKKGQTFKSKDlittvtlltgggylAYVMDFRSFTSFYSLV---L  58
            ++KTEKPT KR  DSAKKGQ+FKSKDLI +   L G    AY++ + SF  F +++   +
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGI---AYLVSYGSFNEFMGIIKIII  59

Query  59   REGDKISLNDFLTELMRVFLNLSLPFIAVCTVAGAVMTLLQTRFSIATEAIKLNFEALDP  118
             +    S+ D+   +  + L+  +PF+ +C V +A+ +LLQ+ F +ATEA+K N+ AL+P
Sbjct  60   ADNFDQSMADYSLAVFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNP  119

Query  119  VKGLKKIFSMRTIKELVKSIFYLVVFICT---CYNLIHGDLIRAVSIYNGSIEELISVWI  175
            V G KK+FSMRT+K+ VK+++YL  F+ +   C +    +++  +   NG+I  +  +W 
Sbjct  120  VEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQL---NGNIVGIAVIWR  176

Query  176  TLTIKAVMVFIGWSAFVLIIDFFVEYFLHFKDMKMDKHEVKQEHKESDGNPEIKGARRRA  235
             L +  V+  ++ + +VL++D + EYFL  KDMKMDK+EVK+E KE +GNPE+K+ RR  
Sbjct  177  ELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREV  236

Query  236  HHEILSGEDMAAIRNSEVVMANPTHIAIAIYFNPEVASLPFIALRSTNMkakaaiayaek  295
            H EILS +  + I NS +++ANPTHI+I+IYF+PE+ ++P I++  TN +A A  AYAEK
Sbjct  237  HMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEK  296

Query  296  igiPVVRYIPLTRRLYHTYSQHSFISLHDDSLMEVMDILIWLRQVETAGMEL--PASSGV  353
            +G+PV+  I L+R L+ T  +  ++SL++  + EV+ +L+WL +VE AG ++  P  + V
Sbjct  297  VGVPVIVDIKLARSLFKTHRRYDLVSLEE--IDEVLRLLVWLEEVENAGKDVIQPQENEV  354

Query  354  K  354
            +
Sbjct  355  R  355

75) spaS3 in NC_013961


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  173 bits (639),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 131/326 (41%), Positives = 213/326 (66%), Gaps = 12/326 (3%)

Query  2    AQKTELPTEKKRKDSAKKGHSLKIKDFVTTVTLISGSYFLLHGMDFSRFIDCYTNILIDV  61
            ++KTE PT K+  DSAKKG+S+K KD++ +   ++G  +L+    F+ F++    I+ D 
Sbjct  3    SNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADN  62

Query  62   SSVNINDFMLQMMYIF-LGLSF--PLIGICTLSGMIATLCQTRFTIATQALKLNFKALNP  118
               ++ D+ L    +F +GL +  P++ +C + + +++L Q+ F +AT+ALK N+ ALNP
Sbjct  63   FDQSMADYSLA---VFGIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNP  119

Query  119  VEGLKRIFSMRTIKEFVKSLCYLMVF---SCTCYNLIVNDLKHALVIHYAGIAQLIVSML  175
            VEG K++FSMRT+K+ VK+L YL  F   +  C +    ++   L  +  GIA   V   
Sbjct  120  VEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEIFSQLNGNIVGIA---VIWR  176

Query  176  SLTVKAVTIFIAYSLVVLCADFIMEYFLHVKDLKMDKHEVKQERKESDGNPQIKSARRRA  235
             L +  V   +A +L+VL  D I EYFL +KD+KMDK+EVK+E KE +GNP++KS RR  
Sbjct  177  ELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREV  236

Query  236  HQELLSGEEMAAVRKSSVIMVNPTHIAMAIFFNPELAPLPFIALRASNFKARAVLVYAEK  295
            H E+LS +  + + +S +I+ NPTHI+++I+F+PEL P+P I++  +N +A AV  YAEK
Sbjct  237  HMEILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEK  296

Query  296  IGIPVVRNIFLTRRLYKSYVQHSFIS  321
            +G+PV+ +I L+R L+K+  +  ++S
Sbjct  297  VGVPVIVDIKLARSLFKTHRRYDLVS  322

76) S70_09780 in NC_017731


> NC_003197_P3|28|G28|16766193|NP_461808.1|Salmonella_typhimurium_LT2|-|25692..26762|spaS|STM2887|surface 
presentation of antigens 
protein SpaS
Length=356

 Score =  147 bits (540),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 106/264 (41%), Positives = 187/264 (71%), Gaps = 6/264 (2%)

Query  15   DSAKKGQSFKSKDsvaalvlvvsvYVITGTTSLFEIAGLMKRILLSPYNININILLREFI  74
            DSAKKGQSFKSKD + A + + ++  + +  S+ E+ G++K I+   ++ ++       +
Sbjct  16   DSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADNFDQSMADYSLAVF  75

Query  75   GAFLKIVIPVLLACFISGAILSLLQSRFRLATEAIKVDFSKLNPISGIKKIFSLNSLKEL  134
            G  LK +IP +L C++ +A+ +LLQ+ F LATEA+K ++S LNP+ G KK+FS+ ++K+ 
Sbjct  76   GIGLKYLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEGAKKLFSMRTVKDT  135

Query  135  IKAFLYLIVFSISAMVFFILWRH---DIFLLYRSTINGVIYQWVGLCATfvvvflavalf  191
            +K++LYL  F ++A++    W+    +IF    + I G+   W  L  ++V+  LA AL+
Sbjct  136  VKTLLYLSSFVVAAIIC---WKKYKVEIFSQLNGNIVGIAVIWRELLLALVLTCLACALI  192

Query  192  iilvDVVTEFFLFIKGLKMEKQEVKKEYKDNEGDPHLKSARKGLHQEILSEEVKSNVRNS  251
            ++L+D ++E+FL +K++KM+K+EVK+E K++EG+P++KS R+ +H EILSE+VKS++ NS
Sbjct  193  VLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEILSEQVKSDIENS  252

Query  252  TFVMANPTHIAMLIYYNNDIAPLP  275
             +++ANPTHI++ IY++ ++ P+P
Sbjct  253  RLIVANPTHITIGIYFKPELMPIP  276