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PAthogenisity Island DataBase (PAI DB)

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Homologs of lpl6 gene of NC_002745_P1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) unnamed
( - )

NC_016941
(Staphylococcus aureus MSHR1132)

e-200

80.3

2) SAR0440
( - )

NC_002952
(Staphylococcus aureus MRSA252)

e-114

81.9

• Sequence Alignments

1) unnamed in NC_016941


>NC_002745_P1|28|G28|15926120|NP_373653.1|Staphylococcus_aureus_subsp._aureus_N315|+|25902..26696|lpl6|SA0402|hypothetical 
          Length = 795

 Score = 694 bits (1790), Expect = e-200
 Identities = 449/561 (80%)
 Strand = Plus / Plus

Query: 1   aaagaagaacaaatcaaaaagagttttgcgaaaatattagacatgtatccaattaagaat 60
           ||||||| |||||| |||||||||||| ||||||  ||||| ||||||||||||||||||
Sbjct: 115 aaagaagcacaaattaaaaagagtttttcgaaaacgttagatatgtatccaattaagaat 174

Query: 61  ctcgaggacttatacgacaaagaaggatatcgagatggtgaatttaaaaagggcgataag 120
           |||||| |  |||| ||||||||||||||||| ||||| ||||||||||| || ||||| 
Sbjct: 175 ctcgagaatctatatgacaaagaaggatatcgtgatggcgaatttaaaaaaggtgataaa 234

Query: 121 gggacttggactttactcacaagttttgctaaaagtaacaaaccaggagtaatagatgat 180
           |||||||||||  ||   |||  |||||||||||| ||||| | ||| | |||  ||   
Sbjct: 235 gggacttggacaatatcaacagattttgctaaaagcaacaagcaaggtgaaatgaatagc 294

Query: 181 gaaggcatggtgctatatctaaatagaaataccaaaaaggcaacaggttattattttgta 240
           ||||| ||||| ||| || | ||||||||||| |  |  |||||||| ||||||  ||||
Sbjct: 295 gaaggtatggtactacattttaatagaaatacgaggacagcaacaggatattatactgta 354

Query: 241 aataaaatttatgatgatattagcaaaaatcagaatgagaaaaaataccgtgttgaactt 300
           |  | || |||||||||  |    ||          || |||||||| ||||||||| ||
Sbjct: 355 agaacaacttatgatgaagtggataagttggcacgcgaaaaaaaatatcgtgttgaattt 414

Query: 301 aaaaataataagattgttcttttggataatgtagaagacgaaaaccttaaacaaaaaatt 360
           ||||| |||||||| ||||| ||||| || |||||||| ||||| |||||||||||||| 
Sbjct: 415 aaaaacaataagatagttctattggacaaagtagaagatgaaaatcttaaacaaaaaata 474

Query: 361 gaaaattttaaattttttagtcagtatgccgattttaaagatttaaaaaattatcgagat 420
           |||||||||||||||||  | || ||||||||||||||||| || |||||||||  | ||
Sbjct: 475 gaaaattttaaatttttcgggcaatatgccgattttaaagacttgaaaaattataaaaat 534

Query: 421 ggaagtataacaactaatgaaaatgtaccgagctatgaagcagaatacaaaatggaa-aa 479
           ||||| ||| | |  ||||||||||| ||    ||||||||||| ||||||| |||| ||
Sbjct: 535 ggaagaatatctagcaatgaaaatgttccttattatgaagcagagtacaaaa-ggaataa 593

Query: 480 tagtgatagtaatgtaaaaaaacttagagaagtttatccaattacaataaaaaaggctcc 539
           ||||||| | |||||||||||||||||||||   || ||||||||||  ||  || ||||
Sbjct: 594 tagtgatggaaatgtaaaaaaacttagagaaaagtacccaattacaaccaagcagtctcc 653

Query: 540 aatattaaagttacatataga 560
           |||||||||  | ||||||||
Sbjct: 654 aatattaaaactgcatataga 674

2) SAR0440 in NC_002952


>NC_002745_P1|28|G28|15926120|NP_373653.1|Staphylococcus_aureus_subsp._aureus_N315|+|25902..26696|lpl6|SA0402|hypothetical 
          Length = 795

 Score = 409 bits (1054), Expect = e-114
 Identities = 244/293 (83%)
 Strand = Plus / Plus

Query: 53  tttttataataagttgtaatagttcaagcgatactgcggaaaaagcaaaagaagattcaa 112
           ||||||||||| ||||| |||  |||||||||||||| |||||  ||||||||| |||||
Sbjct: 56  tttttataataggttgtgataaatcaagcgatactgcagaaaatccaaaagaaggttcaa 115

Query: 113 aagaagaacaaattaaaaagagctttgcgaaaacgttagatatgtatccaatcaaaaatc 172
           |||||| ||||||||||||||| ||| ||||||||||||||||||||||||| || ||||
Sbjct: 116 aagaagcacaaattaaaaagagtttttcgaaaacgttagatatgtatccaattaagaatc 175

Query: 173 tcgaggatttatacgacaaagaaggttatcgagatgacgaatttaaaaaaggcgataagg 232
           ||||| || |||| ||||||||||| ||||| |||| ||||||||||||||| ||||| |
Sbjct: 176 tcgagaatctatatgacaaagaaggatatcgtgatggcgaatttaaaaaaggtgataaag 235

Query: 233 gtacatggactttactcacaagttttgctaaaagtaacaaaccaggcgagatagatgacg 292
           | || |||||  ||   |||  |||||||||||| ||||| | ||| || ||  ||  ||
Sbjct: 236 ggacttggacaatatcaacagattttgctaaaagcaacaagcaaggtgaaatgaatagcg 295

Query: 293 aaggtatggttttattccttaatagaaatacaaagaaggcaacaggatattat 345
           ||||||||||  ||    ||||||||||||| | ||  |||||||||||||||
Sbjct: 296 aaggtatggtactacattttaatagaaatacgaggacagcaacaggatattat 348


 Score = 358 bits (923), Expect = 6e-99
 Identities = 232/288 (81%)
 Strand = Plus / Plus

Query: 389 aaaaaaatatcatgttgaattaaaaaataataagatagtacttttggataaagtagaaga 448
           ||||||||||| ||||||||| ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 393 aaaaaaatatcgtgttgaatttaaaaacaataagatagttctattggacaaagtagaaga 452

Query: 449 tccaaatctcaaaaataaaatagaaaattttaaattctttagtcagtatgctgattttag 508
           |  |||||| ||| | |||||||||||||||||||| ||  | || ||||| ||||||| 
Sbjct: 453 tgaaaatcttaaacaaaaaatagaaaattttaaatttttcgggcaatatgccgattttaa 512

Query: 509 agatcttaaatattataaaaatggaaatatatcaagtacagataatgtgccaagctacga 568
           |||  | ||| |||||||||||||||  ||||| || |  || ||||| ||    || ||
Sbjct: 513 agacttgaaaaattataaaaatggaagaatatctagcaatgaaaatgttccttattatga 572

Query: 569 tgcagaatataaaatgagtaatacggataaaaatgtaaaaaaacttagagaagtttatcc 628
            ||||| || |||| || |||||  |||  ||||||||||||||||||||||   || ||
Sbjct: 573 agcagagtacaaaaggaataatagtgatggaaatgtaaaaaaacttagagaaaagtaccc 632

Query: 629 tattacaaccaaaaagtcgccagtattaaaattacatatagatggcga 676
            |||||||||||  |||| ||| |||||||| | |||||||| |||||
Sbjct: 633 aattacaaccaagcagtctccaatattaaaactgcatatagacggcga 680