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Homologs of hrcR gene of AY597277

479

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HrcR
( YP_234300.1 )

type III secretion system protein

NC_007005
(Pseudomonas syringae B728a)

2e-90

2) hrcR
( YP_273544.2 )

type III secretion system protein

NC_005773
(Pseudomonas syringae 1448A)

4e-90

3) hrcR
( NP_791222.3 )

type III secretion protein HrcR

NC_004578
(Pseudomonas syringae DC3000)

5e-82

4) Pmen_0046
( YP_001185552.1 )

type III secretion system protein

NC_009439
(Pseudomonas mendocina ymp)

4e-81

5) PSEBR_a5382
( YP_004356892.1 )

type III secretion protein

NC_015379
(Pseudomonas brassicacearum NFM421)

4e-72

6) hrcR
( YP_005210969.1 )

protein HrcR

NC_016830
(Pseudomonas fluorescens F113)

1e-71

7) hcrR
( YP_005804091.1 )

Harpin secretion protein HrcR

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-69

8) hrcR
( YP_002650074.1 )

type III secretion system protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-69

9) hrcR
( YP_005818255.1 )

type III secretion system protein

NC_017445
(Erwinia sp. Ejp617)

2e-69

10) Ser39006_2919
( YP_008523301.1 )

Yop virulence translocation R

NC_022268
(Serratia sp. ATCC 39006)

2e-69

11) hrcR
( YP_003539968.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

3e-69

12) hcrR
( YP_003529886.1 )

Harpin secretion protein HrcR

NC_013961
(Erwinia amylovora CFBP1430)

3e-69

13) hrcR
( YP_001906463.1 )

type III secretion system protein

NC_010694
(Erwinia tasmaniensis Et1/99)

5e-69

14) hrcR
( YP_003883246.1 )

type III secretion inner membrane protein

NC_014500
(Dickeya dadantii 3937)

3e-68

15) hrcR
( YP_050174.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

3e-68

16) PC1_2212
( YP_003017787.1 )

Yop virulence translocation R

NC_012917
(Pectobacterium carotovorum PC1)

5e-68

17) PCC21_022910
( YP_006646947.1 )

type III secretion system protein

NC_018525
(Pectobacterium carotovorum PCC21)

5e-68

18) Dd1591_1885
( YP_003004214.1 )

type III secretion system protein

NC_012912
(Dickeya zeae Ech1591)

2e-67

19) D781_3938
( YP_007346313.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_020064
(Serratia marcescens FGI94)

1e-66

20) rscR
( YP_006322231.1 )

type III secretion protein RscR

NC_017911
(Pseudomonas fluorescens A506)

9e-67

21) Dd586_1882
( YP_003333446.1 )

Yop virulence translocation R

NC_013592
(Dickeya dadantii Ech586)

2e-66

22) H045_00190
( YP_007395610.1 )

type III secretion system protein YscR

NC_020209
(Pseudomonas poae RE*1-1-14)

5e-66

23) Marme_1071
( YP_004312182.1 )

Yop virulence translocation R

NC_015276
(Marinomonas mediterranea MMB-1)

2e-63

24) rscR
( YP_002870380.1 )

type III secretion system protein

NC_012660
(Pseudomonas fluorescens SBW25)

7e-61

25) H650_14845
( YP_008108769.1 )

hypothetical protein

NC_021500
(Enterobacter sp. R4-368)

2e-47

26) yscR
( YP_436217.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

2e-43

27) hrcR
( YP_003774221.1 )

type III secretion HrcR transmembrane protein

NC_014323
(Herbaspirillum seropedicae SmR1)

2e-41

28) HCH_03263
( YP_434447.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

3e-40

29) yscR
( YP_004677245.1 )

Yop proteins translocation protein R

NC_015717
(Hyphomicrobium sp. MC1)

2e-39

30) ascR
( YP_001144302.1 )

type III secretion system protein

NC_009350
(Aeromonas salmonicida A449)

1e-38

31) pscR
( YP_005975938.1 )

type III secretion system protein

NC_017548
(Pseudomonas aeruginosa M18)

1e-38

32) pscR
( YP_005980835.1 )

type III secretion system protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

1e-38

33) pscR
( NP_250384.1 )

type III secretion system protein

NC_002516
(Pseudomonas aeruginosa PAO1)

1e-38

34) ssaR
( YP_008132244.1 )

flagellar biosynthesis protein FliP

NC_021577
(Pseudomonas aeruginosa RP73)

1e-38

35) pscR
( YP_791552.1 )

type III secretion system protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

1e-38

36) G655_16715
( YP_007710183.1 )

type III secretion system protein YscR

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-38

37) PADK2_17235
( YP_006483428.1 )

type III secretion system protein YscR

NC_018080
(Pseudomonas aeruginosa DK2)

2e-38

38) C770_GR4pC1264
( YP_007193547.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_019848
(Sinorhizobium meliloti GR4)

4e-38

39) escR
( NP_902277.1 )

type III secretion system protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

7e-38

40) bscR
( YP_006967888.1 )

type III secretion protein

NC_019382
(Bordetella bronchiseptica 253)

1e-37

41) bscR
( NP_888177.1 )

type III secretion system protein

NC_002927
(Bordetella bronchiseptica RB50)

1e-37

42) bscR
( NP_884486.1 )

type III secretion system protein

NC_002928
(Bordetella parapertussis 12822)

1e-37

43) bscR
( YP_006895376.1 )

type III secretion protein

NC_018828
(Bordetella parapertussis Bpp5)

1e-37

44) SFHH103_04957
( YP_005191562.1 )

RhcR-like, type III secretion system

NC_016815
(Sinorhizobium fredii HH103)

2e-37

45) rhcR
( YP_002824496.1 )

type III secretion system protein

NC_012586
(Sinorhizobium fredii NGR234)

2e-37

46) bscR
( YP_006899833.1 )

type III secretion protein

NC_018829
(Bordetella bronchiseptica MO149)

4e-37

47) bscR
( YP_006625537.1 )

type III secretion protein

NC_018518
(Bordetella pertussis 18323)

4e-37

48) bscR
( YP_005590274.1 )

type III secretion system protein

NC_017223
(Bordetella pertussis CS)

4e-37

49) bscR
( NP_880884.1 )

type III secretion system protein

NC_002929
(Bordetella pertussis Tohama I)

4e-37

50) YE105_P0026
( YP_004424928.1 )

type III secretion system protein

NC_015475
(Yersinia enterocolitica 105.5R(r))

4e-37

51) yscR
( YP_001004082.1 )

type III secretion system protein

NC_008791
(Yersinia enterocolitica 8081)

4e-37

52) Y11_p0741
( YP_006007922.1 )

type III secretion inner membrane protein

NC_017565
(Yersinia enterocolitica Y11)

4e-37

53) yscR
( NP_995367.1 )

type III secretion system protein

NC_005813
(Yersinia pestis 91001)

4e-37

54) yscR
( YP_001604476.1 )

type III secretion system protein

NC_010157
(Yersinia pestis Angola)

4e-37

55) YPA_CD0018
( YP_636810.1 )

type III secretion system protein

NC_008122
(Yersinia pestis Antiqua)

4e-37

56) yscR
( NP_395178.1 )

type III secretion system protein

NC_003131
(Yersinia pestis CO92)

4e-37

57) yscR
( YP_005503177.1 )

needle complex export protein

NC_017153
(Yersinia pestis D106004)

4e-37

58) yscR
( YP_005506960.1 )

needle complex export protein

NC_017157
(Yersinia pestis D182038)

4e-37

59) YPDSF_3973
( YP_001154602.1 )

type III secretion system protein

NC_009377
(Yersinia pestis Pestoides F)

4e-37

60) yscR
( YP_003560536.1 )

needle complex export protein

NC_014017
(Yersinia pestis Z176003)

4e-37

61) pYV0071
( YP_068480.1 )

type III secretion system protein

NC_006153
(Yersinia pseudotuberculosis IP 32953)

4e-37

62) YPTS_4289
( YP_001874689.1 )

type III secretion system protein

NC_010635
(Yersinia pseudotuberculosis PB1/+)

4e-37

63) Sbal195_2278
( YP_001554706.1 )

type III secretion system protein

NC_009997
(Shewanella baltica OS195)

4e-37

64) Sbal678_2288
( YP_005273495.1 )

Yop virulence translocation R

NC_016901
(Shewanella baltica OS678)

4e-37

65) SVI_2230
( YP_003556979.1 )

type III secretion system EscR protein

NC_014012
(Shewanella violacea DSS12)

4e-37

66) USDA257_c21640
( YP_006397503.1 )

translocation protein y4yL

NC_018000
(Sinorhizobium fredii USDA 257)

4e-37

67) Sbal175_2391
( YP_006020948.1 )

Yop virulence translocation R

NC_017571
(Shewanella baltica BA175)

5e-37

68) Sbal117_2090
( YP_006037321.1 )

Yop virulence translocation R

NC_017579
(Shewanella baltica OS117)

5e-37

69) Sbal_1974
( YP_001050347.1 )

type III secretion system protein

NC_009052
(Shewanella baltica OS155)

5e-37

70) NH44784_014541
( YP_008028549.1 )

Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

1e-36

71) pscR
( YP_002441218.1 )

type III secretion system protein

NC_011770
(Pseudomonas aeruginosa LESB58)

1e-36

72) RHE_PD00059
( NP_659978.1 )

type III secretion system protein

NC_004041
(Rhizobium etli CFN 42)

1e-36

73) hrcR
( YP_001984354.1 )

type III secretion system protein

NC_010996
(Rhizobium etli CIAT 652)

1e-36

74) sctR
( NP_930977.1 )

type III secretion system protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-36

75) sctR
( YP_003039885.1 )

type iii secretion component protein sctr

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-36

76) DvMF_2439
( YP_002436848.1 )

type III secretion system protein

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

3e-36

77) Dvul_2984
( YP_961183.1 )

type III secretion system protein

NC_008741
(Desulfovibrio vulgaris DP4)

7e-36

78) DVUA0122
( YP_009162.1 )

type III secretion system protein

NC_005863
(Desulfovibrio vulgaris Hildenborough)

7e-36

79) Deval_3224
( YP_005704003.1 )

Yop virulence translocation R

NC_017311
(Desulfovibrio vulgaris RCH1)

7e-36

80) ETAC_04225
( YP_007628336.1 )

type III secretion system protein YscR

NC_020796
(Edwardsiella tarda C07-087)

2e-35

81) esaR
( YP_003294936.1 )

type three secretion apparatus protein R

NC_013508
(Edwardsiella tarda EIB202)

2e-35

82) esaR
( YP_005698435.1 )

protein EsaR

NC_017309
(Edwardsiella tarda FL6-60)

2e-35

83) rhcR
( NP_768459.1 )

type III secretion system protein

NC_004463
(Bradyrhizobium japonicum USDA 110)

4e-35

84) rhcR
( YP_005612838.1 )

RhcR protein

NC_017249
(Bradyrhizobium japonicum USDA 6)

4e-35

85) S58_72190
( YP_007516770.1 )

type III secretion system protein YscR

NC_020453
(Bradyrhizobium oligotrophicum S58)

7e-35

86) C770_GR4pB210
( YP_007192280.1 )

Type III secretory pathway, component EscR

NC_019847
(Sinorhizobium meliloti GR4)

4e-34

87) Meso_0110
( YP_672680.1 )

type III secretion system protein

NC_008254
(Chelativorans sp. BNC1)

4e-34

88) sctR
( YP_007365636.1 )

type III secretion system protein

NC_020127
(Lawsonia intracellularis N343)

1e-33

89) SctR
( YP_594912.1 )

type III secretion system protein

NC_008011
(Lawsonia intracellularis PHE/MN1-00)

1e-33

90) Y11_35451
( YP_006007044.1 )

type III secretion inner membrane protein

NC_017564
(Yersinia enterocolitica Y11)

5e-34

91) yscR
( YP_005082209.1 )

Yop proteins translocation protein R

NC_016642
(Pseudovibrio sp. FO-BEG1)

9e-34

92) YE105_C0338
( YP_004296539.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-33

93) ECs4583
( NP_312610.1 )

type III secretion system protein

NC_002695
(Escherichia coli Sakai)

1e-33

94) escR
( YP_003236103.1 )

T3SS structure protein EscR

NC_013364
(Escherichia coli 11128)

2e-33

95) escR
( YP_003232138.1 )

type III secretion system protein

NC_013361
(Escherichia coli 11368)

2e-33

96) escR
( YP_003223490.1 )

T3SS structure protein EscR

NC_013353
(Escherichia coli 12009)

2e-33

97) escR
( YP_003501889.1 )

type III secretion system EscR protein

NC_013941
(Escherichia coli CB9615)

2e-33

98) escR
( YP_002331425.1 )

type III secretion system protein

NC_011601
(Escherichia coli E2348/69)

2e-33

99) epaP
( YP_002273179.1 )

type III secretion system protein

NC_011353
(Escherichia coli EC4115)

2e-33

100) escR
( NP_290283.1 )

type III secretion system protein

NC_002655
(Escherichia coli EDL933)

2e-33

101) ECO55CA74_21290
( YP_006161363.1 )

type III secretion system protein YscR

NC_017656
(Escherichia coli RM12579)

2e-33

102) escR
( YP_003080495.1 )

type III secretion system protein

NC_013008
(Escherichia coli TW14359)

2e-33

103) CDCO157_4318
( YP_006315183.1 )

type III secretion system protein

NC_017906
(Escherichia coli Xuzhou21)

2e-33

104) F504_4358
( YP_008238087.1 )

Type III secretion inner membrane protein (YscR)

NC_021745
(Ralstonia solanacearum FQY_4)

2e-33

105) hrcR
( NP_522421.1 )

type III secretion system protein

NC_003296
(Ralstonia solanacearum GMI1000)

2e-33

106) spaP
( YP_006216510.1 )

type III secretion system protein SpaP

NC_017731
(Providencia stuartii MRSN 2154)

2e-33

107) fliP1
( NP_991819.2 )

type III secretion system protein

NC_005810
(Yersinia pestis 91001)

2e-33

108) A1122_03785
( YP_005520452.1 )

type III secretion system protein YscR

NC_017168
(Yersinia pestis A1122)

2e-33

109) epaP
( YP_001608228.1 )

type III secretion system protein

NC_010159
(Yersinia pestis Angola)

2e-33

110) YPA_4012
( YP_653918.1 )

type III secretion system protein

NC_008150
(Yersinia pestis Antiqua)

2e-33

111) YPO0270
( YP_002345352.1 )

type III secretion system protein

NC_003143
(Yersinia pestis CO92)

2e-33

112) YPD4_0235
( YP_005503447.1 )

putative type III secretion apparatus protein

NC_017154
(Yersinia pestis D106004)

2e-33

113) YPD8_0240
( YP_005507323.1 )

putative type III secretion apparatus protein

NC_017160
(Yersinia pestis D182038)

2e-33

114) y0530
( NP_667867.1 )

type III secretion system protein

NC_004088
(Yersinia pestis KIM)

2e-33

115) YPN_3397
( YP_649324.1 )

type III secretion system protein

NC_008149
(Yersinia pestis Nepal516)

2e-33

116) YPDSF_3700
( YP_001165023.1 )

type III secretion system protein

NC_009381
(Yersinia pestis Pestoides F)

2e-33

117) YPZ3_0233
( YP_003566405.1 )

putative type III secretion apparatus protein

NC_014029
(Yersinia pestis Z176003)

2e-33

118) epaP
( YP_001402768.1 )

type III secretion system protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

2e-33

119) YPTB0327
( YP_068873.2 )

type III secretion system protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-33

120) YPTS_0351
( YP_001870797.1 )

type III secretion system protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

2e-33

121) YPK_3902
( YP_001722620.1 )

type III secretion system protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-33

122) PSPPH_2535
( YP_274731.1 )

type III secretion system protein

NC_005773
(Pseudomonas syringae 1448A)

3e-33

123) mlr8766
( NP_106869.1 )

type III secretion system protein

NC_002678
(Mesorhizobium loti MAFF303099)

1e-32

124) hrcR
( YP_003749779.1 )

Hypersensitivity response secretion protein hrcR, type III secretion system

NC_014310
(Ralstonia solanacearum PSI07)

2e-32

125) escR
( YP_003366517.1 )

T3SS structural protein EscR

NC_013716
(Citrobacter rodentium ICC168)

2e-32

126) REMIM1_PE00285
( YP_008368039.1 )

type III secretion system FliP/YscR family protein

NC_021909
(Rhizobium etli Mim1)

2e-32

127) hrcR
( YP_006032351.1 )

hrp protein hrcr

NC_017575
(Ralstonia solanacearum Po82)

2e-32

128) SFHH103_04305
( YP_006575326.1 )

hypothetical protein

NC_018294
(Sinorhizobium fredii HH103)

3e-32

129) USDA257_p02850
( YP_006529157.1 )

putative translocation protein y4yL

NC_018179
(Sinorhizobium fredii USDA 257)

3e-32

130) rhcR
( NP_444164.1 )

type III secretion system protein

NC_000914
(Sinorhizobium fredii NGR234)

5e-32

131) XC_3016
( YP_244084.1 )

type III secretion system protein

NC_007086
(Xanthomonas campestris 8004)

6e-30

132) hrcR
( NP_636600.1 )

type III secretion system protein

NC_003902
(Xanthomonas campestris ATCC 33913)

6e-30

133) xccb100_3079
( YP_001904484.1 )

type III secretion system protein

NC_010688
(Xanthomonas campestris B100)

6e-30

134) hrcR
( YP_005636495.1 )

type III secretion protein HrcR

NC_017271
(Xanthomonas campestris 756C)

7e-30

135) XOO_0095
( YP_449124.1 )

type III secretion system protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

7e-30

136) epaP
( YP_001911274.1 )

type III secretion system protein

NC_010717
(Xanthomonas oryzae PXO99A)

7e-30

137) SARI_01563
( YP_001570599.1 )

type III secretion system protein

NC_010067
(Salmonella enterica RSK2980)

9e-30

138) epaP
( YP_002146623.1 )

type III secretion system protein

NC_011149
(Salmonella enterica SL483)

9e-30

139) hrcR
( NP_640757.1 )

type III secretion system protein

NC_003919
(Xanthomonas axonopodis 306)

9e-30

140) hrcR
( YP_004849999.1 )

type III secretion system protein

NC_016010
(Xanthomonas axonopodis F1)

9e-30

141) XAC29_02060
( YP_007634905.1 )

type III secretion system protein YscR

NC_020800
(Xanthomonas axonopodis Xac29-1)

9e-30

142) hrcR
( YP_362153.1 )

type III secretion system protein

NC_007508
(Xanthomonas campestris 85-10)

9e-30

143) hrcR
( YP_007648827.1 )

HrcR protein

NC_020815
(Xanthomonas citri Aw12879)

9e-30

144) hrcR
( YP_005630680.1 )

type III secretion protein HrcR

NC_017267
(Xanthomonas oryzae BLS256)

9e-30

145) SG1305
( YP_454985.1 )

type III secretion system protein

NC_007712
(Sodalis glossinidius morsitans)

1e-29

146) NT01EI_0960
( YP_002932408.1 )

type III secretion apparatus protein, YscR/HrcR family, putative

NC_012779
(Edwardsiella ictaluri 93-146)

1e-29

147) ssaR
( YP_008265618.1 )

flagellar biosynthesis protein FliP

NC_021820
(Salmonella enterica 08-1736)

1e-29

148) ssaR
( YP_005237289.1 )

type III secretion system protein

NC_016856
(Salmonella enterica 14028S)

1e-29

149) SEEH1578_16330
( YP_008247325.1 )

type III secretion system protein YscR

NC_021810
(Salmonella enterica 41578)

1e-29

150) yscR
( YP_005396816.1 )

type III secretion protein

NC_017046
(Salmonella enterica 798)

1e-29

151) SSPA1332
( YP_002142171.1 )

type III secretion system protein

NC_011147
(Salmonella enterica AKU12601)

1e-29

152) yscR
( YP_150685.1 )

type III secretion protein

NC_006511
(Salmonella enterica ATCC 9150)

1e-29

153) SU5_02035
( YP_006087669.1 )

Type III secretion inner membrane protein

NC_017623
(Salmonella enterica B182)

1e-29

154) ssaR
( YP_008255384.1 )

flagellar biosynthesis protein FliP

NC_021814
(Salmonella enterica CFSAN001921)

1e-29

155) CFSAN001992_04495
( YP_007470657.1 )

type III secretion system protein YscR

NC_020307
(Salmonella enterica CFSAN001992)

1e-29

156) ssaR
( YP_008260609.1 )

flagellar biosynthesis protein FliP

NC_021818
(Salmonella enterica CFSAN002050)

1e-29

157) ssaR
( YP_008249241.1 )

flagellar biosynthesis protein FliP

NC_021812
(Salmonella enterica CFSAN002069)

1e-29

158) yscR
( NP_456109.1 )

putative type III secretion protein

NC_003198
(Salmonella enterica CT18)

1e-29

159) epaP
( YP_002215713.1 )

type III secretion system protein

NC_011205
(Salmonella enterica CT_02021853)

1e-29

160) epaP
( YP_002114432.1 )

type III secretion system protein

NC_011094
(Salmonella enterica CVM19633)

1e-29

161) STMMW_14241
( YP_005232478.1 )

putative type III secretion protein

NC_016854
(Salmonella enterica D23580)

1e-29

162) ssaR
( NP_460384.1 )

type III secretion system protein

NC_003197
(Salmonella enterica LT2)

1e-29

163) STBHUCCB_13770
( YP_005216935.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

1e-29

164) yscR
( YP_002637868.1 )

type III secretion system protein

NC_012125
(Salmonella enterica RKS4594)

1e-29

165) ssaR
( YP_216427.1 )

type III secretion system protein

NC_006905
(Salmonella enterica SC-B67)

1e-29

166) SPAB_01906
( YP_001588129.1 )

type III secretion system protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-29

167) yscR
( YP_005181263.1 )

putative type III secretion protein

NC_016810
(Salmonella enterica SL1344)

1e-29

168) epaP
( YP_002045422.1 )

type III secretion system protein

NC_011083
(Salmonella enterica SL476)

1e-29

169) ssaR
( YP_005242320.1 )

type III secretion system protein

NC_016857
(Salmonella enterica ST4/74)

1e-29

170) STMDT12_C14350
( YP_005247131.1 )

type III secretion system protein

NC_016860
(Salmonella enterica T000240)

1e-29

171) yscR
( NP_805090.1 )

type III secretion system protein

NC_004631
(Salmonella enterica Ty2)

1e-29

172) TY21A_06540
( YP_007925612.1 )

type III secretion system protein

NC_021176
(Salmonella enterica Ty21a)

1e-29

173) STU288_03415
( YP_007901788.1 )

type III secretion system protein YscR

NC_021151
(Salmonella enterica U288)

1e-29

174) ssaR
( YP_005251923.1 )

type III secretion system protein

NC_016863
(Salmonella enterica UK-1)

1e-29

175) hrcR
( YP_198720.1 )

type III secretion system protein

NC_006834
(Xanthomonas oryzae KACC10331)

9e-30

176) ssaR
( YP_002226666.1 )

type III secretion system protein

NC_011274
(Salmonella enterica 287/91)

2e-29

177) SBOV14161
( YP_008505286.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_022241
(Salmonella enterica 3114)

2e-29

178) ssaR
( YP_008480906.1 )

putative type III secretion protein

NC_022221
(Salmonella enterica CDC1983-67)

2e-29

179) ssaR
( YP_008308803.1 )

flagellar biosynthesis protein FliP

NC_021844
(Salmonella enterica CFSAN000189)

2e-29

180) ssaR
( YP_002243726.1 )

type III secretion system protein

NC_011294
(Salmonella enterica P125109)

2e-29

181) ssaR
( YP_005212444.1 )

putative type III secretion protein

NC_016831
(Salmonella enterica RKS5078)

2e-29

182) ssaR
( YP_008380650.1 )

flagellar biosynthesis protein FliP

NC_021984
(Salmonella enterica S06004)

2e-29

183) epaP
( YP_002040671.1 )

type III secretion system protein

NC_011080
(Salmonella enterica SL254)

2e-29

184) SN31241_24890
( YP_008360405.1 )

Virulence protein yscR

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-29

185) JCM7686_1775
( YP_008404643.1 )

type III secretion protein

NC_022041
(Paracoccus aminophilus JCM 7686)

1e-28

186) ssaR
( YP_002924940.1 )

type III secretion system protein

NC_012751
(Candidatus Hamiltonella defensa T5A)

1e-27

187) CK3_11030
( YP_007823328.1 )

flagellar biosynthetic protein FliP

NC_021035
(butyrate-producing bacterium SS3/4)

4e-26

188) fliP
( YP_006716878.1 )

flagellar biosynthesis protein FliP

NC_007498
(Pelobacter carbinolicus DSM 2380)

3e-25

189) Atc_1493
( YP_004748842.1 )

flagellar biosynthesis protein fliP

NC_015850
(Acidithiobacillus caldus SM-1)

3e-25

190) MYSTI_06240
( YP_007363197.1 )

type III secretion system protein

NC_020126
(Myxococcus stipitatus DSM 14675)

4e-25

191) lfiP
( YP_003363875.1 )

flagellar export/assembly protein

NC_013716
(Citrobacter rodentium ICC168)

5e-25

192) sctR
( NP_297224.1 )

type III secretion inner membrane protein SctR

NC_002620
(Chlamydia muridarum Nigg)

1e-24

193) B595_1074
( YP_006733619.1 )

fliP family protein

NC_018619
(Chlamydia psittaci 84/55)

1e-24

194) B711_1071
( YP_006740016.1 )

fliP family protein

NC_018625
(Chlamydia psittaci CP3)

1e-24

195) B600_1069
( YP_006735770.1 )

fliP family protein

NC_018621
(Chlamydia psittaci VS225)

1e-24

196) fliP
( YP_004846442.1 )

flagellar biosynthetic protein FliP

NC_016002
(Pseudogulbenkiania sp. NH8B)

1e-24

197) Cwoe_0066
( YP_003391877.1 )

flagellar biosynthetic protein FliP

NC_013739
(Conexibacter woesei DSM 14684)

2e-24

198) lfiP
( YP_003232796.1 )

putative lateral flagellar biosynthesis protein

NC_013364
(Escherichia coli 11128)

4e-24

199) fliP
( YP_003227339.1 )

flagellar biosynthesis protein FliP

NC_013361
(Escherichia coli 11368)

4e-24

200) fliP
( YP_001726333.1 )

flagellar biosynthesis protein FliP

NC_010468
(Escherichia coli ATCC 8739)

4e-24

201) EKO11_3667
( YP_005279305.1 )

flagellar biosynthetic protein FliP

NC_016902
(Escherichia coli KO11FL)

4e-24

202) fliP2
( YP_006162587.1 )

flagellar biosynthesis protein FliP

NC_017660
(Escherichia coli KO11FL)

4e-24

203) fliP
( YP_008563399.1 )

flagellar biosynthesis protein FliP

NC_022364
(Escherichia coli LY180)

4e-24

204) lfiP
( YP_006123038.1 )

lateral flagellar export/assembly protein

NC_017635
(Escherichia coli W)

4e-24

205) fliP2
( YP_006171701.1 )

flagellar biosynthesis protein FliP

NC_017664
(Escherichia coli W)

4e-24

206) fliP
( YP_001742352.1 )

flagellar biosynthesis protein FliP

NC_010498
(Escherichia coli SMS-3-5)

4e-24

207) fliP
( YP_005093325.1 )

flagellar biosynthesis protein FliP

NC_016745
(Oceanimonas sp. GK1)

4e-24

208) lfiP
( YP_006094582.1 )

lateral flagellar export/assembly protein (FliP-like)

NC_017626
(Escherichia coli 042)

6e-24

209) fliP
( YP_002411025.1 )

flagellar biosynthesis protein FliP

NC_011751
(Escherichia coli UMN026)

6e-24

210) ENC_28610
( YP_007846393.1 )

flagellar biosynthetic protein FliP

NC_021046
(Enterobacter cloacae NCTC 9394)

6e-24

211) lfiP
( YP_006167277.1 )

Flagellar biosynthetic protein FliP

NC_017663
(Escherichia coli P12b)

8e-24

212) fliP
( NP_623044.1 )

flagellar biosynthesis protein FliP

NC_003869
(Thermoanaerobacter tengcongensis MB4)

9e-24

213) Calkro_0478
( YP_004023197.1 )

flagellar biosynthetic protein flip

NC_014720
(Caldicellulosiruptor kronotskyensis 2002)

1e-23

214) fliP1
( YP_006137309.1 )

Flagellar biosynthesis protein

NC_017644
(Escherichia coli NA114)

2e-23

215) Calhy_0599
( YP_003991709.1 )

flagellar biosynthetic protein flip

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

2e-23

216) Calkr_0422
( YP_004025586.1 )

flagellar biosynthetic protein flip

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

2e-23

217) fliP
( YP_008237688.1 )

Flagellar biosynthesis protein FliP

NC_021745
(Ralstonia solanacearum FQY_4)

2e-23

218) fliP
( NP_521936.1 )

flagellar biosynthesis protein FliP

NC_003296
(Ralstonia solanacearum GMI1000)

2e-23

219) fliP
( YP_006032632.1 )

flagellar biosynthetic protein flip

NC_017575
(Ralstonia solanacearum Po82)

2e-23

220) fliP
( YP_003613775.1 )

Flagellar biosynthetic protein FliP

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-23

221) Calla_1939
( YP_004799490.1 )

flagellar biosynthetic protein FliP

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

2e-23

222) A3UG_14735
( YP_006478375.1 )

Flagellar biosynthetic protein FliP

NC_018079
(Enterobacter cloacae SDM)

2e-23

223) Athe_2157
( YP_002574005.1 )

flagellar biosynthetic protein FliP

NC_012034
(Caldicellulosiruptor bescii DSM 6725)

3e-23

224) fliP
( YP_003749322.1 )

fliP: flagellar biosynthesis protein. fliP/mopC/spaP family

NC_014310
(Ralstonia solanacearum PSI07)

3e-23

225) fliP
( YP_455736.1 )

flagellar biosynthesis protein FliP

NC_007712
(Sodalis glossinidius morsitans)

4e-23

226) NT01EI_2431
( YP_002933836.1 )

flagellar biosynthetic protein FliP, putative

NC_012779
(Edwardsiella ictaluri 93-146)

4e-23

227) fliP
( YP_003041460.1 )

flagellar biosynthetic protein flip precursor

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

4e-23

228) fliP
( NP_929205.1 )

flagellar biosynthesis protein FliP

NC_005126
(Photorhabdus luminescens TTO1)

4e-23

229) ETAC_10205
( YP_007629522.1 )

Flagellar biosynthesis protein FliP

NC_020796
(Edwardsiella tarda C07-087)

4e-23

230) fliP
( YP_003296198.1 )

flagellar biosynthesis pathway protein FliP

NC_013508
(Edwardsiella tarda EIB202)

4e-23

231) fliP
( YP_005699542.1 )

Flagellar biosynthesis protein FliP

NC_017309
(Edwardsiella tarda FL6-60)

4e-23

232) fliP
( YP_001177259.1 )

flagellar biosynthesis protein FliP

NC_009436
(Enterobacter sp. 638)

4e-23

233) COB47_1938
( YP_003841191.1 )

flagellar biosynthetic protein FliP

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

5e-23

234) fliP
( YP_007998982.1 )

flagellar biosynthetic protein FliP

NC_021237
(Pseudomonas fluorescens CHA0)

5e-23

235) fliP
( YP_258777.2 )

flagellar biosynthesis protein FliP

NC_004129
(Pseudomonas protegens Pf-5)

5e-23

236) fliP
( YP_001750532.1 )

flagellar biosynthesis protein FliP

NC_010501
(Pseudomonas putida W619)

6e-23

237) fliP
( YP_001266852.1 )

flagellar biosynthesis protein FliP

NC_009512
(Pseudomonas putida F1)

7e-23

238) YSA_08109
( YP_006388272.1 )

flagellar biosynthesis protein FliP

NC_017986
(Pseudomonas putida ND6)

7e-23

239) fliP
( YP_005929380.1 )

protein FliP

NC_017530
(Pseudomonas putida BIRD-1)

1e-22

240) fliP
( YP_006532961.1 )

flagellar biosynthesis protein FliP

NC_018220
(Pseudomonas putida DOT-T1E)

1e-22

241) fliP
( YP_001670143.1 )

flagellar biosynthesis protein FliP

NC_010322
(Pseudomonas putida GB-1)

1e-22

242) L483_24060
( YP_008096573.1 )

flagellar biosynthesis protein FliP

NC_021491
(Pseudomonas putida H8234)

1e-22

243) fliP
( NP_746469.1 )

flagellar biosynthesis protein FliP

NC_002947
(Pseudomonas putida KT2440)

1e-22

244) fliP
( YP_007230563.1 )

flagellar biosynthesis protein FliP

NC_019905
(Pseudomonas putida PC9)

1e-22

245) PPS_3758
( YP_004703179.1 )

flagellar biosynthesis protein FliP

NC_015733
(Pseudomonas putida S16)

1e-22

246) fliP
( YP_236514.1 )

flagellar biosynthesis protein FliP

NC_007005
(Pseudomonas syringae B728a)

1e-22

247) fliP
( NP_791795.1 )

flagellar biosynthetic protein FliP

NC_004578
(Pseudomonas syringae DC3000)

1e-22

248) fliP
( YP_005801745.1 )

flagellar biosynthetic protein FliP

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-22

249) fliP
( YP_002647972.1 )

flagellar biosynthetic protein FliP

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-22

250) D782_1687
( YP_007339871.1 )

flagellar biosynthetic protein FliP

NC_020063
(Enterobacteriaceae bacterium FGI 57)

1e-22

251) fliP
( YP_002329579.1 )

flagellar biosynthesis protein FliP

NC_011601
(Escherichia coli E2348/69)

1e-22

252) Ser39006_3174
( YP_008523556.1 )

flagellar biosynthetic protein FliP

NC_022268
(Serratia sp. ATCC 39006)

2e-22

253) fliP
( YP_076818.1 )

flagellar biosynthesis protein FliP

NC_006177
(Symbiobacterium thermophilum IAM 14863)

2e-22

254) fliP
( YP_003711940.1 )

flagellar biosynthesis protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-22

255) fliP
( YP_275528.1 )

flagellar biosynthesis protein FliP

NC_005773
(Pseudomonas syringae 1448A)

9e-23

256) fliP
( YP_003539639.1 )

flagellar biosynthetic protein

NC_013971
(Erwinia amylovora ATCC 49946)

2e-22

257) fliP3
( YP_003532039.1 )

flagellar biosynthetic protein FliP

NC_013961
(Erwinia amylovora CFBP1430)

2e-22

258) fliP
( YP_003797940.1 )

flagellar biosynthetic protein FliP

NC_014355
(Candidatus Nitrospira defluvii )

2e-22

259) fliP
( YP_008112455.1 )

flagellar biosynthesis protein FliP

NC_021505
(Pseudomonas putida NBRC 14164)

2e-22

260) fliP
( YP_001458737.1 )

flagellar biosynthesis protein FliP

NC_009800
(Escherichia coli HS)

2e-22

261) fliP
( NP_707833.3 )

flagellar biosynthesis protein

NC_004337
(Shigella flexneri 301)

2e-22

262) fliP
( YP_347281.1 )

flagellar biosynthesis protein FliP

NC_007492
(Pseudomonas fluorescens Pf0-1)

2e-22

263) Dd703_1550
( YP_002987172.1 )

flagellar biosynthetic protein FliP

NC_012880
(Dickeya dadantii Ech703)

3e-22

264) fliP
( YP_005816715.1 )

Flagellar biosynthetic protein FliP

NC_017445
(Erwinia sp. Ejp617)

3e-22

265) fliP
( YP_001399618.1 )

flagellar biosynthesis protein FliP

NC_009708
(Yersinia pseudotuberculosis IP 31758)

3e-22

266) fliP
( YP_006096412.1 )

flagellar biosynthetic protein FliP

NC_017626
(Escherichia coli 042)

3e-22

267) fliP
( YP_003234943.1 )

flagellar biosynthesis protein FliP

NC_013364
(Escherichia coli 11128)

3e-22

268) fliP
( YP_003229814.1 )

flagellar biosynthesis protein FliP

NC_013361
(Escherichia coli 11368)

3e-22

269) fliP
( YP_003222125.1 )

flagellar biosynthesis protein FliP

NC_013353
(Escherichia coli 12009)

3e-22

270) fliP
( YP_006769620.1 )

flagellar biosynthesis protein FliP

NC_018650
(Escherichia coli 2009EL-2050)

3e-22

271) fliP
( YP_006783745.1 )

flagellar biosynthesis protein FliP

NC_018661
(Escherichia coli 2009EL-2071)

3e-22

272) fliP
( YP_006778674.1 )

flagellar biosynthesis protein FliP

NC_018658
(Escherichia coli 2011C-3493)

3e-22

273) fliP
( YP_669784.1 )

flagellar biosynthesis protein FliP

NC_008253
(Escherichia coli 536)

3e-22

274) fliP
( YP_002403220.1 )

flagellar biosynthesis protein FliP

NC_011748
(Escherichia coli 55989)

3e-22

275) fliP
( YP_006106267.1 )

flagellar biosynthetic protein FliP

NC_017631
(Escherichia coli ABU 83972)

3e-22

276) fliP
( YP_007381879.1 )

flagellar biosynthesis protein FliP

NC_020163
(Escherichia coli APEC O78)

3e-22

277) fliP
( YP_001724673.1 )

flagellar biosynthesis protein FliP

NC_010468
(Escherichia coli ATCC 8739)

3e-22

278) fliP
( YP_003499943.1 )

flagellar biosynthetic protein fliP precursor

NC_013941
(Escherichia coli CB9615)

3e-22

279) fliP
( YP_006144296.1 )

flagellar biosynthesis protein

NC_017646
(Escherichia coli CE10)

3e-22

280) fliP
( NP_754257.1 )

flagellar biosynthesis protein FliP

NC_004431
(Escherichia coli CFT073)

3e-22

281) fliP
( YP_006154289.1 )

flagellar biosynthesis protein FliP

NC_017652
(Escherichia coli clone D i14)

3e-22

282) fliP
( YP_006149370.1 )

flagellar biosynthesis protein FliP

NC_017651
(Escherichia coli clone D i2)

3e-22

283) EcDH1_1700
( YP_006091650.1 )

flagellar biosynthetic protein FliP

NC_017625
(Escherichia coli DH1)

3e-22

284) fliP
( YP_006129289.1 )

flagellar biosynthetic protein fliP precursor

NC_017638
(Escherichia coli DH1)

3e-22

285) fliP
( YP_001463250.1 )

flagellar biosynthesis protein FliP

NC_009801
(Escherichia coli E24377A)

3e-22

286) fliP
( YP_002271065.1 )

flagellar biosynthesis protein FliP

NC_011353
(Escherichia coli EC4115)

3e-22

287) fliP
( YP_002398155.1 )

flagellar biosynthesis protein FliP

NC_011745
(Escherichia coli ED1a)

3e-22

288) fliP
( NP_288409.1 )

flagellar biosynthesis protein FliP

NC_002655
(Escherichia coli EDL933)

3e-22

289) fliP
( YP_003035934.1 )

flagellar biosynthesis protein FliP

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

3e-22

290) ETEC_2051
( YP_006115617.1 )

flagellar biosynthetic protein FliP

NC_017633
(Escherichia coli ETEC H10407)

3e-22

291) fliP
( YP_002387441.1 )

flagellar biosynthesis protein FliP

NC_011741
(Escherichia coli IAI1)

3e-22

292) fliP
( YP_002407120.1 )

flagellar biosynthesis protein FliP

NC_011750
(Escherichia coli IAI39)

3e-22

293) fliP
( YP_001730912.1 )

flagellar biosynthesis protein FliP

NC_010473
(Escherichia coli K-12)

3e-22

294) fliP
( YP_002926949.1 )

flagellar biosynthesis protein FliP

NC_012759
(Escherichia coli K-12)

3e-22

295) fliP
( YP_490202.1 )

flagellar biosynthesis protein

NC_007779
(Escherichia coli K-12)

3e-22

296) fliP
( NP_416458.1 )

flagellar biosynthesis protein

NC_000913
(Escherichia coli K12)

3e-22

297) EKO11_1826
( YP_005277507.1 )

flagellar biosynthetic protein FliP

NC_016902
(Escherichia coli KO11FL)

3e-22

298) fliP
( YP_006164919.1 )

flagellar biosynthesis protein FliP

NC_017660
(Escherichia coli KO11FL)

3e-22

299) fliP
( YP_002556821.1 )

flagellar biosynthetic protein fliP

NC_011993
(Escherichia coli LF82)

3e-22

300) fliP
( YP_008565120.1 )

flagellar biosynthesis protein FliP

NC_022364
(Escherichia coli LY180)

3e-22

301) fliP
( YP_006139128.1 )

Flagellar biosynthesis protein

NC_017644
(Escherichia coli NA114)

3e-22

302) fliP
( YP_006120302.1 )

flagellar biosynthesis protein FliP

NC_017634
(Escherichia coli NRG 857C)

3e-22

303) fliP
( YP_006168111.1 )

Flagellar biosynthetic protein FliP precursor

NC_017663
(Escherichia coli P12b)

3e-22

304) fliP
( YP_006159446.1 )

flagellar biosynthesis protein FliP

NC_017656
(Escherichia coli RM12579)

3e-22

305) fliP
( NP_310714.1 )

flagellar biosynthesis protein FliP

NC_002695
(Escherichia coli Sakai)

3e-22

306) fliP
( YP_002293454.1 )

flagellar biosynthesis protein FliP

NC_011415
(Escherichia coli SE11)

3e-22

307) ECSF_1800
( YP_003349790.1 )

flagellar biosynthetic protein FliP

NC_013654
(Escherichia coli SE15)

3e-22

308) fliP
( YP_001743297.1 )

flagellar biosynthesis protein FliP

NC_010498
(Escherichia coli SMS-3-5)

3e-22

309) fliP
( YP_003078435.1 )

flagellar biosynthesis protein FliP

NC_013008
(Escherichia coli TW14359)

3e-22

310) fliP
( YP_002412960.1 )

flagellar biosynthesis protein FliP

NC_011751
(Escherichia coli UMN026)

3e-22

311) fliP
( YP_006124817.1 )

flagellar biosynthesis protein

NC_017635
(Escherichia coli W)

3e-22

312) fliP
( YP_006173528.1 )

flagellar biosynthesis protein FliP

NC_017664
(Escherichia coli W)

3e-22

313) fliP
( YP_006313351.1 )

flagellar biosynthesis protein FliP

NC_017906
(Escherichia coli Xuzhou21)

3e-22

314) fliP
( YP_001879727.1 )

flagellar biosynthesis protein FliP

NC_010658
(Shigella boydii CDC 3083-94)

3e-22

315) fliP
( YP_689437.1 )

flagellar biosynthesis protein FliP

NC_008258
(Shigella flexneri 8401)

3e-22

316) Calow_1847
( YP_004003176.1 )

flagellar biosynthetic protein flip

NC_014657
(Caldicellulosiruptor owensensis OL)

3e-22

317) fliP
( YP_003365583.1 )

flagellar biosynthetic protein FliP

NC_013716
(Citrobacter rodentium ICC168)

3e-22

318) fliP
( YP_002383064.1 )

flagellar biosynthesis protein FliP

NC_011740
(Escherichia fergusonii ATCC 35469)

3e-22

319) fliP
( YP_006579300.1 )

flagellar biosynthesis protein FliP

NC_018405
(Enterobacter cloacae ENHKU01)

4e-22

320) fliP
( YP_853001.1 )

flagellar biosynthesis protein FliP

NC_008563
(Escherichia coli APEC O1)

4e-22

321) fliP
( YP_006101245.1 )

flagellar biosynthetic protein FliP

NC_017628
(Escherichia coli IHE3034)

4e-22

322) fliP
( YP_008571879.1 )

Flagellar biosynthetic protein fliP precursor

NC_022370
(Escherichia coli PMV-1)

4e-22

323) fliP
( YP_002391718.1 )

flagellar biosynthesis protein FliP

NC_011742
(Escherichia coli S88)

4e-22

324) fliP
( YP_006110392.1 )

flagellar biosynthesis protein FliP

NC_017632
(Escherichia coli UM146)

4e-22

325) fliP
( YP_541152.1 )

flagellar biosynthesis protein FliP

NC_007946
(Escherichia coli UTI89)

4e-22

326) fliP
( YP_004593337.1 )

flagellar biosynthesis protein FliP

NC_015663
(Enterobacter aerogenes KCTC 2190)

5e-22

327) fliP
( YP_008138959.1 )

flagellar biosynthetic protein flip

NC_021591
(Serratia odorifera 4Rx13)

5e-22

328) SerAS9_3041
( YP_004506421.1 )

flagellar biosynthetic protein FliP

NC_015567
(Serratia plymuthica AS9)

5e-22

329) fliP
( YP_008159817.1 )

flagellar biosynthesis protein FliP

NC_021659
(Serratia plymuthica S13)

5e-22

330) SerAS12_3042
( YP_004501468.1 )

flagellar biosynthetic protein FliP

NC_015566
(Serratia sp. AS12)

5e-22

331) SerAS13_3044
( YP_006025883.1 )

flagellar biosynthetic protein FliP

NC_017573
(Serratia sp. AS13)

5e-22

332) fliP
( YP_003211028.1 )

flagellar biosynthetic protein fliP

NC_013282
(Cronobacter turicensis z3032)

5e-22

333) ST548_p6298
( YP_007388300.1 )

Flagellar biosynthesis protein FliP

NC_020181
(Enterobacter aerogenes EA1509E)

6e-22

334) fliP
( YP_003883615.1 )

flagellar biosynthesis protein fliP

NC_014500
(Dickeya dadantii 3937)

6e-22

335) fliP
( YP_008266182.1 )

flagellar biosynthesis protein FliP

NC_021820
(Salmonella enterica 08-1736)

6e-22

336) fliP
( YP_005237949.1 )

flagellar biosynthesis protein FliP

NC_016856
(Salmonella enterica 14028S)

6e-22

337) fliP
( YP_005397341.1 )

flagellar biosynthetic protein FliP

NC_017046
(Salmonella enterica 798)

6e-22

338) fliP
( YP_008254817.1 )

flagellar biosynthesis protein FliP

NC_021814
(Salmonella enterica CFSAN001921)

6e-22

339) STMMW_19591
( YP_005232998.1 )

flagellar biosynthetic protein FliP

NC_016854
(Salmonella enterica D23580)

6e-22

340) fliP
( NP_460932.1 )

flagellar biosynthesis protein FliP

NC_003197
(Salmonella enterica LT2)

6e-22

341) fliP
( YP_005181802.1 )

flagellar biosynthetic protein FliP

NC_016810
(Salmonella enterica SL1344)

6e-22

342) fliP
( YP_005242887.1 )

flagellar biosynthesis protein FliP

NC_016857
(Salmonella enterica ST4/74)

6e-22

343) fliP
( YP_005247696.1 )

flagellar biosynthesis protein FliP

NC_016860
(Salmonella enterica T000240)

6e-22

344) fliP
( YP_007902356.1 )

flagellar biosynthesis protein FliP

NC_021151
(Salmonella enterica U288)

6e-22

345) fliP
( YP_005252485.1 )

flagellar biosynthesis protein FliP

NC_016863
(Salmonella enterica UK-1)

6e-22

346) fliP
( YP_002796342.1 )

flagellar biosynthesis protein FliP

NC_012559
(Laribacter hongkongensis HLHK9)

7e-22

347) Dd1591_1566
( YP_003003899.1 )

flagellar biosynthetic protein FliP

NC_012912
(Dickeya zeae Ech1591)

8e-22

348) fliP
( YP_008398277.1 )

flagellar biosynthetic protein

NC_022000
(Proteus mirabilis BB2000)

8e-22

349) fliP
( YP_002151371.1 )

flagellar biosynthetic protein

NC_010554
(Proteus mirabilis HI4320)

8e-22

350) A464_2127
( YP_008322722.1 )

Flagellar biosynthesis protein FliP

NC_021870
(Salmonella bongori N268-08)

8e-22

351) fliP
( YP_004730660.1 )

flagellar biosynthetic protein FliP

NC_015761
(Salmonella bongori NCTC 12419)

8e-22

352) fliP
( YP_008247887.1 )

flagellar biosynthesis protein FliP

NC_021810
(Salmonella enterica 41578)

8e-22

353) SU5_02582
( YP_006088206.1 )

Flagellar biosynthesis protein FliP

NC_017623
(Salmonella enterica B182)

8e-22

354) fliP
( YP_008253121.1 )

flagellar biosynthesis protein FliP

NC_021812
(Salmonella enterica CFSAN002069)

8e-22

355) fliP
( YP_002046030.1 )

flagellar biosynthesis protein FliP

NC_011083
(Salmonella enterica SL476)

8e-22

356) fliP
( YP_007406771.1 )

flagellar biosynthetic protein FliP

NC_020211
(Serratia marcescens WW4)

1e-21

357) fliP
( YP_002226128.1 )

flagellar biosynthesis protein FliP

NC_011274
(Salmonella enterica 287/91)

1e-21

358) fliP
( YP_003742044.1 )

flagellar biosynthesis protein

NC_014306
(Erwinia billingiae Eb661)

9e-22

359) fliP
( YP_008308242.1 )

flagellar biosynthesis protein FliP

NC_021844
(Salmonella enterica CFSAN000189)

9e-22

360) fliP
( YP_001587417.1 )

flagellar biosynthesis protein FliP

NC_010102
(Salmonella enterica SGSC4150; SPB7)

9e-22

361) fliP
( YP_006762434.1 )

flagellar biosynthesis protein, protein export component FliP

NC_018645
(Desulfobacula toluolica Tol2)

1e-21

362) SBOV20391
( YP_008505882.1 )

flagellar biosynthetic protein FliP

NC_022241
(Salmonella enterica 3114)

1e-21

363) fliP
( YP_008481487.1 )

flagellar biosynthetic protein flip precursor

NC_022221
(Salmonella enterica CDC1983-67)

1e-21

364) fliP
( YP_007470075.1 )

flagellar biosynthesis protein FliP

NC_020307
(Salmonella enterica CFSAN001992)

1e-21

365) fliP
( YP_008261244.1 )

flagellar biosynthesis protein FliP

NC_021818
(Salmonella enterica CFSAN002050)

1e-21

366) STY2187
( NP_456540.1 )

flagellar biosynthetic protein FliP

NC_003198
(Salmonella enterica CT18)

1e-21

367) fliP
( YP_002215107.1 )

flagellar biosynthesis protein FliP

NC_011205
(Salmonella enterica CT_02021853)

1e-21

368) fliP
( YP_002115013.1 )

flagellar biosynthesis protein FliP

NC_011094
(Salmonella enterica CVM19633)

1e-21

369) STBHUCCB_9660
( YP_005216542.1 )

Flagellar biosynthetic protein fliP

NC_016832
(Salmonella enterica P-stx-12)

1e-21

370) fliP
( YP_002243159.1 )

flagellar biosynthesis protein FliP

NC_011294
(Salmonella enterica P125109)

1e-21

371) fliP
( YP_002637320.1 )

flagellar biosynthesis protein FliP

NC_012125
(Salmonella enterica RKS4594)

1e-21

372) fliP
( YP_005213029.1 )

flagellar biosynthetic protein flip precursor

NC_016831
(Salmonella enterica RKS5078)

1e-21

373) fliP
( YP_001570011.1 )

flagellar biosynthesis protein FliP

NC_010067
(Salmonella enterica RSK2980)

1e-21

374) fliP
( YP_008381167.1 )

flagellar biosynthesis protein FliP

NC_021984
(Salmonella enterica S06004)

1e-21

375) fliP
( YP_216971.1 )

flagellar biosynthesis protein FliP

NC_006905
(Salmonella enterica SC-B67)

1e-21

376) fliP
( YP_002041244.1 )

flagellar biosynthesis protein FliP

NC_011080
(Salmonella enterica SL254)

1e-21

377) fliP
( YP_002146044.1 )

flagellar biosynthesis protein FliP

NC_011149
(Salmonella enterica SL483)

1e-21

378) fliP
( NP_804727.1 )

flagellar biosynthesis protein FliP

NC_004631
(Salmonella enterica Ty2)

1e-21

379) fliP
( YP_007925244.1 )

flagellar biosynthesis protein FliP

NC_021176
(Salmonella enterica Ty21a)

1e-21

380) SN31241_30780
( YP_008360994.1 )

Flagellar biosynthetic protein fliP

NC_021902
(Salmonella enterica USMARC-S3124.1)

1e-21

381) Dd586_1528
( YP_003333101.1 )

flagellar biosynthetic protein FliP

NC_013592
(Dickeya dadantii Ech586)

1e-21

382) H650_09085
( YP_008107643.1 )

flagellar biosynthesis protein FliP

NC_021500
(Enterobacter sp. R4-368)

1e-21

383) fliP
( YP_786224.1 )

flagellar biosynthesis protein FliP

NC_010645
(Bordetella avium 197N)

2e-21

384) fliP
( YP_008230983.1 )

flagellar biosynthesis protein FliP

NC_021741
(Serratia liquefaciens ATCC 27592)

2e-21

385) M301_1012
( YP_003673973.1 )

flagellar biosynthetic protein FliP

NC_014207
(Methylotenera versatilis 301)

2e-21

386) fliP
( NP_992929.2 )

flagellar biosynthesis protein FliP

NC_005810
(Yersinia pestis 91001)

2e-21

387) fliP
( YP_651108.2 )

flagellar biosynthesis protein FliP

NC_008150
(Yersinia pestis Antiqua)

2e-21

388) fliP
( NP_669792.2 )

flagellar biosynthesis protein FliP

NC_004088
(Yersinia pestis KIM)

2e-21

389) fliP
( YP_648231.2 )

flagellar biosynthesis protein FliP

NC_008149
(Yersinia pestis Nepal516)

2e-21

390) fliP
( YP_070220.2 )

flagellar biosynthesis protein FliP

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-21

391) D781_2730
( YP_007345166.1 )

flagellar biosynthetic protein FliP

NC_020064
(Serratia marcescens FGI94)

3e-21

392) fliP
( YP_574016.1 )

flagellar biosynthesis protein FliP

NC_007963
(Chromohalobacter salexigens DSM 3043)

3e-21

393) Tmar_0992
( YP_004101832.1 )

flagellar biosynthetic protein FliP

NC_014831
(Thermaerobacter marianensis DSM 12885)

3e-21

394) fliP
( YP_001479186.1 )

flagellar biosynthesis protein FliP

NC_009832
(Serratia proteamaculans 568)

4e-21

395) fliP
( YP_453723.1 )

flagellar biosynthesis protein FliP

NC_007712
(Sodalis glossinidius morsitans)

4e-21

396) fliP
( YP_005522991.1 )

flagellar biosynthesis protein FliP

NC_017168
(Yersinia pestis A1122)

6e-21

397) fliP
( YP_002346816.1 )

flagellar biosynthesis protein FliP

NC_003143
(Yersinia pestis CO92)

6e-21

398) fliP
( YP_005504825.1 )

flagellar biosynthesis protein

NC_017154
(Yersinia pestis D106004)

6e-21

399) fliP
( YP_005509013.1 )

flagellar biosynthesis protein

NC_017160
(Yersinia pestis D182038)

6e-21

400) fliP
( YP_005624300.1 )

flagellar biosynthetic protein FliP

NC_017265
(Yersinia pestis Harbin 35)

6e-21

401) fliP
( YP_001162668.1 )

flagellar biosynthesis protein FliP

NC_009381
(Yersinia pestis Pestoides F)

6e-21

402) fliP
( YP_003568075.1 )

flagellar biosynthesis protein

NC_014029
(Yersinia pestis Z176003)

6e-21

403) fliP
( YP_001401271.1 )

flagellar biosynthesis protein FliP

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-21

404) fliP
( YP_001872246.1 )

flagellar biosynthesis protein FliP

NC_010634
(Yersinia pseudotuberculosis PB1/+)

6e-21

405) fliP
( YP_001721132.1 )

flagellar biosynthesis protein FliP

NC_010465
(Yersinia pseudotuberculosis YPIII)

6e-21

406) Pat9b_2399
( YP_004116257.1 )

flagellar biosynthetic protein FliP

NC_014837
(Pantoea sp. At-9b)

5e-21

407) fliP
( YP_002141671.1 )

flagellar biosynthesis protein FliP

NC_011147
(Salmonella enterica AKU12601)

7e-21

408) fliP
( YP_150183.1 )

flagellar biosynthetic protein FliP

NC_006511
(Salmonella enterica ATCC 9150)

7e-21

409) fliP
( YP_002523316.1 )

flagellar biosynthetic protein FliP

NC_011961
(Thermomicrobium roseum DSM 5159)

9e-21

410) fliP
( YP_007955705.1 )

flagellar biosynthesis protein FliP

NC_021191
(Actinoplanes sp. N902-109)

9e-21

411) spaP
( YP_001007698.1 )

surface presentation of antigens protein SpaP

NC_008800
(Yersinia enterocolitica 8081)

9e-21

412) fliP
( YP_005467374.1 )

putative flagellar biosynthesis protein

NC_017093
(Actinoplanes missouriensis 431)

2e-20

413) fliP
( YP_003899437.1 )

flagellar biosynthesis protein FliP

NC_014532
(Halomonas elongata DSM 2581)

2e-20

414) fliP
( YP_004751609.1 )

flagellar biosynthesis protein

NC_015856
(Collimonas fungivorans Ter331)

2e-20

415) fliP
( YP_587429.1 )

flagellar biosynthesis protein FliP

NC_007974
(Cupriavidus metallidurans CH34)

3e-20

416) fliP
( YP_006900779.1 )

flagellar biosynthetic protein FliP

NC_018829
(Bordetella bronchiseptica MO149)

4e-20

417) Sulac_3139
( YP_005258257.1 )

flagellar biosynthetic protein FliP

NC_016884
(Sulfobacillus acidophilus DSM 10332)

3e-20

418) fliP
( YP_004720285.1 )

flagellar biosynthetic protein FliP

NC_015757
(Sulfobacillus acidophilus TPY)

3e-20

419) fliP
( YP_006966480.1 )

flagellar biosynthetic protein FliP

NC_019382
(Bordetella bronchiseptica 253)

4e-20

420) fliP
( NP_889115.1 )

flagellar biosynthesis protein FliP

NC_002927
(Bordetella bronchiseptica RB50)

4e-20

421) fliP
( NP_883792.1 )

flagellar biosynthesis protein FliP

NC_002928
(Bordetella parapertussis 12822)

4e-20

422) fliP
( YP_006625735.1 )

flagellar biosynthetic protein FliP

NC_018518
(Bordetella pertussis 18323)

5e-20

423) fliP
( YP_005589535.1 )

flagellar biosynthesis protein FliP

NC_017223
(Bordetella pertussis CS)

5e-20

424) fliP
( NP_880136.1 )

flagellar biosynthesis protein FliP

NC_002929
(Bordetella pertussis Tohama I)

5e-20

425) PT7_0779
( YP_004415943.1 )

flagellar biosynthesis protein FliP

NC_015458
(Pusillimonas sp. T7-7)

6e-20

426) fliP
( YP_006896312.1 )

flagellar biosynthetic protein FliP

NC_018828
(Bordetella parapertussis Bpp5)

1e-19

427) fliP
( YP_049816.1 )

flagellar biosynthesis protein FliP

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-19

428) Clole_2443
( YP_004309347.1 )

flagellar biosynthetic protein FliP

NC_015275
(Clostridium lentocellum DSM 5427)

2e-19

429) PC1_2585
( YP_003018152.1 )

flagellar biosynthetic protein FliP

NC_012917
(Pectobacterium carotovorum PC1)

2e-19

430) fliP
( YP_003259269.1 )

flagellar biosynthesis protein FliP

NC_013421
(Pectobacterium wasabiae WPP163)

2e-19

431) W5S_1792
( YP_006282755.1 )

Flagellar biosynthetic protein FliP

NC_017845
(Pectobacterium sp. SCC3193)

2e-19

432) fliP
( YP_001361416.1 )

flagellar biosynthesis protein FliP

NC_009664
(Kineococcus radiotolerans SRS30216)

3e-19

433) S70_18345
( YP_006218162.1 )

flagellar biosynthesis protein FliP

NC_017731
(Providencia stuartii MRSN 2154)

3e-19

434) MU9_1792
( YP_007505211.1 )

Flagellar biosynthesis protein FliP

NC_020418
(Morganella morganii KT)

5e-19

435) fliP
( YP_002604938.1 )

protein FliP

NC_012108
(Desulfobacterium autotrophicum HRM2)

6e-19

436) Ethha_2563
( YP_004092787.1 )

flagellar biosynthetic protein FliP

NC_014828
(Ethanoligenens harbinense YUAN-3)

1e-17

437) fliP
( YP_001454444.1 )

flagellar biosynthesis protein FliP

NC_009792
(Citrobacter koseri ATCC BAA-895)

1e-17

438) fliP
( YP_006747081.1 )

flagellar biosynthesis protein FliP

NC_018632
(Alteromonas macleodii ATCC 27126)

2e-17

439) fliP
( YP_006824044.1 )

flagellar biosynthesis protein FliP

NC_018692
(Alteromonas macleodii Black Sea 11)

2e-17

440) fliP
( YP_006798070.1 )

flagellar biosynthesis protein FliP

NC_018678
(Alteromonas macleodii English Channel 673)

2e-17

441) fliP
( YP_006975941.1 )

flagellar biosynthesis protein FliP

NC_019393
(Alteromonas macleodii AltDE1)

3e-17

442) MADE_1005950
( YP_004426330.1 )

flagellar biosynthesis protein FliP

NC_011138
(Alteromonas macleodii Deep ecotype)

3e-17

443) fliP
( YP_008191968.1 )

flagellar biosynthesis protein FliP

NC_021716
(Alteromonas macleodii English Channel 615)

3e-17

444) fliP
( YP_008171083.1 )

flagellar biosynthesis protein FliP

NC_021710
(Alteromonas macleodii Ionian Sea U4)

3e-17

445) fliP
( YP_008195492.1 )

flagellar biosynthesis protein FliP

NC_021717
(Alteromonas macleodii Ionian Sea U7)

3e-17

446) fliP
( YP_008175213.1 )

flagellar biosynthesis protein FliP

NC_021712
(Alteromonas macleodii Ionian Sea U8)

3e-17

447) fliP
( YP_008183049.1 )

flagellar biosynthesis protein FliP

NC_021714
(Alteromonas macleodii Ionian Sea UM4b)

3e-17

448) fliP
( YP_008178996.1 )

flagellar biosynthesis protein FliP

NC_021713
(Alteromonas macleodii Ionian Sea UM7)

3e-17

449) PCC21_026900
( YP_006647346.1 )

flagellar biosynthesis protein FliP

NC_018525
(Pectobacterium carotovorum PCC21)

3e-17

450) fliP
( YP_006801984.1 )

flagellar biosynthesis protein FliP

NC_018679
(Alteromonas macleodii Balearic Sea AD45)

3e-17

451) Celgi_0475
( YP_004599565.1 )

flagellar biosynthetic protein FliP

NC_015671
(Cellvibrio gilvus ATCC 13127)

4e-17

452) Amet_2707
( YP_001320518.1 )

flagellar biosynthetic protein FliP

NC_009633
(Alkaliphilus metalliredigens QYMF)

6e-17

453) GC56T3_2319
( YP_003671866.1 )

flagellar biosynthetic protein FliP

NC_014206
(Geobacillus sp. C56-T3)

1e-16

454) GYMC52_1141
( YP_004131750.1 )

flagellar biosynthetic protein FliP

NC_014915
(Geobacillus sp. Y412MC52)

1e-16

455) fliP
( YP_003253116.1 )

flagellar biosynthesis protein FliP

NC_013411
(Geobacillus sp. Y412MC61)

1e-16

456) GTCCBUS3UF5_14250
( YP_004981838.1 )

flagellar biosynthetic protein FliP

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

1e-16

457) fliP
( YP_005402318.1 )

flagellar biosynthesis protein FliP

NC_017047
(Rahnella aquatilis HX2)

2e-16

458) Rahaq_2499
( YP_004213233.1 )

flagellar biosynthetic protein FliP

NC_015061
(Rahnella sp. Y9602)

2e-16

459) Rahaq2_2559
( YP_005200551.1 )

flagellar biosynthetic protein FliP

NC_016818
(Rahnella aquatilis CIP 78.65)

2e-16

460) Achl_2976
( YP_002489026.1 )

flagellar biosynthetic protein FliP

NC_011886
(Arthrobacter chlorophenolicus A6)

4e-16

461) fliP
( YP_001125208.1 )

flagellar biosynthesis protein FliP

NC_009328
(Geobacillus thermodenitrificans NG80-2)

6e-16

462) Sked_31060
( YP_003315837.1 )

flagellar biosynthetic protein FliP

NC_013521
(Sanguibacter keddieii DSM 10542)

1e-15

463) fliP
( YP_006822033.1 )

flagellar biosynthetic protein

NC_018691
(Alcanivorax dieselolei B5)

1e-15

464) hscR
( YP_003811251.1 )

type III secretory pathway protein

NC_014366
(gamma proteobacterium HdN1)

1e-15

465) fliP
( YP_002898876.1 )

flagellar biosynthesis protein FliP

NC_012695
(Burkholderia pseudomallei MSHR346)

4e-15

466) fliP
( NP_902797.1 )

flagellar biosynthesis protein FliP

NC_005085
(Chromobacterium violaceum ATCC 12472)

6e-15

467) Celf_0690
( YP_004452217.1 )

flagellar biosynthetic protein FliP

NC_015514
(Cellulomonas fimi ATCC 484)

8e-15

468) HydSN_0660
( YP_007647071.1 )

flagellar biosynthetic protein FliP

NC_020814
(Hydrogenobaculum sp. SN)

4e-14

469) HydHO_0645
( YP_007500018.1 )

flagellar biosynthetic protein FliP

NC_020411
(Hydrogenobaculum sp. HO)

4e-14

470) fliP
( YP_741821.1 )

flagellar biosynthesis protein FliP

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

5e-14

471) Desaci_3816
( YP_006468029.1 )

flagellar biosynthetic protein FliP

NC_018068
(Desulfosporosinus acidiphilus SJ4)

5e-14

472) Desor_4879
( YP_004972795.1 )

flagellar biosynthetic protein FliP

NC_016584
(Desulfosporosinus orientis DSM 765)

2e-13

473) fliP
( YP_002121320.1 )

flagellar biosynthesis protein FliP

NC_011126
(Hydrogenobaculum sp. Y04AAS1)

2e-13

474) fliP
( YP_005608752.1 )

flagellar biosynthetic protein

NC_017249
(Bradyrhizobium japonicum USDA 6)

5e-11

475) fliP
( YP_617964.1 )

flagellar biosynthesis protein FliP

NC_008048
(Sphingopyxis alaskensis RB2256)

2e-10

476) Mrad2831_5050
( YP_001757691.1 )

flagellar biosynthetic protein FliP

NC_010505
(Methylobacterium radiotolerans JCM 2831)

6e-09

477) Alvin_2932
( YP_003444867.1 )

flagellar biosynthetic protein FliP

NC_013851
(Allochromatium vinosum DSM 180)

0.037

478) Anae109_0745
( YP_001377942.1 )

type III secretion system protein

NC_009675
(Anaeromyxobacter sp. Fw109-5)

0.27

479) Thivi_0368
( YP_006412562.1 )

flagellar biosynthetic protein FliP

NC_018012
(Thiocystis violascens DSM 198)

0.32

• Sequence Alignments

1) HrcR in NC_007005


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  324 bits (1216),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 206/217 (95%), Positives = 215/217 (99%), Gaps = 0/217 (0%)

Query  1    MIMEGINPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60
            MIM+G NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATMFVMAPVAHDIQQRVHEHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLL  120
            LAATMFVMAPVAHDIQQRVH+HPLEL++ADKLQ+SL+ VIEPLQRFMTRNTDPDVVAHLL
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENTQRMWPKEMADQASKDDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180
            ENTQRMWPKEMADQA+KDDLLLAIPAFV+SELQAGFEIGFLIYIPFIVIDLIVSNLLLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVSPMTlslplklllfvlVSGWSRLLDSLFYSYM  217
            GMQMVSPMT+SLPLKLLLFVLVSGWSRLLDSLFYSYM
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

2) hrcR in NC_005773


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  323 bits (1211),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 205/215 (96%), Positives = 213/215 (99%), Gaps = 0/215 (0%)

Query  1    MEGVNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA  60
            M+G NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA
Sbjct  3    MDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA  62

Query  61   ATMFVMAPVAHEIQQRVHEHPLELGSADKLQSSLKTVIEPLQRFMTRNTDPDVVAHLLEN  120
            ATMFVMAPVAH+IQQRVH+HPLELGSADKLQ+SL+TVIEPLQRFMTRNTDPDVVAHLLEN
Sbjct  63   ATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLEN  122

Query  121  TQRMWPKEMADQANKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM  180
            TQRMWPKEMADQA K+DLLLAIPAFV+SELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM
Sbjct  123  TQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM  182

Query  181  QMVSPMTlslplklllfvlVSGWSRLLDSLFYSYM  215
            QMVSPMT+SLPLKLLLFVLVSGWSRLLDSLFYSYM
Sbjct  183  QMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

3) hrcR in NC_004578


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  296 bits (1109),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 186/200 (93%), Positives = 199/200 (99%), Gaps = 0/200 (0%)

Query  1    MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHEMQQ  60
            +SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH++QQ
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  61   RVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHLLDNTQRMWPKEMADQASK  120
            RVHDHPLELG+++KLQ+S RTVIEPLQRFMTRNTDPDVVAHLL+NTQRMWPKEMADQA+K
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  121  NDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTlslplkll  180
            +DLLLAIPAFV+SELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT+SLPLKLL
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  181  lFVMVSGWSRLLDSLFYSYM  200
            LFV+VSGWSRLLDSLFYSYM
Sbjct  198  LFVLVSGWSRLLDSLFYSYM  217

4) Pmen_0046 in NC_009439


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  293 bits (1097),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 178/217 (83%), Positives = 204/217 (95%), Gaps = 0/217 (0%)

Query  1    MILDGMNPIMLALFLGALSLIPFLLIVCTAFLKIAMTLMITRNAIGVQQVPPNMAIYGIA  60
            MI+DG NPIMLALFLG+LSLIPFLLIVCTAFLKIAMTL+ITRNAIGVQQVPPNMA+YGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATMFVMAPVAYEIQNRLSDNPLDLSSTDSLQASAGNVVEPLQDFMVNNTDPDIATHLL  120
            LAATMFVMAPVA +IQ+R+ D+PL+L+S+D LQ+S   V+EPLQ FM  NTDPD+ +HLL
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENTQRMWPREMSEKASKSDLLLAIPAFVLSELQAAFQIGFLIYIPFIVIDLIISNLLLAL  180
            ENTQRMWP+EM+++A+K DLLLAIPAFV+SELQA+F+IGFLIYIPFIVIDLI+SNLLLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVSPMTISlplklllfvlVDGWTRLLNSLFYSYM  217
            GMQMVSPMTISLPLKLLLFVLV GW+RLL+SLFYSYM
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

5) PSEBR_a5382 in NC_015379


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  263 bits (983),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 154/217 (71%), Positives = 199/217 (92%), Gaps = 0/217 (0%)

Query  1    MSFQGVDPFLLALFIGGISLVPLLLIICSAFLKIAIVLTITRNAIGVQQVPPNMALYAIA  60
            M  +G +P++LALF+G++SL+P+LLI+C+AFLKIA+ L ITRNAIGVQQVPPNMALY+IA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFIMAPVGHNIAEQVKERPLDFSNTEALQGSALNAIKPLQAFMSRNTNPDILAHLL  120
            LAAT+F+MAPV+H+I ++V ++PL++++++ LQ S    I PLQ FM+RNT+PD++AHLL
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENTQRMWPKERAEQASRDDLMLLIPAFMLSELEAGFQMGFLIYIPFIVIDLIVSNLLLAL  180
            ENTQRMWPKE A+QA++DDL+L IPAF++SEL+AGF++GFLIYIPFIVIDLIVSNLLLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPMTISLPLKLLIFVLVQGWTQLLDSLFYSYL  217
            GMQMV+PMTISLPLKLL+FVLV GW++LLDSLFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

6) hrcR in NC_016830


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  262 bits (978),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 153/217 (71%), Positives = 199/217 (92%), Gaps = 0/217 (0%)

Query  1    MSFQGVDPFLLALFIGGISLVPLLLIICSAFLKIAIVLTITRNAIGVQQVPPNMALYAIA  60
            M  +G +P++LALF+G++SL+P+LLI+C+AFLKIA+ L ITRNAIGVQQVPPNMALY+IA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFIMAPVGHNIAEQLKERPLDFSNTEALQGSALNAIKPLQAFMSRNTNPDILAHLL  120
            LAAT+F+MAPV+H+I +++ ++PL++++++ LQ S    I PLQ FM+RNT+PD++AHLL
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENTQRMWPKERAEQASRDDLMLLIPAFMLSELEAGFQMGFLIYIPFIVIDLIVSNLLLAL  180
            ENTQRMWPKE A+QA++DDL+L IPAF++SEL+AGF++GFLIYIPFIVIDLIVSNLLLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPMTISLPLKLLIFVLVQGWTQLLDSLFYSYL  217
            GMQMV+PMTISLPLKLL+FVLV GW++LLDSLFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

7) hrcR in NC_017445


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  254 bits (949),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 154/211 (73%), Positives = 190/211 (91%), Gaps = 0/211 (0%)

Query  7    DPMTFALFLGALSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLF  66
            +P+ +ALFLG+LSLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  67   VMAPVFNQMQQQFSQVPADLSSMDNLKTSVSNGVAPLQKFMTHNTDPDILIHLQENSVRM  126
            VMAPV +++QQ+  + P +L+S D+L+TS+   + PLQ+FMT+NTDPD++ HL EN+ RM
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  127  WPKEMSDSVSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVA  186
            WPKEM+D  +KD+LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  187  PMTLSLPLKMLLFVLINGWTRLLDGLFYSYL  217
            PMT+SLPLK+LLFVL++GW+RLLD+LFYSY+
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

8) hcrR in NC_017390


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  254 bits (949),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 154/211 (73%), Positives = 190/211 (91%), Gaps = 0/211 (0%)

Query  7    DPMTFALFLGALSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLF  66
            +P+ +ALFLG+LSLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  67   VMAPVFNQMQQQFSQVPADLSSMDNLKTSVSNGVAPLQKFMTHNTDPDILIHLQENSVRM  126
            VMAPV +++QQ+  + P +L+S D+L+TS+   + PLQ+FMT+NTDPD++ HL EN+ RM
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  127  WPKEMSDSVSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVA  186
            WPKEM+D  +KD+LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  187  PMTLSLPLKMLLFVLINGWTRLLDGLFYSYL  217
            PMT+SLPLK+LLFVL++GW+RLLD+LFYSY+
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

9) hrcR in NC_012214


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  254 bits (949),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 154/211 (73%), Positives = 190/211 (91%), Gaps = 0/211 (0%)

Query  7    DPMTFALFLGALSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLF  66
            +P+ +ALFLG+LSLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  67   VMAPVFNQMQQQFSQVPADLSSMDNLKTSVSNGVAPLQKFMTHNTDPDILIHLQENSVRM  126
            VMAPV +++QQ+  + P +L+S D+L+TS+   + PLQ+FMT+NTDPD++ HL EN+ RM
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  127  WPKEMSDSVSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVA  186
            WPKEM+D  +KD+LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  187  PMTLSLPLKMLLFVLINGWTRLLDGLFYSYL  217
            PMT+SLPLK+LLFVL++GW+RLLD+LFYSY+
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

10) Ser39006_2919 in NC_022268


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  254 bits (949),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 150/217 (70%), Positives = 191/217 (89%), Gaps = 0/217 (0%)

Query  1    MISGQFDPVMLALFLGALSLIPMMMIVCTCFLKIAMVLIITRNAIGVQQVPPNMALYGIA  60
            MI +  +P+MLALFLG+LSLIP ++IVCT FLKIAM L+ITRNAIGVQQVPPNMALYGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LASTLFIMAPVFNDIRQQFQDTPLDLNSIETLETTLGSGITPLQKFMSRNSDPDILVHLH  120
            LA+T+F+MAPV +DI+Q+ +D PL+L S + L+T+L + I PLQ+FM+RN+DPD++ HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSIRMWPASMSEKVNTQNILLVIPAFVLSELQAGFKIGFLVYIPFIVIDLIVSNVLLAL  180
            EN+ RMWP  M+++   +++LL IPAFV+SELQAGF IGFL+YIPFIVIDLIVSN+LLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPTTlslplklllfilVNGWTRLLDGLFYSYL  217
            GMQMV+P T+SLPLKLLLF+LV+GW+RLLD+LFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

11) hrcR in NC_013971


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  253 bits (946),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 154/211 (73%), Positives = 189/211 (90%), Gaps = 0/211 (0%)

Query  7    DPMTFALFLGALSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLF  66
            +P+ +ALFLG+LSLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  67   VMAPVFNQMQQQFSQVPADLSSMDNLKTSVTNGVAPLQKFMTHNTDPDILIHLQENSVRM  126
            VMAPV +++QQ+  + P +L+S D+L+TS+   + PLQ+FMT+NTDPD++ HL EN+ RM
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  127  WPKEMSDSVNKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVA  186
            WPKEM+D   KD+LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  187  PMTLSLPLKMLLFVLINGWTRLLDGLFYSYL  217
            PMT+SLPLK+LLFVL++GW+RLLD+LFYSY+
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

12) hcrR in NC_013961


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  253 bits (946),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 154/211 (73%), Positives = 189/211 (90%), Gaps = 0/211 (0%)

Query  7    DPMTFALFLGALSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLF  66
            +P+ +ALFLG+LSLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  67   VMAPVFNQMQQQFSQVPADLSSMDNLKTSVTNGVAPLQKFMTHNTDPDILIHLQENSVRM  126
            VMAPV +++QQ+  + P +L+S D+L+TS+   + PLQ+FMT+NTDPD++ HL EN+ RM
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  127  WPKEMSDSVNKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVA  186
            WPKEM+D   KD+LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  187  PMTLSLPLKMLLFVLINGWTRLLDGLFYSYL  217
            PMT+SLPLK+LLFVL++GW+RLLD+LFYSY+
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

13) hrcR in NC_010694


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  253 bits (944),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 153/211 (73%), Positives = 188/211 (90%), Gaps = 0/211 (0%)

Query  7    DPMTFALFLGALSLIPMLMIVCTCFLKISMVLLITRNAIGVQQVPPNMALYGIALAATLF  66
            +P+ +ALFLG+LSLIP L+IVCT FLKI+M LLITRNAIGVQQVPPNMALYGIALAAT+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  67   VMAPVFNQMQQQFSQSPADLSSMDSLKNSVTHGVAPLQKFMTHNTDPDILIHLQENSVRM  126
            VMAPV +++QQ+  + P +L+S D L+ S+   + PLQ+FMT+NTDPD++ HL EN+ RM
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  127  WPKEMSDSVSKDNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLALGMQMVA  186
            WPKEM+D  +KD+LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLALGMQMV+
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  187  PMTLSLPLKMLLFVLINGWTRLLDGLFYSYL  217
            PMT+SLPLK+LLFVL++GW+RLLD+LFYSY+
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

14) hrcR in NC_014500


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  250 bits (935),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 150/217 (70%), Positives = 194/217 (90%), Gaps = 0/217 (0%)

Query  1    MTSGSFDPVMFALFLGALSLIPLMMIVCTCFLKVSMVLMITRNAIGVQQVPPNMALYGIA  60
            M  ++ +P+M+ALFLG+LSLIP+++IVCT FLK++M L+ITRNAIGVQQVPPNMALYGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFVMAPVFSDIKQRFQDAPVDFSSLDALESSVTKGIEPLQKFMSRNTDPDILTHLH  120
            LAAT+FVMAPV  DI+QR +D P++++S D L++S+   IEPLQ+FM+RNTDPD+++HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSLRMWPASMSEKITTQNILLVLPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLAL  180
            EN+ RMWP  M+++ T +++LL +PA+V+SELQAGF IGFLIYIPFIVIDLIVSN+LLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPTTlslplklllfvlVNGWTRLLDGLFYSYL  217
            GMQMV+P T+SLPLKLLLFVLV+GW+RLLD+LFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

15) hrcR in NC_004547


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  250 bits (935),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 151/217 (70%), Positives = 190/217 (88%), Gaps = 0/217 (0%)

Query  1    MTSGAFDPLMFALFLGALSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIA  60
            M  ++ +P+M+ALFLG+LSLIP+++IVCT FLKIA+ LLITRNAIGVQQVPPNMALYGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATMFVMAPVFQDISKRVQEKPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLH  120
            LAATMFVMAPV +DI +RV++ PL++     LQ+S+   +EPLQ FM+RN DPD+++HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSLQMWPASLSEKVNTQNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLAL  180
            EN+ +MWP  ++++   ++LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPMTlslplklllfvlVNGWTRLLDGLFYSYL  217
            GMQMV+PMT+SLPLKLLLFVLV+GW+RLLD+LFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

16) PC1_2212 in NC_012917


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  249 bits (931),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 150/217 (70%), Positives = 190/217 (88%), Gaps = 0/217 (0%)

Query  1    MTSGAFDPLMFALFLGALSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIA  60
            M  ++ +P+M+ALFLG+LSLIP+++IVCT FLKIA+ LLITRNAIGVQQVPPNMALYGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFVMAPVFQDISKRVQEKPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLH  120
            LAAT+FVMAPV +DI +RV++ PL++     LQ+S+   +EPLQ FM+RN DPD+++HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSLQMWPASLSEKVNTQNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLAL  180
            EN+ +MWP  ++++   ++LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPMTlslplklllfvlVNGWTRLLDGLFYSYL  217
            GMQMV+PMT+SLPLKLLLFVLV+GW+RLLD+LFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

17) PCC21_022910 in NC_018525


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  249 bits (931),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 150/217 (70%), Positives = 190/217 (88%), Gaps = 0/217 (0%)

Query  1    MTSGAFDPLMFALFLGALSLIPLMMIVCTCFLKIAIVLLITRNAIGVQQVPPNMALYGIA  60
            M  ++ +P+M+ALFLG+LSLIP+++IVCT FLKIA+ LLITRNAIGVQQVPPNMALYGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFVMAPVFQDISKRVQEKPLDMTDITSLQASVTYGLEPLQTFMSRNVDPDILTHLH  120
            LAAT+FVMAPV +DI +RV++ PL++     LQ+S+   +EPLQ FM+RN DPD+++HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSLQMWPASLSEKVNTQNLLLVIPAFVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLAL  180
            EN+ +MWP  ++++   ++LLL IPAFV+SELQAGF IGFLIYIPFIVIDLIVSN+LLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPMTlslplklllfvlVNGWTRLLDGLFYSYL  217
            GMQMV+PMT+SLPLKLLLFVLV+GW+RLLD+LFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

18) Dd1591_1885 in NC_012912


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  248 bits (925),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 150/217 (70%), Positives = 192/217 (89%), Gaps = 0/217 (0%)

Query  1    MTSGSFDPVMFALFLGTLSLIPLSMIVCTCFLKISMVLMITRNAIGVQQVPPNMALYGIA  60
            M  ++ +P+M+ALFLG+LSLIP+ +IVCT FLKI+M L+ITRNAIGVQQVPPNMALYGIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATVFVMAPVFSDIKQRFQDAPVDFSNLDALESSVTRGIEPLQKFMSRNTDPDILTHLH  120
            LAAT+FVMAPV  DI+QR +D P+++++ D L++S+   IEPLQ+FM+RNTDPD+++HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSLRMWPAAMSEKITTQSILLIVPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLAL  180
            EN+ RMWP  M+++ T + +LL +PA+V+SELQAGF IGFLIYIPFIVIDLIVSN+LLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPTTlslplklllfvlVNGWTRLLDGLFYSYL  217
            GMQMV+P T+SLPLKLLLFVLV+GW+RLLD+LFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

19) D781_3938 in NC_020064


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  245 bits (913),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 149/214 (70%), Positives = 187/214 (88%), Gaps = 0/214 (0%)

Query  4    QSLNPMMLALFLGALSLVPMLMIVCTCFLKISMVLLLTRNAMGVQQVPPNMALYGIALAA  63
            ++ NP+MLALFLG+LSL+P L+IVCT FLKI+M LL+TRNA+GVQQVPPNMALYGIALAA
Sbjct  4    DGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAA  63

Query  64   TLFVMAPVFNDMSQRLKAMPLDFSNMERLEYTFGNGAEPLKAFMTRNTDPDILTHLQENG  123
            T+FVMAPV +D+ QR+   PL++++ ++L+ ++    EPL+ FMTRNTDPD+++HL EN 
Sbjct  64   TMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENT  123

Query  124  ARMWPKEMAQSLTPQSPLLVIPAFVLSELQNGFKIGFLIFIPFLVMDLIVSNVLLALGMQ  183
             RMWPKEMA+  T +  LL IPAFV+SELQ GF IGFLI+IPF+V+DLIVSN+LLALGMQ
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  184  MVSPMTVSLPLKILLFVLVSGWTRLLDGLFYSYL  217
            MVSPMT+SLPLK+LLFVLVSGW+RLLD+LFYSY+
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

20) rscR in NC_017911


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  245 bits (916),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 149/217 (69%), Positives = 188/217 (87%), Gaps = 0/217 (0%)

Query  1    MILQGLDPVVLAVFLGALSLMPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIA  60
            MI++G +P++LA+FLG+LSL+P LL+VCTAFLKI + L+ITRNAIGVQQVPP+MA+ GIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFIMAPVGYEIAENLKASPLDMTNVQTFLSTGNEAINPLRAFMLRNVDPDVLTHLL  120
            LAAT+F+MAPV+ +I + +   PL++ + + + ++    I+PL+ FM RN DPDV++HLL
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENTARLWPAKMAQEVQREDLILLIPAFVLSQLQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180
            ENT R+WP  MA++  ++DL+L IPAFV+S+LQAGFEIGFLIYIPFIVIDLIVSNLLLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVSPMTISlplklllfvlVSGWSRLLDSLFLSYL  217
            GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLF SY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

21) Dd586_1882 in NC_013592


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  244 bits (911),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 149/217 (69%), Positives = 191/217 (89%), Gaps = 0/217 (0%)

Query  1    MTSGNFDPVMFALFLGSLSLIPLAMIVCTCFLKISMVLMLTRNAIGVQQVPPNMALYGVA  60
            M  +  +P+M+ALFLGSLSLIP+ +IVCT FLKI+M L++TRNAIGVQQVPPNMALYG+A
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFVMAPVFSDIKLRFQDAPVDFSSLDALESSVTRGIEPLQKFMSRNTDPDILTHLH  120
            LAAT+FVMAPV  DI+ R +D P++++S D L++S+   IEPLQ+FM+RNTDPD+++HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSLRMWPAAMTEKITTQNILLILPAYVLSELQAGFKIGFLIYIPFIVIDLIVSNVLLAL  180
            EN+ RMWP  M+++ T +++LL +PA+V+SELQAGF IGFLIYIPFIVIDLIVSN+LLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVAPTTlslplklllfvlVNGWTRLLDGLFYSYL  217
            GMQMV+P T+SLPLKLLLFVLV+GW+RLLD+LFYSY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

22) H045_00190 in NC_020209


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  243 bits (907),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 150/217 (70%), Positives = 190/217 (88%), Gaps = 0/217 (0%)

Query  1    MMFQGVDPVVLALFFGAMSLLPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIA  60
            M+ +G +P++LALF+G++SL+P LL+VCTAFLKI + L+ITRNAIGVQQVPP+MA+ GIA
Sbjct  1    MIMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LAATLFVMAPVGYQIAENLKTSPLDMSNVQTLQATGLVAIQPLRTFMTRNTDPDVLTHLQ  120
            LAAT+FVMAPV+ +I + +   PL++++ + LQ++    I+PL+ FMTRNTDPDV++HL 
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  ENSARMWPPEMAQSTQREDWVLLIPAFVVSQLQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180
            EN+ RMWP EMA+ + ++D +L IPAFV+S+LQAGFEIGFLIYIPFIVIDLIVSNLLLAL
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMQMVSPMTISLPLKLLLFVMVSGWSRLLDSLFLSYL  217
            GMQMVSPMTISLPLKLLLFV+VSGWSRLLDSLF SY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

23) Marme_1071 in NC_015276


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  234 bits (874),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 137/196 (70%), Positives = 176/196 (90%), Gaps = 0/196 (0%)

Query  22   PIMLIVCSAFLKISMVLMITRNAMGVQQVPPNMAIYGIALAATMFVMAPVFSDIGNKVKE  81
            P++LIVC+AFLKI+M L+ITRNA+GVQQVPPNMA+YGIALAATMFVMAPV  DI ++V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  82   TPPDFSSLEGMQTSANKIVGPLQAFMSRNSNPDVTTHMMDNTARLWPKEMASKVTKDDLM  141
             P +++S + +QTS   ++ PLQ FM+RN++PDV +H+++NT R+WPKEMA + TKDDL+
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  142  IVIPSFMLSELKAGLQIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKILLFVL  201
            + IP+F++SEL+AG++IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLK+LLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  202  VDGWGRLLDGLFYTYI  217
            V GW+RLLD+LFY+Y+
Sbjct  202  VSGWSRLLDSLFYSYM  217

24) rscR in NC_012660


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  226 bits (841),  Expect = 7e-61, Method: Compositional matrix adjust.
 Identities = 138/197 (71%), Positives = 169/197 (86%), Gaps = 0/197 (0%)

Query  21   MPMLLVVCTAFLKIVIVLMITRNAIGVQQVPPSMAINGIALATTLFIMAPVGYEIAESVK  80
            +P LL+VCTAFLKI + L+ITRNAIGVQQVPP+MA+ GIALA+T+F+MAPV+ +I + V 
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  81   ALPLDLSNVQTLLQTANEAIKPLRAFMLRNIDPDVLTHLLENTARLWPAQMAQEVQREDL  140
              PL+L++ + L  +    I PL+ FM RN DPDV++HLLENT R+WP +MA++  ++DL
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  141  ILLIPAFVLSQLQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200
            +L IPAFV+S+LQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  201  MVSGWSRLLDSLFLSYL  217
            +VSGWSRLLDSLF SY+
Sbjct  201  LVSGWSRLLDSLFYSYM  217

25) H650_14845 in NC_021500


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  181 bits (670),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 105/193 (55%), Positives = 152/193 (79%), Gaps = 0/193 (0%)

Query  25   MIISTSFLKISVVLLIVRNALGIQQVPGNMVIYSISLAATLFIMGPVFNDMTQRVRQISP  84
            +I+ T+FLKI++ LLI RNA+G+QQVP NM +Y+I+LAAT+F+M+PV +D+ QRV++ + 
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  85   DKIDVAAIYAHYPTVIAPLQNFLQRNIDADTHVRLTEAAKKLWKDQANNPITRDNPALIL  144
            +      + +   TVI PLQ F+ RN D+D   +L E ++++W  +  +  T+D+  L +
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  145  SAFVLSELQSGFKIGFLIYIPFLVIDLVVSTVLMALGMQMVAPMFIAIPLKLLLFVLIEG  204
            +AFV+SELQ+GF IGFLIYIPF+VIDL+VS +L+ALGMQMV+PM I++PLKLLLFVL+ G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  205  WSRLLEGLFYSYI  217
            WSRLL++LFYSY+
Sbjct  205  WSRLLDSLFYSYM  217

26) yscR in NC_007645


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  168 bits (621),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 97/199 (49%), Positives = 156/199 (79%), Gaps = 0/199 (0%)

Query  16   LSLIPFIAIMTTSFIKLAVVFSLLRNALGIQQIPPNMALYGLAIVLSIYIMAPVGYQIAD  75
            LSLIPF+ I+ T+F+K+A+ + + RNA+G+QQ+PPNMALYG+A+  ++++MAPV+ +I +
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  76   TVKEKGFDLSQSESLKELANSAIDPMSEFLTKHSSEKERGFFLESAETLWPKEYAARLDT  135
             V +  ++L+ ++ L+    + I+P+  F+T+++     + +LE+++ +WPKE A +   
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  136  NSMLVLVPSFTISELKSAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfkll  195
            + +L+ +P+F +SEL+++FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLL
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  196  lfvllDGWTRLTHGLVLSY  214
            LFVL+ GW+RL ++L  SY
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

27) hrcR in NC_014323


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  161 bits (596),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 99/192 (52%), Positives = 148/192 (78%), Gaps = 3/192 (1%)

Query  29   TSFLKISLVLLVLRNAIGVQQVPPTLAIYGIALALSVFIMAPTVQEVGKRAMAVDVSHPA  88
            T+FLKI++ LL+ RNAIGVQQVPP +A+YGIALA ++F+MAP  +++ +R     +   +
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  89   ASRTVPILERAQDAFDPLRKFMLKMSHAEQREMFLASAKKLWPKEAAKDAQPTDALILIP  148
            A +    L   +  ++PL++FM + ++++    +L +++++WPKE A +A   D L+ IP
Sbjct  89   ADKLQTSL---RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  149  AFVVSELQTGYEIGFLIYIPFVVIDLLISNLLMALGMQQVSPQTITIPLKLLLFTLVGGW  208
            AFV+SELQ+G+EIGFLIYIPF+VIDL++SNLL+ALGMQ VSP TI++PLKLLLF LV+GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  209  AKLLNALAMSYV  220
            ++LL++L  SY+
Sbjct  206  SRLLDSLFYSYM  217

28) HCH_03263 in NC_007645


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  157 bits (580),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 99/211 (47%), Positives = 157/211 (75%), Gaps = 0/211 (0%)

Query  4    PDPFYLTLGLAGIALIPFFAVMATSFVKIAVVLGLLRNALGIQQIPPNMALYGLAIILTA  63
             +P+ L+L L++++LIPF+ ++ T+F+KIA+ L + RNA+G+QQ+PPNMALYG+A+  T 
Sbjct  6    TNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATM  65

Query  64   YIMAPVGISAYNELSTKPISLENTQELKALMDTASQPYKEFLQRHGSEDEQTFFHETAAE  123
            ++MAPV+    + +   P+ L +++ L++ + T  +P + F+ R+   D  + + E +  
Sbjct  66   FVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  124  IWPEDVAKGLEKDSFFVLIPAFTASELTSAFEIGFLIYLPFLAIDLIISNILLAMGMMMV  183
            +WP ++A    KD +++ IPAF  SEL ++FEIGFLIY+PF+ IDLI+SN+LLA+GM MV
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  184  SPMTISLPFKLLLFVLMDGWTRLIHGLVLAY  214
            SPMTISLP+KLLLFVL+ GW+RL+++L  +Y
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

29) yscR in NC_015717


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  154 bits (568),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 98/195 (51%), Positives = 146/195 (75%), Gaps = 0/195 (0%)

Query  27   PFIAIMATTYVKLVVVLGLVRNALGVQNVPPNMALNGIAIILTVYIMAPVAIASYQAVRD  86
            PF+ I+ T+++K+ + L + RNA+GVQ+VPPNMAL GIA+  T+++MAPVA    Q V+D
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  87   RPVDTRNMESLADIARDGAKPFLHFLERNTTPADRAFFVDTTHRLWPKDQADSVTDHDIL  146
            +P++  + + L    R    P+ +F+ RNT P   A +++ T+R+WPK+ AD  T +D+L
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  147  VLVPAFTTAELTKAFKAGFLLFLPFIVIDLIVSNILLAMGMMMVSPMTISLPFKLFLFVI  206
            + +PAF  +EL  +F  GFL+++PFIVIDLIVSN+LLA+GM MVSPMTISLP+KL+LFV+
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  207  VNGWQKLIQGLVLSY  221
            V+GW +L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

30) ascR in NC_009350


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 94/195 (49%), Positives = 148/195 (76%), Gaps = 0/195 (0%)

Query  21   PFIAVMATSFVKLAVVFSLLRNALGVQQIPPNMAMYGLAIILSIYVMAPVGFATQDYLRQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ +++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   NEVSLAKSESVEKFLDEGIAPYRDFLKKQIKPREHAFFIDSTKQLWPSKYADRLEPDSLL  140
            + + L+ ++ ++  L   I P + F+ ++  P   A ++++T+++WP   AD+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  ILLPAFTVSELSRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvl  200
            + +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWARLTHGLVISY  215
            + GW+RL ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

31) pscR in NC_017548


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  152 bits (559),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 92/196 (47%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+ +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D L
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  llDGWARLTHGLVISY  215
            L+ GW+RL ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

32) pscR in NC_017549


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  152 bits (559),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 92/196 (47%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+ +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D L
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  llDGWARLTHGLVISY  215
            L+ GW+RL ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

33) pscR in NC_002516


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  152 bits (559),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 92/196 (47%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+ +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D L
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  llDGWARLTHGLVISY  215
            L+ GW+RL ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

34) ssaR in NC_021577


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  152 bits (559),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 92/196 (47%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+ +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D L
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  llDGWARLTHGLVISY  215
            L+ GW+RL ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

35) pscR in NC_008463


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  152 bits (559),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 92/196 (47%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+ +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D L
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  llDGWARLTHGLVISY  215
            L+ GW+RL ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

36) epaP in NC_021173


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 96/215 (45%), Positives = 157/215 (74%), Gaps = 2/215 (0%)

Query  3    VLDQPVQLIVVLF--ALSILPLLMVLGSSFLKLAVVFALLRNALGTQQIPPNIALYGLAL  60
            ++D    +++ LF  +LS++P+L+++ ++FLK+A+ + + RNA+G QQ+PPN+ALYG+AL
Sbjct  2    IMDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIAL  61

Query  61   VLTLFIMAPVGLAIQDNLAEHPVQLDDKQFTQQVETTILAPYRDFLARNTARAQVRFFAD  120
              T+F+MAPV+  IQ+ + +HP++L+  +  Q    T++ P + F++RNT    V  + +
Sbjct  62   AATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLE  121

Query  121  IGHRTWPEPYRNRIPDDSLIVLIPAFAISQLIEAFKIGLLLFLPFVAIDLIVSNVLLAMG  180
              +R WP    ++   D L++ IPAF +S+L  +F IG+L+++PF+ IDLIVSN+LLA+G
Sbjct  122  NTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALG  181

Query  181  MMMVSPMTIALPLKLLVFVLINGWEKLLGQLVLSF  215
            M MVSPMTI+LPLKLL+FVL++GW +LL+ L  S+
Sbjct  182  MQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

37) G655_16715 in NC_020912


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  151 bits (556),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 92/196 (47%), Positives = 149/196 (77%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L+ +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D L
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  llDGWARLTHGLVISY  215
            L+ GW+RL ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

38) PADK2_17235 in NC_018080


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 92/196 (47%), Positives = 148/196 (76%), Gaps = 0/196 (0%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PF+ ++ T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ ++
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  80   NHDVSLNDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSL  139
            +H + L  +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D L
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfv  199
            L+ +PAF +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  llDGWARLTHGLVISY  215
            L+ GW+RL ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

39) C770_GR4pC1264 in NC_019848


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  150 bits (553),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 93/213 (44%), Positives = 156/213 (74%), Gaps = 0/213 (0%)

Query  3    ETTNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALIL  62
            + TN I + +++++++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  
Sbjct  4    DGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAA  63

Query  63   TVYVTTPLVGEMYRTLSSEPVDVQSIDSMMRAADSLRVPLQTHLKRYTDENERQFFMQAT  122
            T++V +P+  ++ + +  +P+++ S D +  +  ++  PLQ  + R TD +    +++ T
Sbjct  64   TMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENT  123

Query  123  ERIWSEEARAEVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMM  182
            +R+W+ E   +   D LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  183  MVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  215
            MVSP  IS+PLK++LFV V+GWSRL+++L+ SY
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

40) escR in NC_005085


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 91/200 (46%), Positives = 151/200 (76%), Gaps = 0/200 (0%)

Query  16   ALSILPLLVVLGTSFLKLAVVFALLRNALGIQQIPPNIALYGLALILTLFIMAPIGLEIQ  75
            +LS++P+L+++ T+FLK+A+ + + RNA+G+QQ+PPN+ALYG+AL  T+F+MAP++ +IQ
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   DNLIAHPIKIESPAFIQQVESGVFTPYRVFLERNTAPEQVHFFADIGHQIWPEKYQQRIP  135
            + +  HP+ + S+  +Q     V+ P + F+ RNT P+ V  + +  +++WP    ++  
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  136  DNSLLVLMPAFTVSQLIEAFKIGLLLFLPFVAIDLVVSNVLLAMGMMMVSPMTISMPLKL  195
             + LL+ +PAF +S+L  +F IG+L+++PF+ IDL+VSN+LLA+GM MVSPMTIS+PLKL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  196  LVFVLMNGWEKLLGQLVLSF  215
            L+FVL++GW +LL+ L  S+
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

41) bscR in NC_019382


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  148 bits (546),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 145/198 (74%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L  V   + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

42) bscR in NC_002927


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  148 bits (546),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 145/198 (74%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L  V   + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

43) bscR in NC_002928


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  148 bits (546),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 145/198 (74%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L  V   + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

44) bscR in NC_018828


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  148 bits (546),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 145/198 (74%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L  V   + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

45) rhcR in NC_012586


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 94/213 (45%), Positives = 153/213 (72%), Gaps = 0/213 (0%)

Query  4    TTTNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALIL  63
              TN I + +++++++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  
Sbjct  4    DGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAA  63

Query  64   TVYVTTPLVGEMYRTLSSEQVDMQSMDSMVRAANQLRAPLQAHLTRYTDENERQFFLQAT  123
            T++V +P+  ++ + +  + +++ S D +  +   +  PLQ  +TR TD +    +L+ T
Sbjct  64   TMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENT  123

Query  124  ERIWSEEARASVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMM  183
            +R+W+ E       D LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  184  MVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  216
            MVSP  IS+PLK++LFV V+GWSRL+++L+ SY
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

46) SFHH103_04957 in NC_016815


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 94/213 (45%), Positives = 153/213 (72%), Gaps = 0/213 (0%)

Query  4    TTTNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALIL  63
              TN I + +++++++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  
Sbjct  4    DGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAA  63

Query  64   TVYVTTPLVGEMYRTLSSEQVDMQSMDSMMRAANQLRAPLQAHLTRYTDENERQFFLQAT  123
            T++V +P+  ++ + +  + +++ S D +  +   +  PLQ  +TR TD +    +L+ T
Sbjct  64   TMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENT  123

Query  124  ERIWSEEARASVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMM  183
            +R+W+ E       D LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  184  MVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  216
            MVSP  IS+PLK++LFV V+GWSRL+++L+ SY
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

47) bscR in NC_018829


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 98/198 (50%), Positives = 144/198 (73%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L      + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

48) bscR in NC_018518


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 98/198 (50%), Positives = 144/198 (73%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L      + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

49) bscR in NC_017223


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 98/198 (50%), Positives = 144/198 (73%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L      + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

50) bscR in NC_002929


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 98/198 (50%), Positives = 144/198 (73%), Gaps = 8/198 (4%)

Query  25   MTTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VMAPV H I   V+    + 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   GESGTAAPMALDAVLGVAERGVGPLRAFMLRNSQPAQRDFFLRTARHLWGEEASRDLSED  144
            G ++      L++ L      + PL+ FM RN++P     +L  ++++W  E + + + D
Sbjct  87   GSADK-----LQTSLRTV---IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  145  NLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISMPLKLFL  204
            +LL+  PAF++SEL A+F++GFL+Y+PFI+IDLIVSN+LLA+GM MVSP+TIS+PLKL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  205  FVMVDGWTRLIQGLVLSY  222
            FV+V GW+RL+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

51) yscR in NC_008791


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

52) YE105_P0026 in NC_015475


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

53) Y11_p0741 in NC_017565


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

54) yscR in NC_010157


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

55) YPA_CD0018 in NC_008122


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

56) yscR in NC_005813


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

57) yscR in NC_003131


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

58) yscR in NC_017153


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

59) yscR in NC_017157


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

60) YPDSF_3973 in NC_009377


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

61) yscR in NC_014017


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

62) pYV0071 in NC_006153


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

63) YPTS_4289 in NC_010635


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 88/191 (47%), Positives = 148/191 (78%), Gaps = 0/191 (0%)

Query  25   VMATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVS  84
            ++ T+F+K+A+ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   Q+ ++ + + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   LTNIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYADRLESDSLFILLP  144
            L + + ++  +   + P + F+ ++ +++  + ++++T+++WPK+ AD+   D L++ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFLIY+PFIVIDL++SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

64) Sbal195_2278 in NC_009997


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 92/206 (45%), Positives = 149/206 (73%), Gaps = 0/206 (0%)

Query  6    HPIQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLF  65
            +PI L + L  LSL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  66   TMAPVGMAINDNLKATPIVFDAPNVFEQINTEAIAPYRAFLEKNTSNTQIEFFANIGHKV  125
             MAPV+  I++ +   P+ +++++ ++      I P + F+ +NT    +  + +  +++
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  126  WPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVS  185
            WP    +  TKD LL+ +PAF MS+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVS
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  186  PMTIALPFKLLIFILMGGWEKLISQL  211
            PMTI+LP+KLL+F+L++GW +L+  L
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSL  212

65) Sbal678_2288 in NC_016901


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 92/206 (45%), Positives = 149/206 (73%), Gaps = 0/206 (0%)

Query  6    HPIQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLF  65
            +PI L + L  LSL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  66   TMAPVGMAINDNLKATPIVFDAPNVFEQINTEAIAPYRAFLEKNTSNTQIEFFANIGHKV  125
             MAPV+  I++ +   P+ +++++ ++      I P + F+ +NT    +  + +  +++
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  126  WPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVS  185
            WP    +  TKD LL+ +PAF MS+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVS
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  186  PMTIALPFKLLIFILMGGWEKLISQL  211
            PMTI+LP+KLL+F+L++GW +L+  L
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSL  212

66) SVI_2230 in NC_014012


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (541),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 93/210 (45%), Positives = 154/210 (74%), Gaps = 0/210 (0%)

Query  6    NPVQLIILLFCLSILPLFAVMGTSFLKLSIVLSMLRNALGIQQIPPNMAIYGLSLILTLF  65
            NP+ L ++L  LS++P++ ++ T+FLK+++ L + RNA+G+QQ+PPNMA+YG++L  T+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  66   IMAPIGMEINDNLKVHPIVFDSANIIEQVNTLAIIPYRDFLEKNTSKTQLDFFANIGHKT  125
            +MAP++ +I++ +  HP+ ++SA+ ++      I P + F+ +NT    +  + +  ++ 
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  126  WPDKYQDVLSKDSLFVMLPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVS  185
            WP    D  +KD L++ +PAF MS+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVS
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  186  PMTISLPFKLLIFILMGGWEKLVSQLMVSF  215
            PMTISLP+KLL+F+L++GW +L+  L  S+
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

67) USDA257_c21640 in NC_018000


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 94/213 (45%), Positives = 153/213 (72%), Gaps = 0/213 (0%)

Query  4    TTTNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALIL  63
              TN I + +++++++LIP+ ++  T+FLKI++ L++ RNA+G+QQ PPN+ LYG+AL  
Sbjct  4    DGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAA  63

Query  64   TVYVTTPLVGEMYRTLSSEQVDVQSMDSMVRAADQLRAPLQAHLTRYTDENERQFFLQAT  123
            T++V +P+  ++ + +  + +++ S D +  +   +  PLQ  +TR TD +    +L+ T
Sbjct  64   TMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENT  123

Query  124  ERIWSEEARASVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMGMM  183
            +R+W+ E       D LL+ +PAFV SEL  +FEIGFL+Y+PF+VIDLIVS +L+A+GM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  184  MVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  216
            MVSP  IS+PLK++LFV V+GWSRL+++L+ SY
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

68) Sbal175_2391 in NC_017571


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  146 bits (539),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 91/206 (45%), Positives = 149/206 (73%), Gaps = 0/206 (0%)

Query  6    HPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLF  65
            +P+ L + L  LSL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  66   TMAPVGMAINDNLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKV  125
             MAPV+  I++ +   P+ +++++ ++      I P + F+ +NT    +  + +  +++
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  126  WPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVS  185
            WP    +  TKD LL+ +PAF MS+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVS
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  186  PMTIALPFKLLIFILMGGWEKLISQL  211
            PMTI+LP+KLL+F+L++GW +L+  L
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSL  212

69) Sbal117_2090 in NC_017579


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  146 bits (539),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 91/206 (45%), Positives = 149/206 (73%), Gaps = 0/206 (0%)

Query  6    HPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLF  65
            +P+ L + L  LSL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  66   TMAPVGMAINDNLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKV  125
             MAPV+  I++ +   P+ +++++ ++      I P + F+ +NT    +  + +  +++
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  126  WPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVS  185
            WP    +  TKD LL+ +PAF MS+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVS
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  186  PMTIALPFKLLIFILMGGWEKLISQL  211
            PMTI+LP+KLL+F+L++GW +L+  L
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSL  212

70) Sbal_1974 in NC_009052


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  146 bits (539),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 91/206 (45%), Positives = 149/206 (73%), Gaps = 0/206 (0%)

Query  6    HPVQLIIMLFCLSLLPLFAVMGTSFLKLAIVFSMLRNALGIQQIPPNMAIYGLALILTLF  65
            +P+ L + L  LSL+P++ ++ T+FLK+A+ + + RNA+G+QQ+PPNMA+YG+AL  T+F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  66   TMAPVGMAINDNLKATPIVFDAPNVFEQINTEAIAPYRAFLDKNTSNTQIEFFANIGHKV  125
             MAPV+  I++ +   P+ +++++ ++      I P + F+ +NT    +  + +  +++
Sbjct  67   VMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  126  WPEKYQQVLTKDSLLVMVPAFTMSQLIEAFKIGLLIYLPFVAIDLIVSNILLAMGMMMVS  185
            WP    +  TKD LL+ +PAF MS+L  +F IG+LIY+PF+ IDLIVSN+LLA+GM MVS
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  186  PMTIALPFKLLIFILMGGWEKLISQL  211
            PMTI+LP+KLL+F+L++GW +L+  L
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSL  212

71) NH44784_014541 in NC_021285


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  145 bits (534),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 96/197 (49%), Positives = 147/197 (75%), Gaps = 7/197 (3%)

Query  25   MTTSFLKIAVVLTLVRNALGVQQVPPNMALYGLALILSAYVMGPVVMQIGDELRAPPAVA  84
            + T+FLKIA+ L + RNA+GVQQVPPNMALYG+AL  + +VM+PV  +I + ++  P   
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  85   APGTPEPDRLEGILEAVARGAEPMRAFMLKNSRAEQRDFFLRTARGLWGEQQARNLKEDD  144
            +++    D+L+  L +V    EP++ FM +N+ ++    +L  ++ +W  + A +   DD
Sbjct  87   GSA----DKLQTSLRTVI---EPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDD  139

Query  145  LLVLIPSFLLSELTAAFQIGFLLYLPFVIIDLIVSNILLAMGMMMVSPVTISMPLKLFLF  204
            LL+ IP+F++SEL A+F+IGFL+Y+PF++IDLIVSN+LLA+GM MVSP+TIS+PLKL+LF
Sbjct  140  LLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLF  199

Query  205  VMVDGWTRLIQGLVLSY  221
            V+V GW+RL+++L  SY
Sbjct  200  VLVSGWSRLLDSLFYSY  216

72) pscR in NC_011770


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 90/190 (48%), Positives = 144/190 (76%), Gaps = 0/190 (0%)

Query  26   MATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLRNHDVSL  85
            + T+F+K+++ + + RNA+GVQQ+PPNMA+YG+A+  +++VMAPV+   ++ +++H + L
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  86   SDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSLLILLPA  145
            + +  ++  L   + P + F+ R+ +    + ++E+T+++WP E A++   D LL+ +PA
Sbjct  87   GSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPA  146

Query  146  FTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvllDGWA  205
            F +SEL  +FEIGFLIY+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW+
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  206  RLTHGLVISY  215
            RL ++L  SY
Sbjct  207  RLLDSLFYSY  216

73) RHE_PD00059 in NC_004041


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 86/202 (43%), Positives = 146/202 (73%), Gaps = 0/202 (0%)

Query  14   MAAISMLPVIAVIATSFTKISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQN  73
            ++++S++P + ++ T+F KI++ LLI RNAIG+QQ PPN+ +++IA+  + FVM PV ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  74   SWQLLLAHSGDFGTVSGMADGMIKVAAPLKDFMLKFSDAEVRDFFVQASQKIWANAPATP  133
              Q +  H+ ++G+   +  ++  V  PL+ FM + +D++V   +++ +Q++W++  A  
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  134  IASDDITVLTPSFLVSELTRAFEIGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPL  193
             + DD+ +  P+F++SEL  +FEIGFLIY+PF++ID+ VS +L+ALGMQM+SP  +S PL
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  194  KLLLFVSIDGWRRLLEGLVLSY  215
            KLLLFV + GW RLL++L  SY
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

74) hrcR in NC_010996


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  145 bits (535),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 86/202 (43%), Positives = 146/202 (73%), Gaps = 0/202 (0%)

Query  14   MAAISMLPVIAVIATSFTKISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQN  73
            ++++S++P + ++ T+F KI++ LLI RNAIG+QQ PPN+ +++IA+  + FVM PV ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  74   SWQLLLAHSGDFGTVSGMADGMIKVAAPLKDFMLKFSDAEVRDFFVQASQKIWANAPATS  133
              Q +  H+ ++G+   +  ++  V  PL+ FM + +D++V   +++ +Q++W++  A  
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  134  IASDDITVLTPSFLVSELTRAFEIGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPL  193
             + DD+ +  P+F++SEL  +FEIGFLIY+PF++ID+ VS +L+ALGMQM+SP  +S PL
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  194  KLLLFVSIDGWRRLLEGLVLSY  215
            KLLLFV + GW RLL++L  SY
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

75) sctR in NC_005126


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 90/191 (48%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQNEVS  84
            ++ T+FLK+A+ + + RNA+GVQQ+PPNMA+YG+A+  T++VMAPV+   Q+ ++++ + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   FSNAQSVDKFVEEGLTPYRNFLKQHIKPSERTFFIDSTRQIWPSQYADRLEPDSLLILLP  144
            +++A+ ++  +   + P + F+ ++  P   + ++++T+++WP + AD+   D LL+ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFL+Y+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

76) sctR in NC_012962


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 89/191 (47%), Positives = 147/191 (77%), Gaps = 0/191 (0%)

Query  25   VMATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQNEVS  84
            ++ T+FLK+A+ + + RNA+GVQQ+PPNMA+YG+A+  T++VMAPV+   Q+ ++++ + 
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  85   FSNAQSVEKFLEEGMAPYRNFLKQHIKSSERTFFIDSTRQIWPSQYANRLEPDSLLILLP  144
            +++A+ ++  L   + P + F+ ++  +   + ++++T+++WP + A++   D LL+ +P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  145  AFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfklllfvllDGW  204
            AF +SEL  +FEIGFL+Y+PFI IDLI+SN+LLA+GM MVSPMTISLP+KLLLFVL+ GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  205  TRLTHGLVISY  215
            +RL ++L  SY
Sbjct  206  SRLLDSLFYSY  216

77) DvMF_2439 in NC_011769


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  144 bits (530),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 90/204 (45%), Positives = 146/204 (72%), Gaps = 9/204 (4%)

Query  16   LGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPAMVMNGLAIILSIFIMAPMVESTLD  75
            L+L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+  ++F+MAP+ +   +
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  76   ILKTVRVSEQPEPREVVELLDRA----SPPLRDFLSRNADDKVITAFMGTAKRIWPKERH  131
                 RV ++P      + L+ +      PL+ F++RN+D  V++ ++  ++R+WPKE  
Sbjct  78   -----RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  132  DTIRRENLLILVPAFTISELTKAFQIGFLLYLPFVAIDLIISNILLAMGMMMVSPMTISL  191
            D   +++LL+ +PAF +SEL  +F+IGFL+Y+PF+ IDLI+SN+LLA+GM MVSPMTISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  192  PFKLLLFVTLDGWLKISQGLLLSY  215
            P+KLLLFV + GW ++ ++L+ SY
Sbjct  193  PLKLLLFVLVSGWSRLLDSLFYSY  216

78) Dvul_2984 in NC_008741


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  142 bits (524),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 91/215 (43%), Positives = 154/215 (72%), Gaps = 1/215 (0%)

Query  1    MTGVAPLYFIAGMALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAII  60
            M G  P+ +   ++ L+L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+ 
Sbjct  3    MDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA  62

Query  61   LSIFIMAPVASGTLDLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMS  120
             ++F+MAPVA +  + +++  +  ++A + + + L     PL+ F+ RN+D  VV+ ++ 
Sbjct  63   ATMFVMAPVAHDIQQRVHDHPLELGSADK-LQTSLRTVIEPLQRFMTRNTDPDVVAHLLE  121

Query  121  TAKRIWPADQHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMG  180
             ++R+WP +     ++D+LL+ IP+F +SEL  +F+IGFL+Y+PF+ IDL++SN+LLA+G
Sbjct  122  NTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALG  181

Query  181  MMMVSPMTISLPFKLLLFVTLDGWLKVSQGLLLSY  215
            M MVSPMTISLP+KLLLFV + GW ++ ++L+ SY
Sbjct  182  MQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

79) DVUA0122 in NC_005863


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  142 bits (524),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 91/215 (43%), Positives = 154/215 (72%), Gaps = 1/215 (0%)

Query  1    MTGVAPLYFIAGMALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAII  60
            M G  P+ +   ++ L+L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+ 
Sbjct  3    MDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA  62

Query  61   LSIFIMAPVASGTLDLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMS  120
             ++F+MAPVA +  + +++  +  ++A + + + L     PL+ F+ RN+D  VV+ ++ 
Sbjct  63   ATMFVMAPVAHDIQQRVHDHPLELGSADK-LQTSLRTVIEPLQRFMTRNTDPDVVAHLLE  121

Query  121  TAKRIWPADQHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMG  180
             ++R+WP +     ++D+LL+ IP+F +SEL  +F+IGFL+Y+PF+ IDL++SN+LLA+G
Sbjct  122  NTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALG  181

Query  181  MMMVSPMTISLPFKLLLFVTLDGWLKVSQGLLLSY  215
            M MVSPMTISLP+KLLLFV + GW ++ ++L+ SY
Sbjct  182  MQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

80) Deval_3224 in NC_017311


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  142 bits (524),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 91/215 (43%), Positives = 154/215 (72%), Gaps = 1/215 (0%)

Query  1    MTGVAPLYFIAGMALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAII  60
            M G  P+ +   ++ L+L PF+L++ T+++KI +   + RNA+GVQQVPP M + G+A+ 
Sbjct  3    MDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA  62

Query  61   LSIFIMAPVASGTLDLMQNMKIGPDPAPREIIALLDKASPPLRGFLERNADDKVVTVFMS  120
             ++F+MAPVA +  + +++  +  ++A + + + L     PL+ F+ RN+D  VV+ ++ 
Sbjct  63   ATMFVMAPVAHDIQQRVHDHPLELGSADK-LQTSLRTVIEPLQRFMTRNTDPDVVAHLLE  121

Query  121  TAKRIWPADQHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMG  180
             ++R+WP +     ++D+LL+ IP+F +SEL  +F+IGFL+Y+PF+ IDL++SN+LLA+G
Sbjct  122  NTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALG  181

Query  181  MMMVSPMTISLPFKLLLFVTLDGWLKVSQGLLLSY  215
            M MVSPMTISLP+KLLLFV + GW ++ ++L+ SY
Sbjct  182  MQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

81) ETAC_04225 in NC_020796


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 87/193 (46%), Positives = 144/193 (75%), Gaps = 3/193 (1%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  84   E--AQTTLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLL  141
            E  +   L + L    ++P ++F+ ++T +  +  + + + + WP  + +Q + D LLL 
Sbjct  85   ELGSADKLQTSLR-TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  142  MPAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVG  201
            +PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMTIS+P+KLL+F+LV+
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  202  GWDKLLGQLLLSY  214
            GW +LL+ L+ SY
Sbjct  204  GWSRLLDSLFYSY  216

82) esaR in NC_013508


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 87/193 (46%), Positives = 144/193 (75%), Gaps = 3/193 (1%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  84   E--AQTTLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLL  141
            E  +   L + L    ++P ++F+ ++T +  +  + + + + WP  + +Q + D LLL 
Sbjct  85   ELGSADKLQTSLR-TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  142  MPAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVG  201
            +PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMTIS+P+KLL+F+LV+
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  202  GWDKLLGQLLLSY  214
            GW +LL+ L+ SY
Sbjct  204  GWSRLLDSLFYSY  216

83) esaR in NC_017309


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 87/193 (46%), Positives = 144/193 (75%), Gaps = 3/193 (1%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNIALYGLALILTLFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  84   E--AQTTLLARLSDNTLDPYRQFLRQHTSATQLHFFRQVATKSWPASVREQISDDSLLLL  141
            E  +   L + L    ++P ++F+ ++T +  +  + + + + WP  + +Q + D LLL 
Sbjct  85   ELGSADKLQTSLR-TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  142  MPAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVG  201
            +PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMTIS+P+KLL+F+LV+
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  202  GWDKLLGQLLLSY  214
            GW +LL+ L+ SY
Sbjct  204  GWSRLLDSLFYSY  216

84) rhcR in NC_004463


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  140 bits (515),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 93/216 (44%), Positives = 151/216 (70%), Gaps = 2/216 (0%)

Query  1    MTEIQPSILALLAITVGLGLLAFAVVTTTAFIKVSVVLFLVRNALGTQSIPPNIVLYGAA  60
            M   +P +LAL+    +L+L++F ++  TAF+K+++ L++ RNA+G Q +PPN+ LYG A
Sbjct  3    MDGTNPIMLALF--LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LILTVFISAPVFEQTYNRLTDPQLRYQSFDDWVMAAKEGQEPLRVHLKKFTNEEQRRFFL  120
            L  T+F+ APV ++  +R+ D  L   S D    + +   EPL+  + + T+ +    +L
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  SSTEHVWSEEMRGSVTADDFSILVPSFLISELKRGFEIGFLLYLPFITIDLIVTTILMAM  180
             +T+++W+ EM +  T DD+ + +P+F++SEL+ GFEIGFL+Y+PFI IDLIV+ +L+A+
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMSMVSPTVISVPFKLFLFVTIDGWSRLMHGLVLSY  216
            GM MVSP  IS+P+KL+LFV + GWSRL+++L  SY
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

85) rhcR in NC_017249


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  140 bits (515),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 93/216 (44%), Positives = 151/216 (70%), Gaps = 2/216 (0%)

Query  1    MTEIQPSILALLAITVGLGLLAFAVVTTTAFIKVSVVLFLVRNALGTQSIPPNIVLYGAA  60
            M   +P +LAL+    +L+L++F ++  TAF+K+++ L++ RNA+G Q +PPN+ LYG A
Sbjct  3    MDGTNPIMLALF--LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LILTVFISAPVFEQTYNRLTDPQLRYQSFDDWVMAAKEGQEPLRVHLKKFTNEEQRRFFL  120
            L  T+F+ APV ++  +R+ D  L   S D    + +   EPL+  + + T+ +    +L
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  SSTEHVWSEEMRGSVTADDFSILVPSFLISELKRGFEIGFLLYLPFITIDLIVTTILMAM  180
             +T+++W+ EM +  T DD+ + +P+F++SEL+ GFEIGFL+Y+PFI IDLIV+ +L+A+
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMSMVSPTVISVPFKLFLFVTIDGWSRLMHGLVLSY  216
            GM MVSP  IS+P+KL+LFV + GWSRL+++L  SY
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

86) N646_0740 in NC_022349


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 142/195 (73%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L  +  ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

87) VEA_003362 in NC_013456


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 142/195 (73%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L  +  ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

88) VPBB_1532 in NC_019955


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 142/195 (73%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L  +  ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

89) ssaR in NC_021848


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 142/195 (73%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L  +  ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

90) ssaR in NC_021847


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 142/195 (73%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L  +  ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

91) VP1672 in NC_004603


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 142/195 (73%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHIRETEAIFFTDAARTLWPQKYVDRLESDSll  140
            H + L  +  ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

92) M892_04535 in NC_022269


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (512),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHIRETESVFFTDAARTLWPQKYVDRLESDSll  140
            H + L  ++ ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

93) VIBHAR_01726 in NC_009783


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (512),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 90/195 (47%), Positives = 143/195 (74%), Gaps = 0/195 (0%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PF+ ++ T+F+K+A+ + + RNA+GVQQ+PPNMALYG+A+  ++F+MAPV+ +  + V +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHIRETESVFFTDAARTLWPQKYVDRLESDSll  140
            H + L  ++ ++  + + ++P + F+ ++        + + ++ +WP+   D+   D LL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  141  lllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISlpfklllfvl  200
            L +PAF +SEL  +FEIGFL+Y+PFI IDLIVSN+LLA+GM MVSPMTISLP+KLLLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  201  lDGWTKLTHGLVLSY  215
            + GW++L ++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

94) S58_72190 in NC_020453


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  139 bits (512),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 144/202 (72%), Gaps = 0/202 (0%)

Query  13   IAGLGLVTFAVVTMTSFVKIAVVLFLIRNALGVQQTPPNLVLYAIALVLTAYVSAPLVQA  72
            +++L+L+ F ++  T+F+KIA+ L++ RNA+GVQQ PPN+ LY+IAL  T +V AP+ + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  73   VYERVNDRATEFQTFADWKDAAERATQPVREHLSRFTTVAERDFFVTATGSLWPDSSRAK  132
            + +RV+D++ E+ +    + +     +P++  ++R T       ++  T  +WP     +
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  133  LSSEDLVILVPSFMSSELKRAFEIGFLLYLPFIAIDLVVSAVLMSLGMSMVPPSTISVPF  192
             + +DL++ +P+F+ SEL+ +FEIGFL+Y+PFI IDL+VS +L++LGM MV+P TIS+P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  193  KLFLFVMVEGWSKLMHGLVLSY  214
            KL+LFV+V GWS+L+++L  SY
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

95) hrcR in NC_011983


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  138 bits (508),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 87/202 (44%), Positives = 146/202 (73%), Gaps = 0/202 (0%)

Query  15   MAAISILPVIAVVATSFTKIAVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPILQQ  74
            ++++S++P + +V T+F KIA+ LLI RNAIG+QQ PPN+ +++IA+  + FVM P+ ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  75   CWQVLLRADVHFDTINGLAAGLSEVGAPLKAFMMKFSDEEVRQFFVNSSQRIWGDTATLP  134
              Q +    +++++ + L ++L  V  PL+ FM + +D +V   +++++QR+W    +  
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  135  ASPDDITVLTPSFLVSELTRAFEIGFLLYLPFLMIDFAVSAILVALGMQMMSPTVVSTPF  194
            A+ DD+ +  P+F++SEL  +FEIGFL+Y+PF++ID+ VS +L+ALGMQM+SP  +S P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  195  KLLLFVGVDGWRRLLEGLVLSY  216
            KLLLFV V GW RLL++L  SY
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

96) C770_GR4pB210 in NC_019847


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  137 bits (502),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 141/200 (71%), Gaps = 0/200 (0%)

Query  16   AISVLPVIAVVATSFTRISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQSSW  75
            ++S++P + +V T+F +I++ LLI RNAIG+QQ PPN+ +++IA+  + FVM PV +   
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   QLLILHGADFSTVGGMADGMVKVGAPLKEFMTKFSDEEVRGFFVEASQKIWVDAPTIPIA  135
            Q +  H  ++++ + +  ++  V  PL+ FMT+ +D +V + ++E +Q++W    +   +
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  136  SDDVTILTPSFLVSELTRAFEAGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPIKL  195
             DD+ +  P+F++SEL  +FE GFLIY+PF++ID+ VS +L+ALGMQM+SP  +S P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  196  LLFVSIDGWRRLLEGLVLSY  215
            LLFV + GW RLL++L  SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

97) bglu_2g02340 in NC_012721


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  137 bits (502),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 82/201 (41%), Positives = 148/201 (74%), Gaps = 0/201 (0%)

Query  16   AISLLPFVAMVVTSYAKVVVVLGLLRNALGVQQVPPNMVLNGIAILVSLYVMAPIGMQAS  75
            ++SL+PF+ +V T++ K+ + L + RNA+GVQQVPPNM L GIA+  +++VMAP++ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   KSLEGQQLASQPSQALIQAFGAAREPFRAFLEKHTQEREKRFFLRSAAVVWPKEQAQQLS  135
            + ++++ L   +++ L  ++ +  EP++ F+ ++T+      +L ++  +WPKE A+Q +
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  136  EHDLIVLAPSFTLSELTDAFKIGFLLYIAFIVVDLIIANVLLALGLNQVTPTNVAIPFKL  195
             +DL++  P+F +SEL  +F IGFL+YI+FIV+DLI++N+LLALG++ V+P  +++P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  196  LLFVVMDGWSTLIHGLVMTYK  216
            LLFV++ GWS L+++L  +Y 
Sbjct  197  LLFVLVSGWSRLLDSLFYSYM  217

98) Meso_0110 in NC_008254


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  137 bits (503),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 147/200 (74%), Gaps = 0/200 (0%)

Query  19   ALSFIPFIVVMGTAFTKISIVLMLLRNAIGVQQAPSGLVINSIALTLTVFVMVPVGNAII  78
            +LS+IPF++++ TAF KI++ L++ RNAIGVQQ P+ + + +IAL+ T+FVM PV++ I 
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  79   TQVQQQQLGFTGWENVSQLYSVVSEAFTGYLKQFSSPRELQFFMDAARKMWPETLHGQIT  138
             +V+++ L + + +++      V E++  ++ + + P  +  +++ +++MWP  + +Q T
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  139  TDNVFILLPAHVTSELTRAFQIAFLIFLPFVVVDMVVSNILLAMGAMMVPPMLVSLPIKI  198
             D++++ +PA V SEL  +F+I+FLI++PF+V+D++VSN+LLA+G  MV+PM +SLP+K+
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  199  LLFVAADGWALLLHNLVLSY  218
            LLFV   GW+ LL++L  SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

99) bgla_2g02730 in NC_015376


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 147/201 (74%), Gaps = 0/201 (0%)

Query  16   AISLLPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAILVSIYVMAPIGMQAS  75
            ++SL+PF+ +V T++ KI + L + RNA+GVQQVPPNM L GIA+  +++VMAP++ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   KALEGQQLASQPSQALIQAFGAAKEPFRAFLVKHTAEREKRFFLRSAAVVWPKEQAQQLS  135
            + ++++ L   +++ L  ++ +  EP++ F+ ++T       +L ++  +WPKE A+Q +
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  136  ENDLIVLAPSFTLSELTDAFKIGFLLYIAFIVVDLIIANVLLALGLNQVTPTNVAIPFKL  195
             +DL++  P+F +SEL  +F IGFL+YI+FIV+DLI++N+LLALG++ V+P  +++P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  196  LLFVVMDGWSTLIHGLVMTYK  216
            LLFV++ GWS L+++L  +Y 
Sbjct  197  LLFVLVSGWSRLLDSLFYSYM  217

100) sctR in NC_020127


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 84/196 (43%), Positives = 140/196 (72%), Gaps = 1/196 (0%)

Query  20   PFVIMMVTSYVKIVVVTSLIRNALGVQQVPPAIVMNGLAIILSIFIMAPVYMKMEDLYLK  79
            PF++++ T+++KI +   + RNA+GVQQVPP + + G+A+  ++F+MAPV   +++    
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   TALPSSPAALEVIKALYDATPPLREFLIRNADESTIRGLMVTAKRIWPKDQHETISRNNL  139
             +L  ++A   +  +L     PL+ F+ RN+D   +  L+  ++R+WPK+  +  ++++L
Sbjct  82   HPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LIIIPAFTITELTKSFQIGFLLYLPFVAIDLVVSNILLAMGMMMVSPMTISLPFKLLLFV  199
            L+ IPAF ++EL  +F+IGFL+Y+PF+ IDL+VSN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  TLDGWLKISQGLMLSY  215
             + GW ++ ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

101) SctR in NC_008011


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 84/196 (43%), Positives = 140/196 (72%), Gaps = 1/196 (0%)

Query  20   PFVIMMVTSYVKIVVVTSLIRNALGVQQVPPAIVMNGLAIILSIFIMAPVYMKMEDLYLK  79
            PF++++ T+++KI +   + RNA+GVQQVPP + + G+A+  ++F+MAPV   +++    
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   TALPSSPAALEVIKALYDATPPLREFLIRNADESTIRGLMVTAKRIWPKDQHETISRNNL  139
             +L  ++A   +  +L     PL+ F+ RN+D   +  L+  ++R+WPK+  +  ++++L
Sbjct  82   HPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  140  LIIIPAFTITELTKSFQIGFLLYLPFVAIDLVVSNILLAMGMMMVSPMTISLPFKLLLFV  199
            L+ IPAF ++EL  +F+IGFL+Y+PF+ IDL+VSN+LLA+GM MVSPMTISLP+KLLLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  200  TLDGWLKISQGLMLSY  215
             + GW ++ ++L  SY
Sbjct  201  LVSGWSRLLDSLFYSY  216

102) Y11_35451 in NC_017564


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  136 bits (501),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 92/193 (48%), Positives = 140/193 (73%), Gaps = 0/193 (0%)

Query  24   MVMGTSFLKLSIVLSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPL  83
            +++ T+FLK+++ L + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D++ R++D+PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  84   PNDLGALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDIVQTKWPVRYRDTIKPNSLLILM  143
              + +  L       +EP + F+ RNTD+  V  + +  Q  WP    D    + LL+ +
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  144  PAFTLSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLIFILIDG  203
            PAF +S+L  +F IG+L+Y+PF+ IDLIVSN+LLA+GM MVSP+TISLP+KLL+F+L+ G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  204  WGLLLGQLVGSYL  216
            W+ LL+ L  SY+
Sbjct  205  WSRLLDSLFYSYM  217

103) yscR in NC_016642


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  136 bits (498),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 82/189 (44%), Positives = 145/189 (77%), Gaps = 0/189 (0%)

Query  28   TSFIKLSVVLLLVRNALGVQQIPPNMALNALAIILSGYIMLPVFLQTFEILEKGNYSIAT  87
            T+F+K+++ LL+ RNA+GVQQ+PPNMAL ++A+  + ++M PV  +  + ++     +++
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  88   VEDMKTTFVAAKGPLEEFLAKHADSKEKAFFLEASRQLWPAEVADSMSADSIAILLPAYT  147
             + ++T++ +   PL+ F+++++D+   A +LE ++++WP E+AD  + D + + +PA+ 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  148  VSQLREAFEIGFLLYLPFLAIDLVVSNILLAMGMMMVSPLTISLPFKLFLFVAVDGWSRL  207
            +S+L+ +FEIGFL+Y+PF+ IDL+VSN+LLA+GM MVSP+TISLP+KL+LFV V GWSRL
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  208  ILGLIKTYV  216
            + +L+ +Y+
Sbjct  209  LDSLFYSYM  217

104) YE105_C0338 in NC_015224


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 91/193 (48%), Positives = 140/193 (73%), Gaps = 0/193 (0%)

Query  24   MVMGTSFLKLSIVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPL  83
            +++ T+FLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D++ R++D+PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  84   PNDLGALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDIVQTKWPVRYRDTIKPNSLLILM  143
              + +  L       +EP + F+ RNTD+  V  + +  Q  WP    D    + LL+ +
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  144  PAFTLSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLIFILIDG  203
            PAF +S+L  +F IG+L+Y+PF+ IDLIVSN+LLA+GM MVSP+TISLP+KLL+F+L+ G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  204  WGLLLGQLVGSYL  216
            W+ LL+ L  SY+
Sbjct  205  WSRLLDSLFYSYM  217

105) ECs4583 in NC_002695


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (497),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 85/188 (46%), Positives = 141/188 (75%), Gaps = 6/188 (3%)

Query  30   IGTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINY  89
            + T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++ 
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  90   TDSDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILL  145
              +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +
Sbjct  87   GSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAI  144

Query  146  PAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGG  205
            PAF M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  206  WQKLFEFL  213
            W +L++ L
Sbjct  205  WSRLLDSL  212

106) escR in NC_013353


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 84/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKENVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ + V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

107) escR in NC_013364


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

108) escR in NC_011601


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

109) epaP in NC_011353


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

110) escR in NC_002655


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

111) escR in NC_013008


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

112) escR in NC_013361


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 84/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKENVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ + V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

113) escR in NC_013941


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

114) ECO55CA74_21290 in NC_017656


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

115) CDCO157_4318 in NC_017906


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 140/186 (76%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  TMF+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFFQKVDEKILSPYRGFLEKNTEKDNVEFF----ERAAQKKLGNETILKKDSLFILLPA  147
            +D +Q     ++ P + F+ +NT+ D V  +    +R   K +++++   KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA--TKDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+LV+GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

116) F504_4358 in NC_021745


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 86/202 (43%), Positives = 144/202 (72%), Gaps = 2/202 (0%)

Query  15   AIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFVMAPVGMEAM  74
            +++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + FVMAPV+ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  75   QRAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAAQ  134
            QR H +    G+++  Q    L +  +P++ F+ ++T++   A ++ ++Q++WP   A Q
Sbjct  77   QRVHDHPLELGSADKLQTS--LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  135  LKDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPF  194
               DDL++  PAF ++EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  195  KLLLFVVMDGWSVLIHGLVNTY  216
            KLLLFV++ GWS L+++L  +Y
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

117) hrcR in NC_003296


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 86/202 (43%), Positives = 144/202 (72%), Gaps = 2/202 (0%)

Query  15   AIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFVMAPVGMEAM  74
            +++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + FVMAPV+ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  75   QRAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAAQ  134
            QR H +    G+++  Q    L +  +P++ F+ ++T++   A ++ ++Q++WP   A Q
Sbjct  77   QRVHDHPLELGSADKLQTS--LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  135  LKDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPF  194
               DDL++  PAF ++EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  195  KLLLFVVMDGWSVLIHGLVNTY  216
            KLLLFV++ GWS L+++L  +Y
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

118) spaP in NC_017731


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 79/189 (42%), Positives = 142/189 (76%), Gaps = 2/189 (1%)

Query  9    TLLPFIIAAGTCYLKISIVLIMVRNAMGVQQVPSTMALNGIAMLLSLFVMMPVVQDISHY  68
            +L+PF++   T +LKI++ L++ RNA+GVQQVP+ MAL GIA+  ++FVM PV +DI + 
Sbjct  19   SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQR  78

Query  69   MREEKVDFGNVESVDNFVDGGLGRYKAYLQKYSDPELV-QFFESVQQQRNEEPMDAEAHS  127
            ++++ +++G+ + ++  +   +   + ++ + +DP++V +++E+ Q+ +  E M  +A  
Sbjct  79   VHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE-MADQATK  137

Query  128  ATLFSLLPAYALSEVKSAFEIGFYIYLPFVVIDLVISSILLALGMMMMSPVTISVPVKLI  187
              L+  +PA+ +SE++++FEIGF IY+PF+VIDL++S++LLALGM M+SP+TIS+P+KL+
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  188  LFVAIDGWS  196
            LFV + GWS
Sbjct  198  LFVLVSGWS  206

119) A1122_03785 in NC_017168


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

120) epaP in NC_010159


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

121) YPA_4012 in NC_008150


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

122) fliP1 in NC_005810


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

123) YPO0270 in NC_003143


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

124) YPD4_0235 in NC_017154


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

125) YPD8_0240 in NC_017160


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

126) y0530 in NC_004088


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

127) YPN_3397 in NC_008149


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

128) YPDSF_3700 in NC_009381


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

129) YPZ3_0233 in NC_014029


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

130) epaP in NC_009708


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  28   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  87
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  88   GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  147
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  148  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  207
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  208  LGQLVGSYL  216
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

131) YPTB0327 in NC_006155


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

132) YPTS_0351 in NC_010634


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

133) YPK_3902 in NC_010465


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 91/189 (49%), Positives = 138/189 (74%), Gaps = 0/189 (0%)

Query  48   TAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELSNDI  107
            TAFLK+++ + + RNA+GVQQVPPN+A+YG+AL  T+F+MAPV+ D+Q R++++ L  + 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  108  GALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWPERYRDSVKPDSLLILMPAFT  167
            +   +   +  + P + F+ RNTD + V+ + +  Q  WP    D    D LL+ +PAF 
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  168  LSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLVFVLVDGWSLV  227
            +S+L+ +F IG+L+++PF+ IDLIVSN+LLA+GM MVSPMT+SLP+KLL+FVLV GWS +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  228  LGQLVGSYL  236
            L+ L  SY+
Sbjct  209  LDSLFYSYM  217

134) PSPPH_2535 in NC_005773


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  134 bits (492),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 160/216 (75%), Gaps = 2/216 (0%)

Query  1    MNGYQPNLIEIILVVATIGLIPLAVVTLTGFMKISVVLFLIRNALGVQQTPPNLVLYGIA  60
            M+G +P ++ ++L  ++++LIP+ ++  T+F+KI++ L++ RNA+GVQQ PPN+ LYGIA
Sbjct  3    MDGTNPIMLALFL--GSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  61   LILSVYVTTPLIGDMYREVQGRDLSLQNVQQLEELGSALCPTLQAHLSKFANESERGFFV  120
            L  +++V +P+  D+ + V+++ L L + ++L+    ++   LQ  +++ ++    + ++
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  121  QATETIWSPEaradlrdddlvvlIPAFVSSELTRAFEIGFLLYIPFLVVDLLVSNVLMAM  180
            + T+ +W+ E   +   DDL++ IPAFV SEL  +FEIGFL+YIPF+V+DL+VSN+L+A+
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  181  GMSMVSPTLISIPLKIFLFVALSGWSRLMHGLILSY  216
            GM MVSP  IS+PLK++LFV +SGWSRL+++L+ SY
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

135) mlr8766 in NC_002678


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  132 bits (484),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 133/179 (75%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMTDPKLHYQTFDDWVSAAK  97
            L++ RNA+G Q +PPN+ALY++AL  TMF+ APV ++  +R+ D  L+  + D   ++ +
Sbjct  38   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLR  97

Query  98   SGSEPLRDHLKKFTNEEQRQFFLSSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFE  157
            +  EPL+  + + T+ +    +L +T+++WP EM  +AT DDL + +P+F++SEL+ +FE
Sbjct  98   TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFE  157

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  IS+P+KL++FV + GWS+L+++L  SY
Sbjct  158  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

136) hrcR in NC_014310


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 143/202 (71%), Gaps = 2/202 (0%)

Query  15   AIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFIMAPVGMEAM  74
            +++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + F+MAPV+ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  75   QRAHVQINAQGGTNITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAAL  134
            QR H +    G+++  Q    L +  +P++ F+ ++T++   A ++ ++Q++WP   A  
Sbjct  77   QRVHDHPLELGSADKLQTS--LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  135  LKDDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPF  194
               DDL++  PAF ++EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  195  KLLLFVVMDGWSVLVHGLVNTY  216
            KLLLFV++ GWS L+++L  +Y
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

137) escR in NC_013716


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  131 bits (482),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 83/186 (45%), Positives = 142/186 (77%), Gaps = 6/186 (3%)

Query  32   TSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTIFIMSPIILQINDNISQEPINYTD  91
            T+FLKI++ L I +NA+G+QQVPPNMAL +++L  T+F+M+P+  +I++ + ++P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  92   SDFYQKVDGKIISPYRIFLENNTNKENI-DFFENVAK---KKLGNETSLKKDSLFILLPA  147
            +D  Q     +I P + F+  NT+ + + +++EN  +   K ++++++  KD L++ +PA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT--KDDLLLAIPA  146

Query  148  FTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILIGGWQ  207
            F M++L+A+F IGFL+Y+PFI IDLI+SN+LLALGM MVSP+TIS+P+K+LLF+L++GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  208  KLFEFL  213
            +L++ L
Sbjct  207  RLLDSL  212

138) REMIM1_PE00285 in NC_021909


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  131 bits (480),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 80/186 (44%), Positives = 132/186 (71%), Gaps = 0/186 (0%)

Query  31   FIKVSVVLFLVRNALGTQTIPPNIVLYAAALILTLFISAPVIEQTYIRIADPKLRYQTLD  90
            F+K+++ L++ RNA+G Q +PPN+ LY+ AL  T+F+ APV ++   R+ D  L   + D
Sbjct  31   FLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSAD  90

Query  91   DWVTAAEEGREPLRDYLKKFTSEEQRRFFLSSTKQVWPEEMRARTTPDDFAILVPSFLIS  150
               T+     EPL+ ++ + T  +    +L +T+++WP EM  ++T DD+ + +P+F++S
Sbjct  91   KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFVMS  150

Query  151  ELKRAFEIGFLLYLPFICIDLIVTTILMAMGMSMVSPTVIAVPFKLFLFVTIDGWSQLMH  210
            EL+ +FEIGFL+Y+PFI IDLIV+ +L+A+GM MVSP  I++P+KL+LFV + GWS+L++
Sbjct  151  ELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRLLD  210

Query  211  GLVLSY  216
            +L  SY
Sbjct  211  SLFYSY  216

139) hrcR in NC_017575


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  131 bits (481),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 85/202 (43%), Positives = 143/202 (71%), Gaps = 2/202 (0%)

Query  15   AIALLPFAAMVVTSYTKIVVVLGLLRNALGVQQVPPNMVLNGIAMIVSCFIMAPVGMEAM  74
            +++L+PF  +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + F+MAPV+ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  75   QRAHVQLNAQGGANITQVMPLLDAARDPFREFLNKHTNAREKAFFMRSAQQLWPPAKAAL  134
            QR H +    G+A+  Q    L +  +P++ F+ ++T++   A ++ ++Q++WP   A  
Sbjct  77   QRVHDHPLELGSADKLQTS--LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  135  LKEDDLIVLAPAFTLTELTSAFRIGFLLYLAFIVIDLVIANLLMALGLSQVTPSNVAIPF  194
               DDL++  PAF ++EL ++F IGFL+Y++FIVIDL+++NLL+ALG+  V+P  +++P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  195  KLLLFVVMDGWSVLVHGLVNTY  216
            KLLLFV++ GWS L+++L  +Y
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

140) SFHH103_04305 in NC_018294


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 81/179 (46%), Positives = 128/179 (72%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIVLYAAALILTMFVSAPIAEQTYDRITDPRLRYQSLDDWAEAAK  97
            L++ RNA+G Q +PPN+ LY+ AL  TMFV AP+A++  +R+ D  L   S D    + +
Sbjct  38   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLR  97

Query  98   AGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRARVTADDFAILVPSFLISELKRAFE  157
            +  +PL   + + T+ +    +L +T+++WP EM  + T DD+ + +P+F++SEL+ +FE
Sbjct  98   TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFE  157

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  I++P+KL+LFV + GWSRL+++L  SY
Sbjct  158  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

141) USDA257_p02850 in NC_018179


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 81/179 (46%), Positives = 128/179 (72%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIVLYAAALILTMFVSAPIAEQTYDRITDPRLRYQSLDDWAEAAK  97
            L++ RNA+G Q +PPN+ LY+ AL  TMFV AP+A++  +R+ D  L   S D    + +
Sbjct  38   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLR  97

Query  98   AGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRARVTADDFAILVPSFLISELKRAFE  157
            +  +PL   + + T+ +    +L +T+++WP EM  + T DD+ + +P+F++SEL+ +FE
Sbjct  98   TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFE  157

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  I++P+KL+LFV + GWSRL+++L  SY
Sbjct  158  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

142) rhcR in NC_000914


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  130 bits (476),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 82/179 (46%), Positives = 127/179 (71%), Gaps = 0/179 (0%)

Query  38   LFLVRNALGTQTIPPNIVLYAAALILTMFVSAPVAEQTYDRITDPRLRYQSLDDWAEAAK  97
            L++ RNA+G Q +PPN+ LY+ AL  TMFV APVA++  +R+ D  L   S D    + +
Sbjct  38   LLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLR  97

Query  98   AGSQPLLEHLKKFTNEEQRRFFLSSTEKVWPEEMRAGVTADDFAILVPSFLISELKRAFE  157
            +  +PL   + + T+ +    +L +T+++WP EM    T DD+ + +P+F++SEL+ +FE
Sbjct  98   TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFE  157

Query  158  IGFLLYLPFIVIDLIVTTILMAMGMSMVSPTIIAVPFKLFLFVAIDGWSRLMHGLVLSY  216
            IGFL+Y+PFIVIDLIV+ +L+A+GM MVSP  I++P+KL+LFV + GWSRL+++L  SY
Sbjct  158  IGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

143) BamMC406_5644 in NC_010557


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 142/202 (71%), Gaps = 2/202 (0%)

Query  16   AISLIPFVAMVATSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAVLVSAYVMAPIGMQAM  75
            ++SLIPF+ +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + +VMAP++ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   QTMQTMHRTPGSDTSLVVLDAFDAAKEPFRAFLKKHAHEREKRFFVRSATVVWPKDMAAK  135
            Q ++      GS   L    ++ +  EP++ F+ ++++      ++ ++  +WPK+MA +
Sbjct  77   QRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  136  VREDDLIVLAPAFTLTEMADAFKIGFLLYIAFIVVDLVIANVLMAMGLNQVQPTNVAIPF  195
               DDL++  PAF ++E+  +F IGFL+YI+FIV+DL+++N+L+A+G++ V P  +++P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  196  KLLLFVVMSGWSTLIHGLVMTY  217
            KLLLFV++SGWS L+++L  +Y
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

144) Bamb_5861 in NC_008392


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  127 bits (466),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 142/202 (71%), Gaps = 2/202 (0%)

Query  16   AISLIPFVAMVATSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAVLVSAYVMAPIGMQAM  75
            ++SLIPF+ +V T++ KI + L + RNA+GVQQVPPNM L GIA+  + +VMAP++ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   QTMQTMHRTPGSDTSLVVLDAFDAAKEPFRAFLKKHAHEREKRFFVRSATVVWPKDMAAK  135
            Q ++      GS   L    ++ +  EP++ F+ ++++      ++ ++  +WPK+MA +
Sbjct  77   QRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  136  IREDDLIVLAPAFTLTEMADAFKIGFLLYIAFIVVDLVIANVLMAMGLNQVQPTNVAIPF  195
               DDL++  PAF ++E+  +F IGFL+YI+FIV+DL+++N+L+A+G++ V P  +++P+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  196  KLLLFVVMSGWSTLIHGLVMTY  217
            KLLLFV++SGWS L+++L  +Y
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSY  216

145) BUPH_00158 in NC_018672


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  125 bits (458),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 146/200 (73%), Gaps = 0/200 (0%)

Query  16   AISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAILVSLYVMAPVgmqam  75
            ++SL+PF+ +V T++ KI + L + RNA+GVQQVPPNM L G+A+  +++VMAPV+ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   qsmqgqaiagqPTQALIQVFSTAREPFRTFLQKHTNEREKRFFIRSANVVWPKDAAASLH  135
            Q ++++++   +++ L   + T  EP++ F+ ++T+      ++ +++ +WPK+ A    
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  136  ENDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGLNQVTPTNVAIPFKL  195
             +DL++  PAF ++EL  +F IGFL+YI+FIVIDLI++N+LLA+G++ V+P  +++P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  196  LLFVVMDGWSTLIHGLVMTY  215
            LLFV++ GWS L+++L  +Y
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

146) BC1003_3642 in NC_014540


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 146/200 (73%), Gaps = 0/200 (0%)

Query  16   AISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAILVSIYVMAPVgmqam  75
            ++SL+PF+ +V T++ KI + L + RNA+GVQQVPPNM L G+A+  +++VMAPV+ +  
Sbjct  17   SLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ  76

Query  76   qsmqgqaiagqPTQALIQVFSAAREPFRTFLQKHTNEREKRFFIRSANVVWPKEAASSLH  135
            Q ++++++   +++ L   + +  EP++ F+ ++T+      ++ +++ +WPKE A    
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  136  ENDLIVLAPAFTLTELTDAFKIGFLLYIAFIVIDLIIANVLLAMGLNQVTPTNVAIPFKL  195
             +DL++  PAF ++EL  +F IGFL+YI+FIVIDLI++N+LLA+G++ V+P  +++P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  196  LLFVVMDGWSTLIHGLVMTY  215
            LLFV++ GWS L+++L  +Y
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

147) XC_3016 in NC_007086


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (450),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YSPG-ADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

148) hrcR in NC_003902


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (450),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YSPG-ADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

149) xccb100_3079 in NC_010688


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (450),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YSPG-ADNSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

150) hrcR in NC_017271


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (449),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 134/195 (69%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YSPG-AENSRVVVLLDACREPFRQFLLKHTREREKAFFIRSAQQIWPKDKADTLKPDDLL  138
             +   +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ AD    DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  LDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

151) XOO_0095 in NC_007705


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (449),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

152) epaP in NC_010717


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (449),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

153) SARI_01563 in NC_010067


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VADAPFWMSEWDSKALAPYRQFLQKNSEEKEASYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            ++ A   +       + P ++F+ +N++    + + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

154) epaP in NC_011149


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAKL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

155) hrcR in NC_003919


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

156) hrcR in NC_016010


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

157) XAC29_02060 in NC_020800


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

158) hrcR in NC_007508


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

159) hrcR in NC_020815


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRVVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  VLAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSMLIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

160) hrcR in NC_017267


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  123 bits (448),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  20   PFAALVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  79
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  80   YGAG-SDNSRIVVLLDACREPFRQFLLKHTREREKAFFMRSAQQIWPKDKAATLKSDDLL  138
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  139  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  198
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  199  MDGWSILIHGLVLSY  213
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

161) SG1305 in NC_007712


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 127/185 (69%), Gaps = 3/185 (1%)

Query  28   TSFLKLAVVLSILRNALGIQQVPPNMALYGLALILSLFIMAPTALAV--KAQWHPVAAPG  85
            T+FLK+A+ L I RNA+G+QQVPPNMALYG+AL  ++F+MAP A  +  + + HP+   +
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  86   DTPWASGWDGKALMPYRQFLRRNADEKEIRYFHQLVTKTWPEEARRRVRPDSLLILLPAF  145
                 ++     + P ++F+ RN+D   +  + +   + WP E   +   D LL+ +PAF
Sbjct  89   ADKLQTSLR-TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAF  147

Query  146  TVSQLSQAFRIGLLIYLPFLAIDLLVSNVLLAMGMMMVSPMTISLPFKLLIFMLAGGWDL  205
             +S+L  +F IG+LIY+PF+ IDL+VSN+LLA+GM MVSPMTISLP+KLL+F+L +GW  
Sbjct  148  VMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSR  207

Query  206  ILSQL  210
            +L  L
Sbjct  208  LLDSL  212

162) NT01EI_0960 in NC_012779


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 83/193 (44%), Positives = 144/193 (75%), Gaps = 3/193 (1%)

Query  24   IVMGTSFLKLSVVFALLRNALGIQQIPPNlalyglaliltlFIMTPVGTAVQARLADAPA  83
            +++ T+FLK+++ + + RNA+G+QQ+PPN+ALYG+AL  T+F+M+PV+  +Q R+ D P 
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  84   Q--AQTTLLSRLSDNTLDPYRQFLRQHTSAKQLKFFRQVATKSWPASVREKISDNSLLLL  141
            +  +   L + L    ++P ++F+ ++T +  +  + + + + WP  + ++ + + LLL 
Sbjct  85   ELGSADKLQTSLR-TVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  142  MPAFAVSQLVEAFQIGLLLFLPFIAIDLIVSNILLAMGMMMVSPMTISMPFKLLVFILVG  201
            +PAF +S+L  +F+IG+L+++PFI IDLIVSN+LLA+GM MVSPMTIS+P+KLL+F+LV+
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  202  GWDKILGQLLLSY  214
            GW ++L+ L+ SY
Sbjct  204  GWSRLLDSLFYSY  216

163) ssaR in NC_021820


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

164) ssaR in NC_006905


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

165) ssaR in NC_021818


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

166) epaP in NC_011205


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

167) SEEH1578_16330 in NC_021810


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

168) SU5_02035 in NC_017623


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

169) ssaR in NC_021812


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

170) epaP in NC_011083


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

171) CFSAN001992_04495 in NC_020307


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

172) SSPA1332 in NC_011147


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

173) yscR in NC_006511


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

174) SPAB_01906 in NC_010102


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

175) yscR in NC_012125


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

176) epaP in NC_011094


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

177) yscR in NC_003198


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

178) ssaR in NC_016856


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

179) yscR in NC_017046


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

180) STMMW_14241 in NC_016854


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

181) ssaR in NC_003197


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

182) yscR in NC_016810


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

183) ssaR in NC_016857


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

184) STMDT12_C14350 in NC_016860


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

185) STU288_03415 in NC_021151


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

186) ssaR in NC_016863


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

187) ssaR in NC_021814


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

188) STBHUCCB_13770 in NC_016832


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

189) TY21A_06540 in NC_021176


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

190) yscR in NC_004631


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      + +  +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

191) epaP in NC_021174


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 129/191 (68%), Gaps = 2/191 (1%)

Query  24   VLVTSFTKIAVVFALVKNAIGIQQVPSTLVTNALALIVTLYVMAPVLSDVAANASNGPAR  83
            ++ T+F KIA+ + + +NAIG+QQVP+ +   ++AL  T++VMAPV  D+     + P  
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  84   --GQSRIEWLSGAVSGPVGGFMKKHVDPREQERLIASAAQIWPDTMAKSVKPDDFFILAP  141
              +  +++    +V  P+  FM ++ DP    +L+ ++ ++WP  MA     DD+++  P
Sbjct  86   LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  142  AFAISELTAAFKIGFVLYLAFVAIDLIVANILMAMGMIMFSPTIVSIPLKIVLFALADGW  201
            AF +SEL A+F IGF++Y++F+ IDLIV+N+L+A+GM M SP  +S+PLK++LF L  GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

Query  202  SRLIQSLILTY  212
            SRL++SL+ +Y
Sbjct  206  SRLLDSLFYSY  216

192) hrcR in NC_006834


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  122 bits (447),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 84/195 (44%), Positives = 132/195 (68%), Gaps = 1/195 (0%)

Query  32   PFAAMVVTSYTKIVVVLGLLRNAIGVQQVPPNMVLNGVALLVSCFVMAPVGMEAFKAAQN  91
            PF  +V T++ KI + L + RNAIGVQQVPPNM L G+AL  + FVMAPV+ +  +  ++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  92   YGAG-SDNSRIVVLLDACREPFRQFLLKHTPEREKAFFMRSAQQIWPKDKATTLKSDDLL  150
                 +   ++   L +  EP+++F+ ++T     A ++ ++Q++WPK+ A     DDLL
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  151  ILAPAFTLSELTEAFRIGFLLYLVFIVIDLVVANALMAMGLSQVTPTNVAIPFKLLLFVA  210
            +  PAF +SEL  +F IGFL+Y+ FIVIDL+V+N L+A+G+  V+P  +++P+KLLLFV 
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  211  MDGWSMLIHGLVLSY  225
            + GWS L+++L  SY
Sbjct  202  VSGWSRLLDSLFYSY  216

193) ssaR in NC_021844


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

194) SBOV14161 in NC_022241


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

195) ssaR in NC_011294


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

196) ssaR in NC_011274


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

197) ssaR in NC_022221


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

198) ssaR in NC_016831


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

199) epaP in NC_011080


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

200) SN31241_24890 in NC_021902


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

201) ssaR in NC_021984


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 131/188 (70%), Gaps = 3/188 (1%)

Query  25   VMGTSFLKLAVVFSILRNALGIQQVPPNIALYGLALVLSLFIMGPTLLAVKER--WHPVQ  82
            ++ T+FLK+A+ + I RNA+G+QQVPPN+ALYG+AL  ++F+M+P    +++R   HP++
Sbjct  26   IVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE  85

Query  83   VAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRSLIKRTWPEDIKRKIKPDSLLILI  142
            +++A    +      + P ++F+ +N++      +    +R WP ++  +   D LL+ I
Sbjct  86   LGSADKLQTSL-RTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  143  PAFTVSQLTQAFRIGLLIYLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGG  202
            PAF +S+L  +F IG+LIY+PF+ IDL++SN+LLA+GM MVSPMTISLP+KLL+F+L +G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  203  WDLTLAQL  210
            W   L  L
Sbjct  205  WSRLLDSL  212

202) JCM7686_1775 in NC_022041


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 88/217 (41%), Positives = 150/217 (70%), Gaps = 5/217 (2%)

Query  1    MDSPFPLLIAA--AGLMVVPFIVVSLTAFVKIAVVLFLVRSALGVQQTPPNLVLYGVTIV  58
            MD+  P+++A   ++L ++PF+++  TAF+KIA+ L++ R+A+GVQQ PPN+ LYG+++ 
Sbjct  3    MDGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALA  62

Query  59   LTGYVMSPVLAASFAEMTNGGQMDALPPPSEWPGLIQRGLGPVREFLMRFTTPVDRAFFL  118
             T +VM+PV A  + +  ++  ++ L ++      ++  + P++ F+ R T P   A +L
Sbjct  63   ATMFVMAPV-AHDIQQRVHDHPLE-LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLL  120

Query  119  SAAEEM-HKTSGVVPSEQDLFILAPAFVTAELTRAFEIGVMLYLPFIVVDLVITNILTAM  177
              ++ M  K  +  ++ +DL++  PAFV +EL  +FEIG ++Y+PFIV+DL+++N+L A+
Sbjct  121  ENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL  180

Query  178  GMMMVSPTVISLPFKLLLFVAVDGWARLTHGLVMSYV  214
            GM MVSP  ISLP+KLLLFV V GW+RL ++L  SY+
Sbjct  181  GMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

203) ssaR in NC_012751


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  115 bits (420),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 138/188 (74%), Gaps = 0/188 (0%)

Query  24   VVMGTCFLKLSVVFSLLRNALGVQQTPPNIAIYGLALVLTIFIMAPVGLEVNESLKGEKL  83
            +++ T FLK+++ + + RNA+GVQQ PPN+A+YG+AL  T+F+MAPV+ ++++ + ++ L
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  84   SQDFGTFVEQINSKALDPYRQFLLHNTSSEQINFFSDMIKNNWPKKYRDKVASDSLLILM  143
              + +  ++      ++P ++F+ +NT ++ +  + +  +  WPK   D+ + D LL+ +
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  144  PAFTVSQLIEAFKIGLLLYLPFVAIDLIVSNILLAmgmmmmspmTISLPFKILIFLLVGG  203
            PAF +S+L  +F IG+L+Y+PF+ IDLIVSN+LLA+GM M+SPMTISLP+K+L+F+LV+G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  204  WDMILGQL  211
            W  +L+ L
Sbjct  205  WSRLLDSL  212

204) CK3_11030 in NC_021035


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 78/194 (41%), Positives = 134/194 (70%), Gaps = 6/194 (3%)

Query  26   ALLPSIVVMMSSFMRIIIILSFTRNAMGVQQTPPNMVLTGMALFLSLYIMSPVIGQINTV  85
            +L+P ++++ ++F++I + L +TRNA+GVQQ PPNM L G+AL  ++++M+PV  +I+  
Sbjct  19   SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQR  78

Query  86   AYE-PYKNGEITQ-QEAVSRMADPLKQFMLRNTEKDTLDHFVQ----MSKQEVKKDVKEY  139
              + P   G   + Q ++  + +PL++FM RNT+ D + H+++    M  +E+  +    
Sbjct  79   VHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  140  PLTVVVPAFMTSELKKGFLAGFLIYLPFLLIDIVVSTTLMSMGMVMLPPTMVSLPFKLLL  199
             L + +PAF+ SEL+ GF  GFLIY+PF++ID++VS  L+++GM M++P  +SLP+KLLL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  200  FITVNGWELLFSSL  213
            F+ V+GW  L+ SL
Sbjct  199  FVLVSGWSRLLDSL  212

205) Cabther_B0538 in NC_016025


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 92/205 (45%), Positives = 137/205 (67%), Gaps = 13/205 (6%)

Query  52   PFALIMMTSFVKISVVLSILRNALGTQQVPPNQVITGISLILTIFIMAPVAEKM---LEE  108
            PF LI+ T+F+KI++ L I RNA+G QQVPPN  + GI+L  T+F+MAPVA+ +   +++
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  109  AGLSDATAPVFTEMRADTLFKALDKGKEPLRAFLERNAHEADRRLFLGLAQRLAQKNGKD  168
              L  ++A        D L  +L    EPL+ F+ RN++      +L  +QR+  K+  D
Sbjct  82   HPLELGSA--------DKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMAD  133

Query  169  PNAITVRDFRVVVPAFVTSQLTEAFQIGFLLFIPFLVIDMLVSNILQAMGMFMLSPTMIS  228
              +    D+ + +PAFV S+L  +F+IGFL++IPF+VID++VSN+L A+GM M+SP  IS
Sbjct  134  QATKD--DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  229  LPfklllfvlvkGWVTLIQNLVLSY  253
            LP+KLLLFVLV GW  L+++L  SY
Sbjct  192  LPLKLLLFVLVSGWSRLLDSLFYSY  216

206) fliP in NC_007498


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 85/206 (42%), Positives = 147/206 (72%), Gaps = 10/206 (4%)

Query  48   LIMTVLSVAPAILLMTTAFIRLAVVLSFLRQAMGTQQMPPNQVIIGLSLFLTFFVMSPVF  107
            L++  LS+ P +L++ TAF+++A+ L + R+A+G QQ+PPN  + G++L  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  108  NQINDQAVQPYLTQKIDQK--QALTLAVEPMRQFMFSQTTESELSLLMEISGH------P  159
            ++I+++  +  L     +K   +L   +EP+++FM  +T    ++ L+E + +      +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  160  DPAGKEDVPTLTLIPAFMLSELKRAFQIGFMIYIPFLVIDMIVASVLMSMGMMMLPPIII  219
            D A K+D+  L  IPAF++SEL+ +F+IGF+IYIPF+VID+IV+++L+++GM M++P+ I
Sbjct  133  DQATKDDL--LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  220  SLPFKLLLFVLVDGWTLIVGSLVQSF  245
            SLP+KLLLFVLV GW+ +++SL  S+
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSLFYSY  216

207) Atc_1493 in NC_015850


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 141/205 (69%), Gaps = 6/205 (2%)

Query  24   LFMTVLVFLPALLLMMTAFTRIIIVLSLLKQALGSTQMPPSQVMVGLALFLTFFVMAPVF  83
            LF+  L ++P LL++ TAF +I + L + ++A+G  Q+PP+  + G+AL  T FVMAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  84   QQINTEAL-QPLN-DNKIDLVQAMAKAEGPLRNFMLSQTRPDDLALFV----KLSGHKAL  137
            ++I+     +PL+ ++   L  ++     PL+ FM  +T PD +A ++    ++      
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  138  EKPSDTPLSLLVPAFITSELKTGFQIGFLIFIPFVIIDLVVAAVLMSLGMMMLSPVTVSF  197
            ++++   L L +PAF+ SEL++GF+IGFLI+IPF++IDL+V+ +L++LGM M+SP+T+S+
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  198  PLKLMLFVLVDGWDLVIGSLVQSFV  222
            PLKL+LFVLV GW  +++SL  S++
Sbjct  193  PLKLLLFVLVSGWSRLLDSLFYSYM  217

208) MYSTI_06240 in NC_020126


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 79/196 (41%), Positives = 140/196 (72%), Gaps = 2/196 (1%)

Query  42   FAVLMLTSFSKIAVVLSLARSAMGTQQAPPtvvltglavvltgHIMASVMERMYDAGQLA  101
            F +++ T+F KIA+ L ++R+A+G QQ PP + L G+A+  T  +MA+V + +    ++ 
Sbjct  23   FLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDI--QQRVH  80

Query  102  YQEMETGSGTKILESAAKVAEPLRTFLVKHGSAEERARFVDLARELRPPEEADTVSETDL  161
             + +E GS+ K+  S   V EPL+ F+ ++  ++  A++++ ++ ++P E AD  +  DL
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDL  140

Query  162  FVVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSPSQVSLPFKILLFV  221
            ++ IPAFV++EL+ +F+IGFL+++PF+V+D++++N+LLALGMQ +SP  +SLP+K+LLFV
Sbjct  141  LLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFV  200

Query  222  AVDGWSLLARGLILGY  237
             V GWS L  +L+ +Y
Sbjct  201  LVSGWSRLLDSLFYSY  216

209) lfiP in NC_013716


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  107 bits (388),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 134/188 (72%), Gaps = 8/188 (4%)

Query  57   GLLPTLVLMMTCFTRFIIVLSLLRQALGLQQTPPNRILIGIALCLTMLVMRPIWLNIYDR  116
            +L+P L+++ T F ++ + L + R+A+G+QQ PPN  L GIAL  TM+VM P+  +I +R
Sbjct  19   SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQR  78

Query  117  AV-VPFE-NDQMTLSDALSTAATPLKRFMLAQTNKKAMAQIMTIA------DVKGDAADQ  168
                P+E      L  +L T   PL+RFM  +T+   +A+++  +      ++ ++A+ +
Sbjct  79   VHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  169  DLTIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLML  228
            DL + +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  229  FVLIDGWS  236
            FVL+ GWS
Sbjct  199  FVLVSGWS  206

210) sctR in NC_002620


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 92/221 (42%), Positives = 151/221 (69%), Gaps = 12/221 (5%)

Query  94   TTQAVIILFLA---LSPFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSI  150
            T   ++ LFL+   L PFL+++ T++LKI +TL++ RNA+GVQQ PP+  L GIAL  ++
Sbjct  6    TNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATM  65

Query  151  YVMFPTGMAMYNDAKKGIESDAVPRDLFSAEGAETVFVALNKSKEPLRSFLINNTPKPQI  210
            +VM P +    +D ++ ++ +  P +L SA+  +T   +L    EPL+ F+  NT    +
Sbjct  66   FVMAPVA----HDIQQRVHDH--PLELGSADKLQT---SLRTVIEPLQRFMTRNTDPDVV  116

Query  211  QSFYKISQKTFPPELRQQLTPSDFVVVIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANV  270
              +   +Q+  P E+ +Q T  D+++ IPAF+M++++ +FEIG LIY+PF+VIDL+ +N+
Sbjct  117  AHLLENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNL  176

Query  271  LVAMQmmmlsplsislplklllvvmvDGWTLLLEGLMISFK  311
            L+A+ M M+SP++ISLPLKLLL V+V GW+ LL++L  S+ 
Sbjct  177  LLALGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

211) B595_1074 in NC_018619


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 140/198 (71%), Gaps = 9/198 (4%)

Query  5    TSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQGNAI  64
            T++LKI +TL++ RNA+GVQQ PP+  L GIAL  +++VM P +    +D ++ ++++++
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA----HDIQQRVHDHPL  84

Query  65   PRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASD  124
              +L SA+  +T   +L    EPL+ F+ RNT    +  +   +Q+  P E+ ++ T  D
Sbjct  85   --ELGSADKLQT---SLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDD  139

Query  125  FVIVIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANVLVAMQmmmlsplsislplklllv  184
            +++ IPAF+M++++ +FEIG LIY+PF+VIDL+ +N+L+A+ M M+SP++ISLPLKLLL 
Sbjct  140  LLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLF  199

Query  185  vmvDGWTLLLQGLMISFK  202
            V+V GW+ LL++L  S+ 
Sbjct  200  VLVSGWSRLLDSLFYSYM  217

212) B600_1069 in NC_018621


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 140/198 (71%), Gaps = 9/198 (4%)

Query  5    TSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQGNAI  64
            T++LKI +TL++ RNA+GVQQ PP+  L GIAL  +++VM P +    +D ++ ++++++
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA----HDIQQRVHDHPL  84

Query  65   PRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASD  124
              +L SA+  +T   +L    EPL+ F+ RNT    +  +   +Q+  P E+ ++ T  D
Sbjct  85   --ELGSADKLQT---SLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDD  139

Query  125  FVIVIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANVLVAMQmmmlsplsislplklllv  184
            +++ IPAF+M++++ +FEIG LIY+PF+VIDL+ +N+L+A+ M M+SP++ISLPLKLLL 
Sbjct  140  LLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLF  199

Query  185  vmvDGWTLLLQGLMISFK  202
            V+V GW+ LL++L  S+ 
Sbjct  200  VLVSGWSRLLDSLFYSYM  217

213) B711_1071 in NC_018625


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 140/198 (71%), Gaps = 9/198 (4%)

Query  5    TSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPTGVAMYNDARKEIQGNAI  64
            T++LKI +TL++ RNA+GVQQ PP+  L GIAL  +++VM P +    +D ++ ++++++
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA----HDIQQRVHDHPL  84

Query  65   PRDLFSAEGAETVFVALNKSKEPLRSFLIRNTPKSQIQSFYKISQKTFPPEIREHMTASD  124
              +L SA+  +T   +L    EPL+ F+ RNT    +  +   +Q+  P E+ ++ T  D
Sbjct  85   --ELGSADKLQT---SLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDD  139

Query  125  FVIVIPAFIMGQIKNAFEIGVLIYLPFFVIDLVTANVLVAMQmmmlsplsislplklllv  184
            +++ IPAF+M++++ +FEIG LIY+PF+VIDL+ +N+L+A+ M M+SP++ISLPLKLLL 
Sbjct  140  LLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLF  199

Query  185  vmvDGWTLLLQGLMISFK  202
            V+V GW+ LL++L  S+ 
Sbjct  200  VLVSGWSRLLDSLFYSYM  217

214) Bxe_A3122 in NC_007951


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  106 bits (386),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 137/199 (69%), Gaps = 6/199 (3%)

Query  17   LGLLPLAVAMTTSFTKFSIVLTLLRSALGVQQAPSNLVISGMALAATLVVMAPTLSKIEA  76
            L+L+P+ + + T+F K+++ L + R+A+GVQQ P+N+ + G+ALAAT+ VMAP    I+ 
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  77   ALDTGDGAMPRPTELVQAVR---GPLGEFMLKHSRLEERQFLVSAAKRIDP---EHEAHD  130
             ++     +  +  L  ++R    PL  FM +++  +    L+  ++R+ P    ++A  
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  131  TDLQLLIPAFLISEISSGFEAGFLLYIAFLVVDLVVANVLSAMGMMMLSPSTVSIPLKLF  190
             DL L IPAF++SE+ +GFE GFL+YI+F+V+DL+V+N+L A+GM M+SP T+S+PLKL+
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  191  IFVSASGMSKLMHGLIVSY  209
            +FV  SG S+L+++L+ SY
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

215) fliP in NC_016002


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 87/208 (42%), Positives = 144/208 (70%), Gaps = 13/208 (6%)

Query  48   LFMTALSFIPALLLMMTSFTRIIIVLSLLRQAMGTMQAPPNQVLVGLALFLTLFVMGPTF  107
            LF+ +LS+IP LL++ T+F +I + L + R+A+G  Q PPN  L G+AL  T+FVM+P  
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  108  DQVYSKAWVPFSEDKIGFAQMLEEGSK----PMREFMLKQTREKDLAFFIEVSQSPAPPT  163
            +++  + +V      +G A+ L+ + +    P++ FM ++T    +A ++E +Q   P  
Sbjct  73   HDI--QQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  164  PAEVSMKT----LIPAFVISELKTAFQIGFMVFIPFLIIDLVVASILMAMGMMMVSPVII  219
             A+ + K      IPAFV+SEL+++F+IGF+++IPF++IDL+V+++L+A+GM MVSP+ I
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  220  SLPFKLMLFVLVDGWTLLMGSLVRSFYT  247
            SLP+KL+LFVLV GW+ L++SL   FY+
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

216) Cwoe_0066 in NC_013739


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (379),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 95/218 (44%), Positives = 148/218 (68%), Gaps = 13/218 (5%)

Query  4    VDGDSAIQVLLLIGAFTLIPAGLF-CLTGFTRILIVLGFIRTAIGTPTAPPNQVLVGIAL  62
            +DG ++I + L++G+++LIP  L+ C T+F +I + L + R AIG    PPN  L GIAL
Sbjct  3    MDGTNPIMLALFLGSLSLIPFLLIVC-TAFLKIAMTLLITRNAIGVQQVPPNMALYGIAL  61

Query  63   FLTLFVMAPTFTQIKETAWD-PLEAGRINTAQ-AVRRAEEPLRQFMFEQTRTKDLALFVR  120
              T+FVMAP   +I++   D PLE G  +  Q ++R   EPL++FM   TR  D  +  +
Sbjct  62   AATMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAH  118

Query  121  LSRTREQ--PRTRADIPTT----VLIPAFIVSELKTAFQIGFMIFLPFLVIDLIVASTLM  174
            L    ++  P+  AD +T     + IPAF++SEL+++F+IGF+I++PF+VIDLIV++ L+
Sbjct  119  LLENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLL  178

Query  175  SMGMIMLPPVFISLPFKILLFVLVDGWALITDSLVRSF  212
            ++GM M++P+ ISLP+K+LLFVLV GW+ + DSL  S+
Sbjct  179  ALGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

217) fliP in NC_010468


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 80/185 (44%), Positives = 128/185 (70%), Gaps = 14/185 (7%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNI----YDHA  115
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I     DH+
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  116  VVPFENDRITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDLS  169
            +     D+  L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL 
Sbjct  84   LELGSADK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  170  IVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVL  229
            + +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  230  IDGWS  234
            + GWS
Sbjct  202  VSGWS  206

218) fliP2 in NC_017660


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVV-P  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

219) EKO11_3667 in NC_016902


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVV-P  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

220) fliP in NC_022364


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVV-P  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

221) lfiP in NC_013364


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVV-P  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

222) fliP in NC_013361


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVV-P  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

223) lfiP in NC_017635


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVV-P  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

224) fliP2 in NC_017664


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVV-P  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGHAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

225) fliP in NC_010498


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 81/189 (43%), Positives = 131/189 (70%), Gaps = 10/189 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAV-VP  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM PV  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDLTIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWSLTIGTL  240
            GWS  +++L
Sbjct  204  GWSRLLDSL  212

226) fliP in NC_016745


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 78/183 (43%), Positives = 132/183 (73%), Gaps = 6/183 (3%)

Query  62   SFTRIIVVLAVLRQALGLQQSPPNRVLIGIALSLTLLIMRPVLQDIYHHAF-VPYDNGTI  120
            +F +I + L + R+A+G+QQ PPN  L GIAL+ T+++M PV +DI ++    P + G+ 
Sbjct  30   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSA  89

Query  121  G-FEQALMTAKAPLQTFMLAQTRETDLEQILNIAQE--PTDLSPEEVPFEVL--IPAFVL  175
            + ++ +L T   PLQ FM  +T    + ++L+ +Q   P +++ +    ++L  IPAFV+
Sbjct  90   DKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFVM  149

Query  176  SELKTAFQIGFMLFIPFLVIDLVVASVLMAMGMMMLSPLVISLPFKLMLFVLVDGWSMTV  235
            SEL+++F+IGF+++IPF+VIDL+V+++L+A+GM M+SP+ ISLP+KL+LFVLV GWS  +
Sbjct  150  SELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRLL  209

Query  236  GTL  238
            ++L
Sbjct  210  DSL  212

227) lfiP in NC_017626


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  103 bits (375),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 80/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAV-VP  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM PV  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

228) fliP in NC_011751


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  103 bits (375),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 80/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAV-VP  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM PV  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

229) ENC_28610 in NC_021046


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  103 bits (375),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 150/216 (70%), Gaps = 19/216 (8%)

Query  43   PIQTLLLLSGFTFIPAVLLMMTGFTRIVIVLGLMRNALGTPTAPPNQVLVGLALFLTFFV  102
            PI   L+L+++++IP +L++ T+F +I + L + RNA+G    PPN  L G+AL  T FV
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  103  MSPVLNQIYEQAW-QPLQ-ANKITMETALKEGVKPLRAFMLEQTREADLAMFARI-AKTP  159
            M+PV ++I ++   +PL+ ++   ++T+L+  + PL+ FM   TR++D  + A++  +T 
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQ  124

Query  160  TL--------TGPEDVPLSILVPSFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGM  211
             +        +  +D+ L+I  P+FV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM
Sbjct  125  RMWPKEMADQATKDDLLLAI--PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM  182

Query  212  MMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  247
             MV+P TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  183  QMVSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

230) lfiP in NC_017663


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  103 bits (373),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 79/183 (44%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FARFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAV-VP  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ TM+VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

231) fliP in NC_003869


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  103 bits (372),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 79/184 (43%), Positives = 132/184 (72%), Gaps = 7/184 (3%)

Query  40   TSFTRIVIVLAFLRNALGLQQMPPNQVLIGLALFLTFYIMAPVGYDINNNAIKPYVE-GQ  98
            T+F +I + L + RNA+G+QQ+PPN  L G+AL  T ++MAPV+ DI++      +E G 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  99   INQYEAYQRA-IKPLKNFMLRQTRQNDLA-LFVNLAKIKVDKVEDLPMR----VVIPAFI  152
             ++ ++  R+ I PL+ FM R+T  + +A L+ N  ++    + D + +    + IPAF+
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  153  ISELKTAFEIGFIIYIPFLVIDIIVASVLMSMGMFMLPPVLISLPFKVLLFILVDGWNLV  212
            +SEL+++FEIGF+IYIPF+VID+IV+++L+++GM M++P+ ISLP+K+LLF+LV GW+ +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  213  VKSL  216
            + SL
Sbjct  209  LDSL  212

232) Calkro_0478 in NC_014720


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 132/194 (69%), Gaps = 12/194 (6%)

Query  63   PSILIMMTSFTRILIVLGFIRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAY-  121
            P +LI+ T+F +I + L + RNA+G QQ+PPN  L G+AL  T FVMAPV++ I  +   
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  122  QPYINGRITS-QEALKRAEEPLKEFMLKNTRKKDLDLFVKLSNVNPNTNVKDLP------  174
            +P   G     Q +L+   EPL+ FM   TR+ D D+   L +       K+++      
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  175  -LRVVVPAFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILL  233
             L + +PAF++SEL+++FE+GFLIY+PF++ID++V+++L+++GM M++P+ ISLP+K+LL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  234  FILVDGWNLVVESL  247
            F+LV GW+ +++SL
Sbjct  199  FVLVSGWSRLLDSL  212

233) fliP1 in NC_017644


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 78/183 (43%), Positives = 127/183 (70%), Gaps = 10/183 (5%)

Query  62   LMMTC--FTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTLLVMRPIWLNIYDHAV-VP  118
            L++ C  F ++ + L + R+A+G+QQ PPN  L GIAL+ T++VM P+  +I ++    P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  119  FE-NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIG------GAKGNAADQDLSIV  171
            +E      L  +L T   PL+RFM  +TD   +A+++            ++A+ +DL + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  172  VPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLID  231
            +PA+V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL+ 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  232  GWS  234
            GWS
Sbjct  204  GWS  206

234) Calhy_0599 in NC_014652


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 132/194 (69%), Gaps = 12/194 (6%)

Query  64   PSILIMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAY-  122
            P +LI+ T+F +I + L + RNA+G QQ+PPN  L G+AL  T FVMAPV++ I  +   
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  123  QPYINGRITS-QEALKRAEEPLKEFMLKNTRKKDLDLFVKLSNVNPNTNVKDLP------  175
            +P   G     Q +L+   EPL+ FM   TR+ D D+   L +       K+++      
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  176  -LRVVVPAFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILL  234
             L + +PAF++SEL+++FE+GFLIY+PF++ID++V+++L+++GM M++P+ ISLP+K+LL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  235  FILVDGWNLVVESL  248
            F+LV GW+ +++SL
Sbjct  199  FVLVSGWSRLLDSL  212

235) Calkr_0422 in NC_014721


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 132/194 (69%), Gaps = 12/194 (6%)

Query  64   PSILIMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAY-  122
            P +LI+ T+F +I + L + RNA+G QQ+PPN  L G+AL  T FVMAPV++ I  +   
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  123  QPYINGRITS-QEALKRAEEPLKEFMLKNTRKKDLDLFVKLSNVNPNTNVKDLP------  175
            +P   G     Q +L+   EPL+ FM   TR+ D D+   L +       K+++      
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  176  -LRVVVPAFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILL  234
             L + +PAF++SEL+++FE+GFLIY+PF++ID++V+++L+++GM M++P+ ISLP+K+LL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  235  FILVDGWNLVVESL  248
            F+LV GW+ +++SL
Sbjct  199  FVLVSGWSRLLDSL  212

236) fliP in NC_021745


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 136/202 (68%), Gaps = 12/202 (5%)

Query  51   FLTSLGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPV--  108
            FL SL+++P +L++ ++F +I + L + R+A+G Q  PPN  L G+AL  T FVM+PV  
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  109  --LDKVYTDAYLPLRDSKISVEQALDTAATPLRQFMLKQTREPDLA--LFAKMGNLPPIA  164
               ++V  ++ L L  +   ++ +L T   PL++FM ++T +PD+   L+ +   + P  
Sbjct  74   DIQQRVHDHP-LELGSAD-KLQTSLRTVIEPLQRFMTRNT-DPDVVAHLLENTQRMWPKE  130

Query  165  SPDQVPMRAL---IPAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIF  221
             +DQ     L   IPAFV SEL+++F+IGF I+IPF+VID++V+ +L+++GM MV+P  +
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  222  SLPFKIMLFVLVDGWHLLLGSL  243
            SLP+K++LFVLV GW  LL+SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

237) fliP in NC_003296


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 136/202 (68%), Gaps = 12/202 (5%)

Query  51   FLTSLGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPV--  108
            FL SL+++P +L++ ++F +I + L + R+A+G Q  PPN  L G+AL  T FVM+PV  
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  109  --LDKVYTDAYLPLRDSKISVEQALDTAATPLRQFMLKQTREPDLA--LFAKMGNLPPIA  164
               ++V  ++ L L  +   ++ +L T   PL++FM ++T +PD+   L+ +   + P  
Sbjct  74   DIQQRVHDHP-LELGSAD-KLQTSLRTVIEPLQRFMTRNT-DPDVVAHLLENTQRMWPKE  130

Query  165  SPDQVPMRAL---IPAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIF  221
             +DQ     L   IPAFV SEL+++F+IGF I+IPF+VID++V+ +L+++GM MV+P  +
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  222  SLPFKIMLFVLVDGWHLLLGSL  243
            SLP+K++LFVLV GW  LL+SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

238) fliP in NC_017575


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 84/201 (42%), Positives = 135/201 (68%), Gaps = 8/201 (3%)

Query  50   VFLTSLGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVL  109
            +FL SL+++P +L++ ++F +I + L + R+A+G Q  PPN  L G+AL  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  110  DKVYTDAYV-PLR-DSKISVEQALDTAATPLRQFMLKQTREPDLA--LFAKMGNLPPIAS  165
            + +       PL  +S   ++ +L T   PL++FM ++T +PD+   L+ +   + P   
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNT-DPDVVAHLLENTQRMWPKEM  131

Query  166  PDQVPMRAL---IPAFVTSELKTSFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFS  222
            +DQ     L   IPAFV SEL+++F+IGF I+IPF+VID++V+ +L+++GM MV+P  +S
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  223  LPFKIMLFVLVDGWHLLLGSL  243
            LP+K++LFVLV GW  LL+SL
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL  212

239) fliP in NC_014121


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 146/216 (68%), Gaps = 19/216 (8%)

Query  39   PVQTLLLLSGFTFIPAILLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLSLFLTFFV  98
            P+   L+L+++++IP +L++ T+F +I + L + RNA+G    PPN  L G++L  T FV
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  99   MSPVFSQIYEKAW-QPLQ-ENKITMEVALTEGVKPLRAFMLDQTRESDLAMFARIAKT--  154
            M+PV  +I ++   +PL+  +   ++ +L   + PL+ FM   TR++D  + A++     
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQ  124

Query  155  -------PDIASPEEVPLSILVPAFITSELKTAFQIGFTIFIPFLIIDLVVASILMALGM  207
                   +D A+ +++ L+I  PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM
Sbjct  125  RMWPKEMADQATKDDLLLAI--PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM  182

Query  208  MMVPPTTIALPFKLMLFVLVDGWQLLVGSLAQSFYS  243
             MV+P TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  183  QMVSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

240) Calla_1939 in NC_015949


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  101 bits (367),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 132/194 (69%), Gaps = 12/194 (6%)

Query  64   PSILIMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAY-  122
            P +LI+ T+F +I + L + RNA+G QQ+PPN  L G+AL  T FVMAPV++ I  +   
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  123  QPYINGRITS-QEALKRAEEPLKEFMLKNTRKKDLDLFVKLSNVNPNTNVKDLP------  175
            +P   G     Q +L+   EPL+ FM   TR+ D D+   L +       K+++      
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  176  -LRVVVPAFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILL  234
             L + +PAF++SEL+++FE+GFLIY+PF++ID++V+++L+++GM M++P+ ISLP+K+LL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  235  FILVDGWNLVVESL  248
            F+LV GW+ +++SL
Sbjct  199  FVLVSGWSRLLDSL  212

241) A3UG_14735 in NC_018079


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  101 bits (367),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 86/211 (41%), Positives = 144/211 (69%), Gaps = 19/211 (9%)

Query  44   LLLSGFTFIPAVLLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLSLFLTFFVMSPVF  103
            L+L+++++IP +L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  104  SQIYEKAW-QPLQ-ENKITMEVALTEGVKPLRAFMLDQTRESDLAMFARI---------A  152
             +I ++   +PL+  +   ++ +L   + PL+ FM   TR++D  + A++          
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  153  KTPDIASPEEVPLSILVPAFITSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPP  212
              +D A+ +++ L+I  PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P
Sbjct  130  EMADQATKDDLLLAI--PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  213  TTIALPFKLMLFVLVDGWQLLVGSLAQSFYS  243
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

242) Athe_2157 in NC_012034


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  101 bits (366),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 132/194 (69%), Gaps = 12/194 (6%)

Query  63   PSILIMMTSFTRILIVLGFIRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYIQAY-  121
            P +LI+ T+F +I + L + RNA+G QQ+PPN  L G+AL  T FVMAPV++ I  +   
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  122  QPYINGRITS-QEALKRAEEPLKEFMLKNTRKKDLDLFVKLSNVNPNTNVKDLP------  174
            +P   G     Q +L+   EPL+ FM   TR+ D D+   L +       K+++      
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  175  -LRVVVPAFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILL  233
             L + +PAF++SEL+++FE+GFLIY+PF++ID++V+++L+++GM M++P+ ISLP+K+LL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  234  FILVDGWNLVIESL  247
            F+LV GW+ +++SL
Sbjct  199  FVLVSGWSRLLDSL  212

243) fliP in NC_014310


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  101 bits (366),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 135/201 (68%), Gaps = 8/201 (3%)

Query  50   VFLTSLGFLPAILLMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTFFVMSPVL  109
            +FL SL+++P +L++ ++F +I + L + R+A+G Q  PPN  L G+AL  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  110  DKVYTDAYV-PLR-DSKISVEQALDTAATPMRQFMLKQTREPDLA--LFAKMGNLPPIAS  165
            + +       PL  +S   ++ +L T   P+++FM ++T +PD+   L+ +   + P   
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNT-DPDVVAHLLENTQRMWPKEM  131

Query  166  PDQVPMRAL---IPAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFS  222
            +DQ     L   IPAFV SEL+++F+IGF I+IPF+VID++V+ +L+++GM MV+P  +S
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  223  LPFKIMLFVLVDGWHLLLGSL  243
            LP+K++LFVLV GW  LL+SL
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL  212

244) fliP in NC_007712


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  101 bits (365),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 91/206 (45%), Positives = 132/206 (65%), Gaps = 11/206 (5%)

Query  55   FLTSLTFIPAALLMMTSFTRIIIVLGLLRSAIGTPSAPPNQVLLGLALFLTFFVMSPVLD  114
            FL SL++IP  L++ T+F +I + L + R+AIG    PPN  L G+AL  T FVM+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  115  SIYTEAY---LPLSENKISMQTALERGSQPLRAFMLRQTREADLG-LFARLANVPPLEGP  170
             I        L L+     +QT+L    +PL+ FM R+T    ++ L+     + P E +
Sbjct  74   DIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  171  EAVPMRILL---PAYVTSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATISL  227
            +      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  228  PFKLMLFVLVDGWQLLLSSLAQSFYS  253
            P+KL+LFVLV GW  LL SL   FYS
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

245) NT01EI_2431 in NC_012779


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  101 bits (365),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 89/214 (42%), Positives = 139/214 (65%), Gaps = 15/214 (7%)

Query  42   PVQTLVFLTSLSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFI  101
            P+   +FL SLS++P  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  102  MSPVLDKIYQEAY-QPFS-EQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQPE  159
            M+PV + I Q    +P+       ++T+L     PL+ FM   TR+TD  + ++L  + +
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQ  124

Query  160  ----MQGPEDVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMM  212
                 + +++     LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM M
Sbjct  125  RMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQM  184

Query  213  VPPATISLPFKLMLFVLVDGWQLLLGSLAQSFYT  246
            V+P TISLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  185  VSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

246) fliP in NC_012962


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 89/210 (43%), Positives = 137/210 (66%), Gaps = 17/210 (8%)

Query  52   VFITALGFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFMTFFIMSPVF  111
            +F+ +L++IP  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  112  DKVYQDAY---LPFSEDKISLETALENGAKPLRQFMLRQTRENDLALFARLADQP----P  164
            + + Q      L ++     L+T+L     PL++FM   TR+ D  + A+L ++     P
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWP  128

Query  165  FETADSVPMRVLM---PAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPA  221
             E AD      L+   PAF+ SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P 
Sbjct  129  KEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  188

Query  222  TISLPFKLMLFVLVDGWQLLLGSLAQSFYG  251
            TISLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  189  TISLPLKLLLFVLVSGWSRLLDSL---FYS  215

247) fliP in NC_005126


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 89/209 (43%), Positives = 136/209 (66%), Gaps = 17/209 (8%)

Query  46   FITALTFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFMTFFIMSPVFD  105
            F+ +L++IP  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  106  KVYQDAY---LPFSEDKISLETALENGAKPLRQFMLRQTRENDLALFARLADQP----PF  158
             + Q      L ++     L+T+L     PL++FM   TR+ D  + A+L ++     P 
Sbjct  74   DIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  159  ETADSVPMRVLM---PAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPAT  215
            E AD      L+   PAF+ SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  216  ISLPFKLMLFVLVDGWQLLLGSLAQSFYG  244
            ISLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

248) ETAC_10205 in NC_020796


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 89/214 (42%), Positives = 139/214 (65%), Gaps = 15/214 (7%)

Query  42   PVQTLVFLTSLSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFI  101
            P+   +FL SLS++P  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  102  MSPVLDKIYQDAY-QPFS-EQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQPE  159
            M+PV + I Q    +P+       ++T+L     PL+ FM   TR+TD  + ++L  + +
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQ  124

Query  160  ----MQGPEDVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMM  212
                 + +++     LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM M
Sbjct  125  RMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQM  184

Query  213  VPPATISLPFKLMLFVLVDGWQLLLGSLAQSFYT  246
            V+P TISLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  185  VSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

249) fliP in NC_013508


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 89/214 (42%), Positives = 139/214 (65%), Gaps = 15/214 (7%)

Query  42   PVQTLVFLTSLSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFI  101
            P+   +FL SLS++P  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  102  MSPVLDKIYQDAY-QPFS-EQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQPE  159
            M+PV + I Q    +P+       ++T+L     PL+ FM   TR+TD  + ++L  + +
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQ  124

Query  160  ----MQGPEDVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMM  212
                 + +++     LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM M
Sbjct  125  RMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQM  184

Query  213  VPPATISLPFKLMLFVLVDGWQLLLGSLAQSFYT  246
            V+P TISLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  185  VSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

250) fliP in NC_017309


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 89/214 (42%), Positives = 139/214 (65%), Gaps = 15/214 (7%)

Query  42   PVQTLVFLTSLSFLPAALLLMTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFI  101
            P+   +FL SLS++P  L++ T+F +I + L + RNA+G    PPN  L G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  102  MSPVLDKIYQDAY-QPFS-EQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQPE  159
            M+PV + I Q    +P+       ++T+L     PL+ FM   TR+TD  + ++L  + +
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQ  124

Query  160  ----MQGPEDVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMM  212
                 + +++     LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM M
Sbjct  125  RMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQM  184

Query  213  VPPATISLPFKLMLFVLVDGWQLLLGSLAQSFYT  246
            V+P TISLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  185  VSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

251) fliP in NC_009436


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYADAYQPFSEDKISMQVALEKGAQPLREFMLRQTREADLALFARLANEG----  157
                +++  ++ +  S DK  +Q +L    +PL+ FM   TR++D  + A+L ++     
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PIQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKIMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+K++LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

252) COB47_1938 in NC_014392


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (363),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 79/194 (41%), Positives = 132/194 (69%), Gaps = 12/194 (6%)

Query  64   PSILIMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAY-  122
            P +LI+ T+F +I + L + RNA+G QQ+PPN  L G+AL  T FVMAPV++ I  +   
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  123  QPYIKGQITS-QEALKRAEQPLKEFMLKNTRKKDLDLFVKLGNINPNTNVKDLPIR----  177
            +P   G     Q +L+   +PL+ FM   TR+ D D+   L +       K+++ +    
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  178  ---VVVPAFIISELKSAFEMGFLIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILL  234
               + +PAF++SEL+++FE+GFLIY+PF++ID++V+++L+++GM M++P+ ISLP+K+LL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  235  FILVDGWNLVVESL  248
            F+LV GW+ +++SL
Sbjct  199  FVLVSGWSRLLDSL  212

253) fliP in NC_021237


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (363),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 145/205 (71%), Gaps = 16/205 (7%)

Query  49   LIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVF  108
            L++ +LS+IP ++++ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  109  ----DRVNQDALQPYLAEKLTAQDAVAKAQVPIKDFMLAQTRSSDLELFMRLSKRTDIAS  164
                +RV++++L+   A+KL  Q ++     P++ FM   TR++D ++  +L   T+   
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  165  PDQ-------APLTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSP  217
            P +         L + +PAFV SEL+++F+IGF+I+IPF++IDL+V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  218  LIISLPFKIMLFVLVDGWALIIGTL  242
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

254) fliP in NC_004129


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (363),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 145/205 (71%), Gaps = 16/205 (7%)

Query  49   LIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVF  108
            L++ +LS+IP ++++ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  109  ----DRVNQDALQPYLAEKLTAQDAVAKAQVPIKDFMLAQTRSSDLELFMRLSKRTDIAS  164
                +RV++++L+   A+KL  Q ++     P++ FM   TR++D ++  +L   T+   
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  165  PDQ-------APLTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSP  217
            P +         L + +PAFV SEL+++F+IGF+I+IPF++IDL+V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  218  LIISLPFKIMLFVLVDGWALIIGTL  242
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

255) fliP in NC_010501


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  55   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQVLTGMALFLTMFIMAPVF  114
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  115  ----DRVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  170
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  171  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  223
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  224  LIISLPFKIMLFVLVDGWALIMGTL  248
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

256) YSA_08109 in NC_017986


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (361),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLNGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----ERVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

257) fliP in NC_009512


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =  100 bits (361),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLNGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----ERVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

258) fliP in NC_017530


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLTGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----DRVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

259) fliP in NC_018220


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLTGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----DRVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

260) fliP in NC_010322


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLTGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----DRVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

261) L483_24060 in NC_021491


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----DRVNQDALQPYLKEQMTAQQAIDKAQVPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

262) fliP in NC_019905


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLTGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----DRVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

263) fliP in NC_002947


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  51   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLTGMALFLTMFIMAPVF  110
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  111  ----DRVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  166
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  167  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  219
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  220  LIISLPFKIMLFVLVDGWALIMGTL  244
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

264) PPS_3758 in NC_015733


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 144/205 (71%), Gaps = 16/205 (7%)

Query  52   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQLLTGMALFLTMFIMAPVF  111
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  112  ----DRVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  167
                +RV++++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  168  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  220
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  221  LIISLPFKIMLFVLVDGWALIMGTL  245
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

265) fliP in NC_007005


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 143/205 (70%), Gaps = 16/205 (7%)

Query  50   LIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQAPSNQILTGMALFLTMFIMAPVF  109
            L++ +LS+IP ++++ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  110  ----DRVNQDALQPYLAEKLSAQDAVAKAQVPIKDFMLAQTRTSD-------LELFMRLS  158
                +RV++++L+   A+KL  Q ++     P++ FM   TR +D       LE   R+ 
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  159  KRTDIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSP  218
             +     +    L + +PAFV+SEL+++F+IGF+I+IPF++IDL+V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  219  LIISLPFKIMLFVLVDGWALIVGTL  243
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

266) fliP in NC_004578


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.6 bits (359),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 143/205 (70%), Gaps = 16/205 (7%)

Query  50   LIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVF  109
            L++ +LS+IP ++++ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  110  ----DRVNQDALQPYLAEKLTAQDAVAKAQVPIKDFMLAQTRTSD-------LELFMRLS  158
                +RV++++L+   A+KL  Q ++     P++ FM   TR +D       LE   R+ 
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  159  KRTDIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSP  218
             +     +    L + +PAFV+SEL+++F+IGF+I+IPF++IDL+V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  219  LIISLPFKIMLFVLVDGWALIVGTL  243
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

267) fliP in NC_017390


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 87/207 (43%), Positives = 139/207 (68%), Gaps = 15/207 (7%)

Query  50   LSSLTFLPAVLLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLALFLTFYVMSPVFNQ  109
            L+SL+++P +L++ T+F +I + L + RNA+G    PPN  L G+AL  T +VM+PV ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  110  IYQQAW-QPLQ-EDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQIAKAGEFKGPEEV  167
            I Q+   +PL+      ++ +L   + PL+ FM   TR+ D  + A++    +   P E+
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEM  131

Query  168  P-------LGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIA  220
            +       L + +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TI+
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  221  LPFKLMLFVLVDGWQLLMGSLAQSFYS  247
            LP+KL+LFVLV GW  L++SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

268) fliP in NC_012214


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 87/207 (43%), Positives = 139/207 (68%), Gaps = 15/207 (7%)

Query  50   LSSLTFLPAVLLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLALFLTFYVMSPVFNQ  109
            L+SL+++P +L++ T+F +I + L + RNA+G    PPN  L G+AL  T +VM+PV ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  110  IYQQAW-QPLQ-EDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQIAKAGEFKGPEEV  167
            I Q+   +PL+      ++ +L   + PL+ FM   TR+ D  + A++    +   P E+
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEM  131

Query  168  P-------LGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIA  220
            +       L + +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TI+
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  221  LPFKLMLFVLVDGWQLLMGSLAQSFYS  247
            LP+KL+LFVLV GW  L++SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

269) D782_1687 in NC_020063


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 88/216 (41%), Positives = 144/216 (67%), Gaps = 19/216 (8%)

Query  41   PVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFI  100
            P+   +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  101  MSPVI----DKIYTDAYQPFSEDKISLQEAMDKGSQPLREFMLRQTREADLALFARLANS  156
            M+PV     +++  ++ +  S DK  LQ ++    +PL+ FM   TR++D  + A+L ++
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLEN  122

Query  157  A----PIEGPEAVPLRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGM  209
            +    P E ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM
Sbjct  123  TQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM  182

Query  210  MMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             MV+P TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  183  QMVSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

270) fliP in NC_011601


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 86/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGVFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D +V A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

271) Ser39006_3174 in NC_022268


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 90/215 (42%), Positives = 139/215 (65%), Gaps = 17/215 (7%)

Query  56   PIQTLVFLTSLTFIPSVLLLMTSFTRIIIVLSLLRNALGTPTAPPNQVLLGLSLFLTFFI  115
            PI   +FL SL++IP +L++ T+F +I + L + RNA+G    PPN  L G++L  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  116  MSPVLNRIYQDAY---LPFSENKINMEVAIDKGAKPLREFMLRQTRETDLALFTRLAEIP  172
            M+PV + I Q      L ++    +++ ++     PL+ FM   TR+TD  + ++L E  
Sbjct  68   MAPVAHDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENT  123

Query  173  ----SLEGPESVPMRVL---VPAYVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMM  225
                + E ++      L   +PA+V SEL+++F+IGF I+IPF++IDL+V+++L+ALGM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  226  MVPPATISLPFKLMLFVLVDGWQLLLGSLAQSFYS  260
            MV+P TISLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

272) fliP in NC_006177


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 127/191 (67%), Gaps = 6/191 (3%)

Query  63   PAIIILCTSFTRIIVVFGFIRTALGLQQTPPNQVLIGLALFLTAAVMMPTFSEINQTAVQ  122
            P ++I+CT+F +I + + + R A+G+QQ PPN  L G+AL  T  VM P   +I+Q   +
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  123  PYLA-GEIDQVEAIERGAL-PLKAFMLRQTREADLGLMLEVSGQ----PAPEGPEDVSFL  176
              L  G  D++++  R  + PL+ FM R+T    ++ +LE + +      ++ +    +L
Sbjct  82   HPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  177  TVVPAFALSELKTAFTMGFLIYLPFIIIDLITASLMMSLGMMMVPPTLISLPFKVLLFVL  236
              +PAF +SEL+++F +GFLIY+PFI+IDLI ++L+++LGM MV+P  ISLP+K+LLFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  237  VDGWHLVVESL  247
            V GW  +++SL
Sbjct  202  VSGWSRLLDSL  212

273) fliP in NC_014228


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 86/211 (41%), Positives = 136/211 (65%), Gaps = 11/211 (5%)

Query  68   PVQTLIFITALGFIPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFMTFFI  127
            P+   +F+ +L++IP  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  128  MAPVFDKVYQDAY---LPYNEDKITLEAALDKGSKPLRQFMLRQTRENDLALF----ARL  180
            MAPV + + Q      L        L+++L     PL++FM R+T  + +A +     R+
Sbjct  68   MAPVAHDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRM  126

Query  181  ADQEAFETADSVPLRVLVPAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVP  240
              +E  + A    L + +PAF+ SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+
Sbjct  127  WPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVS  186

Query  241  PATISLPFKLMLFVLVDGWQLLLGSLAQSFY  271
            P TISLP+KL+LFVLV GW  LL+SL   FY
Sbjct  187  PMTISLPLKLLLFVLVSGWSRLLDSL---FY  214

274) fliP in NC_005773


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score =   99 bits (360),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 143/205 (70%), Gaps = 16/205 (7%)

Query  50   LIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVF  109
            L++ +LS+IP ++++ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  110  ----DRVNQDALQPYLAEKLSAQDAVAKAQVPIKDFMLAQTRTSD-------LELFMRLS  158
                +RV++++L+   A+KL  Q ++     P++ FM   TR +D       LE   R+ 
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  159  KRTDIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSP  218
             +     +    L + +PAFV+SEL+++F+IGF+I+IPF++IDL+V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  219  LIISLPFKIMLFVLVDGWALIVGTL  243
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

275) fliP in NC_013971


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 86/207 (42%), Positives = 139/207 (68%), Gaps = 15/207 (7%)

Query  50   LSSLTFLPAILLMMTGFTRIIIVLGLMRNALGTPTSPPNQVLVGLALFLTFYVMSPVFNQ  109
            L+SL+++P +L++ T+F +I + L + RNA+G    PPN  L G+AL  T +VM+PV ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  110  IYEQAW-QPLQ-EDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQMAKAGEFKGPEEV  167
            I ++   +PL+      ++ +L   + PL+ FM   TR+ D  + A++    +   P E+
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEM  131

Query  168  P-------LGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIA  220
            +       L + +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TI+
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  221  LPFKLMLFVLVDGWQLLMGSLAQSFYS  247
            LP+KL+LFVLV GW  L++SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

276) fliP3 in NC_013961


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 86/207 (42%), Positives = 139/207 (68%), Gaps = 15/207 (7%)

Query  50   LSSLTFLPAILLMMTGFTRIIIVLGLMRNALGTPTSPPNQVLVGLALFLTFYVMSPVFNQ  109
            L+SL+++P +L++ T+F +I + L + RNA+G    PPN  L G+AL  T +VM+PV ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  110  IYEQAW-QPLQ-EDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQMAKAGEFKGPEEV  167
            I ++   +PL+      ++ +L   + PL+ FM   TR+ D  + A++    +   P E+
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEM  131

Query  168  P-------LGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIA  220
            +       L + +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TI+
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  221  LPFKLMLFVLVDGWQLLMGSLAQSFYS  247
            LP+KL+LFVLV GW  L++SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

277) fliP in NC_014355


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 80/196 (41%), Positives = 135/196 (69%), Gaps = 7/196 (3%)

Query  66   ILALF-TVLSLAPALFIMVTSFTRMVIVLSFLRQAMGTQQVPPNQVLISLALFLTMFVMA  124
            +LALF   LSL P L+I+ T+F ++ + L + R+A+G QQVPPN  L ++AL  TMFVMA
Sbjct  10   MLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMA  69

Query  125  PVGQAVYKDAL-QPL-LAEQIGYEDAWNRGIQPIRAFMLKQMRDKDLELFMELSHA--PK  180
            PV++ + +    +PL L+     + +    I+P++ FM ++     +  ++E ++   PK
Sbjct  70   PVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPK  129

Query  181  --ATQVEQVPIHVIIPAFVLSELRIAFQIGFLLYIPFLIVDMVVASVLMSMGMMLLPPVM  238
              A Q  +  + + IPAFV+SEL+ +F+IGFL+YIPF+++D++V+++L+++GM +++P+ 
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  239  ISLPFKLILFVLADGW  254
            ISLP+KL+LFVL  GW
Sbjct  190  ISLPLKLLLFVLVSGW  205

278) fliP in NC_021505


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 143/205 (70%), Gaps = 16/205 (7%)

Query  55   LIMTALSFIPAFVILMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTMFIMAPVF  114
            L++ +LS+IP ++I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  TMF+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  115  ----DRVNSDALQPYLKEQMTAQQAIDKAQVPLKDFMLAQTRQSDLDLFMRLSKRTDIAG  170
                +RV+ ++L+  L      Q ++     PL+ FM   TR++D D+  +L   T+   
Sbjct  73   HDIQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  171  PDQVP-------LTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSP  223
            P +++       L + +PAFV SEL+++F+IGF+I+IPF++ID++V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  224  LIISLPFKIMLFVLVDGWALIMGTL  248
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

279) Bmul_3754 in NC_010086


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 84/198 (43%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+GVQQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   S+  + +   + + P++ F+  +T       ++  +  +WPK+ AD    D
Sbjct  82   HPLELG---SADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KLLL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

280) yscR in NC_010805


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 84/198 (43%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+GVQQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   S+  + +   + + P++ F+  +T       ++  +  +WPK+ AD    D
Sbjct  82   HPLELG---SADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KLLL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

281) Bcen_3526 in NC_008061


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   S+  + +   + + P++ F+  +T       ++  +  +WPK+ AD    D
Sbjct  82   HPLELG---SADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KLLL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

282) Bcen2424_4840 in NC_008543


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   S+  + +   + + P++ F+  +T       ++  +  +WPK+ AD    D
Sbjct  82   HPLELG---SADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KLLL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

283) bcscR in NC_011001


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   S+  + +   + + P++ F+  +T       ++  +  +WPK+ AD    D
Sbjct  82   HPLELG---SADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KLLL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

284) Bcenmc03_5444 in NC_010515


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 83/198 (42%), Positives = 139/198 (71%), Gaps = 3/198 (1%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFDASGQLSTSDIGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDD  140
            + ++ +   S+  + +   + + P++ F+  +T       ++  +  +WPK+ AD    D
Sbjct  82   HPLELG---SADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  141  DLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKLLL  200
            DLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KLLL
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  201  FVALDGWSLLVHGLVLSY  218
            FV + GWS L+++L  SY
Sbjct  199  FVLVSGWSRLLDSLFYSY  216

285) fliP in NC_009800


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 85/210 (41%), Positives = 141/210 (68%), Gaps = 19/210 (9%)

Query  47   FITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI-  105
            F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV  
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  106  ---DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----P  158
               +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      P
Sbjct  74   DIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWP  128

Query  159  LQGPEAVPMRILL---PAYVISELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPA  215
             + ++      LL   PA+V+SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P 
Sbjct  129  KEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  188

Query  216  TIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  189  TISLPLKLLLFVLVSGWSRLLDSL---FYS  215

286) fliP in NC_004337


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 85/210 (41%), Positives = 140/210 (67%), Gaps = 19/210 (9%)

Query  6    FITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI-  64
            F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV  
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  65   ---DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----P  117
               +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      P
Sbjct  74   DIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWP  128

Query  118  LQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPA  174
             + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P 
Sbjct  129  KEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  188

Query  175  TIALPFKLMLFVLVDGWQLLVGSLAQSFYS  204
            TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  189  TISLPLKLLLFVLVSGWSRLLDSL---FYS  215

287) fliP in NC_007492


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 142/205 (70%), Gaps = 16/205 (7%)

Query  50   LIMTALSFIPAAVILMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTLFIMAPVF  109
            L++ +LS+IP  +I+ T+F +I + + I R+A+G+QQ P+N  L G+AL  T+F+MAPV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  110  ----DRVNNDALQPYLAEKLTAQQAVEKAQVPIKDFMLAQTRSSD-------LELFVRLS  158
                +RV++++L+   A+KL  Q ++     P++ FM   TR++D       LE   R+ 
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  159  KRTDIATPDAAPLTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSP  218
             +     +    L + +PAFV SEL+++F+IGF+I+IPF++IDL+V+++L+A+GM M+SP
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  219  LIISLPFKIMLFVLVDGWALIIGTL  243
            + ISLP+K++LFVLV GW+ ++++L
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL  212

288) Dd703_1550 in NC_012880


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 86/207 (42%), Positives = 139/207 (68%), Gaps = 15/207 (7%)

Query  57   LTSLTFIPAVLLMMTSFTRIIIVLGLLRSALGTPTAPPNQILIGLSLFLTFFIMSPVLTK  116
            L SL++IP +L++ T+F +I + L + R+A+G    PPN  L G++L  T F+M+PV   
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  117  VYQDAY-QPFS-ENKINMETAIERGSQPLRQFMLRQTRETDLALFARLAEIS------AL  168
            + Q    +P+   +  +++T++    +PL++FM   TR+TD  + A+L E +       +
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEM  131

Query  169  SGPEAVPMRVL-VPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATVS  227
            ++  +    +L +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P T+S
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  228  LPFKLMLFVLVDGWQLLLSSLVQSFYS  254
            LP+KL+LFVLV GW  LL SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

289) fliP in NC_017445


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/207 (42%), Positives = 139/207 (68%), Gaps = 15/207 (7%)

Query  50   LSSLTFLPAVLLMMTGFTRIIIVLGLMRNALGTPTAPPNQVLVGLALFLTFYVMSPVFNQ  109
            L+SL+++P +L++ T+F +I + L + RNA+G    PPN  L G+AL  T +VM+PV ++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  110  IYEQAW-QPLQ-EDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQIAKAGEFKGPEEV  167
            I ++   +PL+      ++ +L   + PL+ FM   TR+ D  + A++    +   P E+
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEM  131

Query  168  P-------LGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIA  220
            +       L + +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TI+
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  221  LPFKLMLFVLVDGWQLLMGSLAQSFYN  247
            LP+KL+LFVLV GW  L++SL   FY+
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

290) fliP in NC_009708


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 75/185 (41%), Positives = 127/185 (69%), Gaps = 10/185 (5%)

Query  74   TCFTRFIIVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQ---DAVIPFQQ  130
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   I+Q   D  + +  
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  131  DEITLSQALGRAEVPLKNYMLAQTSTKSLDQMMAIAQ------VSGEPQQQDLSVVTPAY  184
             +  L  +L     PL+ +M  +T    + +++  +Q      +++++ ++DL +  PA+
Sbjct  89   AD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAF  147

Query  185  VLSELKTAFQIGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTL  244
            V+SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL  GW+ 
Sbjct  148  VMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSR  207

Query  245  MVGTL  249
            ++++L
Sbjct  208  LLDSL  212

291) Bamb_4215 in NC_008391


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/200 (43%), Positives = 141/200 (71%), Gaps = 7/200 (3%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQS  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFD--ASGQLSTSDIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIK  138
            + ++  ++++L TS       + + P++ F+  +T       ++  +  +WPK+ AD   
Sbjct  82   HPLELGSADKLQTS-----LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  139  DDDLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKL  198
             DDLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  199  LLFVALDGWSLLVHGLVLSY  218
            LLFV + GWS L+++L  SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

292) BamMC406_4737 in NC_010552


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/200 (43%), Positives = 141/200 (71%), Gaps = 7/200 (3%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQS  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFD--ASGQLSTSDIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIK  138
            + ++  ++++L TS       + + P++ F+  +T       ++  +  +WPK+ AD   
Sbjct  82   HPLELGSADKLQTS-----LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  139  DDDLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKL  198
             DDLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  199  LLFVALDGWSLLVHGLVLSY  218
            LLFV + GWS L+++L  SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

293) MYA_4948 in NC_017921


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/200 (43%), Positives = 141/200 (71%), Gaps = 7/200 (3%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFD--AAGQLSTADIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIK  138
            + ++  +A++L T+       + + P++ F+  +T       ++  +  +WPK+ AD   
Sbjct  82   HPLELGSADKLQTS-----LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  139  DDDLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKL  198
             DDLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  199  LLFVALDGWSLLVHGLVLSY  218
            LLFV + GWS L+++L  SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

294) Bcep1808_5328 in NC_009255


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/200 (43%), Positives = 141/200 (71%), Gaps = 7/200 (3%)

Query  21   PFAALMVTSYTKLVVVLGLLRSALGIQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA  80
            PF  ++ T++ K+ + L + R+A+G+QQVPPN+ L GIAL  ++F+MAPV+  I++ ++ 
Sbjct  22   PFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHD  81

Query  81   RHFD--AAGQLSTADIGVLADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIK  138
            + ++  +A++L T+       + + P++ F+  +T       ++  +  +WPK+ AD   
Sbjct  82   HPLELGSADKLQTS-----LRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  139  DDDLLVLVPSFTLAELTKAfqigfviyivfivvDLLVANILLALGMQMISPTTISVPFKL  198
             DDLL+ +P+F ++EL  +F+IGF+IYI FIV+DL+V+N+LLALGMQM+SP TIS+P+KL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  199  LLFVALDGWSLLVHGLVLSY  218
            LLFV + GWS L+++L  SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

295) fliP in NC_017626


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

296) fliP in NC_008253


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

297) fliP in NC_011748


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

298) fliP in NC_017631


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

299) fliP in NC_020163


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

300) fliP in NC_010468


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

301) fliP in NC_012947


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

302) fliP in NC_012759


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

303) fliP in NC_004431


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

304) fliP in NC_017652


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

305) fliP in NC_017651


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

306) EcDH1_1700 in NC_017625


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

307) fliP in NC_017638


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

308) fliP in NC_009801


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

309) fliP in NC_011745


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

310) ETEC_2051 in NC_017633


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

311) fliP in NC_011741


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

312) fliP in NC_011750


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

313) fliP in NC_010473


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

314) fliP in NC_000913


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

315) fliP in NC_007779


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

316) fliP in NC_017660


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

317) EKO11_1826 in NC_016902


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

318) fliP in NC_011993


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

319) fliP in NC_022364


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

320) fliP in NC_017644


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

321) fliP in NC_013353


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

322) fliP in NC_018650


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

323) fliP in NC_018661


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

324) fliP in NC_018658


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

325) fliP in NC_013364


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

326) fliP in NC_011353


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

327) fliP in NC_002655


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

328) fliP in NC_002695


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

329) fliP in NC_013008


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

330) fliP in NC_013361


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

331) fliP in NC_013941


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

332) fliP in NC_017656


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

333) fliP in NC_017646


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

334) fliP in NC_017634


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

335) fliP in NC_017663


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

336) fliP in NC_011415


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

337) ECSF_1800 in NC_013654


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

338) fliP in NC_010498


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

339) fliP in NC_011751


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

340) fliP in NC_017635


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

341) fliP in NC_017664


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

342) fliP in NC_017906


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

343) fliP in NC_010658


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

344) fliP in NC_008258


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D ++ A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

345) Calow_1847 in NC_014657


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 79/195 (41%), Positives = 131/195 (68%), Gaps = 12/195 (6%)

Query  63   VPSILIMMTSFTRILIVLGFVRNALGTQQMPPNQILIGLALFLTFFVMAPVTDKIYTQAY  122
            +P +LI+ T+F +I + L + RNA+G QQ+PPN  L G+AL  T FVMAPV++ I  +  
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  123  -QPYINGEITS-QEALKRAEVPLKEFMLKNTRKKDLDLFVKLGNVNPNTNIRDLP-----  175
             +P   G     Q +L+    PL+ FM   TR+ D D+   L +       ++++     
Sbjct  81   DHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  176  --LRVVVPAFIISELKSAFEMGFLIYVPFLIIDMTVASILMSMGMLMIPPVMISLPFKIL  233
              L + +PAF++SEL+++FE+GFLIY+PF++ID+ V+++L+++GM M++P+ ISLP+K+L
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  234  LFILVDGWNLVVESL  248
            LF+LV GW+ +++SL
Sbjct  198  LFVLVSGWSRLLDSL  212

346) fliP in NC_013716


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVEAYQPFSEEKISMQEALDKGAQPLREFMLRQTREADLALFARLANSG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D  + A+L ++     
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

347) fliP in NC_011740


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 140/211 (67%), Gaps = 19/211 (9%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLALFARLANTG----  157
                +++  ++ +  S +K  +Q +L    +PL+ FM   TR++D  + A+L +      
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  158  PIQGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPP  214
            P + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  215  ATIALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
             TI+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

348) fliP in NC_018405


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 85/210 (41%), Positives = 138/210 (66%), Gaps = 17/210 (8%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  ----DKIYTDAYQPFSEDKISMQEALDKGAQPLREFMLRQTREADLALFVRLSNTGEL--  159
                +++  ++ +  S DK  +Q +L    +PL+ FM R+T    +A +  L NT  +  
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFMTRNTDPDVVAHL--LENTQRMWP  128

Query  160  -QGPEAVPMRVLL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPA  215
             + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P 
Sbjct  129  KEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  188

Query  216  TIALPFKIMLFVLVDGWQLLVSSLAQSFYS  245
            TI+LP+K++LFVLV GW  L+ SL   FYS
Sbjct  189  TISLPLKLLLFVLVSGWSRLLDSL---FYS  215

349) fliP in NC_008563


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 138/209 (67%), Gaps = 15/209 (7%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFN-EEKISMQEALEKGEQPLREFMLRQTREADLGLFARLANTG----PL  159
            + I      +P++      +Q +L    +PL+ FM   TR++D ++ A+L +      P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

350) fliP in NC_017628


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 138/209 (67%), Gaps = 15/209 (7%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFN-EEKISMQEALEKGEQPLREFMLRQTREADLGLFARLANTG----PL  159
            + I      +P++      +Q +L    +PL+ FM   TR++D ++ A+L +      P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

351) fliP in NC_022370


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 138/209 (67%), Gaps = 15/209 (7%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFN-EEKISMQEALEKGEQPLREFMLRQTREADLGLFARLANTG----PL  159
            + I      +P++      +Q +L    +PL+ FM   TR++D ++ A+L +      P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

352) fliP in NC_011742


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 138/209 (67%), Gaps = 15/209 (7%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFN-EEKISMQEALEKGEQPLREFMLRQTREADLGLFARLANTG----PL  159
            + I      +P++      +Q +L    +PL+ FM   TR++D ++ A+L +      P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

353) fliP in NC_017632


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 138/209 (67%), Gaps = 15/209 (7%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFN-EEKISMQEALEKGEQPLREFMLRQTREADLGLFARLANTG----PL  159
            + I      +P++      +Q +L    +PL+ FM   TR++D ++ A+L +      P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

354) fliP in NC_007946


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 138/209 (67%), Gaps = 15/209 (7%)

Query  46   VFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFN-EEKISMQEALEKGEQPLREFMLRQTREADLGLFARLANTG----PL  159
            + I      +P++      +Q +L    +PL+ FM   TR++D ++ A+L +      P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

355) fliP in NC_015663


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.5 bits (351),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 87/208 (42%), Positives = 136/208 (66%), Gaps = 17/208 (8%)

Query  56   LTSLTFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  115
            L SL+++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  116  VYQEAY---LPFSQDKIGLDTALDKGAQPLREFMLRQTRESDLALYARLANQP----PLA  168
            + Q      L ++     L+T+L    +PL+ FM   TR++D  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  169  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  225
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  226  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  253
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

356) SerAS12_3042 in NC_015566


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 136/208 (66%), Gaps = 17/208 (8%)

Query  44   LTSLSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  103
            L SLS++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  104  VYQDAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLA  156
            + Q      L ++     L+++L    +PL+ FM   TR+TD  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  157  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  213
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  214  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  241
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

357) SerAS13_3044 in NC_017573


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 136/208 (66%), Gaps = 17/208 (8%)

Query  44   LTSLSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  103
            L SLS++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  104  VYQDAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLA  156
            + Q      L ++     L+++L    +PL+ FM   TR+TD  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  157  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  213
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  214  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  241
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

358) fliP in NC_021591


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 136/208 (66%), Gaps = 17/208 (8%)

Query  44   LTSLSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  103
            L SLS++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  104  VYQDAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLA  156
            + Q      L ++     L+++L    +PL+ FM   TR+TD  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  157  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  213
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  214  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  241
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

359) SerAS9_3041 in NC_015567


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 136/208 (66%), Gaps = 17/208 (8%)

Query  44   LTSLSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  103
            L SLS++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  104  VYQDAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLA  156
            + Q      L ++     L+++L    +PL+ FM   TR+TD  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  157  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  213
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  214  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  241
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

360) fliP in NC_021659


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 136/208 (66%), Gaps = 17/208 (8%)

Query  44   LTSLSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  103
            L SLS++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  104  VYQDAY---LPFSQDKISLDAALDKGSQPLREFMLRQTRETDLALYARLANQP----PLA  156
            + Q      L ++     L+++L    +PL+ FM   TR+TD  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  157  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  213
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  214  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  241
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

361) fliP in NC_013282


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 137/208 (66%), Gaps = 13/208 (6%)

Query  24   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  83
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  84   DKIYSDAY-QPFT-ENKISMEVALDRGAQPLREFMLRQTREADLALFAKLANTQ---PIQ  138
            + I      +P+   +   ++ +L    +PL+ FM R+T    +A +  L NTQ   P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHL--LENTQRMWPKE  130

Query  139  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASI  195
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +I
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  196  ALPFKLMLFVLVDGWQLLVGSLAQSFYS  223
            +LP+KL+LFVLV GW  L++SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

362) ST548_p6298 in NC_020181


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.3 bits (350),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 136/208 (66%), Gaps = 17/208 (8%)

Query  56   LTSLTFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLTLFLTFFIMSPVFDK  115
            L SL+++P +L++ T+F +I + L + RNA+G    PPN  + G++L  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  116  VYQEAY---LPFSQDKIGLDTALDKGAQPLREFMLRQTRESDLALYARLANQP----PLA  168
            + Q      L ++     L+T+L    +PL+ FM   TR++D  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  169  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  225
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  226  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  253
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

363) fliP in NC_014500


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 91/213 (43%), Positives = 141/213 (67%), Gaps = 13/213 (6%)

Query  54   PIQTLVFITSLSFIPAVLLMMTCFTRIIIVLSLLRNALGTPTAPPNQVLLGLSLFLTFFV  113
            PI   +F+ SLS+IP +L++ T F +I + L + RNA+G    PPN  L G++L  T FV
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  114  MSPVLN----RIYDEAYRPFSEDKISMEVAIEKGSQPLREFMLRQTREADLA-LFTRLAQ  168
            M+PV +    R+ D++    S DK  ++ ++    +PL+ FM R+T    +A L+    +
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  169  I-PSLQGPEAVPMRVL--VPAYVTSELKTAFQIGFTIFIPFLLIDLVVASVLMALGMMMV  225
            + P   + +A    +L  +PA+V SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  226  PPATISLPFKLMLFVLVDGWQLLLGSLAQSFYT  258
            +P TISLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

364) fliP in NC_021820


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

365) fliP in NC_016856


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

366) fliP in NC_017046


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

367) STMMW_19591 in NC_016854


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

368) fliP in NC_003197


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

369) fliP in NC_016810


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

370) fliP in NC_016857


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

371) fliP in NC_016860


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

372) fliP in NC_021151


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

373) fliP in NC_016863


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

374) fliP in NC_021814


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLMGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

375) fliP in NC_012559


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 83/199 (42%), Positives = 140/199 (71%), Gaps = 13/199 (6%)

Query  59   IPALLLMMTAFTRIVIVLSLLRQAIGLMQSPPNQVIVGLSLFLTLFVMAPV---FDQAYR  115
            IP LL++ TAF +I + L + R+AIG+ Q PPN  + G++L  T+FVMAPV   ++Q  +
Sbjct  21   IPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH  80

Query  116  EAWLPYSDSQMNFMQAAEKGV-QPFKGFMLKQTREKDLAFFVEIAREA-PPATPADVSLK  173
            +  L  + ++   +Q++ + V +P++ FM ++T    +A ++E ++   P   + + +  
Sbjct  81   DHPLELGSADK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKD  138

Query  174  TL---IPAFVVSELKTAFQIGFMVFIPFLIIDLVVASVLMAMGMMMVSPVIISLPFKLML  230
             L   IPAFV+SEL+++F+IGF+++IPF++IDL+V+++L+A+GM MVSP+ ISLP+KL+L
Sbjct  139  DLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLL  198

Query  231  FVLVDGWTLLIGSLVQSFY  249
            FVLV GW+ L++SL   FY
Sbjct  199  FVLVSGWSRLLDSL---FY  214

376) Dd1591_1566 in NC_012912


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 89/213 (42%), Positives = 141/213 (67%), Gaps = 13/213 (6%)

Query  54   PIQTLVFITALSFIPAVLLMMTCFTRIIIVLSLLRNALGTPTAPPNQVLLGLSLFLTFFV  113
            PI   +F+ +LS+IP +L++ T F +I + L + RNA+G    PPN  L G++L  T FV
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  114  MSPVLN----RIYDEAYRPFSEDKISMEVAIDKGSQPLREFMLRQTREADLA-LFTRLAQ  168
            M+PV +    R+ D++    S DK  ++ ++    +PL+ FM R+T    +A L+    +
Sbjct  68   MAPVAHDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  169  I-PSLQGPEAVPMRVL--VPAYVTSELKTAFQIGFTIFIPFLLIDLVVASVLMALGMMMV  225
            + P   + +A    +L  +PA+V SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  226  PPATIALPFKLMLFVLVDGWQLLLGSLAQSFYT  258
            +P TI+LP+KL+LFVLV GW  LL+SL   FY+
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

377) fliP in NC_022000


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 14/209 (6%)

Query  52   PVQTLIFITALGFIPAVLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVVLGLALFMTFFI  111
            P+   +F+ +L++IP +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  112  MAPVFDKIYQDAY---LPFSEDKITFEQALDNGSQPLRQFMMQQTRETDLALFARLADAP  168
            MAPV + I Q      L ++     ++ +L    +PL++FM   TR+TD  + A+L +  
Sbjct  68   MAPVAHDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENT  123

Query  169  ----AFETRDSVPMRIL---VPAYITSELKTAFQIGFMIFIPFLIIDLVVASVLMALGMM  221
                + E  D      L   +PA++ SEL+++F+IGF+I+IPF++IDL+V+++L+ALGM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  222  MVPPATVSLPFKLMLFVLVDGWQLILGSL  250
            MV+P T+SLP+KL+LFVLV GW  +L+SL
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSL  212

378) fliP in NC_010554


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 14/209 (6%)

Query  52   PVQTLIFITALGFIPAVLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVVLGLALFMTFFI  111
            P+   +F+ +L++IP +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  112  MAPVFDKIYQDAY---LPFSEDKITFEQALDNGSQPLRQFMMQQTRETDLALFARLADAP  168
            MAPV + I Q      L ++     ++ +L    +PL++FM   TR+TD  + A+L +  
Sbjct  68   MAPVAHDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENT  123

Query  169  ----AFETRDSVPMRIL---VPAYITSELKTAFQIGFMIFIPFLIIDLVVASVLMALGMM  221
                + E  D      L   +PA++ SEL+++F+IGF+I+IPF++IDL+V+++L+ALGM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  222  MVPPATVSLPFKLMLFVLVDGWQLILGSL  250
            MV+P T+SLP+KL+LFVLV GW  +L+SL
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSL  212

379) fliP in NC_015761


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 136/208 (66%), Gaps = 15/208 (7%)

Query  47   FITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID  106
            F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  107  KIYVDAY-QPFS-EQKISMQEALEKGAQPLRAFMLRQTREADLALFARLANSG----PLQ  160
             I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P +
Sbjct  74   DIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  161  GPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATI  217
             ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  218  ALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            +LP+KL+LFVLV GW  L++SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

380) A464_2127 in NC_021870


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 136/208 (66%), Gaps = 15/208 (7%)

Query  47   FITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID  106
            F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  107  KIYVDAY-QPFS-EQKISMQEALEKGAQPLRAFMLRQTREADLALFARLANSG----PLQ  160
             I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P +
Sbjct  74   DIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  161  GPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATI  217
             ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  218  ALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            +LP+KL+LFVLV GW  L++SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

381) fliP in NC_021810


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 136/208 (66%), Gaps = 15/208 (7%)

Query  47   FITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID  106
            F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  107  KIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PLQ  160
             I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P +
Sbjct  74   DIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  161  GPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATI  217
             ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  218  ALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            +LP+KL+LFVLV GW  L++SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

382) SU5_02582 in NC_017623


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 136/208 (66%), Gaps = 15/208 (7%)

Query  47   FITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID  106
            F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  107  KIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PLQ  160
             I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P +
Sbjct  74   DIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  161  GPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATI  217
             ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  218  ALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            +LP+KL+LFVLV GW  L++SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

383) fliP in NC_021812


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 136/208 (66%), Gaps = 15/208 (7%)

Query  47   FITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID  106
            F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  107  KIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PLQ  160
             I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P +
Sbjct  74   DIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  161  GPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATI  217
             ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  218  ALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            +LP+KL+LFVLV GW  L++SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

384) fliP in NC_011083


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 136/208 (66%), Gaps = 15/208 (7%)

Query  47   FITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID  106
            F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  107  KIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PLQ  160
             I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P +
Sbjct  74   DIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  161  GPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATI  217
             ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  218  ALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            +LP+KL+LFVLV GW  L++SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

385) fliP in NC_007348


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.8 bits (348),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 137/208 (66%), Gaps = 16/208 (7%)

Query  68   LTSLSFLPAAVLMMTGFTRIVIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPV---  124
            L SLS++P  +++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV   
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  125  -LDRVYNDAYKPLSENRISLETAMAKAAEPLKGFMLKQTREKDLAMFAQMAKAPE----M  179
              +RV +++    S ++  L+T++    EPL+ FM   TR+ D  + A++    +     
Sbjct  75   IQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  180  QGPEEVPMSIL---VPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPAT  236
            + +++     L   +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+A+GM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  237  ISLPFKLMLFVLVDGWQLLLGSLAQSFM  264
            ISLP+KL+LFVLV GW  LL+SL  S+M
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSLFYSYM  217

386) fliP in NC_020211


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 87/208 (42%), Positives = 135/208 (65%), Gaps = 17/208 (8%)

Query  56   LTSLTFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  115
            L SL+++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  116  VYQDAY---LPFSQDKIGLEVALDKGAQPLREFMLRQTRETDLALYARLANQP----PLA  168
            + Q      L ++     L+ +L    +PL+ FM   TR+TD  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  169  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  225
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  226  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  253
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

387) fliP in NC_011274


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.5 bits (347),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

388) fliP in NC_014306


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.5 bits (347),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 140/215 (66%), Gaps = 17/215 (7%)

Query  40   PVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFI  99
            P+   +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  100  MGPVFDKIYQDAY---LPFSQDKISMQDAIDKGAQPLREFMLRQTREADLALFARLSNSP  156
            M+PV + I Q      L ++     +Q ++    +PL+ FM   TR++D  + A+L ++ 
Sbjct  68   MAPVAHDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENT  123

Query  157  ----PLQGPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMM  209
                P + ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  210  MVPPATISLPFKLMLFVLVDGWSLLVSSLAQSFYS  244
            MV+P TISLP+KL+LFVLV GWS L+ SL   FYS
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

389) fliP in NC_021844


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.5 bits (347),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

390) fliP in NC_010102


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.5 bits (347),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

391) fliP in NC_018645


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 130/193 (68%), Gaps = 10/193 (5%)

Query  53   LTVLALAPAILILMTPFTRLIVVFHFLRQAIGTQSSPPNQVIVGLALFMTFFIIKPVAQE  112
            L  L+L P +LI+ T+F ++ + + + R+AIG Q  PPN  + G+AL  T F++ PVA++
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  113  IYQQSLNPYLE--REITYEKAFESAQVPIRKFLLLNTRESDIALFVKGA------DMKKP  164
            I Q+  +  LE       + ++ +   P+++F+  NT    +A ++  +      +M   
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  165  ETRDDVSLLVLIPAYVISELKTAFIIGFVLYIPFIVIDMVVASVLLAMGMMMLPPVMISL  224
             T+DD  LL+ IPA+V+SEL+++F IGF++YIPFIVID++V+++LLA+GM M++P+ ISL
Sbjct  135  ATKDD--LLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  225  PFKLMLFVLVDGW  237
            P+KL+LFVLV GW
Sbjct  193  PLKLLLFVLVSGW  205

392) fliP in NC_010067


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

393) fliP in NC_011149


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

394) SBOV20391 in NC_022241


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

395) fliP in NC_006905


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

396) fliP in NC_021818


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

397) fliP in NC_011205


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

398) fliP in NC_011294


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

399) fliP in NC_022221


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

400) fliP in NC_016831


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

401) fliP in NC_020307


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

402) fliP in NC_011080


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

403) SN31241_30780 in NC_021902


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

404) fliP in NC_012125


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

405) fliP in NC_021984


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

406) fliP in NC_011094


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

407) STY2187 in NC_003198


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

408) STBHUCCB_9660 in NC_016832


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

409) fliP in NC_021176


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

410) fliP in NC_004631


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 137/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLRAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL+ FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

411) Dd586_1528 in NC_013592


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 138/208 (67%), Gaps = 13/208 (6%)

Query  59   IFITALSFIPAVLLMMTCFTRIIIVLSLLRNALGTPTAPPNQVLLGLSLFLTFFVMSPVL  118
            +F+ +LS+IP +L++ T F +I + L + RNA+G    PPN  L G++L  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  119  N----RIYDEAYRPFSEDKISMEVAIDKGSKPLREFMLRQTREADLA-LFTRLAQI-PSL  172
            +    R+ D++    S DK  ++ ++     PL+ FM R+T    +A L+    ++ P  
Sbjct  73   HDIQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  173  QGPEAVPMRVL--VPAYVTSELKTAFQIGFTIFIPFLLIDLVVASVLMALGMMMVPPATI  230
             + +A    +L  +PA+V SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  231  SLPFKLMLFVLVDGWQLLLGSLAQSFYT  258
            SLP+KL+LFVLV GW  LL+SL   FY+
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

412) H650_09085 in NC_021500


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 86/206 (42%), Positives = 138/206 (67%), Gaps = 13/206 (6%)

Query  56   MTSLTFLPAILLMMTGFTRIVIVLGLLRNALGTASTPPNQVLLGLALFLTFFVMSPVLN-  114
            + SL+++P +L++ T+F +I + L + RNA+G    PPN  L G+AL  T FVM+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  115  ---RVYDEAWVPLSQDKISMEVALQKGSQPLRAFMLKQTREGDLA-LFSRIAK---AEQF  167
               RV D++    S DK  ++ +L+   +PL+ FM ++T  + +A L+    +    E  
Sbjct  75   IQQRVHDHPLELGSADK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  168  NTADDVPMSILVPAFVTSELKTGFQIGFTMFIPFLIIDLVVASVLMALGMMMVPPATISL  227
            + A    + + +PAFV SEL++GF+IGF ++IPF++IDL+V+++L+ALGM MV+P TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  228  PFKLMLFVLVDGWQLVIGSLAQSFFS  253
            P+KL+LFVLV GW  +++SL   F+S
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

413) fliP in NC_010645


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.4 bits (343),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 83/196 (43%), Positives = 130/196 (67%), Gaps = 15/196 (7%)

Query  68   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLVGIALFLTFYTMSPVFDKIYTEAY-QPL  126
            L++ T+F +I + L + R+A+G    PPN  L GIAL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  127  STGSIP-FETALERAGAPLHTFMLHQTRENDLALFANL-ANIPKI------EDPSKVPMR  178
              GS   ++T+L     PL+ FM   TR+ D  + A+L  N  ++      ++++K  + 
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  179  ILIPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVSLPFKLMLFVL  238
            + IPAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T+SLP+KL+LFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  239  ADGWNLLLGSLAKSFY  254
              GW+ LL+SL   FY
Sbjct  202  VSGWSRLLDSL---FY  214

414) fliP in NC_021741


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.4 bits (343),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 134/208 (65%), Gaps = 17/208 (8%)

Query  61   LTSLSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  120
            L SLS++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  121  VYQDAY---LPFSQDKISLDIALDKGSQPLREFMLRQTRETDLALYAKLANQP----PLA  173
            + Q      L ++     L+ +L    +PL+ FM   TR+TD  + A L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  174  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  230
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  231  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  258
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

415) M301_1012 in NC_014207


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.4 bits (343),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 128/193 (67%), Gaps = 9/193 (4%)

Query  72   LLMMTGFTRIIIVLSLLRQALGTQSAPPNQVMVGLALFLTFFVMSPVIDKIYVDAY-QPL  130
            L++ T+F +I + L + R+A+G Q  PPN  + G+AL  T FVM+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  131  S-ENKITMQEAMDKGAAPLKAFMMKQTREGDLA-LFVNMAKI---EKIETPDQVPLLVLV  185
               +   +Q ++     PL+ FM ++T  + +A L+ N  ++   E  + + +  LL+ +
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  186  PAFMTSELKTAFQIGFAIFIPFLIIDMVVASVLMAMGMMMVSPSIVSLPFKLMLFVLVDG  245
            PAF+ SEL+++F+IGF I+IPF++ID++V+++L+A+GM MVSP  +SLP+KL+LFVLV G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  246  WQLLLGSLVQSFY  258
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

416) fliP in NC_008150


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 132/206 (65%), Gaps = 11/206 (5%)

Query  48   FITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVFD  107
            F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  108  KVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEGP  163
             + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E +
Sbjct  74   DIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  164  EMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISL  220
            +      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +ISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  221  PFKLMLFVLVDGWQLLLGSLAQSFYS  246
            P+KL+LFVLV GW  LL+SL   FYS
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

417) fliP in NC_005810


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 132/206 (65%), Gaps = 11/206 (5%)

Query  48   FITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVFD  107
            F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  108  KVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEGP  163
             + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E +
Sbjct  74   DIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  164  EMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISL  220
            +      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +ISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  221  PFKLMLFVLVDGWQLLLGSLAQSFYS  246
            P+KL+LFVLV GW  LL+SL   FYS
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

418) fliP in NC_004088


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 132/206 (65%), Gaps = 11/206 (5%)

Query  48   FITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVFD  107
            F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  108  KVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEGP  163
             + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E +
Sbjct  74   DIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  164  EMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISL  220
            +      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +ISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  221  PFKLMLFVLVDGWQLLLGSLAQSFYS  246
            P+KL+LFVLV GW  LL+SL   FYS
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

419) fliP in NC_008149


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 132/206 (65%), Gaps = 11/206 (5%)

Query  48   FITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVFD  107
            F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  108  KVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEGP  163
             + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E +
Sbjct  74   DIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  164  EMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISL  220
            +      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +ISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  221  PFKLMLFVLVDGWQLLLGSLAQSFYS  246
            P+KL+LFVLV GW  LL+SL   FYS
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

420) fliP in NC_006155


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 84/206 (41%), Positives = 132/206 (65%), Gaps = 11/206 (5%)

Query  48   FITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVFD  107
            F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV +
Sbjct  14   FLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAH  73

Query  108  KVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEGP  163
             + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E +
Sbjct  74   DIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  164  EMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISL  220
            +      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +ISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  221  PFKLMLFVLVDGWQLLLGSLAQSFYS  246
            P+KL+LFVLV GW  LL+SL   FYS
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

421) D781_2730 in NC_020064


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 135/208 (65%), Gaps = 17/208 (8%)

Query  65   LTSLTFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLTLFLTFFIMSPVFDK  124
            L SL+++P +L++ T+F +I + L + RNA+G    PPN  + G++L  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  125  VYQDAY---LPFSQDKIALDVAMEKGAQPLREFMLRQTRETDLALYARLAHQP----PLA  177
            + Q      L ++     L+ ++    +PL+ FM   TR+TD  + A+L ++     P  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  178  GPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATI  234
             ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  235  SLPFKLMLFVLVDGWQLLLGSLAQSFYS  262
            SLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

422) fliP in NC_007963


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.9 bits (341),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 82/194 (43%), Positives = 126/194 (65%), Gaps = 19/194 (9%)

Query  66   TCFTRIIIVLSLLRTAIGTQSTPPNQVLLGLALFMTFFIMSPV----LDRVHEQAWVPFS  121
            T F +I + L + R AIG Q  PPN  L G+AL  T F+M+PV     +RVH+++    S
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  122  EERISLEQALEQGSQPFREFMFGQTRETDLALFARMADADEM-------QGPEDVPMRLL  174
             ++  L+ +L    +P++ FM   TR+TD  + A++ +  +        + +    + L 
Sbjct  89   ADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  175  IPAFLTSELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVD  234
            IPAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TISLP+KL+LFVLV 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  235  GWQLLIGSLAESFY  248
            GW  L++SL   FY
Sbjct  204  GWSRLLDSL---FY  214

423) Tmar_0992 in NC_014831


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.7 bits (340),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 81/190 (43%), Positives = 131/190 (69%), Gaps = 10/190 (5%)

Query  42   TGFTRIVVALSFLRSALGTQQAPPNQVLVGLALFLTVFVMAPVWQQVYQDAWVPYRDGQI  101
            T+F +I ++L + R+A+G QQ PPN  L G+AL  T+FVMAPV +++  + +V  +  ++
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDI--QQRVHDHPLEL  86

Query  102  GQVEALQRA----QQPVREFMFRYTRERDLALFLELSGRG-PVESRDQVPTYVL---IPA  153
            G  + LQ +     +P++ FM R T    +A +LE + R  P E  DQ     L   IPA
Sbjct  87   GSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPA  146

Query  154  FAISELKTAFQIGFILYVPFLVIDMVVASTLMSMGMLMVPPMLVSLPFKILLFVLVDGWN  213
            F +SEL+++F+IGF++Y+PF+VID++V++ L+++GM MV+PM +SLP+K+LLFVLV GW+
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  214  LVVRSLLASF  223
             ++ SL+ S+
Sbjct  207  RLLDSLFYSY  216

424) fliP in NC_009832


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.7 bits (340),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 85/205 (42%), Positives = 132/205 (65%), Gaps = 11/205 (5%)

Query  77   LTSLSFLPAMLLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDK  136
            L SLS++P +L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  137  VYQDAY---LPFSQDKISLDVAMDKGSQPLREFMLRQTRETDLA-LYAKLANLPPLAGPE  192
            + Q      L ++     L+ ++    +PL+ FM R+T    +A L  +   + P   ++
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMAD  133

Query  193  AVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLP  249
                  LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TISLP
Sbjct  134  QATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLP  193

Query  250  FKLMLFVLVDGWQLLLGSLAQSFYS  274
            +KL+LFVLV GW  LL+SL   FYS
Sbjct  194  LKLLLFVLVSGWSRLLDSL---FYS  215

425) fliP in NC_007712


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.4 bits (339),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 140/208 (68%), Gaps = 17/208 (8%)

Query  59   LTSLTFLPAALLLMSGFTRIIIVLSILRNALGTPSAPPNQILLGLALCLTFFVMSPVLDS  118
            L SL+++P  L++ ++F +I + L I RNA+G    PPN  L G+AL  T FVM+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  119  I---YRDAYLPFSQDQIDMDTAIERAAQPLRQFMLTQTRETDLSLYARLGKQA----AFA  171
            I    +D  L ++  +  ++T++    +PL++FM   TR+TD  + A+L  ++    +  
Sbjct  75   IQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKE  130

Query  172  GPEQVPMQILL---PAFVTSELKTAFQIGFTLFIPFLIIDLVIASVLMALGMMMLPPTTV  228
             ++Q   + LL   PAFV SEL+++F+IGF ++IPF++IDL+++++L+ALGM M++P T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  229  SLPFKLMLFVMVDGWQLLLGSLAQSFFS  256
            SLP+KL+LFV+V GW  LL+SL   F+S
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL---FYS  215

426) fliP in NC_017168


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

427) fliP in NC_017265


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

428) fliP in NC_003143


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

429) fliP in NC_017154


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

430) fliP in NC_017160


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

431) fliP in NC_009381


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

432) fliP in NC_014029


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

433) fliP in NC_009708


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

434) fliP in NC_010634


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

435) fliP in NC_010465


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 133/207 (65%), Gaps = 11/207 (5%)

Query  75   VFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVF  134
            +F+ +LS++P  L++ T+F +I + L + RNA+G    PPN  + G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  135  DKVYQEAY---LPFSQDKISMDVALDKGSQPLREFMLRQTRESDLA-LYARLANLPPLEG  190
            + + Q      L ++     ++ +L    +PL+ FM R+T    +A L      + P E 
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEM  131

Query  191  PEMVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASIS  247
            ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P +IS
Sbjct  132  ADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTIS  191

Query  248  LPFKLMLFVLVDGWQLLLGSLAQSFYS  274
            LP+KL+LFVLV GW  LL+SL   FYS
Sbjct  192  LPLKLLLFVLVSGWSRLLDSL---FYS  215

436) Pat9b_2399 in NC_014837


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 93.9 bits (337),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 85/210 (41%), Positives = 135/210 (65%), Gaps = 17/210 (8%)

Query  45   VFITSLTFIPAVLLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLVGLALFLTFFIMAPTF  104
            +F+ SL++IP +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+MAP  
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  105  DKIYSDAY---LPFSQDKISMDVAIDKGAQPLREFMLRQTREADLALFARLANTP----P  157
            + I        L ++     ++ ++    +PL+ FM   TR++D  + A+L +      P
Sbjct  73   HDIQQRVHDHPLELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWP  128

Query  158  IEGPEAVPMRILL---PAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPA  214
             E ++      LL   PA+V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P 
Sbjct  129  KEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPM  188

Query  215  TISLPFKLMLFVLVDGWQLLVGSLAQSFYS  244
            TISLP+KL+LFVLV GW  L++SL   FYS
Sbjct  189  TISLPLKLLLFVLVSGWSRLLDSL---FYS  215

437) fliP in NC_011147


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 93.6 bits (336),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 136/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLCAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL  FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

438) fliP in NC_006511


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 93.6 bits (336),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 136/209 (66%), Gaps = 15/209 (7%)

Query  46   VFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVI  105
            +F+ SL+++P +L++ T+F +I + + + RNA+G    PPN  L G+AL  T F+M+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  106  DKIYVDAY-QPFS-EQKISMQEALDKGAQPLCAFMLRQTREADLALFARLANSG----PL  159
            + I      +P+       +Q +L    +PL  FM   TR++D  + A+L ++     P 
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPK  129

Query  160  QGPEAVPMRILL---PAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPAT  216
            + ++      LL   PA+V SEL+++F+IGF I+IPF++IDL+++++L+ALGM MV+P T
Sbjct  130  EMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMT  189

Query  217  IALPFKLMLFVLVDGWQLLVGSLAQSFYS  245
            I+LP+KL+LFVLV GW  L++SL   FYS
Sbjct  190  ISLPLKLLLFVLVSGWSRLLDSL---FYS  215

439) fliP in NC_011961


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 93.6 bits (336),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 80/190 (43%), Positives = 131/190 (69%), Gaps = 10/190 (5%)

Query  87   TSFTRIVIVLSFVRSAIGVPQLPPNQVLIGLALFLTVFVMAPTWQAVNR----DALQPYL  142
            T+F +I + L + R+AIGV Q+PPN  L G+AL  T+FVMAP  + +++    ++L+  L
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE--L  86

Query  143  RGEINQRTALERGLQPLRTFMFRQTRERDIALFMSLGNLPRPRTPEDVPT----WVLVPA  198
             +  + +T+L   ++PL+ FM R+T    +A ++   +  +P+   D +T     + +PA
Sbjct  87   GSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPA  146

Query  199  FILSELKTAFTMGFVLFIPFLVIDLIVSSTLMAMGMIMVPPVVISLPFKLLLFVMVDGWD  258
            F++SEL+++F +GF+++IPF+VIDLIVS+ L+A+GM MV+P+ ISLP+KLLLFV+V GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  259  LLVRSLVVSF  268
             L+ SL  S+
Sbjct  207  RLLDSLFYSY  216

440) fliP in NC_021191


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 93.6 bits (336),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 87/217 (41%), Positives = 155/217 (72%), Gaps = 11/217 (5%)

Query  66   DGSKPATSLVIVLGLTLLSVAPAVLLLCTCFTKVFMVLGITRNAMGLTSMPPNQVLAGLA  125
            DG++P   +++ L L  LS+ P +L++CT F K+ M L ITRNA+G+  +PPN  L G+A
Sbjct  4    DGTNP---IMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA  60

Query  126  LFISLFIMAPVLSQVNEQGVQPYL---AGDKTQSQAFKDGVQPLRDFMAKSTREDELQLL  182
            L  ++F+MAPV  +++++  +  L   ++DK Q+ +++  ++PL+ FM+++T  D +  L
Sbjct  61   LAATMFVMAPVAHDIQQRVHDHPLELGSADKLQT-SLRTVIEPLQRFMTRNTDPDVVAHL  119

Query  183  I----RVSGQQKPANISDVELTTLVPAFVLSELRAAFIIGFVIFIPFLIIDmvvsaslms  238
            +    R+  ++ + + +  +L   +PAFV+SEL+A+F IGF+I+IPF++ID++VS  L++
Sbjct  120  LENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLA  179

Query  239  lgmmmlppvTVAMPFKLLLFVLVNGWGLIITALVGSY  275
            LGM M++P+T+++P+KLLLFVLV+GW+ ++ +L  SY
Sbjct  180  LGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

441) spaP in NC_008800


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 93.1 bits (334),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 153/202 (76%), Gaps = 4/202 (1%)

Query  19   SLLPFVIAAGTCYLKISIVLIMVRNAMGVQQVPsglalngialllslFVMMPVIQDVNHY  78
            SL+PF++   T +LKI++ L++ RNA+GVQQVP+ +AL GIAL  ++FVM PV +D+++ 
Sbjct  19   SLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQR  78

Query  79   MRTEKVDFSNVDSVDKFIDGGLGSYTAYLKKYSDPELL-NFFESLQQGRSEEESMAEADT  137
            ++ + +++++ D ++  +   + +   ++ + +DP+++ +++E+ Q+ ++ E  MA+  T
Sbjct  79   VHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE--MADQAT  136

Query  138  REPALFSLLPAYALSEIKSAFEIGFYIYLPFVVidliissillalgmmmmsPVTISVPVK  197
            ++  L+++ PA+ +SE++++FEIGF IY+PF+VIDLI+S++LLALGM M+SP+TIS+P+K
Sbjct  137  KDDLLLAI-PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLK  195

Query  198  LILFVAIDGWALISKGLIMQYM  219
            L+LFV + GW+ +  +L+  YM
Sbjct  196  LLLFVLVSGWSRLLDSLFYSYM  217

442) fliP in NC_017093


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 91/211 (44%), Positives = 146/211 (70%), Gaps = 6/211 (2%)

Query  85   ASSLVIVLGLTALSVAPALLLLCTSFTKVFMVLGITRNALGLTTMPPNQVLAGLALFLSL  144
            ++++++ L L +LS+ P LL++CT+F K+ M L ITRNA+G+  +PPN  L G+AL  ++
Sbjct  6    TNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATM  65

Query  145  FIMGPTVSSINE-VGVQPY-LAGDKTQSQAFQDGVEPLRDFMSEVTREDEVALLVKVSGA  202
            F+M+P    I++ V  +P  L++      +++  +EPL+ FM+  T  D VA L+  +  
Sbjct  66   FVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  203  EQPANMDDVP----LTTLIPAFVLSELRAAFIIGFVIFIPFLIIDlvvsaslmslgmmml  258
              P +M D +    L   IPAFV+SEL+A+F IGF+I+IPF++IDL+VS  L++LGM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  259  ppvTVALPFKLLLFVLVDGWGLIITALVGSY  289
            +P+T++LP+KLLLFVLV GW+ ++ +L  SY
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

443) fliP in NC_014532


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 78/193 (41%), Positives = 126/193 (66%), Gaps = 17/193 (8%)

Query  90   TSFTRIIIVLSLLRTAMGTQATPPNQVLLGLALFLTFFIMAPVFGEVHAQAW---VPLSN  146
            T+F +I + L + R A+G Q  PPN  L G+AL  T F+MAPV  +++ +     + L++
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  147  GDINFPEFLRQAQGPLREFMMAQTREPDLALFARLADIGE-------LQGPADVPMRILV  199
            +D ++   LR    PL+ FM   TR+ D  + A+L +  +        + ++   + + +
Sbjct  89   AD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  200  PSFVTSELKTAFQIGFTIFIPFLIIDLVVASTLMSLGMMMVPPITISLPFKLMLFVLVDG  259
            P+FV SEL+++F+IGF I+IPF++IDL+V++ L++LGM MV+P+TISLP+KL+LFVLV G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  260  WQLLIGSLAESFY  272
            W  L++SL   FY
Sbjct  205  WSRLLDSL---FY  214

444) fliP in NC_015856


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 80/195 (42%), Positives = 129/195 (67%), Gaps = 19/195 (9%)

Query  70   TSFTRIIIVLGLLRTAIGAQSSPPNQILVGLALFLTFFVMSPVF----DKAYSDAYKPFS  125
            T+F +I + L + R AIG Q  PPN  L G+AL  T FVM+PV     ++   ++    S
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  126  DNKISAEQALERGIQPFKQFMLKQTREGDLALFARLAQAPQMQGPEEVP-------LRIL  178
             +K+  + +L   I+P+++FM   TR+ D  + A+L +  Q   P E++       L + 
Sbjct  89   ADKL--QTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  179  VPAFVISELKTAFQIGFTIFIPFLIVDLVVASVLMSMGMMMVPPATISLPFKLMLFVLVD  238
            +PAFV+SEL+++F+IGF I+IPF+++DL+V+++L+++GM MV+P TISLP+KL+LFVLV 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  239  GWQLLIGALAQSFYT  253
            GW  L+++L   FY+
Sbjct  204  GWSRLLDSL---FYS  215

445) fliP in NC_007974


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.5 bits (328),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 135/205 (66%), Gaps = 10/205 (4%)

Query  67   LTSLSFLPAAMLMMTGFTRIIIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPVFDK  126
            L SLS++P  +++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  127  VYTDAY-QPLS-ENKISLETAAQRAAVPLRAFMLRQTREKDLAMFAQMAKT------PEL  178
            +      +PL   +   L+T+ +    PL+ FM R+T    +A + + ++       ++ 
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  179  QGPEDVPFTVLVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISL  238
               +D+ +++  PAFV SEL+++F+IGF I+IPF++IDL+V+++L+A+GM MV+P TISL
Sbjct  135  ATKDDLLLAI--PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  239  PFKLMLFVLVDGWQLLLGSLAQSFM  263
            P+KL+LFVLV GW  LL+SL  S+M
Sbjct  193  PLKLLLFVLVSGWSRLLDSLFYSYM  217

446) fliP in NC_018829


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  76   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  134
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  135  AAGSI-PFETAVERAGAPLHNFMLHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  189
              GS   ++T++     PL+ FM ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  190  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  249
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  250  WHLLLGSLAQSFY  262
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

447) Sulac_3139 in NC_016884


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 133/195 (69%), Gaps = 6/195 (3%)

Query  57   MAFIPGLLLTMTAFTRVITVLSFTRSALGLQQTPPNQVLVGLALFLTFFIMQPTLTAINH  116
            +++IP LL+  TAF ++   L +TR+A+G+QQ PPN  L G+AL  T F+M P    I++
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  117  QAL-HPY-LTGHLTLVEAGRRALGPLRQFMYHETRPSDLALFLQLDHVHAPRTLAGVPTA  174
            +   HP  L +   L  + R  + PL++FM ++T P  +A +L+  +   P+ +A+ +T 
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  175  A----LIPAFIISELKTAFEIGVYIFIPFVMIDLVVSTVLMSMGMMMVpptlislplkll  230
                  IPAF++SEL+++FEIG  I+IPF++IDL+VS +L+++GM MV+P  ISLPLKLL
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  231  lfvlANGWSLVVQSL  245
            LFVL +GWS +++SL
Sbjct  198  LFVLVSGWSRLLDSL  212

448) fliP in NC_015757


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 85/195 (44%), Positives = 133/195 (69%), Gaps = 6/195 (3%)

Query  57   MAFIPGLLLTMTAFTRVITVLSFTRSALGLQQTPPNQVLVGLALFLTFFIMQPTLTAINH  116
            +++IP LL+  TAF ++   L +TR+A+G+QQ PPN  L G+AL  T F+M P    I++
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  117  QAL-HPY-LTGHLTLVEAGRRALGPLRQFMYHETRPSDLALFLQLDHVHAPRTLAGVPTA  174
            +   HP  L +   L  + R  + PL++FM ++T P  +A +L+  +   P+ +A+ +T 
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  175  A----LIPAFIISELKTAFEIGVYIFIPFVMIDLVVSTVLMSMGMMMVpptlislplkll  230
                  IPAF++SEL+++FEIG  I+IPF++IDL+VS +L+++GM MV+P  ISLPLKLL
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  231  lfvlANGWSLVVQSL  245
            LFVL +GWS +++SL
Sbjct  198  LFVLVSGWSRLLDSL  212

449) fliP in NC_019382


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.2 bits (327),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  76   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  134
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  135  AAGSI-PFETAVERAGSPLHNFMLHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  189
              GS   ++T++     PL+ FM ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  190  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  249
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  250  WHLLLGSLAQSFY  262
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

450) fliP in NC_002927


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.2 bits (327),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  76   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  134
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  135  AAGSI-PFETAVERAGSPLHNFMLHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  189
              GS   ++T++     PL+ FM ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  190  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  249
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  250  WHLLLGSLAQSFY  262
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

451) fliP in NC_002928


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 91.2 bits (327),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  79   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  137
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  138  AAGSIP-FETAVERAGSPLHNFMLHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  192
              GS   ++T++     PL+ FM ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  193  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  252
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  253  WHLLLGSLAQSFY  265
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

452) fliP in NC_018518


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 90.5 bits (324),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  57   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  115
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  116  AAGSI-PFETAVERAGAPLHNFMLHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  170
              GS   ++T++     PL+ FM ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  171  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  230
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  231  WHLLLGSLAQSFY  243
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

453) fliP in NC_017223


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 90.5 bits (324),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  57   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  115
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  116  AAGSI-PFETAVERAGAPLHNFMLHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  170
              GS   ++T++     PL+ FM ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  171  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  230
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  231  WHLLLGSLAQSFY  243
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

454) fliP in NC_002929


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 90.5 bits (324),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 79/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  57   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  115
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  116  AAGSI-PFETAVERAGAPLHNFMLHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  170
              GS   ++T++     PL+ FM ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  171  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  230
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  231  WHLLLGSLAQSFY  243
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

455) PT7_0779 in NC_015458


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 90.5 bits (324),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 82/194 (43%), Positives = 126/194 (65%), Gaps = 19/194 (9%)

Query  74   TGFTRIIIVLGLLRNAMGTGASPPNSILIGLALFLTFFAMSPVFDQIYADAY-QPLSNGV  132
            T+F +I + L + RNA+G    PPN  L G+AL  T F M+PV ++I      +PL  G 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  133  IA-FEEALERGIKPLHSFMLHQTREADLTMFANM---------ANVAELQTAEEVPLRVL  182
               ++ +L   I PL+ FM   TR++D  + A++          ++A+  T +++ L + 
Sbjct  89   ADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI-  144

Query  183  VPAFMASELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTISLPFKLMLFVLAD  242
             PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+TISLP+KL+LFVL  
Sbjct  145  -PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  243  GWHLLLGSLARSFY  256
            GW  LL+SL   FY
Sbjct  204  GWSRLLDSL---FY  214

456) Bphyt_5212 in NC_010676


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 89.9 bits (322),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 83/200 (42%), Positives = 140/200 (70%), Gaps = 4/200 (2%)

Query  17   LGLLPLIVTMTTSFTKFSIVLTLLRSAVGVQQAPGNmaisalalaatlvvmaPTMEKIGG  76
            L+L+P+++ + T+F K+++ L + R+A+GVQQ P NMA+ ++ALAAT+ VMAP  + I  
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  77   DLSLGERVERGQFPDVTEVYQAVRGPLGEFMMEHSRPSERAFLVTAAKRIDP---ARDAQ  133
             +  ++ +E G    +    ++V  PL  FM  ++ P   A L+  ++R+ P   A +A 
Sbjct  78   RVH-DHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  134  ETDFSLLIPAFMISEISSGFEAGFLLYMAFLIIDLVIANVLTAMGMVMLSPTTVSTPLKL  193
              D+ L IPAF++SE+ +GFE GFL+Y++F++IDL+++N+L A+GM M+SP T+S PLKL
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  194  FVLVSVSGISKLMHGLIVSY  213
            +++V VSG S+L+++L+ SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

457) fliP in NC_018828


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 89.7 bits (321),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 78/193 (41%), Positives = 126/193 (66%), Gaps = 9/193 (4%)

Query  79   LLMMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAY-QPL  137
            L++ T+F +I + L + R+A+G    PPN  L G+AL  T + M+PV + I      +PL
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  138  AAGSI-PFETAVERAGSPLHNFILHQTRENDLT-LFANLANLPAMEDPSQVPMRIL---I  192
              GS   ++T++     PL+ F+ ++T  + ++ L+ N   + + E + Q     L   I
Sbjct  85   ELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  193  PAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLMLFVLADG  252
            PAF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P+T++LP+KL+LFVL  G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  253  WHLLLGSLAQSFY  265
            W  LL+SL   FY
Sbjct  205  WSRLLDSL---FY  214

458) fliP in NC_004547


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 89.1 bits (319),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 92/211 (44%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  59   VFLTSLTFLPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVL  118
            +FL SL+++P  L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  119  N----RVYDEAYLPFSQDQISMEVAIERGAEPLREFMLRQTRETDLALFTRLAEI-----  169
            +    RV D++ L ++  +  ++ ++    EPL+ FM   TR+TD  + ++L E      
Sbjct  73   HDIQQRVHDHP-LELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  170  PEIQGPEAVPMRVLL--PAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPP  227
            P   + +A    +LL  PAFV SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  228  ATISLPFKLMLFVLVDGWQLLLGSLAQSFYS  258
             TISLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

459) Clole_2443 in NC_015275


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 89.1 bits (319),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 84/209 (41%), Positives = 142/209 (68%), Gaps = 2/209 (0%)

Query  50   NTSASLQMIFIITIISLAPSILIMMTSFLRIIIALHFVRSAIGTQTMPPNQILVGLALFL  109
            + + ++ + +++  +SL P +LI+ T+FL+I ++L + R+AIG Q +PPN  L G+AL  
Sbjct  4    DGTNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAA  63

Query  110  TFFVMSPVFMQIKTNAID-PLEKQQITQEQAIERG-IQPLKEFMLKQTRDEDITLFMDLA  167
            T FVM+PV  +I+    D PLE     + Q+  R  I+PL+ FM ++T  + ++ +++ +
Sbjct  64   TMFVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENT  123

Query  168  HLEPYTEDTDLVKEMPLHVIIPAFIISELRAGFIIGFLVYIPFIIIDMVVaatlmsmgmm  227
            +     E +D      L + IPAF++SEL+AGF IGFL+YIPFI+ID++V+  L+++GM 
Sbjct  124  QRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  228  mlppamISLPFKVLLFILVDGWNLFIGQL  256
            M++P  ISLP+K+LLF+LV GW+ +++ L
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSL  212

460) PC1_2585 in NC_012917


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 92/211 (44%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  59   VFLTSLTFIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVL  118
            +FL SL++IP  L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  119  N----RVYEEAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI-----  169
            +    RV +++ L ++  +  ++ ++    EP++ FM   TR+TD  + ++L E      
Sbjct  73   HDIQQRVHDHP-LELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  170  PEIQGPEAVPMRVLL--PAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPP  227
            P   + +A    +LL  PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  228  ATISLPFKLMLFVLVDGWQLLLGSLAQSFYS  258
             TISLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

461) fliP in NC_013421


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 88.6 bits (317),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 91/211 (44%), Positives = 141/211 (67%), Gaps = 19/211 (9%)

Query  59   VFLTSLTFIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVL  118
            +FL SL++IP  L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  119  N----RVYEEAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI-----  169
            +    RV +++ L ++  +  ++ ++    EP++ FM   TR+TD  + ++L E      
Sbjct  73   HDIQQRVHDHP-LELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMW  127

Query  170  PEIQGPEAVPMRVLL--PAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPP  227
            P   + +A    +LL  PAFV SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P
Sbjct  128  PKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSP  187

Query  228  ATISLPFKLMLFVLVDGWQLLLGSLAQSFYS  258
             TISLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  188  MTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

462) W5S_1792 in NC_017845


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 88.6 bits (317),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 143/216 (67%), Gaps = 19/216 (8%)

Query  22   PVQTLVFLTSLTFIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffV  81
            P+   +FL SL++IP  L++ T+F +I + L + RNA+G    PPN  L G++L  T FV
Sbjct  8    PIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFV  67

Query  82   MSPVLN----RVYEEAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI  137
            M+PV +    RV +++ L ++  +  ++ ++    EP++ FM   TR+TD  + ++L E 
Sbjct  68   MAPVAHDIQQRVHDHP-LELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLEN  122

Query  138  -----PEIQGPEAVPMRVLL--PAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGM  190
                 P   + +A    +LL  PAFV SEL+++F+IGF ++IPF++IDL+V+++L+ALGM
Sbjct  123  TQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGM  182

Query  191  MMVPPATISLPFKLMLFVLVDGWQLLLGSLAQSFYS  226
             MV+P TISLP+KL+LFVLV GW  LL+SL   FYS
Sbjct  183  QMVSPMTISLPLKLLLFVLVSGWSRLLDSL---FYS  215

463) fliP in NC_009664


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 88.6 bits (317),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 141/213 (67%), Gaps = 10/213 (4%)

Query  81   SQSITVIIALTILSVAPALLLLTTCFTKILIVLGLTRNALGLQGTPPNQVLAGLALFLTM  140
            +++I + + L  LS+ P LL++ T F KI + L +TRNA+G+Q  PPN  L G+AL  TM
Sbjct  6    TNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATM  65

Query  141  FVMAPTFGAINDTAVQPYLK--GEKTATVAFTDGSQPLKEFMLKQTRPEELALMTKAAKR  198
            FVMAP    I++   +  L   +      ++    +PL+ FM ++T P+ +A +   ++R
Sbjct  66   FVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  199  DLP------ATREETPLTTLVPAFALSELRSAFIIGFVIFIPFLVIDIVVsgalmslgmm  252
              P      AT+++  L+  +PAF +SEL+++F IGF+I+IPF+VID++VS  L++LGM 
Sbjct  126  MWPKEMADQATKDDLLLA--IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQ  183

Query  253  mlPPVTVSLPFKLLLFVMIDGWGLIIKALVSSY  285
            M++P+T+SLP+KLLLFV++ GW+ ++ +L  SY
Sbjct  184  MVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

464) S70_18345 in NC_017731


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 88.1 bits (315),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 73/180 (41%), Positives = 117/180 (65%), Gaps = 12/180 (6%)

Query  64   TSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFVMSPVADQAYREAY-QPFS-ED  121
            T+F +I + L + RNA+G    PPN  L G+AL  T FVM+PVA++  +    +P+    
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  122  KISLETALERGTAPFRTFMLGQTRESDLALFARIAKVGE-------IQEAKDVPMRILVP  174
               L+T+L     P++ FM   TR++D  + A++    +        ++A    + + +P
Sbjct  89   ADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIP  145

Query  175  AFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATVSLPFKLMLFVLVDGW  234
            AF+ SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P T+SLP+KL+LFVLV GW
Sbjct  146  AFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGW  205

465) MU9_1792 in NC_020418


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 87.6 bits (313),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 119/184 (65%), Gaps = 16/184 (8%)

Query  62   MTTSFTRIIIVLGLLRNALGTPSAPPNQVLLGLALFLTFFVMSPVF----DKVYEDAYRP  117
            + T+F +I + L + RNA+G    PPN  L G+AL  T FVM+PV     ++V +++   
Sbjct  27   VCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLEL  86

Query  118  FSEDKISLETALDRGTAPLRTFMLGQTRENDLALFARIAKVGE-------IQEAKDVPMR  170
             S DK  L+T+L     PL+ FM   TR+ D  + A++    +        ++A    + 
Sbjct  87   GSADK--LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  171  ILIPAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPATVSLPFKLMLFVL  230
            + IPAF+ SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P T+SLP+KL+LFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  231  VDGW  234
            V GW
Sbjct  202  VSGW  205

466) fliP in NC_012108


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 87.3 bits (312),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 122/186 (66%), Gaps = 10/186 (5%)

Query  75   TPFTRIIVVFHFLRQAIGTQSSPPNQVVVGLALFLTFFIIKPVALDVYQNALNPYLE--R  132
            T+F +I + + + R+AIG Q  PPN  + G+AL  T F++ PVA D+ Q   +  LE   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  133  QIDYNEAFTAAQVPIRNFLLVNTREADIALFVKGA------GVAKPDTREDVSLMLLIPA  186
                + ++ +   P++ F+  NT    +A ++  +       +A   T++D  L+L IPA
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDD--LLLAIPA  146

Query  187  YVISELKTAFIIGFVIYVPFLVIDMVVASVLLAMGMMMLPPVMISLPFKLMLFVLVDGWH  246
            +V+SEL+++F IGF+IY+PF+VID++V+++LLA+GM M++P+ ISLP+KL+LFVLV GW 
Sbjct  147  FVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWS  206

Query  247  LLTGSL  252
             L +SL
Sbjct  207  RLLDSL  212

467) Ethha_2563 in NC_014828


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 78/189 (42%), Positives = 125/189 (67%), Gaps = 6/189 (3%)

Query  85   TSFTRIIIFLSFLRNALGTQQTPPNQVLVGIALFLSLFIMSPVINQINTTAY-QPLVNGQ  143
            T+F +I + L + RNA+G QQ PPN  L GIAL  ++F+M+PV ++I+     +PL  G 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  144  ITTEQAEVNA-MKPLRQFMFKQTENASLKTFLSMAGT--PTVKSLDNIPNSVL--IPAFV  198
                Q+ + + + PL++FM ++T+   +  +L  +    P   + +   + +L  IPAFV
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  199  ISELKRAFMMGFLIYLPFLIIDVIVgttlmsmgmmmlpptmISLPLKLALFVLVDGWGLT  258
            +SEL+ +F +GFLIY+PF++ID+IV+  L+++GM M++P  ISLPLKL LFVLV GW+  
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  259  VQSLVYSFK  267
            ++SL YS+ 
Sbjct  209  LDSLFYSYM  217

468) fliP in NC_008314


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 83.1 bits (296),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 133/205 (65%), Gaps = 10/205 (4%)

Query  64   LTSLSFLPAAMLLMTGFTRIIIVLGLLRSALGTATSPPNQVLVGLSLFLTFFVMAPVF--  121
            L SLS++P  +++ T+F +I + L + R+A+G    PPN  L G++L  T FVMAPV   
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  122  --DRVYNDAYKPLSENKISleaaaakaaeplkaFMLRQTREKDLAMFAQMAK---APEM-  175
              +RV +++    S +K+     +   +     FM R+T    +A + + ++   + EM 
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQR--FMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  176  QGPEEVPLSILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISL  235
            + +    L + +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+A+GM MV+P TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  236  PFKLMLFVLVDGWQLLLGSLAQSFM  260
            P+KL+LFVLV GW  LL+SL  S+M
Sbjct  193  PLKLLLFVLVSGWSRLLDSLFYSYM  217

469) fliP in NC_009792


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 82.8 bits (295),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 125/184 (68%), Gaps = 8/184 (4%)

Query  68   TCFTRFIIVLAILRQALGLQQSPPNKiltgialaltllVMRPVWTTIYTDAID-PFQ-KD  125
            T F ++ + L I R+A+G+QQ PPN  L GIALA T++VM PV   I     D P++   
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  126  EITLKQALAKAEVPLKNYMLAQTNNKAMAQMMSIA------GIEGDAREQDLTIVTPAYL  179
               L+ +L     PL+ +M  +T+   +A+++  +       + ++A  +DL +  PA++
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  180  LSELKTAFQIGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCDGWTLI  239
            +SEL+++F+IGF+IYIPF+VIDLIV+++L+A+GM M+SP+ +SLP+KL+LFVL  GW+ +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  240  VGTL  243
            +++L
Sbjct  209  LDSL  212

470) fliP in NC_018632


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTNEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

471) fliP in NC_018692


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTNEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

472) fliP in NC_018678


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTNEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

473) fliP in NC_019393


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

474) MADE_1005950 in NC_011138


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

475) fliP in NC_021716


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

476) fliP in NC_021710


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

477) fliP in NC_021717


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

478) fliP in NC_021712


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

479) fliP in NC_021714


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

480) fliP in NC_021713


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.8 bits (291),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

481) PCC21_026900 in NC_018525


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.5 bits (290),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 88/204 (44%), Positives = 135/204 (67%), Gaps = 19/204 (9%)

Query  66   FIPAALLMMTSFTRIIIVLSLLRNALGTPTAPPNQVllgltlfltffVMSPVLN----RV  121
            +IP  L++ T+F +I + L + RNA+G    PPN  L G++L  T FVM+PV +    RV
Sbjct  20   LIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRV  79

Query  122  YDEAYLPFSQDQISMEVAIERGAEPVREFMLRQTRETDLALFTRLAEI-----PEIQGPE  176
             D++ L ++  +  ++ ++    EP++ FM   TR+TD  + ++L E      P   + +
Sbjct  80   HDHP-LELGSAD-KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  177  AVPMRVLL--PAFVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPF  234
            A    +LL  PAFV SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TISLP+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  235  KLMLFVLVDGWQLLLGSLAQSFYS  258
            KL+LFVLV GW  LL+SL   FYS
Sbjct  195  KLLLFVLVSGWSRLLDSL---FYS  215

482) fliP in NC_018679


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.5 bits (290),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 142/207 (69%), Gaps = 16/207 (7%)

Query  47   ALFIMTALSLIPAFIMMMTSFTRIIVVLSILRQAIGLQQSPSNQILIGVSLFLSMFIMAP  106
            ALF + +LSLIP ++++ T+F +I + L I R+AIG+QQ P+N  L G++L  +MF+MAP
Sbjct  12   ALF-LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAP  70

Query  107  VFEEVNERALQPYLNEQLTSLDALEQA----KGPMRAFMLSQTRVKDLETFVRIAGDEGK  162
            V +++++R  +  L  +L S D L+ +      P++ FM   TR  D +   ++  +  +
Sbjct  71   VAHDIQQRVHDHPL--ELGSADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQR  125

Query  163  Y------ADTDEVPLTILIPAFVTSELKTAFQIGFMLFIPFLIIDLVVasilmamgmmml  216
                    ++    L + IPAFV SEL+++F+IGF+++IPF++IDL+V+++L+A+GM M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  217  spmiVSLPFKLMLFVLVDGWNLIFGTL  243
            SPM +SLP+KL+LFVLV GW+ ++++L
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSL  212

483) Celgi_0475 in NC_015671


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 81.5 bits (290),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 87/201 (44%), Positives = 138/201 (69%), Gaps = 10/201 (4%)

Query  84   LSVAPALLLMMTSFTKIFVVLAFTRNALGLQGVPPNQVLAGLALFLSMFVMAPVLGDVNA  143
            LS+ P LL++ T+F KI + L +TRNA+G+Q VPPN  L G+AL  +MFVMAPV  D++ 
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  144  DAVQPYLD--GELTFSQAVDVGSGPLRSFMLDHTREQDLALL------TRAADQPNPATP  195
               +  L+  +   +  ++     PL+ FM  +T  + +A L       ++ + ++ AT 
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  196  EDVPLATLIPAFLLSELRSAFIMGFVIFVPFLVIDLVVSavlmamgmmmlppvmISLPFK  255
            +D+ LA  IPAF++SEL+++F +GF+I++PF+VIDL+VS +L+A+GM M++P+ ISLP+K
Sbjct  138  DDLLLA--IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLK  195

Query  256  VLLFVLVDGWGLVVTSLVRSY  276
            +LLFVLV GW+ ++ SL  SY
Sbjct  196  LLLFVLVSGWSRLLDSLFYSY  216

484) Amet_2707 in NC_009633


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 80.7 bits (287),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 85/204 (42%), Positives = 139/204 (69%), Gaps = 10/204 (4%)

Query  71   LTILSIAPAILIMMTSFTRIVIVLSFLRNAIATQQTPPTQIIIGLALFLTFFTMAPIATD  130
            L  LS+ P +LI+ T+F +I + L + RNAI+ QQ PP   + G+AL  T F MAP+A D
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  131  I----NTNALQPYlaeelgqeealeraMEPIREFMFRQTREKDLALFIEVSNSEMPTEVA  186
            I    + ++L+  L+     + +L   +EP++ FM R+T    +A ++E ++   P E+A
Sbjct  75   IQQRVHDHPLE--LGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  187  DIATST----LIPAFIISELKTAFQMGFILFIPFIVIDMVVASTlmamgmmmlppamISL  242
            D AT       IPAF++SEL+++F++GF+++IPFIVID++V++ L+A+GM M++P  ISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  243  PFKLLLFIMVDGWNILVRALIMSF  266
            P+KLLLF++V GW+ L+ +L+ S+
Sbjct  193  PLKLLLFVLVSGWSRLLDSLFYSY  216

485) fliP in NC_010530


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 82/203 (41%), Positives = 132/203 (66%), Gaps = 6/203 (2%)

Query  77   LTSLSFLPAAMLMMTGFTRVIIVLGLLRNALGTATSPPNQVLVGLSLFLTFFVMAPVFDR  136
            L SLS++P  +++ T+F ++ + L + RNA+G    PPN  L G++L  T FVMAPV + 
Sbjct  15   LGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHD  74

Query  137  VYNDAY-KPLSenklsleaaaakaaep-lkaFMLRQTREKDLAMFAQMAK---APEM-QG  190
            + +     PL         ++ ++    L+ FM R+T    +A + + ++   + EM + 
Sbjct  75   IQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQ  134

Query  191  PEEVPLSILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPF  250
            +    L + +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+A+GM MV+P TISLP+
Sbjct  135  ATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPL  194

Query  251  KLMLFVLVDGWQLLLGSLAQSFM  273
            KL+LFVLV GW  LL+SL  S+M
Sbjct  195  KLLLFVLVSGWSRLLDSLFYSYM  217

486) GC56T3_2319 in NC_014206


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 134/199 (68%), Gaps = 6/199 (3%)

Query  29   LSIAPGILIMMTCFTRIVIVLSFVRTALGTQQMPPNQVLVGLALFLTFFIMAPTWKDIND  88
            LS+ P +LI+ T F +I + L + R A+G QQ+PPN  L G+AL  T F+MAP   DI++
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  89   QAL-QPL-FADKIDLEEAYERAAVPLKQFMSQYTRQEDLALFLSYSGAKQPKTINDIPMT  146
            +   +PL ++    L+ +      PL++FM++ T  + +A +L  +    PK + D +  
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  147  A----LVPAFAISELKTAFQMGFMIFIPFLVIDMIVAsvlmsmgmmmlppvmISLPFKIL  202
                  +PAF +SEL+++F++GF+I+IPF+VID+IV+++L+++GM M++P+ ISLP+K+L
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  203  LFVLVDGWHLVVKSLLQSF  221
            LFVLV GW  ++ SL+ S+
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

487) GTCCBUS3UF5_14250 in NC_016593


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 134/199 (68%), Gaps = 6/199 (3%)

Query  29   LSIAPGILIMMTCFTRIVIVLSFVRTALGTQQMPPNQVLVGLALFLTFFIMAPTWKDIND  88
            LS+ P +LI+ T F +I + L + R A+G QQ+PPN  L G+AL  T F+MAP   DI++
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  89   QAL-QPL-FADKIDLEEAYERAAVPLKQFMSQYTRQEDLALFLSYSGAKQPKTINDIPMT  146
            +   +PL ++    L+ +      PL++FM++ T  + +A +L  +    PK + D +  
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  147  A----LVPAFAISELKTAFQMGFMIFIPFLVIDMIVAsvlmsmgmmmlppvmISLPFKIL  202
                  +PAF +SEL+++F++GF+I+IPF+VID+IV+++L+++GM M++P+ ISLP+K+L
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  203  LFVLVDGWHLVVKSLLQSF  221
            LFVLV GW  ++ SL+ S+
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

488) GYMC52_1141 in NC_014915


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 134/199 (68%), Gaps = 6/199 (3%)

Query  29   LSIAPGILIMMTCFTRIVIVLSFVRTALGTQQMPPNQVLVGLALFLTFFIMAPTWKDIND  88
            LS+ P +LI+ T F +I + L + R A+G QQ+PPN  L G+AL  T F+MAP   DI++
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  89   QAL-QPL-FADKIDLEEAYERAAVPLKQFMSQYTRQEDLALFLSYSGAKQPKTINDIPMT  146
            +   +PL ++    L+ +      PL++FM++ T  + +A +L  +    PK + D +  
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  147  A----LVPAFAISELKTAFQMGFMIFIPFLVIDMIVAsvlmsmgmmmlppvmISLPFKIL  202
                  +PAF +SEL+++F++GF+I+IPF+VID+IV+++L+++GM M++P+ ISLP+K+L
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  203  LFVLVDGWHLVVKSLLQSF  221
            LFVLV GW  ++ SL+ S+
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

489) fliP in NC_013411


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 134/199 (68%), Gaps = 6/199 (3%)

Query  29   LSIAPGILIMMTCFTRIVIVLSFVRTALGTQQMPPNQVLVGLALFLTFFIMAPTWKDIND  88
            LS+ P +LI+ T F +I + L + R A+G QQ+PPN  L G+AL  T F+MAP   DI++
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  89   QAL-QPL-FADKIDLEEAYERAAVPLKQFMSQYTRQEDLALFLSYSGAKQPKTINDIPMT  146
            +   +PL ++    L+ +      PL++FM++ T  + +A +L  +    PK + D +  
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  147  A----LVPAFAISELKTAFQMGFMIFIPFLVIDMIVAsvlmsmgmmmlppvmISLPFKIL  202
                  +PAF +SEL+++F++GF+I+IPF+VID+IV+++L+++GM M++P+ ISLP+K+L
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  203  LFVLVDGWHLVVKSLLQSF  221
            LFVLV GW  ++ SL+ S+
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

490) fliP in NC_017047


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 123/191 (65%), Gaps = 13/191 (6%)

Query  78   SFTRIIIVLGLLRNALGTPSAPPNQVllglglfltffVMAPVF----DKIYSDAYQPFSE  133
            +F +I + L + RNA+G    PPN  L G++L  T FVMAPV     +++  ++ +  S 
Sbjct  30   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSA  89

Query  134  NKITMQEAMDKGAQPLRQFMLRQTRESDLA-LYARLANIPPLAGPEAVPMRILL---PAY  189
            +K  +Q ++    +PL++FM R+T    +A L      + P   ++      LL   PA+
Sbjct  90   DK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAF  147

Query  190  VTSELKTAFQIGFTVFIPFMIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQL  249
            V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TISLP+KL+LFVLV GW  
Sbjct  148  VMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSR  207

Query  250  LLGSLAQSFYS  260
            LL+SL   FYS
Sbjct  208  LLDSL---FYS  215

491) Rahaq_2499 in NC_015061


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 123/191 (65%), Gaps = 13/191 (6%)

Query  78   SFTRIIIVLGLLRNALGTPSAPPNQVllglglfltffVMAPVF----DKIYSDAYQPFSE  133
            +F +I + L + RNA+G    PPN  L G++L  T FVMAPV     +++  ++ +  S 
Sbjct  30   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSA  89

Query  134  NKITMQEAMDKGAQPLRQFMLRQTRESDLA-LYARLANIPPLAGPEAVPMRILL---PAY  189
            +K  +Q ++    +PL++FM R+T    +A L      + P   ++      LL   PA+
Sbjct  90   DK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAF  147

Query  190  VTSELKTAFQIGFTVFIPFMIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQL  249
            V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TISLP+KL+LFVLV GW  
Sbjct  148  VMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSR  207

Query  250  LLGSLAQSFYS  260
            LL+SL   FYS
Sbjct  208  LLDSL---FYS  215

492) Rahaq2_2559 in NC_016818


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 123/191 (65%), Gaps = 13/191 (6%)

Query  78   SFTRIIIVLGLLRNALGTPSAPPNQVllglglfltffVMAPVF----DKIYSDAYQPFSE  133
            +F +I + L + RNA+G    PPN  L G++L  T FVMAPV     +++  ++ +  S 
Sbjct  30   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSA  89

Query  134  NKITMQEAMDKGAQPLRQFMLRQTRESDLA-LYARLANIPPLAGPEAVPMRILL---PAY  189
            +K  +Q ++    +PL++FM R+T    +A L      + P   ++      LL   PA+
Sbjct  90   DK--LQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAF  147

Query  190  VTSELKTAFQIGFTVFIPFMIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQL  249
            V SEL+++F+IGF ++IPF++IDL+V+++L+ALGM MV+P TISLP+KL+LFVLV GW  
Sbjct  148  VMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSR  207

Query  250  LLGSLAQSFYS  260
            LL+SL   FYS
Sbjct  208  LLDSL---FYS  215

493) Achl_2976 in NC_011886


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 77.9 bits (276),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 137/200 (69%), Gaps = 8/200 (4%)

Query  69   LSVAPALLLMMTSFTKIFVVLAMTRNALSLPSIPPNQVLAGLALFLSLFVMWPVLTEINT  128
            LS+ P LL++ T+F KI + L +TRNA+++  +PPN  L G+AL  ++FVM PV  +I+ 
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQ-  76

Query  129  DAVQPY---LNGNLDFNGAFSAGAGPLQQFMLGHTREEDIA-LMTRAARMPNPENPGAVP  184
            + V+     L +   ++ ++ +   PLQ+FM  +T  + +A L+  + RM   E ++   
Sbjct  77   QRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQAT  136

Query  185  LQTL---IPAFMISELRAAFIIGFVIFIPFLVIDLVvsaalmsmgmmmlppvmISLPFKI  241
             + L   IPAF++SEL+A+F IGF+I+IPF+VIDL+VS  L+++GM M++P+ ISLP+K+
Sbjct  137  KDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKL  196

Query  242  LLFILVDGWGLVITSLIQSY  261
            LLF+LV GW+ ++ SL+ SY
Sbjct  197  LLFVLVSGWSRLLDSLFYSY  216

494) fliP in NC_009328


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 77.1 bits (273),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 129/189 (69%), Gaps = 6/189 (3%)

Query  35   ILIMMTCFTRIVIVLSFVRTSLGTQQMPPNQVLIGLALFLTFFIMAPTWKDINDQAL-QP  93
            +LI+ T F +I + L + R ++G QQ+PPN  L G+AL  T F+MAP   DI+++   +P
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  94   L-FAEKIDLDEAYERAAIPLKQFMSKHTRQQDLALFLSYSGAEQPKTVNDIP----LTAL  148
            L ++    L+ +      PL++FM+++T  + +A +L  +    PK + D +    L   
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  149  VPAFAISELKTAFQMGFMIFIPFLVIDMIVAsvlmsmgmmmlppvmISLPFKILLFVLVD  208
            +PAF +SEL+++F++GF+I+IPF+VID+IV+++L+++GM M++P+ ISLP+K+LLFVLV 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  209  GWYLVVKSL  217
            GW  ++ SL
Sbjct  204  GWSRLLDSL  212

495) Sked_31060 in NC_013521


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 81/199 (41%), Positives = 139/199 (70%), Gaps = 6/199 (3%)

Query  90   LSVAPSLLLMMTSFTKIFVVLALTRNALGLQGVPPNQVLAGLALFLSLFIMAPIIGQVNE  149
            LS+ P LL++ T+F KI + L +TRNA+G+Q VPPN  L G+AL  ++F+MAP+  ++++
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  150  -LGVQPYVNGGLD-FGAAVEAGSAPLREFMLGQTREEDIALMTRAADQPNPTD----PST  203
             +  +P   G+ D + +++ +   PL+ FM  +T  + +A +   +++  P +    ++ 
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  204  VPMLTLIPSFMLSELRAAFIIGFVIFIPFLVIDlvvsaslmsmgmmmlppvmISLPFKIL  263
              +L  IP+F++SEL+A+F IGF+I+IPF+VIDL+VS  L+++GM M++P+ ISLP+K+L
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  264  LFVLVDGWGMIVTALVGSY  282
            LFVLV GW+ ++ +L  SY
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

496) fliP in NC_018691


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 76.0 bits (269),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 126/190 (67%), Gaps = 18/190 (9%)

Query  70   C--FTRIIIVFSLLRTAMGTQSAPPNQVllgltlfltffIMSPVLN----RVYQEAWVPL  123
            C  F +I + + + R A+G Q  PPN  L G++L  T F+M+PV +    RV +++ + L
Sbjct  28   CTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP-LEL  86

Query  124  SNDEMGFEQALSVGSEPFREFMMAQTREPDLALFARL-AKTENL------NGPEDVPLRV  176
            ++ +  ++ +L    EP++ FM   TR+ D  + A+L  +T+ +      + +    L +
Sbjct  87   GSADK-LQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLL  142

Query  177  LLPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLV  236
             +PAFV SEL+++F+IGF I+IPF++IDL+V+++L+ALGM MV+P TISLP+KL+LFVLV
Sbjct  143  AIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLV  202

Query  237  DGWQLLIGSL  246
             GW  L++SL
Sbjct  203  SGWSRLLDSL  212

497) hscR in NC_014366


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 75.7 bits (268),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 82/201 (41%), Positives = 139/201 (70%), Gaps = 4/201 (1%)

Query  20   MAPFVAVMVTAFTKlvvvlsllrnslglQQTPPNVVLNGLAIILSLYVMYPVLLQTQSLI  79
            + PF+ ++ TAF K+ + L + RN++G+QQ PPN+ L G+A+  +++VM PV  + Q  +
Sbjct  20   LIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRV  79

Query  80   TSHLKETPEAKLTVDRLIEIFDVGKKPLKDFLIRHSKESERHFFLESARQLLPEEDRNNI  139
              H  E   A    D+L   +     PL+ F+ R++       +LE+++++ P E  ++ 
Sbjct  80   HDHPLELGSA----DKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQA  135

Query  140  HEDDFLVIVPAFTVSELSAAFQigfllflpfliidllVSNLLMALGIAMLSPTQVSLPFK  199
              DD+L+ +PAF +SEL A+F+IGFL+++PF++IDL+VSNLL+ALG+ M+SP  +SLP+K
Sbjct  136  TKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLK  195

Query  200  LLLFVFISGWTQLIHGLVLTY  220
            LLLFV++SGW++L+++L  +Y
Sbjct  196  LLLFVLVSGWSRLLDSLFYSY  216

498) fliP in NC_010681


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 135/200 (68%), Gaps = 6/200 (3%)

Query  79   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQALGTSTTPPNQVLVGLALFLTLFVMSPVL  138
            L+L  LS++P +L++ T+F +I + L + R+A+G    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  139  DKAYTDGY-KPFS-DGTIPMETAVNRGLAPFKTFMLRQTRESDLA-LFARISHAAPMQGP  195
            +         P+  +++  ++T++   + P++ FM R+T    +A L+    +  P + +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  196  EDVP---LSLLVPSFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATISL  252
            ++     L L +P+FV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  253  PFKLMLFVLVDGWQLLLGSL  272
            P+KL+LFVLV GW  LL+SL
Sbjct  193  PLKLLLFVLVSGWSRLLDSL  212

499) fliP in NC_009076


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  78   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV-  136
            L+L  LS++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  137  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  192
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  193  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  249
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  250  SLPFKLMLFVLVDGWQLLIGSL  271
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

500) fliP in NC_009074


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  78   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV-  136
            L+L  LS++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  137  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  192
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  193  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  249
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  250  SLPFKLMLFVLVDGWQLLIGSL  271
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

501) BPC006_I0032 in NC_018527


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  78   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV-  136
            L+L  LS++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  137  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  192
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  193  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  249
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  250  SLPFKLMLFVLVDGWQLLIGSL  271
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

502) fliP in NC_012695


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  78   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV-  136
            L+L  LS++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  137  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  192
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  193  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  249
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  250  SLPFKLMLFVLVDGWQLLIGSL  271
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

503) fliP in NC_017831


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.4 bits (263),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  55   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV-  113
            L+L  LS++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  114  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  169
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  170  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  226
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  227  SLPFKLMLFVLVDGWQLLIGSL  248
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

504) fliP in NC_007434


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.4 bits (263),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  55   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV-  113
            L+L  LS++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  114  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  169
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  170  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  226
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  227  SLPFKLMLFVLVDGWQLLIGSL  248
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

505) fliP in NC_021884


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.4 bits (263),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 82/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  55   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPV-  113
            L+L  LS++P +L++ T+F +I + L + R+AIG    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  114  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  169
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  170  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  226
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  227  SLPFKLMLFVLVDGWQLLIGSL  248
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

506) bglu_1g00190 in NC_012724


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 74.2 bits (262),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 138/202 (69%), Gaps = 10/202 (4%)

Query  68   LLLTMLSFLPAIVLMMTSFTRIIIVLSLMRQALGTATTPPNQVLVGLALFLTLFVMSPVI  127
            L+L  LS++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  128  ----DRAYNDGYKPFSAGTLPMDQAVQRGLAPFKTFMLKQTREGDLA-LFAKIAKAPAMQ  182
                +R  ++     SA+ L  + +++  + P++ FM ++T  + +A L+ +  +  + +
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  183  GPEDVP---LPLLVPAFVTSELKTGFQIGFTIFIPFLIIDLvvasvlmsmgmmmvsPTTI  239
             +++     L L +PAFV SEL++GF+IGF I+IPF++IDL+V+++L+++GM MVSP TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  240  SLPFKLMLFVLVDGWQLLIGSL  261
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

507) fliP in NC_006350


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.9 bits (261),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  55   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPSQVLVGLALFLTLFVMSPV-  113
            L+L  LS++P +L++ T+F +I + L + R+AIG    PP+  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  114  ---LDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA-LFAKISKAAPMQ  169
                +R  +++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  170  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  226
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  227  SLPFKLMLFVLVDGWQLLIGSL  248
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

508) fliP in NC_005085


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.9 bits (261),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 83/206 (41%), Positives = 141/206 (69%), Gaps = 9/206 (4%)

Query  50   LFMTALTFIPAMMLMMTAFTRIVIVLSLLRQALGTTQSPPNQVIVGLALFLTLFVMGPTF  109
            LF+ +L++IP ++++ TAF +I + L + R+A+G  Q PPN  + G+AL  T+FVM+P  
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  110  DQVYAKAW-VPFS-DDKISFNQALDEGSKPMKAFMLRQTREKDLAFFIEISQS--PKPQS  165
            +++  +    P+  +    ++ +L     P++ FM R+T    +A ++E +Q   PK  +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  166  KEEVSMKTL--IPAFAVSELKTAfqigfmifipfmiiDLVVASILMAMGMMMVSPVTISL  223
             +      L  IPAF +SEL+++F+IGF+I+IPF++IDL+V+++L+A+GM MVSP+TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  224  PFKMMLFVLVDGWTLLMGSLVQSFYT  249
            P+K++LFVLV GW+ L++SL   FY+
Sbjct  193  PLKLLLFVLVSGWSRLLDSL---FYS  215

509) BC1003_3339 in NC_014539


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.9 bits (261),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 134/200 (67%), Gaps = 6/200 (3%)

Query  79   LLLTMLSFLPAMVLMMTSFTRIIIVLSLLRQALGTTTTPPNQVLVGLALFLTLFVMSPVL  138
            L+L  LS++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  139  DKAYTDGYK-PFSEGTVP-METAVSRGLAPFKTFMLRQTRESDLA-LFARISHAAPMQGP  195
            +         P+  G+   ++T++   + P++ FM R+T    +A L+    +  P + +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  196  EDVP---LSLLVPSFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATISL  252
            ++     L L +P+FV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  253  PFKLMLFVLVDGWQLLLGSL  272
            P+KL+LFVLV GW  LL+SL
Sbjct  193  PLKLLLFVLVSGWSRLLDSL  212

510) BC1001_3381 in NC_015136


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.6 bits (260),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 134/200 (67%), Gaps = 6/200 (3%)

Query  79   LLLTMLSFLPAMVLMMTSFTRIIIVLSLLRQALGTTTTPPNQVLVGLALFLTLFVMSPVL  138
            L+L  LS++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  139  DKAYTDGYK-PFSEGTVP-METAVSRGLAPFKTFMLRQTRESDLA-LFARISHAAPMQGP  195
            +         P+  G+   ++T++   + P++ FM R+T    +A L+    +  P + +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  196  EDVP---LSLLVPSFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATISL  252
            ++     L L +P+FV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  253  PFKLMLFVLVDGWQLLLGSL  272
            P+KL+LFVLV GW  LL+SL
Sbjct  193  PLKLLLFVLVSGWSRLLDSL  212

511) BUPH_03734 in NC_018695


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.6 bits (260),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 134/200 (67%), Gaps = 6/200 (3%)

Query  79   LLLTMLSFLPAMVLMMTSFTRIIIVLSLLRQALGTTTTPPNQVLVGLALFLTLFVMSPVL  138
            L+L  LS++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  139  DKAYTDGYK-PFSEGTVP-METAVSHGLAPFKTFMLRQTRESDLA-LFARISHAAPMQGP  195
            +         P+  G+   ++T++   + P++ FM R+T    +A L+    +  P + +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  196  EDVP---LSLLVPSFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATISL  252
            ++     L L +P+FV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  253  PFKLMLFVLVDGWQLLLGSL  272
            P+KL+LFVLV GW  LL+SL
Sbjct  193  PLKLLLFVLVSGWSRLLDSL  212

512) Celf_0690 in NC_015514


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.4 bits (259),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 84/201 (42%), Positives = 139/201 (70%), Gaps = 10/201 (4%)

Query  44   LSVAPALILMTTSFTKIFVVLSFTRNALGLQGVPPNQVLAGLALFLSLFVMAPVVSDIN-  102
            LS+ P L+++ T+F KI + L +TRNA+G+Q VPPN  L G+AL  ++FVMAPV  DI+ 
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  103  SVGVQPY-LDGSLTFSQAVDVGSGPLREFMLGQTREQDLALL------TRAADQENPASP  155
             V  +P  L+++  +  ++     PL+ FM  +T  + +A L       ++ +  + A+ 
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  156  EDVPFATLVPAFLLSELRSAFIMGFVIFVPFLVIDlvvsaslmsmgmmmlppvmISLPFK  215
            +D+ +A  +PAF++SEL+++F +GF+I++PF+VIDL+VS  L+++GM M++P+ ISLP+K
Sbjct  138  DDLLLA--IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLK  195

Query  216  ILLFVLVDGWGLVVTSLVGSY  236
            +LLFVLV GW+ ++ SL  SY
Sbjct  196  LLLFVLVSGWSRLLDSLFYSY  216

513) bgla_1g00250 in NC_015381


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.1 bits (258),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 136/202 (68%), Gaps = 10/202 (4%)

Query  81   LLLTMLSFLPAIVLMMTSFTRIIIVLSLLRQALGTTTTPPNQVLVGLALFLTLFVMSPV-  139
            L+L  LS++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  140  ---LDRAYTDGYQPFSAGTLPMDQAVQRGLAPFKTFMLKQTRESDLA-LFARISKAPPMQ  195
                +R   +  +  SA+ L  + +++  + P++ FM ++T    +A L+    +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKL--QTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  196  GPEDVP---LPLLVPAFLTSELKTGFQIGFTIFIPFLIIDLvvasvlmsmgmmmvsPTTI  252
             +++     L L +PAF+ SEL++GF+IGF I+IPF++IDL+V+++L+++GM MVSP TI
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  253  SLPFKLMLFVLVDGWQLLIGSL  274
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

514) fliP in NC_021173


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 73.1 bits (258),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 81/202 (41%), Positives = 135/202 (67%), Gaps = 10/202 (4%)

Query  55   LLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQALGTASTPPNQVLVGLALFLTLFVMSPV-  113
            L+L  LS++P +L++ T+F +I + L + R+A+G    PPN  L G+AL  T+FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  114  ---LDRAYADAYKPFSEGTLQMDQAVQRGAAPFKTFMLKQTRETDLA-LFAKISKAAPMQ  169
                +R   ++    S + LQ   +++    P++ FM ++T    +A L+ +  +  P +
Sbjct  73   HDIQQRVHDHPLELGSADKLQ--TSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKE  130

Query  170  GPEDVP---LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDmvvasvlmsmgmmmvsPATV  226
             +++     L L +PAFV SEL++GF+IGF I+IPF++ID++V+++L+++GM MVSP T+
Sbjct  131  MADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTI  190

Query  227  SLPFKLMLFVLVDGWQLLIGSL  248
            SLP+KL+LFVLV GW  L++SL
Sbjct  191  SLPLKLLLFVLVSGWSRLLDSL  212

515) HydSN_0660 in NC_020814


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 86/211 (41%), Positives = 139/211 (66%), Gaps = 3/211 (1%)

Query  53   TEAIRLILILTVLSLAPSIIIMTTSFIRIVTVLSVLRQAIGLPNVPPNQVITSLALFLTF  112
            T++I L L+L  LSL P ++I+ T+F++I   L + R+AIG+ +VPPN  + ++AL  T 
Sbjct  6    TNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATM  65

Query  113  YVMYPVINQINQNALQPYLQHKITDK--QFIQNTIEPLKEFMVRNTKVSTERTFLLASni  170
            +VM PV ++I+Q   +  L+   +DK    ++  IEPL+ FM RNT       +L  ++ 
Sbjct  66   FVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  171  p-nkdniknindLPLSVVIPAFMVSELSIAfqiifllylpfliiDMVVSAILLAMGIIMI  229
               K+   +     L + IPAF++SEL  +F+I FL+Y+PF++ID++VS +LLA+G+ M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  230  PPTVISLPFKIMLFVLVNGWELVILSLVRSY  260
            +P  ISLP+K++LFVLV+GW  ++ SL  SY
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

516) HydHO_0645 in NC_020411


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 71.0 bits (250),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 86/211 (41%), Positives = 139/211 (66%), Gaps = 3/211 (1%)

Query  44   TEAIRLILILTVLSLAPSIIIMTTSFIRIVTVLSVLRQAIGLPNVPPNQVITSLALFLTF  103
            T++I L L+L  LSL P ++I+ T+F++I   L + R+AIG+ +VPPN  + ++AL  T 
Sbjct  6    TNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATM  65

Query  104  YVMYPVINQINQNALQPYLQHKITDK--QFIQNTIEPLKEFMVRNTKVSTERTFLLASni  161
            +VM PV ++I+Q   +  L+   +DK    ++  IEPL+ FM RNT       +L  ++ 
Sbjct  66   FVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  162  p-nkdniknindLPLSVVIPAFMVSELSIAfqiifllylpfliiDMVVSAILLAMGIIMI  220
               K+   +     L + IPAF++SEL  +F+I FL+Y+PF++ID++VS +LLA+G+ M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  221  PPTVISLPFKIMLFVLVNGWELVILSLVRSY  251
            +P  ISLP+K++LFVLV+GW  ++ SL  SY
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

517) fliP in NC_008340


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 70.8 bits (249),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 76/185 (42%), Positives = 122/185 (66%), Gaps = 10/185 (5%)

Query  68   SFTRIIIVLAILRQAMGTASTPSNQVLIGLALFLTLFVMAPVFQE----VHDTALAPYLA  123
            +F +I + L I R+A+G    P+N  L G+AL  T+FVMAPV ++    VHD +L   L+
Sbjct  30   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE--LG  87

Query  124  EEMAPDEALEAASEPMRGFMIAQTRESDLGLFL----RIAGYDQVDSPDDVPFTVLVPAF  179
                 + +L +  EP++ FM  +T    ++ +L    R+   +  D +    + + +PAF
Sbjct  88   SADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAF  147

Query  180  MTSELKTAFTIGFIIYLPFLVIDLVVAstlmsmgmlmlspmiislpFKILLFVLVDGWSL  239
            + SEL+++F IGF+IY+PF+VIDL+V++ L+++GM M+SPM ISLP+K+LLFVLV GWS 
Sbjct  148  VMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSR  207

Query  240  LMGTL  244
            L+++L
Sbjct  208  LLDSL  212

518) Desaci_3816 in NC_018068


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 70.8 bits (249),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 127/189 (68%), Gaps = 6/189 (3%)

Query  68   ILLLMTSFTRIVIVLSFVRNALGTQQLPPNQVLVGLALFLSFFVMAPTWNQINTNAIQPY  127
            +L++ T+F +I + L + RNA+G QQ+PPN  L G+AL  + FVMAP  ++I+    +  
Sbjct  24   LLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHP  83

Query  128  MKNQITQT--EALTKAEEPLRDFMFKQTREKDLELFVGLAKMERPKTYRDIPT----YVL  181
            +    ++    +L    EPL+ FM ++T    +  ++  ++  +PK   D +T     + 
Sbjct  84   LELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLA  143

Query  182  IPAFVISELKTAFQMGFAIFIPFMVIDMIVSSTlmsigmmmlppmmislpFKILLFVLVD  241
            IPAFV+SEL+++F++GF I+IPF+VID+IVS+ L+++GM M++PM ISLP+K+LLFVLV 
Sbjct  144  IPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVS  203

Query  242  GWHLVVQSL  250
            GW  +++SL
Sbjct  204  GWSRLLDSL  212

519) Desor_4879 in NC_016584


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 68.9 bits (242),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 122/188 (65%), Gaps = 6/188 (3%)

Query  74   TSFTRIVIVLSFVRNALGTQQLPPNQVLVGLALFLSFFVMAPTWNEINTNAVQPYIKHQI  133
            T+F +I + L + RNA+G QQ+PPN  L G+AL  + FVMAP  ++I+    +  +    
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  134  TQS--EALDRAEEPLRMFMFKQTREKDL-QLFVGLSKM---EQPKTYRDVPTYVLIPAFV  187
            ++    +L    EPL+ FM ++T    + +L+    +M   E +         + IPAFV
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  188  ISELKTAFQMGFAIFVPFIVIDMIVSSTlmsigmmmlppmmislpFKLLLFVLVDGWHLV  247
            +SEL+++F++GF I++PFIVID+IVS+ L+++GM M++PM ISLP+KLLLFVLV GW  +
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  248  VESLVTSF  255
            ++SL  S+
Sbjct  209  LDSLFYSY  216

520) fliP in NC_011126


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 68.7 bits (241),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 85/211 (41%), Positives = 139/211 (66%), Gaps = 3/211 (1%)

Query  44   TEAIRLILILTVLSLAPSIIIMTTSFIRIVTVLSVLRQAIGLPNVPPNQVITSLALFLTF  103
            T++I L L+L  LSL P ++I+ T+F++I   L + R+AIG+ +VPPN  + ++AL  T 
Sbjct  6    TNPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATM  65

Query  104  YVMYPVINQINQNALQPYLQHKITDK--QFIQNTIEPIKDFMVRNTKVSTERTFLLASni  161
            +VM PV ++I+Q   +  L+   +DK    ++  IEP++ FM RNT       +L  ++ 
Sbjct  66   FVMAPVAHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQR  125

Query  162  p-nkdniknindLPLSVVIPAFMVSELSIAfqiifllylpfliiDMVVSAILLAMGIIMI  220
               K+   +     L + IPAF++SEL  +F+I FL+Y+PF++ID++VS +LLA+G+ M+
Sbjct  126  MWPKEMADQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMV  185

Query  221  PPTVISLPFKIMLFVLVNGWELVILSLVRSY  251
            +P  ISLP+K++LFVLV+GW  ++ SL  SY
Sbjct  186  SPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

521) fliP in NC_006348


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 66.0 bits (231),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 72/173 (42%), Positives = 116/173 (68%), Gaps = 10/173 (5%)

Query  6    RQAIGTASTPPNQVLVGLALFLTLFVMSPV----LDRAYNDAYKPFSEGTLQMDQAVQRG  61
            R+AIG    PPN  L G+AL  T+FVM+PV     +R  +++    S + LQ   +++  
Sbjct  42   RNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSADKLQ--TSLRTV  99

Query  62   TAPFKAFMLKQTRETDLA-LFAKISKAAPMQGPEDVP---LSLLVPAFVTSELKTGFQIG  117
              P++ FM ++T    +A L+ +  +  P + +++     L L +PAFV SEL++GF+IG
Sbjct  100  IEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFVMSELQAGFEIG  159

Query  118  FTIFIPFLIIDmvvasvlmsmgmmmvsPATVSLPFKLMLFVLVDGWQLLIGSL  170
            F I+IPF++ID++V+++L+++GM MVSP T+SLP+KL+LFVLV GW  L++SL
Sbjct  160  FLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSL  212

522) fliP in NC_017249


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 60.5 bits (210),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 87/217 (41%), Positives = 139/217 (65%), Gaps = 20/217 (9%)

Query  23   RAIQLIALLTVLSIAPSILIMMTSFTRIVVVLSLLRTAMGTATAPPNSVIIALAMFLTFF  82
             +I L  +L  LS+ P +LI+ T+F +I + L + R A+G    PPN  + ++A+  T F
Sbjct  7    NPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMF  66

Query  83   VMGPVLQKSYDEGIRPLVANQ---LGVEDALQ---RASV-PLRGFMQKNVREKDLKLFLD  135
            VM+PV      ++I+  V ++   LG  D LQ   R+ + PL+ FM +N     +  +L+
Sbjct  67   VMAPV-----AHDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLE  121

Query  136  LSGE------PPPATPDDLALRILVPAFMISELKRAFEigfllflpfliidlVVASVLMS  189
             +        +  AT DDL L I  PAF++SEL+ +FEIGFL+++PF++IDL+V+++L++
Sbjct  122  NTQRMWPKEMADQATKDDLLLAI--PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLA  179

Query  190  MGMMMLPPATISLPFKLIFFVLVDGWSLVAGSLVQSY  226
            +GM M++P TISLP+KL++FVLV GWS + +SL  SY
Sbjct  180  LGMQMVSPMTISLPLKLLLFVLVSGWSRLLDSLFYSY  216

523) fliP in NC_008048


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 58.9 bits (204),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 78/185 (43%), Positives = 123/185 (67%), Gaps = 12/185 (6%)

Query  75   FTRIIIVLSILRHALGLQQTPPNQvlvglslflslfvMQPVISEVN-RVAIEPYGQEQID  133
            F +I + L I R+A+G+QQ PPN  L G++L  ++FVM PV  +++ RV  +P      D
Sbjct  31   FLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGSAD  90

Query  134  IGEAVSRSG-DALHGFMMKQTRKTDLMMFAKIARAPAYASPKDVP-------FSILLPAF  185
              ++  R+  ++L+ FM   TR+TD  + A +        PK+++       + + +PAF
Sbjct  91   KLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAF  147

Query  186  VTSELKTAFQIGFLIFLPFLVIDLIVasalmslgmmmlsPTIISMPFKLLLFVLVDGWAL  245
            V SEL+++F+IGFLI++PF+VIDLIV++ L++LGM M+SP  IS+P+KLLLFVLV GW+ 
Sbjct  148  VMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSR  207

Query  246  TMGSL  250
             ++SL
Sbjct  208  LLDSL  212

524) Mrad2831_5050 in NC_010505


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 54.2 bits (186),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 129/199 (65%), Gaps = 6/199 (3%)

Query  61   LAVAPSVLVMATAFTRIVVVLSILRSALGTQTAPPTAVLVSLALFLTAFVMAPTGRAAYS  120
            L++ P +L++ TAF +I + L I R+A+G Q  PP   L ++AL  T FVMAP ++    
Sbjct  18   LSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQ  77

Query  121  AGIE-PLIAGRITQAQAFERAS-APFKTFMLRNVREKDLKLFLDLAKVPAPKGPEDVG--  176
               + PL  G   + Q+  R+   P++ FM RN     +  +L+ ++   PK   D +  
Sbjct  78   RVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATK  137

Query  177  --LEIVTPAFMISELRRAfeigfllfipfliidlVVASVLMAVGMMMVPPATVALPFKLI  234
              L +  PAF++SEL+ +FEIGFL++IPF++IDL+V+++L+A+GM MV+P T++LP+KL+
Sbjct  138  DDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLL  197

Query  235  FFVLVDGWTLVAGSLVQSY  253
            +FVLV GW+ + +SL  SY
Sbjct  198  LFVLVSGWSRLLDSLFYSY  216

525) BC1002_3015 in NC_014117


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 83/200 (42%), Positives = 131/200 (66%), Gaps = 6/200 (3%)

Query  71   LLLTMLSFLPAMVLMMTSFTRIVIVLSLLRQALGTTTTPPNQVLVGLALFLTFFVMSPVL  130
            L+L  LS++P ++++ T+F +I + L + R+A+G    PPN  L G+AL  T FVM+PV 
Sbjct  13   LFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVA  72

Query  131  DKAYNEGY-KPFSEGTLPMDQAVSRGV-APFKTFMLRQTRESDLA-LFARISHAAPMQGP  187
            +   +     P+  G+    Q+  R V  P++ FM R+T    +A L+    +  P + +
Sbjct  73   HDIQQRVHDHPLELGSADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMA  132

Query  188  EDVP---LSLLVPSFVTSELKtgftigftifiPFLIIDmvvasvlmsmgmmmvsPATISL  244
            ++     L L +P+FV SEL++GF IGF I+IPF++ID++V+++L+++GM MVSP TISL
Sbjct  133  DQATKDDLLLAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISL  192

Query  245  PFKLMLFVLVDGWQLLLGSL  264
            P+KL+LFVLV GW  LL+SL
Sbjct  193  PLKLLLFVLVSGWSRLLDSL  212

526) Alvin_2932 in NC_013851


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 31.4 bits (99),  Expect = 0.037, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 135/197 (69%), Gaps = 15/197 (7%)

Query  62   LIMMTSFTRIIIVLGILRQGLGTTQTPSNQIllglalfltlFVMSPIFQEIYDTAIQPYM  121
            LI+ T+F +I + L I R+++G  Q P+N  L G+AL  T+FVM+P+ ++I +   +  +
Sbjct  25   LIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPL  84

Query  122  EEQLGTEEALAKAVK----PLRTFMLAQTRESDLA--LFAGIRGI---DGFESPDDIPLT  172
            E  LG+ + L  +++    PL+ FM ++  ++D+   L+   + +   +  + +    L 
Sbjct  85   E--LGSADKLQTSLRTVIEPLQRFM-TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLL  141

Query  173  LLIPSFVISELKTAfqigflilipfliiDlvvasvlmsmgmmmlspliislpFKLMLFVL  232
            L IP+FV+SEL+++F+IGFLI IPF++IDL+V+++L+++GM M+SP+ ISLP+KL+LFVL
Sbjct  142  LAIPAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVL  201

Query  233  VDGWSLLLGTLARSFYT  249
            V GWS LL++L   FY+
Sbjct  202  VSGWSRLLDSL---FYS  215

527) Anae109_0745 in NC_009675


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 28.2 bits (87),  Expect = 0.27, Method: Compositional matrix adjust.
 Identities = 85/188 (46%), Positives = 130/188 (70%), Gaps = 2/188 (1%)

Query  36   TSFLKIVVVLSIARSALGAPQVPPNtavtglalvltalvMAPvgeravaamraapaghgv  95
            T+FLKI + L I+R+A+G  QVPPN A+ G+AL  T +VMAPV++     ++  P   G 
Sbjct  29   TAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLELGS  88

Query  96   aGTL-AQLERGSDPLRGfllrfaraddraafvdvarrlrGPDAAPPAERDLAVLA-PAFV  153
            A+ L + L    +PL+ F+ R + +D  A +++ ++R++  + A  A +D  +LA PAFV
Sbjct  89   ADKLQTSLRTVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAIPAFV  148

Query  154  VSELRRAFTIGflvfvpflvvdlvvsnvllalGLTQLSPTSIALPFKLLLFVAVDGWKLL  213
            +SEL+ +F IGFL+++PF+V+DL+VSN+LLALG+  +SP +I+LP+KLLLFV V GW  L
Sbjct  149  MSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSGWSRL  208

Query  214  ARALALSY  221
              +L  SY
Sbjct  209  LDSLFYSY  216

528) Thivi_0368 in NC_018012


> AY597277|28|G28|51102999|AAT96146.1|Pseudomonas_viridiflava_LP23.1a|+|25835..26488|hrcR|-|HrcR
Length=217

 Score = 28.2 bits (87),  Expect = 0.32, Method: Compositional matrix adjust.
 Identities = 79/194 (41%), Positives = 130/194 (68%), Gaps = 19/194 (9%)

Query  63   SFTRIIIVLGILRQGLGTSQTPSNQIllglalfltlFVMAPVFQEIYDTAAIPYMEEKLG  122
            +F +I + L I R+++G  Q P+N  L G+AL  T+FVMAPV ++I +      +E  LG
Sbjct  30   AFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVHDHPLE--LG  87

Query  123  TEEALGKAIK----PLRTFMLAQTRETDLSLFAE-------IRGLDGFDSPDAIPLNLLV  171
            + + L  +++    PL+ FM   TR+TD  + A+       ++  +  D +    L L +
Sbjct  88   SADKLQTSLRTVIEPLQRFM---TRNTDPDVVAHLLENTQRMWPKEMADQATKDDLLLAI  144

Query  172  PAFVISELKTAfqigflilipfliiDlvvasvlmsmgmmmlspmIISLPFKIMLFVLVDG  231
            PAFV+SEL+++F+IGFLI IPF++IDL+V+++L+++GM M+SPM ISLP+K++LFVLV G
Sbjct  145  PAFVMSELQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLKLLLFVLVSG  204

Query  232  WSLVMGTLAQSFFT  245
            WS ++++L   F++
Sbjct  205  WSRLLDSL---FYS  215