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PAthogenisity Island DataBase (PAI DB)

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Homologs of ef0028 gene of AF454824

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EF0508
( NP_814289.1 )

hypothetical protein

NC_004668
(Enterococcus faecalis V583)

6e-72

100

2) RBR_10480
( YP_007781129.1 )

DnaJ-class molecular chaperone with C-terminal Zn finger domain

NC_021013
(Ruminococcus bromii L2-63)

1e-23

3) OBV_01780
( YP_004879882.1 )

hypothetical protein

NC_016048
(Oscillibacter valericigenes Sjm18-20)

2e-20

• Sequence Alignments

1) EF0508 in NC_004668


> AF454824|28|G28|21693287|AAM75234.1|Enterococcus_faecalis_MMH594|+|30418..30918|ef0028|-|EF0028
Length=166

 Score =  263 bits (982),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)

Query  1    MKFIKDVTTLEELKRVYKKLALKYHPDMGGTDKEMAQINNEYEALFDKLKNTHKNKEGEY  60
            MKFIKDVTTLEELKRVYKKLALKYHPDMGGTDKEMAQINNEYEALFDKLKNTHKNKEGEY
Sbjct  1    MKFIKDVTTLEELKRVYKKLALKYHPDMGGTDKEMAQINNEYEALFDKLKNTHKNKEGEY  60

Query  61   YQKETTETPQEWQEIIHKLLTLKMENVSIEVIGAFLWVSGNTKPYKEELKALNMKWSNNK  120
            YQKETTETPQEWQEIIHKLLTLKMENVSIEVIGAFLWVSGNTKPYKEELKALNMKWSNNK
Sbjct  61   YQKETTETPQEWQEIIHKLLTLKMENVSIEVIGAFLWVSGNTKPYKEELKALNMKWSNNK  120

Query  121  KSWYLAPDGYKKRSKKKYNMSDIRNMYGSQVVKEEQAKQKTLTATA  166
            KSWYLAPDGYKKRSKKKYNMSDIRNMYGSQVVKEEQAKQKTLTATA
Sbjct  121  KSWYLAPDGYKKRSKKKYNMSDIRNMYGSQVVKEEQAKQKTLTATA  166

2) RBR_10480 in NC_021013


> AF454824|28|G28|21693287|AAM75234.1|Enterococcus_faecalis_MMH594|+|30418..30918|ef0028|-|EF0028
Length=166

 Score =  102 bits (369),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 71/164 (44%), Positives = 114/164 (70%), Gaps = 2/164 (1%)

Query  1    MKYFTNCNTAEDLKKKYRRLAKQLHPDLGGDTEEFKVMQNEYEIMWERLKNIHTNSeget  60
            MK++ +  T E+LK+ Y++LA + HPD+GG   E   ++NEYE + ++LKN H N EGE 
Sbjct  1    MKFIKDVTTLEELKRVYKKLALKYHPDMGGTDKEMAQINNEYEALFDKLKNTHKNKEGEY  60

Query  61   ytkettetpqeFINIINVLTSL--SDIEVEICGTWLWVSGNTKAHKEVLKELKFRYAHKK  118
            Y KETTETPQE  +II+ L +L   ++ +E+ G+ LWVSGNTK+ KE LK L+ + +++K
Sbjct  61   YQKETTETPQEWQEIIHKLLTLKMENVSIEVIGAFLWVSGNTKPYKEELKALNMKWSNNK  120

Query  119  QAWYYHTEPYRKKSKRELTLDEIRDMFGSEKYNQSENKTPTLHS  162
            ++WY   + Y+K+SK+   + +IR+M+GS+  ++ + K  TL +
Sbjct  121  KSWYLAPDGYKKRSKKKYNMSDIRNMYGSQVVKEEQAKQKTLTA  164

3) OBV_01780 in NC_016048


> AF454824|28|G28|21693287|AAM75234.1|Enterococcus_faecalis_MMH594|+|30418..30918|ef0028|-|EF0028
Length=166

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 66/162 (41%), Positives = 104/162 (65%), Gaps = 8/162 (4%)

Query  3    KYFIDCKTLDELkkaykaaamkyHPDMGGDTATMQAVNAEYEARFEVLKRGQNERAAEDT  62
            K++ D  TL+ELK+ YK  A+KYHPDMGG    M  +N EYEA F+ LK  ++++ +E  
Sbjct  2    KFIKDVTTLEELKRVYKKLALKYHPDMGGTDKEMAQINNEYEALFDKLKNTHKNKEGEYY  61

Query  63   TGTAHATTEAPEDFIQIINVLL--HMDGLTVELCGRWLWIGGETKKHKDALNAAGCRWSS  120
                  TTE+P++  +II+ LL   M+ +++E+ G  LW++G+TK  K+ L+A   +WS+
Sbjct  62   ---QKETTETPQEWQEIIHKLLTLKMENVSIEVIGAFLWVSGNTKPYKEELKALNMKWSN  118

Query  121  SKKLWSWHFAEDG-SKWHKSHYSMDHIRGKYGSERFNSANTK  161
            +KK  SW +A DG  K+ K  Y+M +IR  YGS+  +  ++K
Sbjct  119  NKK--SWYLAPDGYKKRSKKKYNMSDIRNMYGSQVVKEEQAK  158