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Homologs of SAKOR_00416 gene of NC_022226_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAKOR_00416
( YP_008490600.1 )

Type I restriction-modification system specificity subunit

NC_022226
(Staphylococcus aureus CN1)

6e-152

100

2) M013TW_0393
( YP_005296860.1 )

Type I restriction-modification system,specificity subunit S

NC_016928
(Staphylococcus aureus M013)

3e-93

3) hsdS
( YP_008587017.1 )

type I restriction-modification system, S subunit

NC_022443
(Staphylococcus aureus SA40)

3e-93

4) hsdS
( YP_008584484.1 )

type I restriction-modification system, S subunit

NC_022442
(Staphylococcus aureus SA957)

3e-93

5) hsdS
( YP_186689.1 )

type I restriction-modification enzyme, S subunit, EcoA family protein

NC_002951
(Staphylococcus aureus COL)

4e-60

6) hsdS
( YP_494442.1 )

type I restriction-modification enzyme, S subunit

NC_007793
(Staphylococcus aureus FPR3757)

4e-60

7) BN843_18130
( YP_007868878.1 )

Type I restriction-modification system,specificity subunit S

NC_021059
(Staphylococcus aureus M1)

4e-60

8) hsdS
( YP_001332733.1 )

type I restriction modification system, site specificity determination subunit

NC_009641
(Staphylococcus aureus Newman)

4e-60

9) SAT0131_01927
( YP_005753066.1 )

Type I restriction modification system, site specificity determination subunit

NC_017347
(Staphylococcus aureus T0131)

4e-60

10) hsdS2
( YP_001575681.1 )

type I site-specific deoxyribonuclease specificity subunit

NC_010079
(Staphylococcus aureus TCH1516)

4e-60

11) SATW20_18040
( YP_005731792.1 )

type I restriction-modification system specificity protein

NC_017331
(Staphylococcus aureus TW20)

4e-60

12) SAOUHSC_01932
( YP_500433.1 )

type I restriction-modification system subunit S

NC_007795
(Staphylococcus aureus NCTC 8325)

9e-60

13) SAVC_08270
( YP_005291247.1 )

type I restriction-modification enzyme, S subunit, EcoA family protein

NC_016912
(Staphylococcus aureus VC40)

9e-60

14) SAS1731
( YP_043847.1 )

restriction modification DNA specificity protein

NC_002953
(Staphylococcus aureus MSSA476)

8e-54

15) hsdS
( NP_646567.1 )

specificity determinant HsdS

NC_003923
(Staphylococcus aureus MW2)

8e-54

16) hsdS
( YP_008168957.1 )

Type I restriction enzyme S protein

NC_021670
(Staphylococcus aureus Bmb9393)

1e-43

• Sequence Alignments

1) SAKOR_00416 in NC_022226


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  530 bits (2000),  Expect = 6e-152, Method: Compositional matrix adjust.
 Identities = 367/367 (100%), Positives = 367/367 (100%), Gaps = 0/367 (0%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVAKIYDGTHQTPKYTNEGIKFLSVENIKTLNS  60
            MSNTQKKNVPELRFPGFEGEWEEKKLGEVAKIYDGTHQTPKYTNEGIKFLSVENIKTLNS
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVAKIYDGTHQTPKYTNEGIKFLSVENIKTLNS  60

Query  61   SKYISEEAFEKEFKIRPEFGDILMTRIGDIGTPNIVSSNEKFAYYVSLALLKTKNLNSYF  120
            SKYISEEAFEKEFKIRPEFGDILMTRIGDIGTPNIVSSNEKFAYYVSLALLKTKNLNSYF
Sbjct  61   SKYISEEAFEKEFKIRPEFGDILMTRIGDIGTPNIVSSNEKFAYYVSLALLKTKNLNSYF  120

Query  121  LKNLILSSSIQNELWRKTLHVAFPkkinkneigkikinYPKKQEQQKIGQFFSKLDRQIe  180
            LKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKKQEQQKIGQFFSKLDRQIE
Sbjct  121  LKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKKQEQQKIGQFFSKLDRQIE  180

Query  181  leeqklellqqqkkGYMQKIFSQELRFKDENGNDYPEWEERRFADIFKFHNKLRKPIKEN  240
            LEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFADIFKFHNKLRKPIKEN
Sbjct  181  LEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFADIFKFHNKLRKPIKEN  240

Query  241  LRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVNNHAH  300
            LRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVNNHAH
Sbjct  241  LRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVNNHAH  300

Query  301  ILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVVISTNLEEQQKIGSFLS  360
            ILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVVISTNLEEQQKIGSFLS
Sbjct  301  ILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVVISTNLEEQQKIGSFLS  360

Query  361  KLDRQID  367
            KLDRQID
Sbjct  361  KLDRQID  367

2) M013TW_0393 in NC_016928


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  335 bits (1257),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 248/371 (67%), Positives = 288/371 (78%), Gaps = 28/371 (7%)

Query  1    MSNTQKKNVPELRFPEFEGEWEERKLGDLIKVNSGKD----YKH-----LDKGDIPVYGT  51
            MSNTQKKNVPELRFP FEGEWEE+KLG++ K+  G +    Y +     L   +I    +
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVAKIYDGTHQTPKYTNEGIKFLSVENIKTLNS  60

Query  52   GGYMTSVS-----EPLSEIDAVGIGRKGTINKPYLLEAPFWTVDTLFYCTP-----EKEA  101
            + Y++  +        +E++ + + R G I  P ++ +     + + Y  +      K+ 
Sbjct  61   SKYISEEAFEKEFKIRPEFGDILMTRIGDIGTPNIVSSN----EKFAYYVSLALLKTKNL  116

Query  102  DILFI--LSLFRKIN---WKLYDESTGVPSLSKQTINKINRLVPTNKEQQKIGEFFSKLD  156
            +  F+  L L   I+   W+   + +    ++K+ I KI+   P ++EQQKIG+FFSKLD
Sbjct  117  NSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKKQEQQKIGQFFSKLD  176

Query  157  RQIeleeqklellqqqkkGYMQKIFSQELRFKDENGEDYSEWEERRFADIFKFHNKLRKP  216
            RQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENG+DY+EWEERRFADIFKFHNKLRKP
Sbjct  177  RQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFADIFKFHNKLRKP  236

Query  217  IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN  276
            IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN
Sbjct  237  IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN  296

Query  277  NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIINVVISTNLEEQQKIG  336
            NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKII+VVISTNLEEQQKIG
Sbjct  297  NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVVISTNLEEQQKIG  356

Query  337  SFLSKLDRQID  347
            SFLSKLDRQID
Sbjct  357  SFLSKLDRQID  367

3) hsdS in NC_022443


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  335 bits (1257),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 248/371 (67%), Positives = 288/371 (78%), Gaps = 28/371 (7%)

Query  1    MSNTQKKNVPELRFPEFEGEWEERKLGDLIKVNSGKD----YKH-----LDKGDIPVYGT  51
            MSNTQKKNVPELRFP FEGEWEE+KLG++ K+  G +    Y +     L   +I    +
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVAKIYDGTHQTPKYTNEGIKFLSVENIKTLNS  60

Query  52   GGYMTSVS-----EPLSEIDAVGIGRKGTINKPYLLEAPFWTVDTLFYCTP-----EKEA  101
            + Y++  +        +E++ + + R G I  P ++ +     + + Y  +      K+ 
Sbjct  61   SKYISEEAFEKEFKIRPEFGDILMTRIGDIGTPNIVSSN----EKFAYYVSLALLKTKNL  116

Query  102  DILFI--LSLFRKIN---WKLYDESTGVPSLSKQTINKINRLVPTNKEQQKIGEFFSKLD  156
            +  F+  L L   I+   W+   + +    ++K+ I KI+   P ++EQQKIG+FFSKLD
Sbjct  117  NSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKKQEQQKIGQFFSKLD  176

Query  157  RQIeleeqklellqqqkkGYMQKIFSQELRFKDENGEDYSEWEERRFADIFKFHNKLRKP  216
            RQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENG+DY+EWEERRFADIFKFHNKLRKP
Sbjct  177  RQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFADIFKFHNKLRKP  236

Query  217  IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN  276
            IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN
Sbjct  237  IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN  296

Query  277  NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIINVVISTNLEEQQKIG  336
            NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKII+VVISTNLEEQQKIG
Sbjct  297  NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVVISTNLEEQQKIG  356

Query  337  SFLSKLDRQID  347
            SFLSKLDRQID
Sbjct  357  SFLSKLDRQID  367

4) hsdS in NC_022442


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  335 bits (1257),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 248/371 (67%), Positives = 288/371 (78%), Gaps = 28/371 (7%)

Query  1    MSNTQKKNVPELRFPEFEGEWEERKLGDLIKVNSGKD----YKH-----LDKGDIPVYGT  51
            MSNTQKKNVPELRFP FEGEWEE+KLG++ K+  G +    Y +     L   +I    +
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVAKIYDGTHQTPKYTNEGIKFLSVENIKTLNS  60

Query  52   GGYMTSVS-----EPLSEIDAVGIGRKGTINKPYLLEAPFWTVDTLFYCTP-----EKEA  101
            + Y++  +        +E++ + + R G I  P ++ +     + + Y  +      K+ 
Sbjct  61   SKYISEEAFEKEFKIRPEFGDILMTRIGDIGTPNIVSSN----EKFAYYVSLALLKTKNL  116

Query  102  DILFI--LSLFRKIN---WKLYDESTGVPSLSKQTINKINRLVPTNKEQQKIGEFFSKLD  156
            +  F+  L L   I+   W+   + +    ++K+ I KI+   P ++EQQKIG+FFSKLD
Sbjct  117  NSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKKQEQQKIGQFFSKLD  176

Query  157  RQIeleeqklellqqqkkGYMQKIFSQELRFKDENGEDYSEWEERRFADIFKFHNKLRKP  216
            RQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENG+DY+EWEERRFADIFKFHNKLRKP
Sbjct  177  RQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFADIFKFHNKLRKP  236

Query  217  IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN  276
            IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN
Sbjct  237  IKENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN  296

Query  277  NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIINVVISTNLEEQQKIG  336
            NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKII+VVISTNLEEQQKIG
Sbjct  297  NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVVISTNLEEQQKIG  356

Query  337  SFLSKLDRQID  347
            SFLSKLDRQID
Sbjct  357  SFLSKLDRQID  367

5) hsdS in NC_002951


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  225 bits (839),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 189/405 (47%), Positives = 280/405 (70%), Gaps = 22/405 (5%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQKKNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

6) BN843_18130 in NC_021059


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  225 bits (839),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 189/405 (47%), Positives = 280/405 (70%), Gaps = 22/405 (5%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQKKNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

7) hsdS in NC_009641


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  225 bits (839),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 189/405 (47%), Positives = 280/405 (70%), Gaps = 22/405 (5%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQKKNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

8) SAT0131_01927 in NC_017347


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  225 bits (839),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 189/405 (47%), Positives = 280/405 (70%), Gaps = 22/405 (5%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQKKNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

9) SATW20_18040 in NC_017331


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  225 bits (839),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 189/405 (47%), Positives = 280/405 (70%), Gaps = 22/405 (5%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQKKNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

10) hsdS in NC_007793


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  225 bits (839),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 189/405 (47%), Positives = 280/405 (70%), Gaps = 22/405 (5%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQKKNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

11) hsdS2 in NC_010079


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  225 bits (839),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 189/405 (47%), Positives = 280/405 (70%), Gaps = 22/405 (5%)

Query  1    MSNTQKKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQKKNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

12) SAOUHSC_01932 in NC_007795


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  224 bits (834),  Expect = 9e-60, Method: Compositional matrix adjust.
 Identities = 188/405 (47%), Positives = 279/405 (69%), Gaps = 22/405 (5%)

Query  1    MSNTQTKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQ KNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

13) SAVC_08270 in NC_016912


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  224 bits (834),  Expect = 9e-60, Method: Compositional matrix adjust.
 Identities = 188/405 (47%), Positives = 279/405 (69%), Gaps = 22/405 (5%)

Query  1    MSNTQTKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQ KNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRIELLKERKKGLLQKMFI  399
            I+  L EQ+K++++L  +D +++ + +++ELL++RKK+LL+ MF+
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKLELLQQRKKALLKLMFV  389

14) SAS1731 in NC_002953


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  204 bits (759),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 264/389 (68%), Gaps = 22/389 (5%)

Query  1    MSNTQTKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQ KNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRI  383
            I+  L EQ+K++++L  +D +++ + +++
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKL  373

15) hsdS in NC_003923


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  204 bits (759),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 264/389 (68%), Gaps = 22/389 (5%)

Query  1    MSNTQTKNVPELRFPGFEGEWEEKKLGNLTTKI--GSGKTPKGGSENYTNKGIPFLRSQN  58
            MSNTQ KNVPELRFPGFEGEWEEKKLG+++ KI  G+ +TPK     YTN GI FL  +N
Sbjct  1    MSNTQKKNVPELRFPGFEGEWEEKKLGEVA-KIYDGTHQTPK-----YTNEGIKFLSVEN  54

Query  59   IRNGKLNLNDLVYISKDIDDEMKNSRTYYGDVLLNITGASIGRTAINSIVETHANLNQHV  118
            I+     LN   YIS +  +   + R  +GD+L+    + IG  +  +IV ++ ++   V
Sbjct  55   IKT----LNSSKYISEEAFEKEFKIRPEFGDILM----TRIGDIGTPNIVSSNEKFAYYV  106

Query  119  CIIRLKKEYYYNFFGQYLLSRKGKRKIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQ  176
             +  LK     ++F + L+   + ++ +  ++   +    +N +EI+++KI  P   +EQ
Sbjct  107  SLALLKTKNLNSYFLKNLILSSSIQNELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQ  165

Query  177  QKIGKFFSKLDRQIeleeqklellqqqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKD  236
            QKIG+FFSKLDRQIELEEQKLELLQQQKKGYMQKIF+QELRFKDENG++YPEWE++ + D
Sbjct  166  QKIGQFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDENGNDYPEWEERRFAD  225

Query  237  IFIFENNRRKPITSSLREKGLYPYYGATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFET  295
            IF F+N+ RKPI  +LR KG YPYYGATGIIDYV D++F+  + LLIGEDGA+   +   
Sbjct  226  IFKFHNKLRKPIKENLRVKGSYPYYGATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAP  284

Query  296  SSFIANGQYWVNNHAHVVKSNDHNLFFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLK  355
              ++ NG++WVNNHAH++ + + N+ ++    ++ +   + TG A +KL   NL  I++ 
Sbjct  285  LVYLVNGKFWVNNHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVV  344

Query  356  IPC-LTEQDKVSALLKSIDNKMNNQMNRI  383
            I+  L EQ+K++++L  +D +++ + +++
Sbjct  345  ISTNLEEQQKIGSFLSKLDRQIDLEEQKL  373

16) hsdS in NC_021670


> NC_022226_P1|27|G27|537460160|YP_008490600.1|Staphylococcus_aureus_subsp._aureus_CN1|+|22669..23838|-|SAKOR_00416|Type 
I 
restriction-modification system specificity subunit
Length=389

 Score =  170 bits (627),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 141/320 (45%), Positives = 222/320 (70%), Gaps = 10/320 (3%)

Query  5    RTYYGDVLLNITGASIGRTAINSIVETHANLNQHVCIIRLKKEYYYNFFGQYLLSRKGKR  64
            R  +GD+L+    + IG  +  +IV ++ ++   V +  LK     ++F + L+   + +
Sbjct  76   RPEFGDILM----TRIGDIGTPNIVSSNEKFAYYVSLALLKTKNLNSYFLKNLILSSSIQ  131

Query  65   KIFLAQS--GGSREGLNFKEIANLKIFTPTIFEEQQKIGKFFSKLDRQIeleeqklellq  122
            + +  ++   +    +N +EI+++KI  P   +EQQKIG+FFSKLDRQIELEEQKLELLQ
Sbjct  132  NELWRKTLHVAFPKKINKNEIGKIKINYPKK-QEQQKIGQFFSKLDRQIELEEQKLELLQ  190

Query  123  qqkkGYMQKIFTQELRFKDENGEEYPEWENKFIKDIFIFENNRRKLITSSLREKGLYPYY  182
            QQKKGYMQKIF+QELRFKDENG++YPEWE++ + DIF F+N+ RK I  +LR KG YPYY
Sbjct  191  QQKKGYMQKIFSQELRFKDENGNDYPEWEERRFADIFKFHNKLRKPIKENLRVKGSYPYY  250

Query  183  GATGIIDYVKDYLFNNEERLLIGEDGAK-WGQFETSSFIANGQYWVNNHAHVVKSNDHNL  241
            GATGIIDYV D++F+  + LLIGEDGA+   +     ++ NG++WVNNHAH++ + + N+
Sbjct  251  GATGIIDYVDDFIFDG-NYLLIGEDGANIITRSAPLVYLVNGKFWVNNHAHILSPLNGNI  309

Query  242  FFMNYYLNFKELRAFVTGNAPAKLTHANLCNINLKIPC-LTEQDKVSALLKSIDNKMNNQ  300
             ++    ++ +   + TG A +KL   NL  I++ I+  L EQ+K++++L  +D +++ +
Sbjct  310  QYLYQVAELVNYEKYNTGTAQPKLNIQNLKIISVVISTNLEEQQKIGSFLSKLDRQIDLE  369

Query  301  MNRIELLKERKKGLLQKMFI  320
             +++ELL++RKK+LL+ MF+
Sbjct  370  EQKLELLQQRKKALLKLMFV  389