Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
pilin-related type II secretion protein |
NC_015761 (Salmonella bongori NCTC 12419) |
5e-90 |
45 |
|
Toxin co-regulated pilus biosynthesis proteinT putative ATP-binding translocase of TcpA |
NC_021870 (Salmonella bongori N268-08) |
1e-89 |
47 |
|
type II secretion system protein E |
NC_014618 (Enterobacter cloacae SCF1) |
9e-89 |
46 |
|
toxin co-regulated pilus biosynthesis protein T |
NC_017047 (Rahnella aquatilis HX2) |
3e-88 |
45 |
|
type II secretion system protein E |
NC_015061 (Rahnella sp. Y9602) |
3e-88 |
45 |
|
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
NC_020063 (Enterobacteriaceae bacterium FGI 57) |
1e-84 |
42 |
|
type IV pilus biogenesis protein CfcH |
NC_013716 (Citrobacter rodentium ICC168) |
2e-84 |
47 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_009457_P1' AND ph.id_pai_orf='27' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc