Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Type III secretion chaperone protein for YopD(SycD) |
NC_021870 (Salmonella bongori N268-08) |
6e-73 |
100 |
|
hypothetical protein |
NC_015761 (Salmonella bongori NCTC 12419) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021820 (Salmonella enterica 08-1736) |
6e-73 |
100 |
|
secretion chaperone |
NC_016856 (Salmonella enterica 14028S) |
6e-73 |
100 |
|
hypothetical protein |
NC_011274 (Salmonella enterica 287/91) |
6e-73 |
100 |
|
unknown function |
NC_022241 (Salmonella enterica 3114) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021810 (Salmonella enterica 41578) |
6e-73 |
100 |
|
type III secretion-associated chaperone |
NC_017046 (Salmonella enterica 798) |
6e-73 |
100 |
|
hypothetical protein |
NC_011147 (Salmonella enterica AKU12601) |
6e-73 |
100 |
|
hypothetical protein |
NC_006511 (Salmonella enterica ATCC 9150) |
6e-73 |
100 |
|
Type III secretion chaperone protein for YopD (SycD) |
NC_017623 (Salmonella enterica B182) |
6e-73 |
100 |
|
hypothetical protein |
NC_022221 (Salmonella enterica CDC1983-67) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021844 (Salmonella enterica CFSAN000189) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021814 (Salmonella enterica CFSAN001921) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_020307 (Salmonella enterica CFSAN001992) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021818 (Salmonella enterica CFSAN002050) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021812 (Salmonella enterica CFSAN002069) |
6e-73 |
100 |
|
unknown function |
NC_003198 (Salmonella enterica CT18) |
6e-73 |
100 |
|
type III secretion low calcium response chaperone LcrH/SycD |
NC_011205 (Salmonella enterica CT_02021853) |
6e-73 |
100 |
|
type III secretion low calcium response chaperone LcrH/SycD |
NC_011094 (Salmonella enterica CVM19633) |
6e-73 |
100 |
|
hypothetical protein |
NC_016854 (Salmonella enterica D23580) |
6e-73 |
100 |
|
secretion chaperone |
NC_003197 (Salmonella enterica LT2) |
6e-73 |
100 |
|
hypothetical protein |
NC_016832 (Salmonella enterica P-stx-12) |
6e-73 |
100 |
|
hypothetical protein |
NC_011294 (Salmonella enterica P125109) |
6e-73 |
100 |
|
hypothetical protein |
NC_012125 (Salmonella enterica RKS4594) |
6e-73 |
100 |
|
hypothetical protein |
NC_016831 (Salmonella enterica RKS5078) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021984 (Salmonella enterica S06004) |
6e-73 |
100 |
|
surface presentation of antigens; secretory proteins |
NC_006905 (Salmonella enterica SC-B67) |
6e-73 |
100 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
6e-73 |
100 |
|
type III secretion-associated chaperone |
NC_016810 (Salmonella enterica SL1344) |
6e-73 |
100 |
|
type III secretion low calcium response chaperone LcrH/SycD |
NC_011080 (Salmonella enterica SL254) |
6e-73 |
100 |
|
type III secretion low calcium response chaperone LcrH/SycD |
NC_011083 (Salmonella enterica SL476) |
6e-73 |
100 |
|
type III secretion low calcium response chaperone LcrH/SycD |
NC_011149 (Salmonella enterica SL483) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_016857 (Salmonella enterica ST4/74) |
6e-73 |
100 |
|
type III secretion low calcium response chaperone LcrH/SycD |
NC_016860 (Salmonella enterica T000240) |
6e-73 |
100 |
|
hypothetical protein |
NC_004631 (Salmonella enterica Ty2) |
6e-73 |
100 |
|
type III secretion low calcium response chaperone LcrH/SycD |
NC_021176 (Salmonella enterica Ty21a) |
6e-73 |
100 |
|
chaperone protein SicA |
NC_021151 (Salmonella enterica U288) |
6e-73 |
100 |
|
secretion chaperone |
NC_016863 (Salmonella enterica UK-1) |
6e-73 |
100 |
|
Chaperone protein sicA |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
6e-73 |
100 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
6e-73 |
99 |
|
surface presentation of antigens secretory protein |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
3e-58 |
83 |
|
chaperone protein IpgC |
NC_010660 (Shigella boydii CDC 3083-94) |
1e-43 |
60 |
|
IpgC |
NC_007607 (Shigella dysenteriae Sd197) |
1e-43 |
60 |
|
IpgC |
NC_017319 (Shigella flexneri 2002017) |
1e-43 |
60 |
|
IpgC, cytoplasmic chaperone for IpaB and IpaC |
NC_004851 (Shigella flexneri 301) |
1e-43 |
60 |
|
IpgC |
NC_007385 (Shigella sonnei Ss046) |
1e-43 |
60 |
|
type III secretion chaperone |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
3e-43 |
58 |
|
type III secretion chaperone |
NC_007712 (Sodalis glossinidius morsitans) |
7e-42 |
53 |
|
putative type III secretion apparatus protein |
NC_017731 (Providencia stuartii MRSN 2154) |
9e-41 |
55 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
5e-40 |
57 |
|
type III secretion chaperone SpaT |
NC_013961 (Erwinia amylovora CFBP1430) |
5e-40 |
57 |
|
putative type III secretion apparatus protein |
NC_008800 (Yersinia enterocolitica 8081) |
2e-39 |
52 |
|
type III secretion chaperone SpaT |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
2e-38 |
49 |
|
type III secretion chaperone |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
2e-38 |
49 |
|
protein YopD |
NC_016830 (Pseudomonas fluorescens F113) |
3e-38 |
57 |
|
Type III secretion chaperone |
NC_017445 (Erwinia sp. Ejp617) |
3e-38 |
50 |
|
type III secretion chaperone |
NC_010694 (Erwinia tasmaniensis Et1/99) |
3e-38 |
49 |
|
type III secretion chaperone |
NC_010694 (Erwinia tasmaniensis Et1/99) |
8e-38 |
50 |
|
type III secretion system chaperone protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
9e-38 |
51 |
|
type III secretion chaperone SpaT |
NC_013961 (Erwinia amylovora CFBP1430) |
9e-38 |
51 |
|
chaperone protein SicA |
NC_019670 (Pseudomonas sp. UW4) |
6e-37 |
55 |
|
chaperone protein |
NC_022000 (Proteus mirabilis BB2000) |
7e-36 |
54 |
|
chaperone protein |
NC_010554 (Proteus mirabilis HI4320) |
7e-36 |
54 |
|
putative type III secretion chaperone |
NC_017646 (Escherichia coli CE10) |
1e-27 |
48 |
|
putative type III secretion chaperone |
NC_011750 (Escherichia coli IAI39) |
1e-27 |
48 |
|
type III secretion-associated chaperone |
NC_017626 (Escherichia coli 042) |
9e-28 |
48 |
|
putative type III secretion chaperone |
NC_011751 (Escherichia coli UMN026) |
9e-28 |
48 |
|
type III secretion chaperone |
NC_007712 (Sodalis glossinidius morsitans) |
9e-28 |
44 |
|
putative type III secretion chaperone SicA |
NC_010498 (Escherichia coli SMS-3-5) |
2e-27 |
47 |
|
xsa-invasion chaperone protein |
NC_013722 (Xanthomonas albilineans GPE PC73) |
2e-27 |
47 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_003197_P3' AND ph.id_pai_orf='27' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc