Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
HrpT protein |
NC_005773 (Pseudomonas syringae 1448A) |
5e-21 |
72 |
|
type III secretion protein HrpT |
NC_007005 (Pseudomonas syringae B728a) |
6e-21 |
74 |
|
type III secretion protein |
NC_004578 (Pseudomonas syringae DC3000) |
4e-16 |
78 |
|
putative type III secretion lipoprotein |
NC_020209 (Pseudomonas poae RE*1-1-14) |
2e-08 |
43 |
|
type III secretion protein |
NC_015379 (Pseudomonas brassicacearum NFM421) |
4e-08 |
46 |
|
protein HrpT |
NC_016830 (Pseudomonas fluorescens F113) |
5e-08 |
48 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY597278' AND ph.id_pai_orf='27' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc