>AB120425|27|G27|46091607|BAD14045.1|Helicobacter_pylori_OK112|+|32980..36522|HP0547|-|cag
Length = 3543
Score = 835 bits (2155), Expect = e-242
Identities = 464/518 (90%)
Strand = Plus / Plus
Query: 56 cggcttttaatccacaacaatttatcaataatcttcaagtggcttttattaaacttgata 115
|||||||||| || || ||||||||||||||||||||||| |||||| ||||| ||||||
Sbjct: 41 cggcttttaacccgcagcaatttatcaataatcttcaagtagcttttcttaaagttgata 100
Query: 116 gtgctgtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggata 175
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 101 acgctgtcgcttcattcgatcctgatcaaaaaccaatcgttgataagaacgatagggata 160
Query: 176 acaggcaagcttttaatgtaatctcgcaattaagggaagaatacgccaataaagcgatca 235
|||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 161 acaggcaagcttttgatggaatctcgcaattaagggaagaatactccaataaagcgatca 220
Query: 236 aaaatcccaccaaaaagaatcagtatttttcagactttatcgataaaagcaatgatttga 295
||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| || |
Sbjct: 221 aaaatcctaccaaaaagaatcagtatttttcagactttatcaataagagcaatgagttaa 280
Query: 296 tcaacaaaaacgatctcattgatacagattcttccacaaagagctttgaaaaatttgggg 355
|||||||| || |||||||||| || |||||||||||||||||| | ||||||||||
Sbjct: 281 tcaacaaagacaatctcattgacgtggaatcttccacaaagagctttcagaaatttgggg 340
Query: 356 ctcagcgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatca 415
||||||||||| |||||| | | |||||||||||||||||| ||||||||||||||||
Sbjct: 341 atcagcgttaccgaattttcacaagttgggtgtcccatcaaaacgatccgtctaaaatca 400
Query: 416 acacccaaaaaatccgagattttatggaaaatatcatacaaccccctatctctgatgata 475
|||||| | |||||| ||||||||||| ||| |||||||||||||||| ||||||| |
Sbjct: 401 acacccgatcgatccgaaattttatggaacataccatacaaccccctatccctgatgaca 460
Query: 476 aagaaaaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcataggga 535
|||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 461 aagaaaaagcagagtttttgaaatccgccaaacaatcttttgcaggaatcatcataggga 520
Query: 536 accaaacccgatcggatgaaaaattcatgggcgttttt 573
| |||| |||| ||||| |||| ||||||||||| |||
Sbjct: 521 atcaaatccgaacggatcaaaagttcatgggcgtgttt 558
Score = 761 bits (1963), Expect = e-220
Identities = 418/461 (91%)
Strand = Plus / Plus
Query: 2081 agcggcaacaaaaataaaatggaagcgaaagttcaagctaacagccaaaaagatgggatt 2140
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 1906 agcggcaacaaaaataaaatggaagcaaaatctcaagctaacagccaaaaagatgagatt 1965
Query: 2141 tttaagcttatcaatgaagaggctcataaggaagcaagaatcgccgcttacgctcagaat 2200
||| | | |||||| |||||||| ||| ||| |||||| | |||||||||| |||
Sbjct: 1966 tttgcgttgatcaataaagaggctaatagggatgcaagagcaatcacttacgctcaaaat 2025
Query: 2201 cttaaaggcatcaggagggaattgtttgataaagttaaaaatctcaacaagaatttgaaa 2260
||||||||||||| |||||||||| ||||||| || ||||| |||||||| ||||||||
Sbjct: 2026 cttaaaggcatcaaaagggaattgtctgataaacttgaaaatatcaacaaggatttgaaa 2085
Query: 2261 gactttgataaatcttttgatgcgctcaaaagtggcaaaaataaggatttcagcaaggca 2320
|||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2086 gactttagtaaatcttttgatggattcaaaaatggcaaaaataaggatttcagcaaggca 2145
Query: 2321 gaagaaacgctaaaagcccttgaaagctcggtgaaagatttgggtatcaatccagaatgg 2380
||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||||||
Sbjct: 2146 gaagaaacgctaaaagcccttaaaggctcggtgaaagatttaggtatcaatccggaatgg 2205
Query: 2381 atttcaaaagttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaaataag 2440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2206 atttcaaaagttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaaataag 2265
Query: 2441 gatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatgtgctc 2500
||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | ||
Sbjct: 2266 gatttcagcaaggtaacgcaagcaaaaagcgaccttgaaaattccattaaagatgcgatc 2325
Query: 2501 atcaatcaagagataacggataaagttgacaatctcaatca 2541
||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 2326 atcaatcaaaagataacggataaagttgatgatctcaatca 2366
Score = 651 bits (1680), Expect = e-187
Identities = 360/407 (88%)
Strand = Plus / Plus
Query: 1636 cactcttcaaggtaacctaaagcatgatggcgtgatgtttgtcaattattccaatttcaa 1695
|||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 1461 cactctccaaggtaacctaaaacatgatggcgtgatgtttgttaattattctaatttcaa 1520
Query: 1696 atacaccaacgcctccaagagtcctgatgagggtataggcgctacgaatggcgtttccca 1755
|||||||||||||||||||||||| || | ||| |||||| ||||||||||||||||||
Sbjct: 1521 atacaccaacgcctccaagagtcccaataaaggtgtaggcgttacgaatggcgtttccca 1580
Query: 1756 tttggaagcaaattttagcaaggtggctgtctttaatttgcctgatttaaatggtctcgc 1815
||| |||||| ||||||||||| |||||||||||||||||| |||||||| ||||||
Sbjct: 1581 tttagaagcaggctttagcaaggtagctgtctttaatttgcctaatttaaataatctcgc 1640
Query: 1816 tatctctagttttgcaaggcggaatttagaggataaactgatcgctaaaggattgccccc 1875
|||| || | | | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 1641 tatcactggagtcgtaaggcgggatttagaggataaactaatcgctaaaggattgtcccc 1700
Query: 1876 aaaagacgctaataagatcatcaaagactttttgaacagcaacaaggaattgcttgaaaa 1935
| |||| |||||||| || ||||||||||||||| ||||||||| |||||| ||| |||
Sbjct: 1701 acaagaagctaataaactcgtcaaagactttttgagcagcaacaaagaattggttggaaa 1760
Query: 1936 agctttagacttcaataaagctgtagctgaagctaaaaatacaggcaattatgacggagt 1995
||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 1761 agctttaaacttcaataaagctgtagctgaagctaaaaacacaggcaactatgacgaggt 1820
Query: 1996 gaaaaaagctcaaaaagatcttgaaaaatctataaggaaacgagagc 2042
|||| | |||| |||||||||||||||||| ||| |||||||||||
Sbjct: 1821 gaaacgaactcagaaagatcttgaaaaatctctaaagaaacgagagc 1867
Score = 544 bits (1404), Expect = e-155
Identities = 322/366 (88%)
Strand = Plus / Plus
Query: 1269 gaaatgggattaacaaccctagcttctatctctacaaaacagaccaactcacaggcttgg 1328
|||| ||||||||||||||||| || |||||||||||| ||||||||||||||| |
Sbjct: 1095 gaaa-gggattaacaaccctagtttttatctctacaaagaagaccaactcacaggttcac 1153
Query: 1329 aacaagcgttgagtcaagaagagatccaaaacaaagtggatttcatggaacttcttgcac 1388
||| ||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 1154 aacgagcattgagtcaagaagagatcctaaacaaagtagatttcatggaatttcttgcac 1213
Query: 1389 aaaacaacgctagattagataacttgagcgaggaagagaaagaaaagttccaaactgaga 1448
||||||| |||| |||||| |||||||||||| ||||||||||||| |||| ||||||||
Sbjct: 1214 aaaacaatgctaaattagacaacttgagcgagaaagagaaagaaaaattccgaactgaga 1273
Query: 1449 ttggaaatttccaaaaagaccctaaggcttatttagactccctagggaatgatcgcattg 1508
|| |||| ||||||||| ||||| ||||||||||| |||||||||||||||| ||||
Sbjct: 1274 ttaaggattttcaaaaagactctaagccttatttagacgccctagggaatgatcgtattg 1333
Query: 1509 cttttgtttctaaaaaagacc-aaaagcatttagctttggttactgagtttggtaatggg 1567
||||||||||||||||||||| |||| |||| |||||| | ||||||||| ||| |||
Sbjct: 1334 cttttgtttctaaaaaagacccaaaa-cattcagctttaatcactgagtttaataagggg 1392
Query: 1568 gaattgagctatactctcaaagattatgggaaaaaacaagatagagctttagatagggag 1627
|| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 1393 gatttgagctacactctcaaagattatgggaaaaaagcagataaagctttagatagggag 1452
Query: 1628 acaaaa 1633
| ||||
Sbjct: 1453 a-aaaa 1457
Score = 494 bits (1276), Expect = e-140
Identities = 267/291 (92%)
Strand = Plus / Plus
Query: 3017 gcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaaat 3076
|||||| | ||||||||||||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 3154 gcgaaactagacaattacgctactaacagccacacacgcattaacagcgatatcaaaaat 3213
Query: 3077 ggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggctcaag 3136
||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 3214 ggagcaatcaatgaaaaagcgaccggtatgctaacgcaaaaaaaccctgagtggctcaag 3273
Query: 3137 cttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggttatgat 3196
|| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||
Sbjct: 3274 ctcgtgaatgataagatagttgcgcataatgtaggaagcgttcctttgtcagagtatgat 3333
Query: 3197 aaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttccacc 3256
|||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 3334 aaaattggcttcaaccagaagaatatgaaagattattctgattcgttcaagttttccacc 3393
Query: 3257 aagttgagcaatgccgtaaaaaacattaagtctgactttaagcaactttta 3307
||||||| |||||| |||||| || ||||||||| ||||| |||| |||||
Sbjct: 3394 aagttgaacaatgctgtaaaagacgttaagtctggctttacgcaaatttta 3444
Score = 366 bits (944), Expect = e-101
Identities = 207/239 (87%)
Strand = Plus / Plus
Query: 2766 atctcggcggatcttcccctttgaaaaggtatgctaaagttgatgatctcagtaaggtag 2825
||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 2912 atctcggcggacctttccctttgaaaaggcatgataaagttgatgatctcagtaaggtag 2971
Query: 2826 ggctttcaagggagcaagaattgaatgagaaaattggcaatctcaatcaggcagtgtcag 2885
||||||||||| | ||||||||| | ||||||||| || ||||||||| || || |||
Sbjct: 2972 ggctttcaaggaatcaagaattggctcagaaaattgacagtctcaatcaagcggtatcaa 3031
Query: 2886 aagctaaagcaggttcttttggcaacctagaacaaatgatggatggactcaaagattcta 2945
||||||||||||||| ||||||||| ||||| |||| ||| || |||||||||||||
Sbjct: 3032 aagctaaagcaggtttttttggcaatctagagcaaacgatagacaagctcaaagattcta 3091
Query: 2946 caaaaaagaatgttgtgaatctatggtttgaaggtgcaagaaaagtgcctattagtttg 3004
||||| | ||| ||||||||||||| |||||||||||| |||||||||| |||||||
Sbjct: 3092 caaaacacaatcctgtgaatctatgggttgaaggtgcaaaaaaagtgcctgctagtttg 3150
Score = 347 bits (896), Expect = 8e-96
Identities = 195/227 (86%)
Strand = Plus / Plus
Query: 1034 tacaagttcaaccagttaccgattcacaataacgctctgtcttctatgctaatggggagt 1093
||||||||||| || ||| ||||||||||||||||||||||||| || |||||||||||
Sbjct: 859 tacaagttcaatcaattattgattcacaataacgctctgtcttctgtgttaatggggagt 918
Query: 1094 catagcagcatagaacctgaaaaagtttcattgttgtatggggataatggtggtcctgaa 1153
||| ||||||||||||||||||||||||| ||||||| || ||||||||| || |
Sbjct: 919 catgatggcatagaacctgaaaaagtttcattattgtatgcgggcaatggtggttttgga 978
Query: 1154 gctaggcatgattggaacgccaccgttggttataaaaaccaacaaggcaacaatgtggcc 1213
|| | ||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||
Sbjct: 979 gccaagcacgattggaacgccaccgttggtcataaagaccaacaaggtaacaatgtggct 1038
Query: 1214 acactcatcaatgcgcatcttaaaaacggcagcgggttagtcatagc 1260
||| | || |||| |||| | ||||||||||| || |||||||||||
Sbjct: 1039 acaataattaatgtgcatatgaaaaacggcagtggcttagtcatagc 1085
Score = 176 bits (453), Expect = 4e-44
Identities = 93/98 (95%)
Strand = Plus / Plus
Query: 936 ccacccacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgatt 995
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 731 ccactcacatacaaggcttaccgcctgaatctagggatttgcttgatgaaaggggtaatt 790
Query: 996 tttctaaattcactcttggtgatatggaaatgttggat 1033
||||||||||||||||||| |||||||||||||| |||
Sbjct: 791 tttctaaattcactcttggcgatatggaaatgttagat 828
Score = 131 bits (337), Expect = 1e-30
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 2689 ccctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggcaatcagatagccc 2748
||||||||||||| ||| ||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 2826 ccctttgaaaaggcatgataaagttgatgatctcagtaaggtagggcgatcggttagccc 2885
Query: 2749 tgaacccatttacgcta 2765
|||||||||||| ||||
Sbjct: 2886 tgaacccatttatgcta 2902
Score = 89 bits (229), Expect = 6e-18
Identities = 48/53 (91%)
Strand = Plus / Plus
Query: 3348 cggaacatggagttaaaaatattaatacaaaaagtggtttccagaaatcttaa 3400
||||||||||| | |||||| ||||||||||| |||||||||| |||||||||
Sbjct: 3491 cggaacatggaatcaaaaatgttaatacaaaaggtggtttccaaaaatcttaa 3543
Score = 85 bits (220), Expect = 6e-17
Identities = 48/54 (89%)
Strand = Plus / Plus
Query: 830 gatatttttttatcgtttgtatttaacaaagaacaatcttctgatctcaaagaa 883
|||||||||||||| ||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 625 gatatttttttatcatttatatttgacaaaaaacaatcttctgatgttaaagaa 678
Score = 79 bits (204), Expect = 5e-15
Identities = 44/48 (92%)
Strand = Plus / Plus
Query: 767 gatgaatctttgaaagagaggcaagaagcacaaaacaatggagagcct 814
||||||||||||||||| |||||||||||| |||| ||||||| ||||
Sbjct: 559 gatgaatctttgaaagaaaggcaagaagcagaaaaaaatggagggcct 606
Score = 37 bits (94), Expect = 3e-02
Identities = 20/22 (91%)
Strand = Plus / Plus
Query: 2635 tcaaaaaaatgaaagtttcaat 2656
||||||||||||| |||||||
Sbjct: 2466 tcaaaaaaatgaagatttcaat 2487
Score = 17 bits (44), Expect = 2e+04
Identities = 9/9 (100%)
Strand = Plus / Plus
Query: 2064 aaaaatttg 2072
|||||||||
Sbjct: 1888 aaaaatttg 1896
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 3314 tgcattt 3320
|||||||
Sbjct: 3450 tgcattt 3456
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 889 caatcaa 895
|||||||
Sbjct: 680 caatcaa 686 |