>AB120424|27|G27|46091579|BAD14018.1|Helicobacter_pylori_OK109|+|33143..36679|HP0547|-|cag
Length = 3537
Score = 2453 bits (6330), Expect = 0.0
Identities = 1362/1494 (91%)
Strand = Plus / Plus
Query: 1058 cacaataacgctctgtcttctatgctaatggggagtcatagcagcatagaacctgaaaaa 1117
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 898 cacaataacgctctgtcttctatgctaatggggagtcataataacatagaacctgaaaaa 957
Query: 1118 gtttcattgttgtatggggataatggtggtcctgaagctaggcatgattggaacgccacc 1177
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 958 gtttcattattgtatggggataatggtggtcttgaagctaggcatgattggaacgccacc 1017
Query: 1178 gttggttataaaaaccaacaaggcaacaatgtggccacactcatcaatgcgcatcttaaa 1237
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1018 gttggttataaaaaccaacaaggcaacaatgtggccacactcattaatgcgcatcttaat 1077
Query: 1238 aacggcagcgggttagtcatagcgggtaatggaaatgggattaacaaccctagcttctat 1297
|||||||| |||||||||||||| ||| || || ||| ||||||||||||| || |||
Sbjct: 1078 aacggcagtgggttagtcatagcaggtggtgagaaaggggttaacaaccctagtttttat 1137
Query: 1298 ctctacaaaacagaccaactcacaggcttggaacaagcgttgagtcaagaagagatccaa 1357
||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 1138 ctctataaagaagaccaactcacaggcttgaaacaagcaatgagtcaagaagagatccaa 1197
Query: 1358 aacaaagtggatttcatggaacttcttgcacaaaacaacgctagattagataacttgagc 1417
||||||||||||||||||||| ||||||||| |||||| |||| | ||||||||||||||
Sbjct: 1198 aacaaagtggatttcatggaatttcttgcacgaaacaatgctaaactagataacttgagc 1257
Query: 1418 gaggaagagaaagaaaagttccaaactgagattggaaatttccaaaaagaccctaaggct 1477
||| ||||||||||||| |||||||||||||||| | ||||||||||||||| |||||||
Sbjct: 1258 gagaaagagaaagaaaaattccaaactgagattgaatatttccaaaaagaccgtaaggct 1317
Query: 1478 tatttagactccctagggaatgatcgcattgcttttgtttctaaaaaagacc-aaaagca 1536
||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||
Sbjct: 1318 tatttagacgccctagggaatgatcacattgcttttgtttctaaaaaagacccaaaa-ca 1376
Query: 1537 tttagctttggttactgagtttggtaatggggaattgagctatactctcaaagattatgg 1596
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1377 tttagctttggttactgagtttggtaatggggaagtgagctatactctcaaagattatgg 1436
Query: 1597 gaaaaaacaagatagagctttagatagggagacaaaaaccactcttcaaggtaacctaaa 1656
|||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 1437 gaaaaaacaagataaagctttagatggggagacaaaaaccactcttcaaggtagcctaaa 1496
Query: 1657 gcatgatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaagag 1716
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1497 atatgatggcgtgatgtttgtcaattattctaatttcaaatacaccaacgcctccaagag 1556
Query: 1717 tcctgatgagggtataggcgctacgaatggcgtttcccatttggaagcaaattttagcaa 1776
|||| || |||| | ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1557 tcctaataagggcgtgggcgctacgaatggcgtttcccatttggaggcaaattttagcaa 1616
Query: 1777 ggtggctgtctttaatttgcctgatttaaatggtctcgctatctctagttttgcaaggcg 1836
||| |||||||||||||| ||| |||||||| |||||||||| ||| || | ||||||
Sbjct: 1617 ggtagctgtctttaatttacctaatttaaataatctcgctatcactaattatataaggcg 1676
Query: 1837 gaatttagaggataaactgatcgctaaaggattgcccccaaaagacgctaataagatcat 1896
||||||| |||||| || |||| ||||||| ||||| |||| ||||||||| ||||
Sbjct: 1677 agatttagaagataaattgtgggctagaggattgtccccacaagaagctaataagctcat 1736
Query: 1897 caaagactttttgaacagcaacaaggaattgcttgaaaaagctttagacttcaataaagc 1956
|||||||||||||||||||||||| ||| || ||| ||||| || | |||||||||||||
Sbjct: 1737 caaagactttttgaacagcaacaaagaaatggttggaaaagtttcaaacttcaataaagc 1796
Query: 1957 tgtagctgaagctaaaaatacaggcaattatgacggagtgaaaaaagctcaaaaagatct 2016
|||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 1797 tgtagctgaagctaaaaacacaggcaattatgatgaagtgaaaaaagctcagaaagatct 1856
Query: 2017 tgaaaaatctataaggaaacgagagcgtttagagcaagaaataacgaaaaaatttgagaa 2076
|||||||||| ||||||||||||||| ||||||| ||||| || |||||||||| ||||
Sbjct: 1857 tgaaaaatctctaaggaaacgagagcatttagagaaagaagtagcgaaaaaattggagag 1916
Query: 2077 caagagcggcaacaaaaataaaatggaagcgaaagttcaagctaacagccaaaaagatgg 2136
|| | || ||||||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct: 1917 cagaaacgacaacaaaaatagaatggaagcaaaagctcaagctaacagccaaaaagataa 1976
Query: 2137 gatttttaagcttatcaatgaagaggctcataaggaagcaagaatcgccgcttacgctca 2196
||||||| ||||||||| |||||||| ||||||||||||| | ||||| || ||
Sbjct: 1977 gatttttgcacttatcaatcaagaggctagtaaggaagcaagagcggtcgctttcgatcc 2036
Query: 2197 gaatcttaaaggcatcaggagggaattgtttgataaagttaaaaatctcaacaagaattt 2256
||||||||||||||||||||| ||||||| ||||||| || ||||| |||||||||||||
Sbjct: 2037 gaatcttaaaggcatcaggagcgaattgtctgataaacttgaaaatatcaacaagaattt 2096
Query: 2257 gaaagactttgataaatcttttgatgcgctcaaaagtggcaaaaataaggatttcagcaa 2316
||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||
Sbjct: 2097 gaaagactttggcaaatcttttgatgaactcaaaaatggcaaaaataatgatttcagcaa 2156
Query: 2317 ggcagaagaaacgctaaaagcccttgaaag-ctcggtgaaagatttgggtatcaatccag 2375
||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||
Sbjct: 2157 ggcagaagaaacgctaaaagccctt-aaagactcggtgaaagatttaggcatcaatccag 2215
Query: 2376 aatggatttcaaaagttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaa 2435
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2216 aatggatttcaaaaattgaaaaccttaatgcagctttgaatgatttcaaaaatggcaaaa 2275
Query: 2436 ataaggatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatg 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2276 ataaggatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatg 2335
Query: 2496 tgctcatcaatcaagagataacggataaagttgacaatctcaatcaggctgtat 2549
|| |||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2336 tgatcattaatcaaaagataacggataaagttgacaatctcaatcaggctgtat 2389
Score = 961 bits (2479), Expect = e-280
Identities = 526/573 (92%)
Strand = Plus / Plus
Query: 1 atggctaacgaaaccatcaatcaaacaaaaaaaccagatcaaacaccaagccaaacggct 60
||| |||||||||| || ||||||||| || ||||||||||||||||| ||||| | |
Sbjct: 1 atgactaacgaaactattgatcaaacaacaacaccagatcaaacaccaaatcaaacagat 60
Query: 61 tttaatccacaacaatttatcaataatcttcaagtggcttttattaaacttgatagtgct 120
||| ||| ||||||||||||||||||||||| || |||||| ||||| |||||| |||
Sbjct: 61 tttgttccgcaacaatttatcaataatcttcaggtagcttttcttaaagttgataacgct 120
Query: 121 gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggataacagg 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaatgatagggataacagg 180
Query: 181 caagcttttaatgtaatctcgcaattaagggaagaatacgccaataaagcgatcaaaaat 240
||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 caagcttttgagaaaatctcgcaactaagggaagaatacgccaataaagcgatcaaaaat 240
Query: 241 cccaccaaaaagaatcagtatttttcagactttatcgataaaagcaatgatttgatcaac 300
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 241 cccaccaaaaagaatcagtatttttcagactttatcaataagagcaatgatttgatcaac 300
Query: 301 aaaaacgatctcattgatacagattcttccacaaagagctttgaaaaatttggggctcag 360
||| || |||| |||| | |||||||||| | |||||||| |||||||||| ||||
Sbjct: 301 aaagacaatcttattgctgtagattcttccgtagagagctttcggaaatttggggatcag 360
Query: 361 cgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaacacc 420
|||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 cgttaccaaatttttacgagttgggtgtcccttcaaaaagatccgtctaaaatcaacacc 420
Query: 421 caaaaaatccgagattttatggaaaatatcatacaaccccctatctctgatgataaagaa 480
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caacaaatccgaaattttatggaaaatatcatacaaccccctatctctgatgataaagaa 480
Query: 481 aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaa 540
Query: 541 acccgatcggatgaaaaattcatgggcgttttt 573
| ||||||||||||||||||||||||||| |||
Sbjct: 541 atccgatcggatgaaaaattcatgggcgtgttt 573
Score = 503 bits (1298), Expect = e-142
Identities = 266/277 (96%)
Strand = Plus / Plus
Query: 3013 gcaagcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaa 3072
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3141 gcaagcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcca 3200
Query: 3073 aaatggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggct 3132
|| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 3201 aactggaacaatcaatgaaaaagcgaccggtatgctaacgcaaaaaaaccctgagtggct 3260
Query: 3133 caagcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggtta 3192
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3261 caagctcgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcagagta 3320
Query: 3193 tgataaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttc 3252
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 3321 tgataaaattggattcaaccaaaagaatatgaaagattattctgattcgttcaagttttc 3380
Query: 3253 caccaagttgagcaatgccgtaaaaaacattaagtct 3289
||||||||||| ||||||||||||| |||||||||||
Sbjct: 3381 caccaagttgaacaatgccgtaaaagacattaagtct 3417
Score = 366 bits (945), Expect = e-101
Identities = 201/217 (93%)
Strand = Plus / Plus
Query: 817 tggggattggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctgatct 876
||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||
Sbjct: 627 tggggattggcttgatatttttttatcatttgtgtttaacaaaaaacaatcttccgatct 686
Query: 877 caaagaaacgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctctacccc 936
||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 687 caaagaaacgctcaatcaagagccaaggcctgattttgaacaaaatttagccactaccac 746
Query: 937 cacccacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgattt 996
||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 747 aaccgacatacaaggcttaccgcctgaagctagagatttgcttgatgaaaggggtaattt 806
Query: 997 ttctaaattcactcttggtgatatggaaatgttggat 1033
|| ||||||||||||||||||| |||| |||||||||
Sbjct: 807 ttttaaattcactcttggtgatgtggagatgttggat 843
Score = 263 bits (678), Expect = 2e-70
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 2782 ccctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggctttcaagggagca 2841
|||||||| ||| |||| |||| ||| ||||||||| ||||||||||||||||| ||
Sbjct: 2919 ccctttgagaagaagtgctccagttaatgttctcagtaaagtagggctttcaagggaaca 2978
Query: 2842 agaattgaatgagaaaattggcaatctcaatcaggcagtgtcagaagctaaagcaggttc 2901
|||||||| | | ||||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 2979 agaattgactcgtagaattggcgatctcagtcaggcagtgtcagaagctaaaacaggtca 3038
Query: 2902 ttttggcaacctagaacaaatgatggatggactcaaagattctacaaaaaagaatg 2957
||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||
Sbjct: 3039 ttttgacaacctagaacaaaagatagatgaactcaaagattctacaaaaaagaatg 3094
Score = 78 bits (202), Expect = 8e-15
Identities = 44/49 (90%)
Strand = Plus / Plus
Query: 767 gatgaatctttgaaagagaggcaagaagcacaaaacaatggagagcctg 815
||||||| ||||||||| |||||||||||| |||| |||| ||||||||
Sbjct: 574 gatgaatttttgaaagaaaggcaagaagcagaaaaaaatgaagagcctg 622
Score = 76 bits (196), Expect = 5e-14
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 2566 aggcgattttagtggggtagagcaagagctagccaaactcaaaagcttctc 2616
||||||||| ||| ||||||||||| |||||| ||||||||||||| ||
Sbjct: 2406 aggcgatttcagtaaggtagagcaagccctagccgaactcaaaagcttgtc 2456
Score = 60 bits (156), Expect = 2e-09
Identities = 32/33 (97%)
Strand = Plus / Plus
Query: 2733 ggcaatcagatagccctgaacccatttacgcta 2765
||||||||| |||||||||||||||||||||||
Sbjct: 2852 ggcaatcagctagccctgaacccatttacgcta 2884
Score = 49 bits (126), Expect = 7e-06
Identities = 26/28 (93%)
Strand = Plus / Plus
Query: 3345 aagcggaacatggagttaaaaatattaa 3372
|||||||||||||||| ||||||| |||
Sbjct: 3510 aagcggaacatggagtcaaaaatactaa 3537
Score = 32 bits (83), Expect = 7e-01
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 1034 tacaagttcaaccagtta 1051
||||||||||| ||||||
Sbjct: 874 tacaagttcaatcagtta 891
Score = 28 bits (73), Expect = 9e+00
Identities = 15/16 (94%)
Strand = Plus / Plus
Query: 2988 aagtgcctattagttt 3003
||||||||||| ||||
Sbjct: 3125 aagtgcctattggttt 3140
Score = 16 bits (41), Expect = 5e+04
Identities = 14/18 (78%)
Strand = Plus / Plus
Query: 2629 attggatc----aaaaaa 2642
|||||||| ||||||
Sbjct: 2457 attggatcttggaaaaaa 2474
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2972 tttgaag 2978
|||||||
Sbjct: 3096 tttgaag 3102
|
