>AB120421|27|G27|46091493|BAD13935.1|Helicobacter_pylori_F80|+|33015..36683|HP0547|-|cag
Length = 3669
Score = 2539 bits (6553), Expect = 0.0
Identities = 1410/1560 (90%)
Strand = Plus / Plus
Query: 1034 tacaagttcaaccagttaccgattcacaataacgctctgtcttctatgctaatggggagt 1093
||||||||||| |||||| ||| |||||||||||| | |||||| ||||||||||||||
Sbjct: 859 tacaagttcaatcagttattgatccacaataacgctttatcttctgtgctaatggggagt 918
Query: 1094 catagcagcatagaacctgaaaaagtttcattgttgtatggggataatggtggtcctgaa 1153
|||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 919 cataataacatagaacctgaaaaagtttcattattgtatggggataatggtggtcctgaa 978
Query: 1154 gctaggcatgattggaacgccaccgttggttataaaaaccaacaaggcaacaatgtggcc 1213
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 979 gctaggcatgattggaacgccaccgttggttataaagaccaacaaggtaacaatgtggcc 1038
Query: 1214 acactcatcaatgcgcatcttaaaaacggcagcgggttagtcatagcgggtaatggaaat 1273
|||||||| |||||||||||||| |||||||| |||||| ||||||||||||||| ||
Sbjct: 1039 acactcattaatgcgcatcttaataacggcagtgggttaatcatagcgggtaatgaggat 1098
Query: 1274 gggattaacaaccctagcttctatctctacaaaacagaccaactcacaggcttggaacaa 1333
|||||||| |||||||||||||||||||| ||| ||| ||||||||||| ||| |||||
Sbjct: 1099 gggattaaaaaccctagcttctatctctataaagaagatcaactcacaggtttgaaacaa 1158
Query: 1334 gcgttgagtcaagaagagatccaaaacaaagtggatttcatggaacttcttgcacaaaac 1393
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 1159 gcattgagtcaagaagagatccaaaacaaagtggatttcatggaatttcttgcacgaaac 1218
Query: 1394 aacgctagattagataacttgagcgaggaagagaaagaaaagttccaaactgagattgga 1453
|| |||| | |||||||||||||| || ||||||||||||| |||||||||||||||| |
Sbjct: 1219 aatgctaaactagataacttgagcaagaaagagaaagaaaaattccaaactgagattgaa 1278
Query: 1454 aatttccaaaaagaccctaaggcttatttagactccctagggaatgatcgcattgctttt 1513
|||||||||||| |||||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 1279 aatttccaaaaaaaccctaaggcttatttggacgctctggggaatgatcgcattgctttt 1338
Query: 1514 gtttctaaaaaagacc-aaaagcatttagctttggttactgagtttggtaatggggaatt 1572
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 1339 gtttctaaaaaagacccaaaa-catttagctttggttactgagtttggtaatggggaagt 1397
Query: 1573 gagctatactctcaaagattatgggaaaaaacaagatagagctttagatagggagacaaa 1632
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 1398 gagctatactctcaaagattatgggaaaaaacaagataaagctttagatggggagacaaa 1457
Query: 1633 aaccactcttcaaggtaacctaaagcatgatggcgtgatgtttgtcaattattccaattt 1692
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 1458 aaccactcttcaaggtaacctaaaatatgatggcgtgatgtttgtcaattattctaattt 1517
Query: 1693 caaatacaccaacgcctccaagagtcctgatgagggtataggcgctacgaatggcgtttc 1752
|||||||||||||||||||||||||||| || |||| | || |||||||||||||||||
Sbjct: 1518 caaatacaccaacgcctccaagagtcctaataagggcgtgggtgctacgaatggcgtttc 1577
Query: 1753 ccatttggaagcaaattttagcaaggtggctgtctttaatttgcctgatttaaatggtct 1812
|||||||||||| |||||||||||||| |||||||||||||||||| |||||||| |||
Sbjct: 1578 ccatttggaagcgaattttagcaaggtagctgtctttaatttgcctaatttaaataatct 1637
Query: 1813 cgctatctctagttttgcaaggcggaatttagaggataaactgatcgctaaaggattgcc 1872
||||||| ||| || | |||||| ||||||| |||||| || |||||||||||| |
Sbjct: 1638 cgctatcactaattatataaggcgagatttagaagataaattgtgggctaaaggattgtc 1697
Query: 1873 cccaaaagacgctaataagatcatcaaagactttttgaacagcaacaaggaattgcttga 1932
|||| |||| |||| |||| |||||||||||||||||||||||||||| ||||| |||
Sbjct: 1698 cccacaagaagctagtaagctcatcaaagactttttgaacagcaacaaagaattagttgg 1757
Query: 1933 aaaagctttagacttcaataaagctgtagctgaagctaaaaatacaggcaattatgacgg 1992
|||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1758 aaaaactttaaacttcaataaagctgtagctgaagctaaaaacacaggcaattatgatgg 1817
Query: 1993 agtgaaaaaagctcaaaaagatcttgaaaaatctataaggaaacgagagcgtttagagca 2052
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 1818 agtgaaaaaagctcagaaagatcttgaaaaatctataaggaaacgagagcatttagagaa 1877
Query: 2053 agaaataacgaaaaaatttgagaacaagagcggcaacaaaaataaaatggaagcgaaagt 2112
|||| || |||||||||| |||| || | || ||||||||||| ||||||||| ||||
Sbjct: 1878 agaagtagcgaaaaaattggagagcagaaacgacaacaaaaatagaatggaagcaaaagc 1937
Query: 2113 tcaagctaacagccaaaaagatgggatttttaagcttatcaatgaagaggctcataagga 2172
|||||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||
Sbjct: 1938 tcaagctaacagccaaaaagataagatttttgcacttatcaatcaagaggctagtaagga 1997
Query: 2173 agcaagaatcgccgcttacgctcagaatcttaaaggcatcaggagggaattgtttgataa 2232
||||||| ||||||| || || || ||||||||| |||||||| ||||||| ||||||
Sbjct: 1998 agcaagagcagccgctttcgatccgagtcttaaaggtatcaggagcgaattgtctgataa 2057
Query: 2233 agttaaaaatctcaacaagaatttgaaagactttgataaatcttttgatgcgctcaaaag 2292
| || ||||| |||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 2058 acttgaaaatatcaacaagaatttgaaagactttggcaaatcttttgatgaactcaaaaa 2117
Query: 2293 tggcaaaaataaggatttcagcaaggcagaagaaacgctaaaagcccttgaaag-ctcgg 2351
|||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 2118 tggcaaaaataatgatttcagcaaggcagaagaaacgctaaaagtcctt-aaagactcgg 2176
Query: 2352 tgaaagatttgggtatcaatccagaatggatttcaaaagttgaaaaccttaatgcagctt 2411
|||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2177 tgaaagatttagccatcaatccagaatggatttcaaaaattgaaaaccttaatgcagctt 2236
Query: 2412 tgaatgaattcaaaaatggcaaaaataaggatttcagcaaggtaacacaagcaaaaagcg 2471
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 tgaatgatttcaaaaatggcaaaaataaggatttcagcaaggtaacacaagcaaaaagcg 2296
Query: 2472 accttgaaaattccattaaggatgtgctcatcaatcaagagataacggataaagttgaca 2531
||||||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||
Sbjct: 2297 accttgaaaattctattaaggatgtgatcattaatcaaaagataacggataaagttgaca 2356
Query: 2532 atctcaatcaggctgtattaagggctaaagcgataggcgattttagtggggtagagcaag 2591
|||||||||||||||||| | | ||||| | ||||||||| ||| |||||||||||
Sbjct: 2357 atctcaatcaggctgtatcagagactaaattaacaggcgatttcagtaaggtagagcaag 2416
Score = 844 bits (2178), Expect = e-245
Identities = 467/518 (90%)
Strand = Plus / Plus
Query: 56 cggcttttaatccacaacaatttatcaataatcttcaagtggcttttattaaacttgata 115
|||||||||| || || |||||||||||||||||||| || |||||| |||| |||||||
Sbjct: 41 cggcttttaacccgcagcaatttatcaataatcttcaggtagcttttcttaagcttgata 100
Query: 116 gtgctgtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggata 175
|| || |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 101 actctatcacttcatttgatcccgatcaaaaaccaatcgttgataagaatgatagggata 160
Query: 176 acaggcaagcttttaatgtaatctcgcaattaagggaagaatacgccaataaagcgatca 235
|||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 161 acaggcaagcttttgatgaaatctcgcaattaagggaagaatactccaataaagcgatca 220
Query: 236 aaaatcccaccaaaaagaatcagtatttttcagactttatcgataaaagcaatgatttga 295
||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||| |
Sbjct: 221 aaaatcctaccaaaaagaatcagtatttttcagactttatcaataagagcaataatttaa 280
Query: 296 tcaacaaaaacgatctcattgatacagattcttccacaaagagctttgaaaaatttgggg 355
|||||||| ||| |||||||||| ||| |||||||||||||||||| | || |||||||
Sbjct: 281 tcaacaaagacgctctcattgatgtagaatcttccacaaagagctttcagaagtttgggg 340
Query: 356 ctcagcgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatca 415
||||||||||| |||||| | | |||||||||||||||||| ||||||||||||||||
Sbjct: 341 atcagcgttaccgaattttcacaagttgggtgtcccatcaaaacgatccgtctaaaatca 400
Query: 416 acacccaaaaaatccgagattttatggaaaatatcatacaaccccctatctctgatgata 475
|||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 acacccgatcgatccgaaattttatggaaaatatcatacaaccccctatctctgatgata 460
Query: 476 aagaaaaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcataggga 535
|||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| |
Sbjct: 461 aagaaaaagcagagtttttgaaatctgccaaacaagcttttgcaggaattatcataggaa 520
Query: 536 accaaacccgatcggatgaaaaattcatgggcgttttt 573
|||| | |||||| ||| |||||||||||||||| |||
Sbjct: 521 accagatccgatcagatcaaaaattcatgggcgtgttt 558
Score = 487 bits (1258), Expect = e-138
Identities = 265/291 (91%)
Strand = Plus / Plus
Query: 3017 gcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaaat 3076
|||||| | |||||||||||||||||||| ||||||||||||||||||||| || |||||
Sbjct: 3280 gcgaaactagacaattacgctactaacagtcacacacgcattaatagcaatatccaaaat 3339
Query: 3077 ggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggctcaag 3136
||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 3340 ggagcaatcaatggaaaagcgaccggtatgctaacgcaaaaaaaccctgagtggctcaag 3399
Query: 3137 cttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggttatgat 3196
|| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||
Sbjct: 3400 ctcgtgaatgataagatagttgcgcataatgtaggaagcgttcctttgtcagagtatgat 3459
Query: 3197 aaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttccacc 3256
|||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 3460 aaaattggcttcaaccagaagaatatgaaagattattctgattcgttcaagttttccacc 3519
Query: 3257 aagttgagcaatgccgtaaaaaacattaagtctgactttaagcaactttta 3307
||||||| |||||| |||||| | ||||||||| ||||| |||| |||||
Sbjct: 3520 aagttgaacaatgctgtaaaagatgttaagtctggctttacgcaaatttta 3570
Score = 395 bits (1020), Expect = e-110
Identities = 234/270 (87%)
Strand = Plus / Plus
Query: 767 gatgaatctttgaaagagaggcaagaagcacaaaacaatggagagcc---tgttggggat 823
|||||||| |||||||| |||||||||||| |||| ||||||||||| || |||||||
Sbjct: 559 gatgaatccttgaaagaaaggcaagaagcagaaaaaaatggagagcctactggtggggat 618
Query: 824 tggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctgatctcaaagaa 883
||| | |||||||||||||| ||| ||||| ||||| |||||| ||||||| ||||||||
Sbjct: 619 tggttggatatttttttatcatttatatttcacaaaaaacaatattctgatgtcaaagaa 678
Query: 884 acgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctctacccccacccac 943
| |||||||||| ||| || ||||| ||| | || ||||| ||||| ||||||||
Sbjct: 679 gcaatcaatcaagaaccagttccccatgtccaaccagatatagccactaccaccacccac 738
Query: 944 atacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgatttttctaaa 1003
||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 739 atacaaggcttgccgcctgaatctagggatttgcttgatgaaaggggtaatttttctaaa 798
Query: 1004 ttcactcttggtgatatggaaatgttggat 1033
||||||||||| |||||||||||||| |||
Sbjct: 799 ttcactcttggcgatatggaaatgttagat 828
Score = 332 bits (856), Expect = 4e-91
Identities = 190/223 (85%)
Strand = Plus / Plus
Query: 2782 ccctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggctttcaagggagca 2841
|||||||| ||| |||| |||| || |||||||||||||||||||||||||||||||
Sbjct: 3054 ccctttgagaagaagtgctgcagttaataatctcagtaaggtagggctttcaagggagca 3113
Query: 2842 agaattgaatgagaaaattggcaatctcaatcaggcagtgtcagaagctaaagcaggttc 2901
| ||||||| |||| |||| ||||||||||||||| || |||||||||||||||||||
Sbjct: 3114 aaaattgaaacagaagattgacaatctcaatcaggcggtatcagaagctaaagcaggtta 3173
Query: 2902 ttttggcaacctagaacaaatgatggatggactcaaagattctacaaaaaagaatgttgt 2961
||||||||| |||||||||| ||| || ||||||||||||| |||||| ||| |||
Sbjct: 3174 ttttggcaatctagaacaaacgatagacaagctcaaagattctataaaaaacaattctgt 3233
Query: 2962 gaatctatggtttgaaggtgcaagaaaagtgcctattagtttg 3004
|||||||||| |||| |||||| |||||||||| |||||||
Sbjct: 3234 gaatctatgggctgaaagtgcaaaaaaagtgcctgctagtttg 3276
Score = 132 bits (340), Expect = 7e-31
Identities = 72/77 (94%)
Strand = Plus / Plus
Query: 2689 ccctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggcaatcagatagccc 2748
||||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 2832 ccctttgaaaaggcatactaaagttgatgatctcagtaaggtagggctttcagctagccc 2891
Query: 2749 tgaacccatttacgcta 2765
|||||||||||||||||
Sbjct: 2892 tgaacccatttacgcta 2908
Score = 88 bits (228), Expect = 8e-18
Identities = 48/54 (89%)
Strand = Plus / Plus
Query: 3347 gcggaacatggagttaaaaatattaatacaaaaagtggtttccagaaatcttaa 3400
||||| |||||| | |||||| ||||||||||| |||||||||| |||||||||
Sbjct: 3616 gcggagcatggaatcaaaaatgttaatacaaaaggtggtttccaaaaatcttaa 3669
Score = 59 bits (153), Expect = 4e-09
Identities = 34/37 (92%)
Strand = Plus / Plus
Query: 2729 gtagggcaatcagatagccctgaacccatttacgcta 2765
||||||| |||| |||||||||||||||||||||||
Sbjct: 2983 gtagggctttcagctagccctgaacccatttacgcta 3019
Score = 30 bits (78), Expect = 2e+00
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 2635 tcaaaaaaatgaaagt 2650
||||||||||||||||
Sbjct: 2466 tcaaaaaaatgaaagt 2481
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 3314 tgcattt 3320
|||||||
Sbjct: 3576 tgcattt 3582
|
