>AB120420|27|G27|46091465|BAD13908.1|Helicobacter_pylori_F79|+|33290..36940|HP0547|-|cag
Length = 3651
Score = 1526 bits (3938), Expect = 0.0
Identities = 847/955 (89%)
Strand = Plus / Plus
Query: 1637 actcttcaaggtaacctaaagcatgatggcgtgatgtttgtcaattattccaatttcaaa 1696
|||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||
Sbjct: 1462 actcttcaaggtaacctaaaatatgatggcgtgatgtttgttgattattctaatttcaaa 1521
Query: 1697 tacaccaacgcctccaagagtcctgatgagggtataggcgctacgaatggcgtttcccat 1756
||||||||||||||||||| ||| || ||||| | || |||||||||||||||||||||
Sbjct: 1522 tacaccaacgcctccaagaatcccaataagggtgtgggtgctacgaatggcgtttcccat 1581
Query: 1757 ttggaagcaaattttagcaaggtggctgtctttaatttgcctgatttaaatggtctcgct 1816
|| || ||| |||| |||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 1582 ttagacgcaggctttaacaaggtagctgtctttaatttgcctgatttaaataatctcgct 1641
Query: 1817 atctctagttttgcaaggcggaatttagaggataaactgatcgctaaaggattgccccca 1876
||| ||||||| | |||||||||||||||||||||||| | | ||||||||||| ||| |
Sbjct: 1642 atcactagtttcgtaaggcggaatttagaggataaactaaccactaaaggattgtcccta 1701
Query: 1877 aaagacgctaataagatcatcaaagactttttgaacagcaacaaggaattgcttgaaaaa 1936
|||| ||||||||| | |||||||| ||||||| ||||||||| |||||| ||| ||||
Sbjct: 1702 caagaagctaataagcttatcaaagattttttgagcagcaacaaagaattggttggaaaa 1761
Query: 1937 gctttagacttcaataaagctgtagctgaagctaaaaatacaggcaattatgacggagtg 1996
|||||| |||||||||||||||||||||| |||||||| |||||||| ||||||| |||
Sbjct: 1762 gctttaaacttcaataaagctgtagctgacgctaaaaacacaggcaactatgacgaggtg 1821
Query: 1997 aaaaaagctcaaaaagatcttgaaaaatctataaggaaacgagagcgtttagagcaagaa 2056
||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 1822 aaaaaagctcagaaagatcttgaaaaatctctaaggaaacgagagcatttagagaaagaa 1881
Query: 2057 ataacgaaaaaatttgagaacaagagcggcaacaaaaataaaatggaagcgaaagttcaa 2116
|| ||||||||| |||| ||| |||||||||||||||||||||||||| |||| ||||
Sbjct: 1882 gtagagaaaaaattggagagcaaaagcggcaacaaaaataaaatggaagcaaaagctcaa 1941
Query: 2117 gctaacagccaaaaagatgggatttttaagcttatcaatgaagaggctcataaggaagca 2176
||||||||||||||||||| |||||||| | | |||||| |||||||| ||| ||| |||
Sbjct: 1942 gctaacagccaaaaagatgagatttttatgttaatcaataaagaggctaatagggacgca 2001
Query: 2177 agaatcgccgcttacgctcagaatcttaaaggcatcaggagggaattgtttgataaagtt 2236
||| | || |||||| ||||||||||||||||| |||||||||| ||||||| ||
Sbjct: 2002 agagcaatcatttgcgctcaaaatcttaaaggcatcagaagggaattgtctgataaactt 2061
Query: 2237 aaaaatctcaacaagaatttgaaagactttgataaatcttttgatgcgctcaaaagtggc 2296
||||| |||||||| |||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 2062 gaaaatgtcaacaaggatttgaaagactttagtaaatcttttgatgaattcaaaaatggc 2121
Query: 2297 aaaaataaggatttcagcaaggcagaagaaacgctaaaagcccttgaaagctcggtgaaa 2356
|||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||
Sbjct: 2122 aaaaataaggatttcagcaaggcagaagaaacactaaaagcccttaaaggctcggtgaaa 2181
Query: 2357 gatttgggtatcaatccagaatggatttcaaaagttgaaaaccttaatgcagctttgaat 2416
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 gatttaggtatcaatccagaatggatttcaaaagttgaaaaccttaatgcagctttgaat 2241
Query: 2417 gaattcaaaaatggcaaaaataaggatttcagcaaggtaacacaagcaaaaagcgacctt 2476
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2242 gaattcaaaaatggcaaaaataaggatttcagcaaggtaacgcaagcaaaaagcgacctt 2301
Query: 2477 gaaaattccattaaggatgtgctcatcaatcaagagataacggataaagttgacaatctc 2536
|||||||||||||| |||| | || |||||||| ||||||||||||||||||| |||||
Sbjct: 2302 gaaaattccattaaagatgcgatcttcaatcaaaagataacggataaagttgatgatctc 2361
Query: 2537 aatcaggctgtattaagggctaaagcgataggcgattttagtggggtagagcaag 2591
||||| || |||| | ||||||||| | || ||||| ||| ||||||||||||
Sbjct: 2362 aatcaagcggtatcagtggctaaagcaacgggtgatttcagtagggtagagcaag 2416
Score = 814 bits (2101), Expect = e-236
Identities = 453/509 (89%)
Strand = Plus / Plus
Query: 57 ggcttttaatccacaacaatttatcaataatcttcaagtggcttttattaaacttgatag 116
||||||||| || || ||||||||||||||||||||||| |||||| |||| |||||||
Sbjct: 42 ggcttttaacccgcagcaatttatcaataatcttcaagtagcttttcttaagcttgataa 101
Query: 117 tgctgtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggataa 176
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 102 cgctgtcgcttcatttgatcctgatcaaaaaccaatcgttgataagaacgatagggataa 161
Query: 177 caggcaagcttttaatgtaatctcgcaattaagggaagaatacgccaataaagcgatcaa 236
||||||||||||| | |||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 162 caggcaagcttttgagaaaatctcgcaactaagggaagaatactccaataaagcgatcaa 221
Query: 237 aaatcccaccaaaaagaatcagtatttttcagactttatcgataaaagcaatgatttgat 296
|||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 222 aaatcctgccaaaaagaatcagtatttttcagactttatcaataagagcaatgatttgat 281
Query: 297 caacaaaaacgatctcattgatacagattcttccacaaagagctttgaaaaatttggggc 356
||||||| || ||||||||| | |||||||||| | |||||||| | ||||||||||
Sbjct: 282 caacaaagacaatctcattgctgtagattcttccgtagagagctttcagaaatttgggga 341
Query: 357 tcagcgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaa 416
|||||||||||||||||| | | ||||||||||| |||||| |||||||||||||||||
Sbjct: 342 tcagcgttaccaaattttcacaagttgggtgtcccttcaaaacgatccgtctaaaatcaa 401
Query: 417 cacccaaaaaatccgagattttatggaaaatatcatacaaccccctatctctgatgataa 476
||||| | |||||| ||||||||||| ||| |||||||||||||||| ||||||| ||
Sbjct: 402 cacccgatcgatccgaaattttatggaacataccatacaaccccctatccctgatgacaa 461
Query: 477 agaaaaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaa 536
||||||||| |||||||||| |||||||| ||||||||||||||||| || ||||||||
Sbjct: 462 agaaaaagcagagtttttgaaatctgccaagcaatcttttgcaggaatcattatagggaa 521
Query: 537 ccaaacccgatcggatgaaaaattcatgg 565
|||| |||| ||||| |||| |||||||
Sbjct: 522 tcaaatccgaacggatcaaaagttcatgg 550
Score = 566 bits (1460), Expect = e-161
Identities = 329/366 (90%)
Strand = Plus / Plus
Query: 1269 gaaatgggattaacaaccctagcttctatctctacaaaacagaccaactcacaggcttgg 1328
|||| ||||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 1095 gaaa-gggattaacaaccctagtttttatctctacaaagaagaccaactcacaggctcac 1153
Query: 1329 aacaagcgttgagtcaagaagagatccaaaacaaagtggatttcatggaacttcttgcac 1388
||| ||| || |||||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 1154 aacgagcattaagtcaagaagagatccaaaacaaaatagatttcatggaatttcttgcac 1213
Query: 1389 aaaacaacgctagattagataacttgagcgaggaagagaaagaaaagttccaaactgaga 1448
|||| || |||| |||||| |||||||||||| ||||||||||||| || ||||||||||
Sbjct: 1214 aaaataatgctaaattagacaacttgagcgagaaagagaaagaaaaatttcaaactgaga 1273
Query: 1449 ttggaaatttccaaaaagaccctaaggcttatttagactccctagggaatgatcgcattg 1508
||| | |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1274 ttgaatatttccaaaaagactctaaggcttatttagacgccctagggaatgatcgtattg 1333
Query: 1509 cttttgtttctaaaaaagacc-aaaagcatttagctttggttactgagtttggtaatggg 1567
||||||||||||||||||||| |||| |||| |||||| ||||||||||||||||||||
Sbjct: 1334 cttttgtttctaaaaaagacccaaaa-cattcagctttaattactgagtttggtaatggg 1392
Query: 1568 gaattgagctatactctcaaagattatgggaaaaaacaagatagagctttagatagggag 1627
|| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 1393 gatttgagctacactctcaaagattatgggaaaaaagcagataaagctttagatagggag 1452
Query: 1628 acaaaa 1633
| ||||
Sbjct: 1453 a-aaaa 1457
Score = 505 bits (1303), Expect = e-143
Identities = 272/292 (93%)
Strand = Plus / Plus
Query: 3016 agcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaaa 3075
|||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||
Sbjct: 3261 agcgaaattggacaattacgctactaacagccacacacgcattaatagcaatatccacaa 3320
Query: 3076 tggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggctcaa 3135
|||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 3321 tggagcaatcaatgaaaaagcgaccggtatgctaacgcaaaaaaaccctgagtggctcaa 3380
Query: 3136 gcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggttatga 3195
||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 3381 gctcgtgaatgataagatagttgcgcataatgtaggaagcgttcctttgtcagagtatga 3440
Query: 3196 taaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttccac 3255
||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3441 taaaattggcttcaaccagaagaatatgaaagattattctgattcgttcaggttttccac 3500
Query: 3256 caagttgagcaatgccgtaaaaaacattaagtctgactttaagcaactttta 3307
|||||||| |||||| ||||||||| ||||||||| ||||| |||| |||||
Sbjct: 3501 caagttgaacaatgctgtaaaaaacgttaagtctggctttacgcaattttta 3552
Score = 395 bits (1020), Expect = e-110
Identities = 234/270 (87%)
Strand = Plus / Plus
Query: 767 gatgaatctttgaaagagaggcaagaagcacaaaacaatggagagcc---tgttggggat 823
|||||||| |||||||| |||||||||||| |||| ||||||||||| || |||||||
Sbjct: 559 gatgaatccttgaaagaaaggcaagaagcagaaaaaaatggagagcctgctggtggggat 618
Query: 824 tggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctgatctcaaagaa 883
||| | ||||||||| | || ||| ||||| ||||| |||||||||||||| ||||||||
Sbjct: 619 tggttggatatttttctctcatttatatttgacaaaaaacaatcttctgatgtcaaagaa 678
Query: 884 acgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctctacccccacccac 943
| |||||||||| ||| || |||||| ||| | || ||||| ||||| ||||| ||
Sbjct: 679 gcaatcaatcaagaaccagttccccatgttcaaccagatatagccactaccaccaccgac 738
Query: 944 atacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgatttttctaaa 1003
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 739 atacaaggcttaccgcctgaatctagggatttgcttgatgaaaggggtaatttttctaaa 798
Query: 1004 ttcactcttggtgatatggaaatgttggat 1033
||||||||||| |||||||||||||| |||
Sbjct: 799 ttcactcttggcgatatggaaatgttagat 828
Score = 387 bits (997), Expect = e-107
Identities = 214/241 (89%)
Strand = Plus / Plus
Query: 2766 atctcggcggatcttcccctttgaaaaggtatgctaaagttgatgatctcagtaaggtag 2825
||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 3020 atctcggcggacctttccctttgaaaaggcatgataaagttgatgatctcagtaaggtag 3079
Query: 2826 ggctttcaagggagcaagaattgaatgagaaaattggcaatctcaatcaggcagtgtcag 2885
|||||||||||| |||||||||| | ||||||||| ||||||||||||||| || ||||
Sbjct: 3080 ggctttcaagggggcaagaattggctcagaaaattgacaatctcaatcaggcggtatcag 3139
Query: 2886 aagctaaagcaggttcttttggcaacctagaacaaatgatggatggactcaaagattcta 2945
||||||||||||||| |||||||||||||||||||| ||| || |||||||||||||
Sbjct: 3140 aagctaaagcaggttattttggcaacctagaacaaaagatagacaagctcaaagattcta 3199
Query: 2946 caaaaaagaatgttgtgaatctatggtttgaaggtgcaagaaaagtgcctattagtttgc 3005
||||||| ||| ||||||||||||| ||||| |||||| |||||||||| |||||||
Sbjct: 3200 caaaaaacaatactgtgaatctatggcttgaaagtgcaaaaaaagtgcctgctagtttgt 3259
Query: 3006 c 3006
|
Sbjct: 3260 c 3260
Score = 352 bits (909), Expect = 3e-97
Identities = 197/227 (87%)
Strand = Plus / Plus
Query: 1034 tacaagttcaaccagttaccgattcacaataacgctctgtcttctatgctaatggggagt 1093
||||||||||| || ||| ||||||||||||||||||||||||| || |||||||||||
Sbjct: 859 tacaagttcaatcaattattgattcacaataacgctctgtcttctgtgttaatggggagt 918
Query: 1094 catagcagcatagaacctgaaaaagtttcattgttgtatggggataatggtggtcctgaa 1153
|||| ||||||||||||||||||||||||| ||||||| || ||||||||| || |
Sbjct: 919 cataatggcatagaacctgaaaaagtttcattattgtatgcgggcaatggtggttttgga 978
Query: 1154 gctaggcatgattggaacgccaccgttggttataaaaaccaacaaggcaacaatgtggcc 1213
|| | ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 979 gccaagcacgattggaacgccaccgttggttataaagaccaacaaggtaacaatgtggct 1038
Query: 1214 acactcatcaatgcgcatcttaaaaacggcagcgggttagtcatagc 1260
||| | || |||| |||| | ||||||||||| || |||||||||||
Sbjct: 1039 acaataattaatgtgcatatgaaaaacggcagtggcttagtcatagc 1085
Score = 188 bits (485), Expect = 7e-48
Identities = 101/109 (93%)
Strand = Plus / Plus
Query: 2657 tatgctacgattgatgatctcggcggatcttcccctttgaaaaggtatgctaaagttgat 2716
|||||||| |||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 2902 tatgctacaattgatgatctcggcggacctttccctttgaaaaggcatgataaagttgat 2961
Query: 2717 gatctcagtaaggtagggcaatcagatagccctgaacccatttacgcta 2765
||||||||||||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 2962 gatctcagtaaggtagggcgatcagctagccctgaacccatttatgcta 3010
Score = 42 bits (108), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2635 tcaaaaaaatgaaagtttcaat 2656
||||||||||||||||||||||
Sbjct: 2466 tcaaaaaaatgaaagtttcaat 2487
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 3314 tgcattt 3320
|||||||
Sbjct: 3558 tgcattt 3564
|
