>AB120418|27|G27|46091408|BAD13853.1|Helicobacter_pylori_F28|+|32991..36707|HP0547|-|cag
Length = 3717
Score = 2568 bits (6627), Expect = 0.0
Identities = 1430/1578 (91%)
Strand = Plus / Plus
Query: 1034 tacaagttcaaccagttaccgattcacaataacgctctgtcttctatgctaatggggagt 1093
||||||||||| || ||| ||| |||||||| ||| | |||||| ||||||||||| ||
Sbjct: 874 tacaagttcaatcaattattgatccacaataatgctttatcttctgtgctaatggggggt 933
Query: 1094 catagcagcatagaacctgaaaaagtttcattgttgtatggggataatggtggtcctgaa 1153
||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 934 catagtaacatagaacctgaaaaagtttcattattgtatggggataatggtggtcctgaa 993
Query: 1154 gctaggcatgattggaacgccaccgttggttataaaaaccaacaaggcaacaatgtggcc 1213
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 994 gctaggcatgattggaacgccaccgttggttataaagaccaacaaggcaacaatgtggcc 1053
Query: 1214 acactcatcaatgcgcatcttaaaaacggcagcgggttagtcatagcgggtaatggaaat 1273
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||
Sbjct: 1054 acactcatcaatgcgcatcttaataacggcagcgggttaatcatagcgggtaatgaggat 1113
Query: 1274 gggattaacaaccctagcttctatctctacaaaacagaccaactcacaggcttggaacaa 1333
|||||||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 1114 gggattaaaaaccctagcttctatctctataaagaagaccaactcacaggcttgaaacaa 1173
Query: 1334 gcgttgagtcaagaagagatccaaaacaaagtggatttcatggaacttcttgcacaaaac 1393
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1174 gcgttgagtcaagaagagatccaaaacaaagtggatttcatggaatttcttgcaaaaaat 1233
Query: 1394 aacgctagattagataacttgagcgaggaagagaaagaaaagttccaaactgagattgga 1453
||||||| |||||| |||||||||||| ||||||||||||| |||||||||||||||| |
Sbjct: 1234 aacgctaaattagacaacttgagcgagaaagagaaagaaaaattccaaactgagattgaa 1293
Query: 1454 aatttccaaaaagaccctaaggcttatttagactccctagggaatgatcgcattgctttt 1513
|||||||||||||||| |||||||||||| ||| | ||||||||||||| ||||||||||
Sbjct: 1294 aatttccaaaaagaccgtaaggcttatttggacgctctagggaatgatcacattgctttt 1353
Query: 1514 gtttctaaaaaagacc-aaaagcatttagctttggttactgagtttggtaatggggaatt 1572
|||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |
Sbjct: 1354 gtttctaaaaaagacccaaaa-catttagctttggttactgagtttagtaatggggaagt 1412
Query: 1573 gagctatactctcaaagattatgggaaaaaacaagatagagctttagatagggagacaaa 1632
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 1413 gagctatactctcaaagattatgggaaaaaacaagataaagctttagatggggagacaaa 1472
Query: 1633 aaccactcttcaaggtaacctaaagcatgatggcgtgatgtttgtcaattattccaattt 1692
||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1473 aaccacttttcaaggtagcctaaaatatgatggcgtgatgtttgtcaattattccaattt 1532
Query: 1693 caaatacaccaacgcctccaagagtcctgatgagggtataggcgctacgaatggcgtttc 1752
||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||
Sbjct: 1533 caaatacaccaacgcctccaagagtcctgataagggcgtgggcgctacgaatggcgtttc 1592
Query: 1753 ccatttggaagcaaattttagcaaggtggctgtctttaatttgcctgatttaaatggtct 1812
||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||
Sbjct: 1593 ccatttggaagcaaattttagcaaggtagctgtctttaatttgcctaatttaaataatct 1652
Query: 1813 cgctatctctagttttgcaaggcggaatttagaggataaactgatcgctaaaggattgcc 1872
||||||| ||| || |||||| ||||||| |||||| || |||||||||||| |
Sbjct: 1653 cgctatcactaattacataaggcgagatttagaagataaattgtgggctaaaggattgtc 1712
Query: 1873 cccaaaagacgctaataagatcatcaaagactttttgaacagcaacaaggaattgcttga 1932
|||| |||| ||||||||| |||||||||||||||||||||||||||| ||| || |||
Sbjct: 1713 cccacaagaagctaataagctcatcaaagactttttgaacagcaacaaagaaatggttgg 1772
Query: 1933 aaaagctttagacttcaataaagctgtagctgaagctaaaaatacaggcaattatgacgg 1992
||||| || | || |||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 1773 aaaagtttcaaacctcaataaagctgtagctgaagccaaaaacacaggcaattatgatgg 1832
Query: 1993 agtgaaaaaagctcaaaaagatcttgaaaaatctataaggaaacgagagcgtttagagca 2052
||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 1833 agtgaaaaaagctcagaaagatcttgaaaaatctctaaggaaacgagagcttttagagaa 1892
Query: 2053 agaaataacgaaaaaatttgagaacaagagcggcaacaaaaataaaatggaagcgaaagt 2112
|||| || |||||||||| |||| || | || ||||||||| | ||||||||| ||||
Sbjct: 1893 agaagtagcgaaaaaattggagagcagaaacgacaacaaaaacagaatggaagcaaaagc 1952
Query: 2113 tcaagctaacagccaaaaagatgggatttttaagcttatcaatgaagaggctcataagga 2172
|||||||||||||||||||||| ||||||| | | |||||| |||||||| ||||||
Sbjct: 1953 tcaagctaacagccaaaaagataagatttttgcgttgatcaataaagaggctagtaagga 2012
Query: 2173 agcaagaatcgccgcttacgctcagaatcttaaaggcatcaggagggaattgtttgataa 2232
||||||| ||||||| || || ||||||||||||||||||||| ||||||||||||||
Sbjct: 2013 agcaagagcggccgctttcgatccgaatcttaaaggcatcaggagcgaattgtttgataa 2072
Query: 2233 agttaaaaatctcaacaagaatttgaaagactttgataaatcttttgatgcgctcaaaag 2292
| || ||||| |||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 2073 acttgaaaatatcaacaagaatttgaaagactttggtaaatcttttgatgaactcaaaaa 2132
Query: 2293 tggcaaaaataaggatttcagcaaggcagaagaaacgctaaaagcccttgaaag-ctcgg 2351
|||||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||
Sbjct: 2133 tggcaaaaataatgatttcagcaaggcagaagaaacgctaaaagccctt-aaagacttgg 2191
Query: 2352 tgaaagatttgggtatcaatccagaatggatttcaaaagttgaaaaccttaatgcagctt 2411
|||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2192 tgaaagatttagccatcaatccagaatggatttcaaaaattgaaaaccttaatgcagctt 2251
Query: 2412 tgaatgaattcaaaaatggcaaaaataaggatttcagcaaggtaacacaagcaaaaagcg 2471
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2252 tgaatgatttcaaaaatggcaaaaataaggatttcagcaaggtaatacaagcaaaaagcg 2311
Query: 2472 accttgaaaattccattaaggatgtgctcatcaatcaagagataacggataaagttgaca 2531
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 2312 accttgaaaattccattaaggatgtgatcatcaatcaaaagataacggataaagttgaca 2371
Query: 2532 atctcaatcaggctgtattaagggctaaagcgataggcgattttagtggggtagagcaag 2591
|||||||||||||||||| | | ||||| | ||||||||| ||| |||||||||||
Sbjct: 2372 atctcaatcaggctgtatcagagactaaattaacaggcgatttcagtaaggtagagcaag 2431
Query: 2592 agctagccaaactcaaaa 2609
|||||| |||||||||
Sbjct: 2432 ccctagccgaactcaaaa 2449
Score = 957 bits (2470), Expect = e-279
Identities = 524/573 (91%)
Strand = Plus / Plus
Query: 1 atggctaacgaaaccatcaatcaaacaaaaaaaccagatcaaacaccaagccaaacggct 60
||| |||||||||| || ||||||||| || ||| ||||||||||||| |||||||| |
Sbjct: 1 atgactaacgaaactattgatcaaacaacaacaccggatcaaacaccaaaccaaacggat 60
Query: 61 tttaatccacaacaatttatcaataatcttcaagtggcttttattaaacttgatagtgct 120
||| ||| |||| |||||||||||||||||||| |||||||||||| |||||| |||
Sbjct: 61 tttgttccgcaacgatttatcaataatcttcaagcagcttttattaaagttgataacgct 120
Query: 121 gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggataacagg 180
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 gtcgcttcatttgatcctgatcaaaaaccaatcgttgataagaatgatagggataacagg 180
Query: 181 caagcttttaatgtaatctcgcaattaagggaagaatacgccaataaagcgatcaaaaat 240
||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 caagcttttgagaaaatctcgcaactaagggaagaatacgccaataaagcgatcaaaaat 240
Query: 241 cccaccaaaaagaatcagtatttttcagactttatcgataaaagcaatgatttgatcaac 300
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 241 cccaccaaaaagaatcagtatttttcagactttatcaataagagcaatgatttgatcaac 300
Query: 301 aaaaacgatctcattgatacagattcttccacaaagagctttgaaaaatttggggctcag 360
||| || ||||||||| | ||||||||| | | |||||| | |||||||||| ||||
Sbjct: 301 aaagacaatctcattgctgtagattcttctgtagatagctttaagaaatttggggatcag 360
Query: 361 cgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaacacc 420
|||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 cgttaccaaatttttacgagttgggtgtcccttcaaaaagatccgtctaaaatcaacacc 420
Query: 421 caaaaaatccgagattttatggaaaatatcatacaaccccctatctctgatgataaagaa 480
||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 caacaaatccaaaattttatggaaaatatcatacaaccccctatctctgatgataaggaa 480
Query: 481 aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaa 540
Query: 541 acccgatcggatgaaaaattcatgggcgttttt 573
| ||||||||||||||||||||||||||| |||
Sbjct: 541 atccgatcggatgaaaaattcatgggcgtgttt 573
Score = 588 bits (1516), Expect = e-168
Identities = 330/369 (89%)
Strand = Plus / Plus
Query: 3006 ctagttcgcaagcgaaattggacaattacgctactaacagccacacacgcattaatagca 3065
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3320 ctagtttgcaagcgaaattggacaattacgctactaatagccacacacgcattaatagca 3379
Query: 3066 atgtcaaaaatggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctg 3125
||||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 3380 atgtccaagatggaacaatcaatgaaaaagcgaccggcatgctgacgcaaaaaaaccctg 3439
Query: 3126 agtggctcaagcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgt 3185
||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 3440 agtggctcaagctcgtgaatgataagatagttgcacataatgtgggaagcactcatttgt 3499
Query: 3186 caggttatgataaaattggattcaaccaaaagaatatgaaaggttattctgattcgttca 3245
||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3500 cagagtatgataaaattggattcaaccaaaagaatatgaaagattattctgattcgttca 3559
Query: 3246 ggttttccaccaagttgagcaatgccgtaaaaaacattaagtctgactttaagcaacttt 3305
||||||||||||||||| || |||||||||| ||||||||||| |||| |||| |||
Sbjct: 3560 agttttccaccaagttgaacagtgccgtaaaagacattaagtctagctttgtgcaatttt 3619
Query: 3306 taaccgattgcatttctgcaggaacttacagcccgaagaaagc------ggaacatggag 3359
||||| || ||||| ||||| |||||||| || |||||| |||||||||||
Sbjct: 3620 taaccaatacattttctacaggatcttacagcttgatgaaagcagatgtggaacatggag 3679
Query: 3360 ttaaaaata 3368
| |||||||
Sbjct: 3680 tcaaaaata 3688
Score = 376 bits (970), Expect = e-104
Identities = 204/217 (94%)
Strand = Plus / Plus
Query: 817 tggggattggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctgatct 876
||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||
Sbjct: 627 tggggattggcttgatatttttttatcatttgtgtttaacaaaaaacaatcttccgatct 686
Query: 877 caaagaaacgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctctacccc 936
||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 687 caaagaaacgctcaatcaagagccaaggcctgattttgaacaaaatttagccactaccac 746
Query: 937 cacccacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgattt 996
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 747 caccgacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtaattt 806
Query: 997 ttctaaattcactcttggtgatatggaaatgttggat 1033
|| |||||||||||||||||||||||| |||||||||
Sbjct: 807 ttttaaattcactcttggtgatatggagatgttggat 843
Score = 254 bits (656), Expect = 1e-67
Identities = 148/176 (84%)
Strand = Plus / Plus
Query: 2782 ccctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggctttcaagggagca 2841
|||||||| || |||| |||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 3105 ccctttgagaataagtgctgcagttaatgatctcagtaaagtagggctttcaagggaaca 3164
Query: 2842 agaattgaatgagaaaattggcaatctcaatcaggcagtgtcagaagctaaagcaggttc 2901
|||||||| | | ||||||| |||||||||| || || |||||||||||| ||||
Sbjct: 3165 agaattgactcgtagaattggcgatctcaatcaagcggtatcagaagctaaaataggtca 3224
Query: 2902 ttttggcaacctagaacaaatgatggatggactcaaagattctacaaaaaagaatg 2957
||||| |||||||||||||| ||| |||| ||||||||||||||| ||||||||||
Sbjct: 3225 ttttgacaacctagaacaaaagatagatgaactcaaagattctacgaaaaagaatg 3280
Score = 60 bits (156), Expect = 2e-09
Identities = 32/33 (97%)
Strand = Plus / Plus
Query: 2733 ggcaatcagatagccctgaacccatttacgcta 2765
||||||||| |||||||||||||||||||||||
Sbjct: 3038 ggcaatcagctagccctgaacccatttacgcta 3070
Score = 53 bits (138), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2629 attggatcaaaaaaatgaaagtttcaat 2656
||||||||||||||||||||||||||||
Sbjct: 2457 attggatcaaaaaaatgaaagtttcaat 2484
Score = 49 bits (125), Expect = 7e-06
Identities = 26/28 (93%)
Strand = Plus / Plus
Query: 3373 tacaaaaagtggtttccagaaatcttaa 3400
||||||| |||||||||| |||||||||
Sbjct: 3690 tacaaaaggtggtttccaaaaatcttaa 3717
Score = 47 bits (121), Expect = 2e-05
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 785 aggcaagaagcacaaaacaatggagagcctg 815
|||||||||||| |||| |||| ||||||||
Sbjct: 592 aggcaagaagcagaaaaaaatgcagagcctg 622
Score = 23 bits (60), Expect = 3e+02
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 755 gatgaatctttg 766
||||||||||||
Sbjct: 574 gatgaatctttg 585
Score = 18 bits (45), Expect = 2e+04
Identities = 9/9 (100%)
Strand = Plus / Plus
Query: 2988 aagtgccta 2996
|||||||||
Sbjct: 3311 aagtgccta 3319
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2972 tttgaag 2978
|||||||
Sbjct: 3282 tttgaag 3288 |