>AB120417|27|G27|46091380|BAD13826.1|Helicobacter_pylori_F17|+|33084..36911|HP0547|-|cag
Length = 3828
Score = 2568 bits (6626), Expect = 0.0
Identities = 1424/1558 (91%)
Strand = Plus / Plus
Query: 1058 cacaataacgctctgtcttctatgctaatggggagtcatagcagcatagaacctgaaaaa 1117
||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 898 cacaataacgctctgtcttctgtgctaatggggggtcatagtaacatagaacctgaaaaa 957
Query: 1118 gtttcattgttgtatggggataatggtggtcctgaagctaggcatgattggaacgccacc 1177
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 gtttcattattgtatggggataatggtggtcctgaagctaggcatgattggaacgccacc 1017
Query: 1178 gttggttataaaaaccaacaaggcaacaatgtggccacactcatcaatgcgcatcttaaa 1237
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 gttggttataaagaccaacaaggcaacaatgtggccacactcatcaatgcgcatcttaat 1077
Query: 1238 aacggcagcgggttagtcatagcgggtaatggaaatgggattaacaaccctagcttctat 1297
||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 1078 aacggcagcgggttaatcatagtgggtaatgaggatgggattaaaaaccctagcttctat 1137
Query: 1298 ctctacaaaacagaccaactcacaggcttggaacaagcgttgagtcaagaagagatccaa 1357
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1138 ctctacaaaacagaccaactcacaggcttgaaacaagcgttgagtcaagaagagatccaa 1197
Query: 1358 aacaaagtggatttcatggaacttcttgcacaaaacaacgctagattagataacttgagc 1417
||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||
Sbjct: 1198 aacaaagtggatttcatggaatttcttgcaaaaaacaacgctaaattagacaacttgagc 1257
Query: 1418 gaggaagagaaagaaaagttccaaactgagattggaaatttccaaaaagaccctaaggct 1477
||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1258 gagaaagagaaagaaaaattccaaactgagattgaaaatttccaaaaagaccgtaaggct 1317
Query: 1478 tatttagactccctagggaatgatcgcattgcttttgtttctaaaaaagacc-aaaagca 1536
||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||| ||
Sbjct: 1318 tatttagacgctctagggaatgatcacattgcttttgtttctaaaaaagacccaaaa-ca 1376
Query: 1537 tttagctttggttactgagtttggtaatggggaattgagctatactctcaaagattatgg 1596
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 1377 tttagctttggttactgagtttggtaatgaggaagtgagctatactctcaaagattatgg 1436
Query: 1597 gaaaaaacaagatagagctttagatagggagacaaaaaccactcttcaaggtaacctaaa 1656
|||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 1437 gaaaaaacaagataaagctttagatggggagacaaaaaccactcttcaaggtagcctaaa 1496
Query: 1657 gcatgatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaagag 1716
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1497 atatgatggcgtgatgtttgttgattattccaatttcaaatacaccaacgcctccaagag 1556
Query: 1717 tcctgatgagggtataggcgctacgaatggcgtttcccatttggaagcaaattttagcaa 1776
|||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 tcctaataagggtttaggcgctacgaatggcgtttcccatttggaagcaaattttagcaa 1616
Query: 1777 ggtggctgtctttaatttgcctgatttaaatggtctcgctatctctagttttgcaaggcg 1836
||| |||||||||||||||||| |||||||| ||| |||||| ||| || | ||||||
Sbjct: 1617 ggtagctgtctttaatttgcctaatttaaataatcttgctatcactaattatataaggcg 1676
Query: 1837 gaatttagaggataaactgatcgctaaaggattgcccccaaaagacgctaataagatcat 1896
||||||| |||||| || |||||||||||| ||||| |||| ||||||||| ||||
Sbjct: 1677 agatttagaagataaattgtgggctaaaggattgtccccacaagaagctaataagctcat 1736
Query: 1897 caaagactttttgaacagcaacaaggaattgcttgaaaaagctttagacttcaataaagc 1956
|||||||||||||||||||||||| ||| || ||| ||||| |||| |||||||||||||
Sbjct: 1737 caaagactttttgaacagcaacaaagaaatggttggaaaagttttaaacttcaataaagc 1796
Query: 1957 tgtagctgaagctaaaaatacaggcaattatgacggagtgaaaaaagctcaaaaagatct 2016
|||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 1797 tgtagctgaagctaaaaacacaggcaattatgacgaagtgaaaaaagctcagaaagatct 1856
Query: 2017 tgaaaaatctataaggaaacgagagcgtttagagcaagaaataacgaaaaaatttgagaa 2076
|||||||||| ||||||||||||||| ||||||| ||||| || |||||||||| ||||
Sbjct: 1857 tgaaaaatctctaaggaaacgagagcatttagagaaagaagtagcgaaaaaattggagag 1916
Query: 2077 caagagcggcaacaaaaataaaatggaagcgaaagttcaagctaacagccaaaaagatgg 2136
|| | || ||||||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct: 1917 cagaaacgacaacaaaaatagaatggaagcaaaagctcaagctaacagccaaaaagataa 1976
Query: 2137 gatttttaagcttatcaatgaagaggctcataaggaagcaagaatcgccgcttacgctca 2196
||||||| | | |||||| ||||||| ||||||||||||| | ||||||| || ||
Sbjct: 1977 gatttttgcgttgatcaatacagaggctagtaaggaagcaagagtggccgctttcgatcc 2036
Query: 2197 gaatcttaaaggcatcaggagggaattgtttgataaagttaaaaatctcaacaagaattt 2256
|||||||||| ||| |||||| ||||||| ||||||| || ||||| |||||||||||||
Sbjct: 2037 gaatcttaaaagcaccaggagcgaattgtctgataaacttgaaaatatcaacaagaattt 2096
Query: 2257 gaaagactttgataaatcttttgatgcgctcaaaagtggcaaaaataaggatttcagcaa 2316
||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||
Sbjct: 2097 gaaagactttggcaaatcttttgatgaactcaaaaatggcaaaaataatgatttcagcaa 2156
Query: 2317 ggcagaagaaacgctaaaagcccttgaaag-ctcggtgaaagatttgggtatcaatccag 2375
||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||
Sbjct: 2157 ggcagaagaaacgctaaaagccctt-aaagactcggtgaaagatttaggcatcaatccag 2215
Query: 2376 aatggatttcaaaagttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaa 2435
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2216 aatggatttcaaaaattgaaaaccttaatgcagctttgaatgatttcaaaaatggcaaaa 2275
Query: 2436 ataaggatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatg 2495
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2276 ataaggatttcagtaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatg 2335
Query: 2496 tgctcatcaatcaagagataacggataaagttgacaatctcaatcaggctgtattaaggg 2555
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 2336 tgatcatcaatcaaaagataacggataaagttgacaatctcaatcaggctgtatcagaga 2395
Query: 2556 ctaaagcgataggcgattttagtggggtagagcaagagctagccaaactcaaaagctt 2613
||||| | ||||||||| ||| ||||||||||| |||||| |||||||||||||
Sbjct: 2396 ctaaattaacaggcgatttcagtaaggtagagcaagccctagccgaactcaaaagctt 2453
Score = 947 bits (2445), Expect = e-276
Identities = 521/573 (91%)
Strand = Plus / Plus
Query: 1 atggctaacgaaaccatcaatcaaacaaaaaaaccagatcaaacaccaagccaaacggct 60
||| |||||||||| || ||||||||| || || ||||||||||||| |||||||| |
Sbjct: 1 atgactaacgaaactattgatcaaacaacaacactggatcaaacaccaaaccaaacggat 60
Query: 61 tttaatccacaacaatttatcaataatcttcaagtggcttttattaaacttgatagtgct 120
||| ||| |||| ||||||||||||||||||||| |||||| ||||| |||||| |||
Sbjct: 61 tttgttccgcaacgatttatcaataatcttcaagtagcttttcttaaagttgataacgct 120
Query: 121 gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggataacagg 180
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 gtcgcttcatttgatcctgatcaaaaaccaatcgttgataagaatgatagggataacagg 180
Query: 181 caagcttttaatgtaatctcgcaattaagggaagaatacgccaataaagcgatcaaaaat 240
||||||||| | |||||||||| ||||| |||||||||| ||||||||||||||||||
Sbjct: 181 caagcttttgaaaaaatctcgcaactaaggaaagaatacgctaataaagcgatcaaaaat 240
Query: 241 cccaccaaaaagaatcagtatttttcagactttatcgataaaagcaatgatttgatcaac 300
||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 241 cccaccaaaaagaatcaatatttttcagactttatcaataagagcaatgatttgatcaac 300
Query: 301 aaaaacgatctcattgatacagattcttccacaaagagctttgaaaaatttggggctcag 360
||| || ||||||||| | |||||||||| | |||||||| |||||||||| ||||
Sbjct: 301 aaagacaatctcattgctgtagattcttccgtagagagctttcggaaatttggggatcag 360
Query: 361 cgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaacacc 420
|||||||||||||||| || ||||||||||| |||||||||||||||| |||||||||||
Sbjct: 361 cgttaccaaatttttacgagttgggtgtcccttcaaaaagatccgtctgaaatcaacacc 420
Query: 421 caaaaaatccgagattttatggaaaatatcatacaaccccctatctctgatgataaagaa 480
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 caacaaatccgaaattttatggaaaatatcatacaaccccctatctctgatgataaggaa 480
Query: 481 aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaa 540
Query: 541 acccgatcggatgaaaaattcatgggcgttttt 573
| ||||||||||||||||||||||||||| |||
Sbjct: 541 atccgatcggatgaaaaattcatgggcgtgttt 573
Score = 571 bits (1474), Expect = e-163
Identities = 321/359 (89%)
Strand = Plus / Plus
Query: 3013 gcaagcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaa 3072
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3438 gcaagcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcca 3497
Query: 3073 aaatggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggct 3132
|| |||| ||||||||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct: 3498 aagtggagcaatcaatgaaaaggcgaccggcatgctgacgcaaaaaaaccctgagtggct 3557
Query: 3133 caagcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggtta 3192
|||||| |||||||||||||||||||| ||||||||||||||| ||| |||||||| ||
Sbjct: 3558 caagctcgtgaatgataagatagttgcacataatgtgggaagcactcatttgtcagagta 3617
Query: 3193 tgataaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttc 3252
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 3618 tgataaaattggattcaaccaaaagaatatgaaagattattctgattcgttcaagttttc 3677
Query: 3253 caccaagttgagcaatgccgtaaaaaacattaagtctgactttaagcaacttttaaccga 3312
||||||||||| ||||||||||||| ||||||||||| |||| |||| |||||||| |
Sbjct: 3678 caccaagttgaacaatgccgtaaaagacattaagtctagctttgtgcaatttttaaccaa 3737
Query: 3313 ttgcatttctgcaggaacttacagcccgaagaaagc------ggaacatggagttaaaa 3365
| ||||| ||||| |||||||| || |||||| |||||||||||| ||||
Sbjct: 3738 tacattttctacaggatcttacagcttgatgaaagcaaatgtggaacatggagtcaaaa 3796
Score = 368 bits (950), Expect = e-102
Identities = 201/217 (93%)
Strand = Plus / Plus
Query: 817 tggggattggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctgatct 876
||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||
Sbjct: 627 tggggattggcttgatatttttttatcatttgtgtttaacaaaaaacaatcttccgatct 686
Query: 877 caaagaaacgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctctacccc 936
||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 687 caaagaaacgctcaatcaagagccaaggcctgattttgaacaaaatttagccactaccac 746
Query: 937 cacccacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgattt 996
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 747 caccgacatacaaggcttaccgcctgaagctagagatttgcttgatgaaaggggtaattt 806
Query: 997 ttctaaattcactcttggtgatatggaaatgttggat 1033
|| ||||||||||||||||||| | || |||||||||
Sbjct: 807 ttttaaattcactcttggtgatgtagagatgttggat 843
Score = 260 bits (671), Expect = 1e-69
Identities = 149/176 (85%)
Strand = Plus / Plus
Query: 2782 ccctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggctttcaagggagca 2841
|||||||| ||| | || |||| |||| |||||||| ||||||||||||||| | ||
Sbjct: 3216 ccctttgagaagaagtactggagttaatgacctcagtaaagtagggctttcaaggaaaca 3275
Query: 2842 agaattgaatgagaaaattggcaatctcaatcaggcagtgtcagaagctaaagcaggttc 2901
|||||||| | | ||||||| ||||||||||||| || |||||||||||| ||||||
Sbjct: 3276 agaattgactcgtagaattggcgatctcaatcaggcggtatcagaagctaaaacaggtta 3335
Query: 2902 ttttggcaacctagaacaaatgatggatggactcaaagattctacaaaaaagaatg 2957
||||| |||||||||||||| ||| |||| ||||||||||||||| ||||||||||
Sbjct: 3336 ttttgacaacctagaacaaaagatagatgaactcaaagattctacgaaaaagaatg 3391
Score = 62 bits (159), Expect = 8e-10
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2731 agggcaatcagatagccctgaacccatttacgcta 2765
||||| ||||| |||||||||||||||||||||||
Sbjct: 3147 agggcgatcagctagccctgaacccatttacgcta 3181
Score = 49 bits (125), Expect = 7e-06
Identities = 26/28 (93%)
Strand = Plus / Plus
Query: 3373 tacaaaaagtggtttccagaaatcttaa 3400
||||||| |||||||||| |||||||||
Sbjct: 3801 tacaaaaggtggtttccaaaaatcttaa 3828
Score = 47 bits (121), Expect = 2e-05
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 785 aggcaagaagcacaaaacaatggagagcctg 815
|||||||||||| |||| |||| ||||||||
Sbjct: 592 aggcaagaagcagaaaaaaatgcagagcctg 622
Score = 23 bits (60), Expect = 3e+02
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 755 gatgaatctttg 766
||||||||||||
Sbjct: 574 gatgaatctttg 585
Score = 21 bits (54), Expect = 1e+03
Identities = 11/11 (100%)
Strand = Plus / Plus
Query: 1034 tacaagttcaa 1044
|||||||||||
Sbjct: 874 tacaagttcaa 884
Score = 18 bits (45), Expect = 2e+04
Identities = 9/9 (100%)
Strand = Plus / Plus
Query: 2988 aagtgccta 2996
|||||||||
Sbjct: 3422 aagtgccta 3430
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2972 tttgaag 2978
|||||||
Sbjct: 3393 tttgaag 3399 |