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PAthogenisity Island DataBase (PAI DB)

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Homologs of virB10-1 gene of NC_011498_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) virB10-1
( YP_002301098.1 )

VirB10 type IV secretion protein

NC_011498
(Helicobacter pylori P12)

0.0

100

2) HPPN135_05155
( YP_005790221.1 )

VirB10 type IV secretion protein

NC_017379
(Helicobacter pylori Puno135)

0.0

3) HPPC_07715
( YP_003927797.1 )

VirB10 type IV secretion protein

NC_014555
(Helicobacter pylori PeCan4)

0.0

4) HPSA_07600
( YP_005772074.1 )

VirB10 type IV secretion protein

NC_017361
(Helicobacter pylori SouthAfrica7)

3e-179

5) HPAKL117_06680
( YP_007017856.1 )

competence protein

NC_019560
(Helicobacter pylori Aklavik117)

3e-140

6) comB10-2
( YP_005777002.1 )

ComB3 protein

NC_017367
(Helicobacter pylori F57)

3e-140

7) comB10-2
( YP_002266586.1 )

competence protein

NC_011333
(Helicobacter pylori G27)

7e-140

8) HPCU_01225
( YP_005766337.1 )

competence protein

NC_017358
(Helicobacter pylori Cuz20)

2e-139

9) HPSNT_00435
( YP_005786253.1 )

competence protein

NC_017376
(Helicobacter pylori Santal49)

3e-139

10) HPSA20_1129
( YP_008472075.1 )

bacterial conjugation TrbI-like family protein

NC_022130
(Helicobacter pylori SouthAfrica20)

5e-139

11) HPSA_04700
( YP_005771529.1 )

competence protein

NC_017361
(Helicobacter pylori SouthAfrica7)

6e-139

12) HPGAM_05115
( YP_005780711.1 )

competence protein

NC_017371
(Helicobacter pylori Gambia94/24)

1e-134

13) HPSH112_07070
( YP_006228090.1 )

ComB3 protein

NC_017741
(Helicobacter pylori Shi112)

9e-133

14) HPSH169_01090
( YP_006225416.1 )

ComB3 protein

NC_017740
(Helicobacter pylori Shi169)

2e-132

15) HPSH_04590
( YP_001910383.1 )

ComB3 protein

NC_010698
(Helicobacter pylori Shi470)

3e-132

16) HPSH417_05560
( YP_006224734.1 )

ComB3 protein

NC_017739
(Helicobacter pylori Shi417)

3e-132

17) comB10-2
( YP_006331093.1 )

competence protein

NC_017919
(Helicobacter pylori XZ274)

5e-131

18) comB10-2
( YP_006338251.1 )

competence protein

NC_017926
(Helicobacter pylori XZ274)

5e-131

19) K751_06530
( YP_007984264.1 )

membrane protein

NC_021218
(Helicobacter pylori UM066)

7e-124

20) K751_08205
( YP_007984576.1 )

membrane protein

NC_021218
(Helicobacter pylori UM066)

1e-72

21) HPSA_00195
( YP_005770676.1 )

ComB10 competence protein

NC_017361
(Helicobacter pylori SouthAfrica7)

8e-67

22) HCW_00170
( YP_006221963.1 )

ComB3 protein

NC_017737
(Helicobacter cetorum MIT 00-7128)

3e-65

23) HPOK113_0520
( YP_007536634.1 )

comB10 competence protein

NC_020508
(Helicobacter pylori OK113)

4e-64

24) trbI
( YP_005784669.1 )

conjugal transfer protein TrbI

NC_017375
(Helicobacter pylori 83)

5e-64

25) HPIN_03855
( YP_005782084.1 )

type IV secretion system protein VirB10

NC_017372
(Helicobacter pylori India7)

8e-60

• Sequence Alignments

1) virB10-1 in NC_011498


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  682 bits (2579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 421/421 (100%), Positives = 421/421 (100%), Gaps = 0/421 (0%)

Query  1    MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVKIYVKGKFPISDYLYKQADEKK  60
            MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVKIYVKGKFPISDYLYKQADEKK
Sbjct  1    MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVKIYVKGKFPISDYLYKQADEKK  60

Query  61   ILPQNNVVKQEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTK  120
            ILPQNNVVKQEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTK
Sbjct  61   ILPQNNVVKQEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTK  120

Query  121  PTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYG  180
            PTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYG
Sbjct  121  PTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYG  180

Query  181  SSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGR  240
            SSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGR
Sbjct  181  SSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGR  240

Query  241  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  300
            AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL
Sbjct  241  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  300

Query  301  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGIS  360
            HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGIS
Sbjct  301  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGIS  360

Query  361  LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  420
            LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT
Sbjct  361  LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  420

Query  421  K  421
            K
Sbjct  421  K  421

2) HPPN135_05155 in NC_017379


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  635 bits (2399),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 400/421 (96%), Positives = 411/421 (98%), Gaps = 0/421 (0%)

Query  1    MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVRNYVKGKFPISDYLYKKADKKK  60
            MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAV+ YVKGKFPISDYLYK+AD KK
Sbjct  1    MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVKIYVKGKFPISDYLYKQADEKK  60

Query  61   IPPQNNVVkqqikeeeikkSCKGQITDNKGNLIDDDCNIIATQKQVNNLPNLPKDILKTK  120
            I PQNNVVKQ+IKEE IKKSCKGQITD+KGNLIDDDCNIIATQKQVNNLPNLPKDILKTK
Sbjct  61   ILPQNNVVKQEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTK  120

Query  121  PTVASNPFNYNTANEEEKIRLVILASRISSQKETQPPTFVKNSVSNTKSKEKQELEKEYG  180
            PTV+SNP NYNTANEEEK RLVILASRISSQKETQPPT +KNSVS+TKSKEKQ LEKEYG
Sbjct  121  PTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYG  180

Query  181  SIGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGR  240
            S GFKNFKRKN+ASSENKLLR ITADRMIPAILITPISSEIGGSK+VAQVESDIYATMGR
Sbjct  181  SSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGR  240

Query  241  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  300
            AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL
Sbjct  241  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  300

Query  301  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGIS  360
            HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNK+GGFNQNYFGDYMMMQMTRQTGIS
Sbjct  301  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGIS  360

Query  361  LNNIIAQIMRDQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  420
            LNNIIAQIMR+QIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT
Sbjct  361  LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  420

Query  421  K  421
            K
Sbjct  421  K  421

3) HPPC_07715 in NC_014555


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  633 bits (2393),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/421 (95%), Positives = 411/421 (98%), Gaps = 0/421 (0%)

Query  1    MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVRNYVKSKFPISDYLYKKADKKK  60
            MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAV+ YVK+KFPISDYLYK+AD KK
Sbjct  1    MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVKIYVKGKFPISDYLYKQADEKK  60

Query  61   IPPQNNVikqeikeeeikkSCKGQITDNKGNLIDDDCNIIATQKQVNKLPNLPKDILKTK  120
            I PQNNV+KQEIKEE IKKSCKGQITD+KGNLIDDDCNIIATQKQVN+LPNLPKDILKTK
Sbjct  61   ILPQNNVVKQEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTK  120

Query  121  PTVVSNPFNYNTANEDEKSRLVILASRISSQKETQPPISIKNSVSHIKSKEKRELEKEYG  180
            PTV SNP NYNTANE+EK+RLVILASRISSQKETQPP SIKNSVSH KSKEK+ LEKEYG
Sbjct  121  PTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYG  180

Query  181  SSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGR  240
            SSGFKNFKRKN+ASSENKLLR ITADRMIPAILITPISSEIGGSK+VAQVESDIYATMGR
Sbjct  181  SSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGR  240

Query  241  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  300
            AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL
Sbjct  241  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  300

Query  301  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGIS  360
            HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNK+GGFNQNYFGDYMMMQMTRQTGIS
Sbjct  301  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGIS  360

Query  361  LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  420
            LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT
Sbjct  361  LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  420

Query  421  K  421
            K
Sbjct  421  K  421

4) HPSA_07600 in NC_017361


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  621 bits (2346),  Expect = 3e-179, Method: Compositional matrix adjust.
 Identities = 390/421 (93%), Positives = 402/421 (96%), Gaps = 2/421 (0%)

Query  2    MGFFRVIRNAPIVSIFIVLMLIFCAWFFLYDDSSPKLVRNYVKGKFPISDYLYKKADKKE  61
            MGFFRVIRNAPIVS+FIVLMLIFCAWFFLYDDSSPK V+ YVKGKFPISDYLYK+AD K 
Sbjct  1    MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVKIYVKGKFPISDYLYKQADEKK  60

Query  62   IPPQNNVVKQE-KEE-IKKSCKGQITDNKGNLIDDDCNIIATQKQVNNLPNLPKDFNKTL  119
            I PQNNVVKQE KEE IKKSCKGQITD+KGNLIDDDCNIIATQKQVNNLPNLPKD+ KT 
Sbjct  61   ILPQNNVVKQEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTK  120

Query  120  IKPQSPSFNYNTANEEEKFRLVILASRISTQKETQPPISIKNSVSNTKSKEKRELEKEYG  179
                S + NYNTANEEEK RLVILASRIS+QKETQPP SIKNSVS+TKSKEK+ LEKEYG
Sbjct  121  PTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYG  180

Query  180  SSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGR  239
            SSGFKNFKRKN+ASSENKLLR ITADRMIPAILITPISSEIGGSK+VAQVESDIYATMGR
Sbjct  181  SSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGR  240

Query  240  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  299
            AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL
Sbjct  241  AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTL  300

Query  300  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGIS  359
            HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNK+GGFNQNYFGDYMMMQMTRQTGIS
Sbjct  301  HNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGIS  360

Query  360  LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  419
            LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT
Sbjct  361  LNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDT  420

Query  420  K  420
            K
Sbjct  421  K  421

5) HPAKL117_06680 in NC_019560


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  491 bits (1853),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 320/397 (81%), Positives = 349/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNVL-----VQKLPNLPKDFNKTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N++     V++LPNLPKD+ KT     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKETQPPISIKNSVSNTKSKEKQELEKEYGSNGFKNFKRKNVASSENKLLRTIT  194
            ASRISSQKETQPP SIKNSVS+TKSKEKQ LEKEYGS+GFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

6) comB10-2 in NC_017367


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  491 bits (1853),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 320/397 (81%), Positives = 349/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNVL-----VQKLPNLPKDFNKTLIKPQSPSFNYNTANEEEKIRLVIL  134
            I  ++ +L  DD N++     V++LPNLPKD+ KT     S + NYNTANEEEK RLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKETQPPTSIKNSVSNTKSKEKQELEKEYGSSGFKNFKRKNVASSENKLLRTIT  194
            ASRISSQKETQPPTSIKNSVS+TKSKEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTNIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNT+IWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

7) comB10-2 in NC_011333


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  490 bits (1848),  Expect = 7e-140, Method: Compositional matrix adjust.
 Identities = 318/397 (81%), Positives = 349/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNLPKDFNKTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N +     V++LPNLPKD+ KT     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKETQPPTSIKNSVSNTKSKEKQELEKEYGSSGFKNFKRKNVASSENKLLRTIT  194
            ASRISSQKETQPPTSIKNSVS+TKSKEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIIAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK++AQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMRDQIRIKPIITIREG  374
            LTSGLTEAMKNK+GGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMR+QIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEILAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNE+LAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

8) HPCU_01225 in NC_017358


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  489 bits (1842),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 317/397 (80%), Positives = 348/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNVL-----VQKLPNLPKDFNRTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N++     V++LPNLPKD+ +T     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKETQPPTSIKNSVSNTKSKEKQELEKEYGSSGFKNFKRKNVASSENKLLRTIT  194
            ASRISSQKETQPPTSIKNSVS+TKSKEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIVWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEI WNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDTIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLN+ IAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPISKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPI+KNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

9) HPSNT_00435 in NC_017376


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  488 bits (1839),  Expect = 3e-139, Method: Compositional matrix adjust.
 Identities = 320/397 (81%), Positives = 348/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNLPKDFNKTLIKPQSPFFNYSTANEEEKTRLVIL  134
            I  ++ +L  DD N +     V++LPNLPKD+ KT     S   NY+TANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKETQPPTSIKNSVSNTKSKEKQELEKEYGSSGFKNFKRKNVASSENKLLRTIT  194
            ASRISSQKETQPPTSIKNSVS+TKSKEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNK+GGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

10) HPSA20_1129 in NC_022130


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  487 bits (1837),  Expect = 5e-139, Method: Compositional matrix adjust.
 Identities = 318/397 (81%), Positives = 348/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNFPKDFNKTLIKPQSPSFNYNTANEEEKSRLMIL  134
            I  ++ +L  DD N +     V++LPN+PKD+ KT     S + NYNTANEEEK+RL+IL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKEMQPPTSIKNSVSHTKSKEKRELEKEYGSSGFKNFKRKNIASSENKLLRTIT  194
            ASRISSQKE QPPTSIKNSVSHTKSKEK+ LEKEYGSSGFKNFKRKNIASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNK+GGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

11) HPSA_04700 in NC_017361


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  487 bits (1836),  Expect = 6e-139, Method: Compositional matrix adjust.
 Identities = 317/397 (80%), Positives = 348/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNFPKDFNKTLIKPQSPSFNYNTANEEEKSRLMIL  134
            I  ++ +L  DD N +     V++LPN+PKD+ KT     S + NYNTANEEEK+RL+IL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKEMQPPTSIKNSVSHTKSKEKRELEKEYGSSGFKNFKRKNVASSENKLLRTIT  194
            ASRISSQKE QPPTSIKNSVSHTKSKEK+ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNK+GGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

12) HPGAM_05115 in NC_017371


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  473 bits (1781),  Expect = 1e-134, Method: Compositional matrix adjust.
 Identities = 308/391 (79%), Positives = 339/391 (87%), Gaps = 11/391 (2%)

Query  32   QEIKEKAVNV-SQGKFPTSSYLFQAYEGIK--NKIDTISQ-VKPNDETKSVNENIEKTQK  87
            ++   KAV++  +GKFP S YL++  +  K   + + + Q +K +   KS + +I  ++ 
Sbjct  31   DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQITDSKG  90

Query  88   DL--DDFNAL-----VQKLPNLPKGFNKTLIKPQSPFFNYSTANKDEKTRLVILASRISG  140
            +L  DD N +     V++LPNLPK++ KT     S   NY+TAN +EKTRLVILASRIS+
Sbjct  91   NLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVILASRISS  150

Query  141  QKETQPPISIKDSVSHIKSKEKRELEKEYGSSGFKTFKRKNVASSENKLLRTITADRMIP  200
            QKETQPP SIK+SVSH KSKEK+ LEKEYGSSGFK FKRKN+ASSENKLLR ITADRMIP
Sbjct  151  QKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIP  210

Query  201  AILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWN  260
            AILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWN
Sbjct  211  AILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWN  270

Query  261  RIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT  320
            RIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT
Sbjct  271  RIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT  330

Query  321  EAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFIS  380
            EAMKNK+GGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFIS
Sbjct  331  EAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFIS  390

Query  381  PNTDIWFPIPKNNEVLAEFFNEEKEQNNDTK  411
            PNTDIWFPIPKNNEVLA FFNEEKEQNNDTK
Sbjct  391  PNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

13) HPSH112_07070 in NC_017741


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  466 bits (1757),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 318/397 (81%), Positives = 348/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N +     V++LPNLPKD+ KT     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRVSSQKETQPPTSIKNSVSNTkykekqelekeyGSSGFKNFKRKNVASSENKLLRTIT  194
            ASR+SSQKETQPPTSIKNSVS+TK KEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGAD+KGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLN+IIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

14) HPSH169_01090 in NC_017740


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  465 bits (1752),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 316/397 (80%), Positives = 348/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N +     V++LPNLPKD+ KT     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRVSSQKETQPPTSIKNSVSNTkykekqelekeyGSSGFKNFKRKNVASSENKLLRTIT  194
            ASR+SSQKETQPPTSIKNSVS+TK KEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDAKGAD+KGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIKIKPIITIREG  374
            LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLN+IIAQIMREQI+IKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLSKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVL+KFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

15) HPSH_04590 in NC_010698


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  465 bits (1752),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 317/397 (80%), Positives = 347/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N +     V++LPNLPKD+ KT     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRVSSQKETQPPTSIKNSVSNTkykekqelekeyGSSGFKNFKRKNVASSENKLLRTIT  194
            ASR+SSQKETQPPTSIKNSVS+TK KEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LGIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            L IAWNRIITPQGVNIILSDAKGAD+KGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLN+IIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

16) HPSH417_05560 in NC_017739


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  464 bits (1750),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 316/397 (80%), Positives = 347/397 (88%), Gaps = 13/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK---NKIDTINEVKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   ++    +E+K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N +     V++LPNLPKD+ KT     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRVSSQKETQPPTSIKNSVSNTkykekqelekeyGSSGFKNFKRKNVASSENKLLRTIT  194
            ASR+SSQKETQPPTSIKNSVS+TK KEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPVILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  254
            ADRMIP ILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDANGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  314
            LEIAWNRIITPQGVNIILSDA+GAD+KGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIRIKPIITIREG  374
            LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLN+IIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  375  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  411
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

17) comB10-2 in NC_017919


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  460 bits (1734),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 294/341 (87%), Positives = 311/341 (92%), Gaps = 7/341 (2%)

Query  16   NEVKPNDETKSVNENIKKTQKDL--DDFNVL-----VQKLPNLPKDFNKTLIKPQSPSFN  68
            +E+K +   KS + +I  ++ +L  DD N++     V++LPNLPKD+ KT     S + N
Sbjct  70   QEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSN  129

Query  69   YNTANEEEKTRLVILVSRIRSQKETQPPISIKNSVSNTKSKEKQGLEKEYGSSGFKNFKR  128
            YNTANEEEKTRLVIL SRI SQKETQPP SIKNSVS+TKSKEKQGLEKEYGSSGFKNFKR
Sbjct  130  YNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKR  189

Query  129  KNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSR  188
            KN+ASSENKLLR ITADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSR
Sbjct  190  KNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSR  249

Query  189  AIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYG  248
            AIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYG
Sbjct  250  AIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYG  309

Query  249  IPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQTTRQTGISLNNIIAQIM  308
            IPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQ TRQTGISLNNIIAQIM
Sbjct  310  IPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIM  369

Query  309  REQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF  349
            REQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF
Sbjct  370  REQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF  410

18) comB10-2 in NC_017926


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  460 bits (1734),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 294/341 (87%), Positives = 311/341 (92%), Gaps = 7/341 (2%)

Query  16   NEVKPNDETKSVNENIKKTQKDL--DDFNVL-----VQKLPNLPKDFNKTLIKPQSPSFN  68
            +E+K +   KS + +I  ++ +L  DD N++     V++LPNLPKD+ KT     S + N
Sbjct  70   QEIKEERIKKSCKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSN  129

Query  69   YNTANEEEKTRLVILVSRIRSQKETQPPISIKNSVSNTKSKEKQGLEKEYGSSGFKNFKR  128
            YNTANEEEKTRLVIL SRI SQKETQPP SIKNSVS+TKSKEKQGLEKEYGSSGFKNFKR
Sbjct  130  YNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKR  189

Query  129  KNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSR  188
            KN+ASSENKLLR ITADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSR
Sbjct  190  KNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSR  249

Query  189  AIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYG  248
            AIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYG
Sbjct  250  AIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYG  309

Query  249  IPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQTTRQTGISLNNIIAQIM  308
            IPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQ TRQTGISLNNIIAQIM
Sbjct  310  IPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIM  369

Query  309  REQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF  349
            REQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF
Sbjct  370  REQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF  410

19) K751_06530 in NC_021218


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  437 bits (1645),  Expect = 7e-124, Method: Compositional matrix adjust.
 Identities = 316/397 (80%), Positives = 348/397 (88%), Gaps = 14/397 (3%)

Query  26   FFLFYEQEIKEKAVNV-SQGKFPTSSYLFQAYEGIK--NKIDTINK-VKPNDETKSVNEN  81
            FFL+  ++   KAV++  +GKFP S YL++  +  K   + + +++ +K +   KS + +
Sbjct  27   FFLY--DDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKSCKGQ  84

Query  82   IEKTQKDL--DDFNAL-----VQKLPNLPKDFNKTLIKPQSPSFNYNTANEEEKTRLVIL  134
            I  ++ +L  DD N +     V++LPNLPKD+ KT     S + NYNTANEEEKTRLVIL
Sbjct  85   ITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVIL  144

Query  135  ASRISSQKETQPPTSIKNSVSNTKSKEKQELEKEYGSSGFKNFKRKNVASSENKLLRTIT  194
            ASRISSQKETQPPTSIKNSVS+TKSKEKQ LEKEYGSSGFKNFKRKN+ASSENKLLR IT
Sbjct  145  ASRISSQKETQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMIT  204

Query  195  ADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRVIGYYNSNNKIGEYR  254
            ADRMIPAILITPISSEIGGSK+VAQVESDIYATMGRAVLIPKGSR IGYYNSNNKIGEYR
Sbjct  205  ADRMIPAILITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYR  264

Query  255  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYgislslstlsngllig  314
            LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGI+LSLSTLSNGLLIG
Sbjct  265  LEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIG  324

Query  315  ltsgltEAMKNKRGGFNQNYFGDY-MMQITRQTGISLNNIIAQIMREQIRIKPIITIREG  373
            LTSGLTEAMKNK+GGFNQNYFGDY MMQ+TRQTGISLNNIIAQIMREQIRIKPIITIREG
Sbjct  325  LTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREG  384

Query  374  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  410
            SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
Sbjct  385  SHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK  421

20) K751_08205 in NC_021218


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  267 bits (997),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 241/321 (76%), Gaps = 24/321 (7%)

Query  82   VSTNPIITDYSHLNSNLNKQNDTITHLQQVLQSPPKMKPKLKHTKEQLEFLDTRLKPLEP  141
            ++T+  + + ++L  ++ K + T+T       +P++ +    + K +L +L +R+ +   
Sbjct  100  IATQKQVNNLPNLPKDILKTKPTVT------SNPSNYNTANEEEKTRLVILASRISSQKE  153

Query  142  TKPATK---------------LETEYGVDSFSNLKYKDIGTNEHKLLRTITADRMIPAFL  186
            T+P+T                LE EYG  +F N+K K+I+++E+KLLR ITADRMIPA+L
Sbjct  154  TQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIPAIL  213

Query  187  ITPISSQIAG-KVTAQVESDIFASMGRAVLIPKGSKVIGYYDNNNQIGQYRLNIAWTRII  245
            ITPISS+I+G KV AQVESDI+A+MGRAVLIPKGS+ IGYY++NN+IG+YRL+IAW RII
Sbjct  214  ITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRII  273

Query  246  TPQGINIMLTNARGADVKGYNGLVGKYISRNFQRYGIPLLTNTLSNGLLIGVTSALANQ-  304
            TPQG+NI+L++A+GADVKGYNG++G   ++  +RYGIPL  +TLSNGLLIG+TS+L++  
Sbjct  274  TPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAM  333

Query  305  QNKKGD-GNPFFGDYLLMQFTRNTGMGINQVINQMLRQYGAQNPIIIIREGSRVFITPNL  363
            +NKKG+  + +FGDY++MQ TR+TG+++N++I Q++R+    +PII IREGS++FI+PN 
Sbjct  334  KNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNT  393

Query  364  DIFIPKPKDGEVLAEFFKEKK  384
            DI +P PK+ EVLA FF+E K
Sbjct  394  DIWFPIPKNNEVLAKFFNEEK  414

21) HPSA_00195 in NC_017361


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  247 bits (923),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 161/303 (54%), Positives = 238/303 (79%), Gaps = 15/303 (4%)

Query  91   NLPKEETKELANPPIEPKANTTPPKKDFSLKQLDLLASRITPFK--QSPKNYEENLIFPV  148
            NLPK+  K  ++P + ++++     ++    +L +LASRI++ K  Q+P +  +++    
Sbjct  111  NLPKDILK--TKPTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSIKNSVSHTK  168

Query  149  DNPK-------GIDGFTNLKEKDIATNENKLLRTITADKMIPAFLITPISSQIAG-KVIA  200
             + K       G  GF N+K K+IA++ENKLLR ITAD+MIPA+LITPISS+I+G KV+A
Sbjct  169  SKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVA  228

Query  201  QVESDIFAHMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNAKGA  260
            QVESDI+A MG+AVLIPKGS+ IGYY++NNK+GEYRL+I W+RIITP+G+NI+L++AKGA
Sbjct  229  QVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGA  288

Query  261  DIKGYNGLVGELIERNFQRYGVPlllstltnglligitsALNN--RGNKEE-ATNFFGDY  317
            D+KGYNG++G L ++  +RYG+PL LSTL+NGLLIG+TS+L +  + +K     N+FGDY
Sbjct  289  DVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDY  348

Query  318  LLMQLMRQSGMGINQVVNQILRDKSKIAPIVIIREGSRVFISPNTDIFFPIPKDNEVIAE  377
            ++MQ+ RQ+G+++N+++ QI+R++ +I PI+ IREGS++FISPNTDI FPIPK+NEV+A 
Sbjct  349  MMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAK  408

Query  378  FLE  380
            F++
Sbjct  409  FFN  411

22) HCW_00170 in NC_017737


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  242 bits (902),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 164/312 (53%), Positives = 238/312 (77%), Gaps = 19/312 (6%)

Query  85   LNSQKISPPKQEIPKDF--TKPPTKTN---YSK-KDLSLEQLDLLATRITPFEES--PKN  136
            + +QK      ++PKD+  TKP   +N   Y+  ++    +L +LA+RI++  E+  P +
Sbjct  100  IATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTS  159

Query  137  YEENLIFPTDSSK-------GIDSFTNLKEKDITTNENRLLRTITADKMIPAFLITPISS  189
              +++       K       G  +F N+K K+I+++EN+LLR ITAD+MIPA+LITPISS
Sbjct  160  IKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISS  219

Query  190  QIAG-KVIAQVESDIFANMGKAVLIPKGSKVIGYYNNNNKMGEYRLDIVWTRIITPHGIN  248
            +I+G KV+AQVESDI+A MG+AVLIPKGS+ IGYYN+NNK+GEYRL+I W RIITP+G+N
Sbjct  220  EIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVN  279

Query  249  IMLTNAKGADIKGYNGLVGELIERNFQRYGMPlllstltnglligltsALNN--KGNKED  306
            I+L++AKGAD+KGYNG++G L ++  +RYG+PL LSTL+NGLLIGLTS+L +  K +K +
Sbjct  280  IILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGG  339

Query  307  -TTNFFGDYLLMQMIRQSGTGINQVINQILRDKSKIAPIVVIREGSRVFISPNTDIFFPM  365
               N+FGDY++MQM RQ+G ++N++I QI+R++ +I PI+ IREGS++FISPNTDI FP+
Sbjct  340  FNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPI  399

Query  366  PKSNEVIAEFLE  377
            PK+NEV+A F++
Sbjct  400  PKNNEVLAKFFN  411

23) HPOK113_0520 in NC_020508


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  238 bits (888),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 241/321 (76%), Gaps = 24/321 (7%)

Query  63   VSTNPIITDYSHLNSNLNKQNDTITHLQQVLQSPPKMKPKLKHTKEQLEFLNTRLKPLES  122
            ++T+  + + ++L  ++ K + T+T       +P++ +    + K +L +L +R+ +   
Sbjct  100  IATQKQVNNLPNLPKDILKTKPTVT------SNPSNYNTANEEEKTRLVILASRISSQKE  153

Query  123  TKPATKP---------------ETEYGVDSFSNLRYKDIGTNEHKLLRTITADRMIPAFL  167
            T+P+T                 E EYG  +F N++ K+I+++E+KLLR ITADRMIPA+L
Sbjct  154  TQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIPAIL  213

Query  168  ITPISSQIAG-KVTAQVESDIFASMGRAVLIPKGSKVigyynnnnqigqyRLNIAWTRII  226
            ITPISS+I+G KV AQVESDI+A+MGRAVLIPKGS+ IGYYN+NN+IG+YRL+IAW RII
Sbjct  214  ITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRII  273

Query  227  TPQGINIMLTNARGADVKGYNGLVGKYISRNFQRYGIPLLTNTLSNGLLIGITSALANQ-  285
            TPQG+NI+L++A+GADVKGYNG++G   ++  +RYGIPL  +TLSNGLLIG+TS+L++  
Sbjct  274  TPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAM  333

Query  286  QNKKGD-GNPFFGDYLLMQLTRNTGMGINQVINQMLRQYGAQNPIIIIREGSRVFISPNL  344
            +NKKG+  + +FGDY++MQ+TR+TG+++N++I Q++R+    +PII IREGS++FISPN 
Sbjct  334  KNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNT  393

Query  345  DIFIPKPKDGEVLAEFFKEKK  365
            DI +P PK+ EVLA FF+E K
Sbjct  394  DIWFPIPKNNEVLAKFFNEEK  414

24) trbI in NC_017375


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  238 bits (888),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 164/321 (52%), Positives = 241/321 (76%), Gaps = 24/321 (7%)

Query  82   VSTNPIITDYSHLNSNLNKQNDTITHLQQVLQSPPKMKPKLKHTKEQLEFLNTRLKPLEP  141
            ++T+  + + ++L  ++ K + T+T       +P++ +    + K +L +L +R+ +   
Sbjct  100  IATQKQVNNLPNLPKDILKTKPTVT------SNPSNYNTANEEEKTRLVILASRISSQKE  153

Query  142  TKPATKP---------------ETEYGVDSFSNLRYKDIGTNEHKLLRTITADRMIPAFL  186
            T+P+T                 E EYG  +F N++ K+I+++E+KLLR ITADRMIPA+L
Sbjct  154  TQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIPAIL  213

Query  187  ITPISSQIAG-KVTAQVESDIFASMGRAVLIPKGSKVigyynnnnqigqyRLNIAWTRII  245
            ITPISS+I+G KV AQVESDI+A+MGRAVLIPKGS+ IGYYN+NN+IG+YRL+IAW RII
Sbjct  214  ITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRII  273

Query  246  TPQGINIMLTNARGADVKGYNGLVGKYISRNFQRYGIPLLTNTLSNGLLIGITSALANQ-  304
            TPQG+NI+L++A+GADVKGYNG++G   ++  +RYGIPL  +TLSNGLLIG+TS+L++  
Sbjct  274  TPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAM  333

Query  305  QNKKGD-GNPFFGDYLLMQLTRNTGMGINQIINQMLRQYGAQNPIIIIREGSRVFISPNL  363
            +NKKG+  + +FGDY++MQ+TR+TG+++N+II Q++R+    +PII IREGS++FISPN 
Sbjct  334  KNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNT  393

Query  364  DIFIPKPKDGEVLAEFFKEKK  384
            DI +P PK+ EVLA FF+E K
Sbjct  394  DIWFPIPKNNEVLAKFFNEEK  414

25) HPIN_03855 in NC_017372


> NC_011498_P1|26|G26|210134659|YP_002301098.1|Helicobacter_pylori_P12|-|28565..29830|virB10-1|HPP12_0462|VirB10 
type IV secretion 
protein
Length=421

 Score =  224 bits (834),  Expect = 8e-60, Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 233/310 (76%), Gaps = 24/310 (7%)

Query  82   VSTNPIITDYSHLNSNLNKQNDTITHLQQVLQSPPKMKPKLKHTKEQLEFLNTRLKPLEP  141
            ++T+  + + ++L  ++ K + T+T       +P++ +    + K +L +L +R+ +   
Sbjct  100  IATQKQVNNLPNLPKDILKTKPTVT------SNPSNYNTANEEEKTRLVILASRISSQKE  153

Query  142  TQP--AIKP-------------DTEYGVDSFSNLRYKDIGTNEHKLLRTITADRMIPAFL  186
            TQP  +IK              + EYG  +F N++ K+I+++E+KLLR ITADRMIPA+L
Sbjct  154  TQPPTSIKNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIPAIL  213

Query  187  ITPISSQIAG-KVTAQVESDIFASMGRAVLIPKGSKVigyynnnnqigqyRLNIAWTRII  245
            ITPISS+I+G KV AQVESDI+A+MGRAVLIPKGS+ IGYYN+NN+IG+YRL+IAW RII
Sbjct  214  ITPISSEIGGSKVVAQVESDIYATMGRAVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRII  273

Query  246  TPQGINIMLTNARGADVKGYNGLVGKYISRNFQRYGIPLLTNTLSNGLLIGITSALANQ-  304
            TPQG+NI+L++A+GADVKGYNG++G   ++  +RYGIPL  +TLSNGLLIG+TS+L++  
Sbjct  274  TPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLTEAM  333

Query  305  QNKKGD-GNPFFGDYLLMQLTRNTGMGINQVINQMLRQYGAQNPIIIIREGSRVFITPNL  363
            +NKKG+  + +FGDY++MQ+TR+TG+++N++I Q++R+    +PII IREGS++FI+PN 
Sbjct  334  KNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNT  393

Query  364  DIFIPKPKDG  373
            DI +P PK+ 
Sbjct  394  DIWFPIPKNN  403