Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
VirB10 type IV secretion protein |
NC_011498 (Helicobacter pylori P12) |
0.0 |
100 |
|
VirB10 type IV secretion protein |
NC_017379 (Helicobacter pylori Puno135) |
0.0 |
96 |
|
VirB10 type IV secretion protein |
NC_014555 (Helicobacter pylori PeCan4) |
0.0 |
95 |
|
VirB10 type IV secretion protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
3e-179 |
93 |
|
competence protein |
NC_019560 (Helicobacter pylori Aklavik117) |
3e-140 |
81 |
|
ComB3 protein |
NC_017367 (Helicobacter pylori F57) |
3e-140 |
81 |
|
competence protein |
NC_011333 (Helicobacter pylori G27) |
7e-140 |
81 |
|
competence protein |
NC_017358 (Helicobacter pylori Cuz20) |
2e-139 |
80 |
|
competence protein |
NC_017376 (Helicobacter pylori Santal49) |
3e-139 |
81 |
|
bacterial conjugation TrbI-like family protein |
NC_022130 (Helicobacter pylori SouthAfrica20) |
5e-139 |
81 |
|
competence protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
6e-139 |
80 |
|
competence protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
1e-134 |
79 |
|
ComB3 protein |
NC_017741 (Helicobacter pylori Shi112) |
9e-133 |
81 |
|
ComB3 protein |
NC_017740 (Helicobacter pylori Shi169) |
2e-132 |
80 |
|
ComB3 protein |
NC_010698 (Helicobacter pylori Shi470) |
3e-132 |
80 |
|
ComB3 protein |
NC_017739 (Helicobacter pylori Shi417) |
3e-132 |
80 |
|
competence protein |
NC_017919 (Helicobacter pylori XZ274) |
5e-131 |
87 |
|
competence protein |
NC_017926 (Helicobacter pylori XZ274) |
5e-131 |
87 |
|
membrane protein |
NC_021218 (Helicobacter pylori UM066) |
7e-124 |
80 |
|
membrane protein |
NC_021218 (Helicobacter pylori UM066) |
1e-72 |
51 |
|
ComB10 competence protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
8e-67 |
54 |
|
ComB3 protein |
NC_017737 (Helicobacter cetorum MIT 00-7128) |
3e-65 |
53 |
|
comB10 competence protein |
NC_020508 (Helicobacter pylori OK113) |
4e-64 |
51 |
|
conjugal transfer protein TrbI |
NC_017375 (Helicobacter pylori 83) |
5e-64 |
52 |
|
type IV secretion system protein VirB10 |
NC_017372 (Helicobacter pylori India7) |
8e-60 |
50 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011498_P1' AND ph.id_pai_orf='26' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc