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PAthogenisity Island DataBase (PAI DB)

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Homologs of tnp gene of NC_007168_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) tnp
( YP_251963.1 )

transposase for IS431mec

NC_007168
(Staphylococcus haemolyticus JCSC1435)

2e-34

100

2) A284_12402
( YP_007443146.1 )

transposase IS431

NC_020268
(Staphylococcus warneri SG1)

8e-34

3) LLKF_p0032
( YP_003354947.1 )

IS6/IS946 family transposase, C-terminus

NC_013657
(Lactococcus lactis KF147)

5e-12

4) str0107
( YP_140538.1 )

truncated IS1216 transposase

NC_006449
(Streptococcus thermophilus CNRZ1066)

1e-08

• Sequence Alignments

1) tnp in NC_007168


> NC_007168_R1|26|G26|70725049|YP_251963.1|Staphylococcus_haemolyticus_JCSC1435|+|27437..27688|tnp|SH0048|transposase 
for IS431mec
Length=83

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)

Query  1   MAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYGLYK  60
           MAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYGLYK
Sbjct  1   MAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYGLYK  60

Query  61  KNRRSLQICGFSPCHEISIMLTS  83
           KNRRSLQICGFSPCHEISIMLTS
Sbjct  61  KNRRSLQICGFSPCHEISIMLTS  83

2) A284_12402 in NC_020268


> NC_007168_R1|26|G26|70725049|YP_251963.1|Staphylococcus_haemolyticus_JCSC1435|+|27437..27688|tnp|SH0048|transposase 
for IS431mec
Length=83

 Score =  136 bits (501),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 80/83 (97%), Positives = 82/83 (99%), Gaps = 0/83 (0%)

Query  28   MAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYK  87
            MAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIY+LYK
Sbjct  1    MAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYGLYK  60

Query  88   KNRRSLQIYGFSPCHEISIMLAS  110
            KNRRSLQI GFSPCHEISIML+S
Sbjct  61   KNRRSLQICGFSPCHEISIMLTS  83

3) LLKF_p0032 in NC_013657


> NC_007168_R1|26|G26|70725049|YP_251963.1|Staphylococcus_haemolyticus_JCSC1435|+|27437..27688|tnp|SH0048|transposase 
for IS431mec
Length=83

 Score = 64.5 bits (225),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 38/68 (56%), Positives = 49/68 (73%), Gaps = 0/68 (0%)

Query  7   HRTVKYLNNLIEQDHRPIKRRNKFYRSLRTASTTIKGMETIRGIYKKNRRNGTLFGFSVS  66
           H T KYLNNLIEQDHR IK R+  Y+S+ TA  T+KG+E I G+YKKNRR+  + GFS  
Sbjct  15  HCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYGLYKKNRRSLQICGFSPC  74

Query  67  TEIKVLMG  74
            EI +++ 
Sbjct  75  HEISIMLT  82

4) str0107 in NC_006449


> NC_007168_R1|26|G26|70725049|YP_251963.1|Staphylococcus_haemolyticus_JCSC1435|+|27437..27688|tnp|SH0048|transposase 
for IS431mec
Length=83

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 29/59 (50%), Positives = 41/59 (70%), Gaps = 0/59 (0%)

Query  1   MIEQDHRPVKRHNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLV  59
           +IEQDHR +K ++  Y+S+ TA  T+KG+E I GLYKK R+   + GFS C EI ++L 
Sbjct  24  LIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYGLYKKNRRSLQICGFSPCHEISIMLT  82