Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of pilT gene of NC_003198_P9

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) pilT
( NP_458636.1 )

putative membrane protein

NC_003198
(Salmonella enterica CT18)

6e-72

100

2) STBHUCCB_44990
( YP_005219919.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

6e-72

100

3) pilT
( NP_807847.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

6e-72

100

4) TY21A_21630
( YP_007928486.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

6e-72

100

5) SPAB_05363
( YP_001591469.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

4e-46

6) ECL_00422
( YP_003610937.1 )

PilT protein

NC_014121
(Enterobacter cloacae ATCC 13047)

9e-46

7) pilT
( YP_005197431.1 )

putative conjugative transfer outer membrane protein PilT

NC_016816
(Pantoea ananatis LMG 5342)

1e-44

8) ECSE_P1-0109
( YP_002296134.1 )

PilT protein

NC_011419
(Escherichia coli SE11)

8e-45

9) SEEH1578_00605
( YP_008248857.1 )

PilT

NC_021811
(Salmonella enterica 41578)

8e-45

10) CFSAN002069_23035
( YP_008253310.1 )

invasion protein IagB

NC_021813
(Salmonella enterica CFSAN002069)

8e-45

11) pilT
( YP_006203608.1 )

pilus protein

NC_017718
(Salmonella enterica SL1344)

8e-45

12) SeHA_A0111
( YP_002043946.1 )

lytic transglycosylase PilT

NC_011081
(Salmonella enterica SL476)

8e-45

13) pilT
( YP_006200932.1 )

PilT

NC_017675
(Salmonella enterica ST4/74)

8e-45

14) O3K_25687
( YP_006781735.1 )

type IV prepilin cluster

NC_018659
(Escherichia coli 2011C-3493)

2e-44

15) EKO11_4730
( YP_005280347.1 )

lytic transglycosylase

NC_016904
(Escherichia coli KO11FL)

2e-44

16) pilT
( YP_006137023.1 )

IncI1 conjugal transfer lytic transglycosylase PilT

NC_017642
(Escherichia coli UMNK88)

2e-44

17) pilT
( YP_006127339.1 )

Type IVB thin prepilin peptidase

NC_017637
(Escherichia coli W)

2e-44

18) WFL_23650
( YP_006176108.1 )

type IV prepilin cluster

NC_017665
(Escherichia coli W)

2e-44

19) Ser39006_1488
( YP_008521870.1 )

Lytic transglycosylase catalytic

NC_022268
(Serratia sp. ATCC 39006)

3e-44

20) PAGR_g3867
( YP_005994575.1 )

transglycosylase

NC_017554
(Pantoea ananatis PA13)

4e-44

21) EJP617_06720
( YP_005817240.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

1e-43

22) pilT_2
( YP_002923808.1 )

twitching motility protein PilT

NC_012751
(Candidatus Hamiltonella defensa T5A)

2e-35

23) pilT
( YP_002925067.1 )

PilT lytic transglycosylase, SLT domain protein

NC_012752
(Candidatus Hamiltonella defensa T5A)

2e-35

24) pilT
( YP_048657.1 )

type IV pilus protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-33

25) pilT_3
( YP_002924036.1 )

PilT lytic transglycosylase

NC_012751
(Candidatus Hamiltonella defensa T5A)

3e-33

26) W5S_3532
( YP_006284474.1 )

Lytic transglycosylase PilT

NC_017845
(Pectobacterium sp. SCC3193)

3e-33

27) pilT2
( YP_003540642.1 )

conjugal transfer protein

NC_013973
(Erwinia amylovora ATCC 49946)

1e-32

28) pilT_4
( YP_002924198.1 )

PilT lytic transglycosylase

NC_012751
(Candidatus Hamiltonella defensa T5A)

2e-32

29) Pecwa_0632
( YP_003258063.1 )

lytic transglycosylase

NC_013421
(Pectobacterium wasabiae WPP163)

5e-32

30) pilT
( NP_808700.1 )

pilT protein

NC_004633
(Pseudomonas syringae DC3000)

1e-31

31) ECOPMV1_pHUSEC411like00096
( YP_008574648.1 )

invasion protein IagB

NC_022371
(Escherichia coli PMV-1)

2e-31

32) PSPTO_B0049
( NP_808635.1 )

pilT protein, putative

NC_004632
(Pseudomonas syringae DC3000)

2e-31

33) ECIAI39_3275
( YP_002409198.1 )

putative peptidoglycan-binding-like protein

NC_011750
(Escherichia coli IAI39)

3e-31

34) ECED1_3510
( YP_002399373.1 )

Peptidoglycan-binding-like protein

NC_011745
(Escherichia coli ED1a)

4e-31

35) ECUMN_3184
( YP_002413868.1 )

putative peptidoglycan-binding-like protein

NC_011751
(Escherichia coli UMN026)

6e-31

36) ECH74115_4125
( YP_002272319.1 )

lytic transglycosylase PilT

NC_011353
(Escherichia coli EC4115)

9e-31

37) Z4175
( NP_289408.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

9e-31

38) pbl
( YP_003079631.1 )

lytic transglycosylase

NC_013008
(Escherichia coli TW14359)

9e-31

39) CDCO157_3466
( YP_006314333.1 )

hypothetical protein

NC_017906
(Escherichia coli Xuzhou21)

9e-31

40) EC042_3052
( YP_006097347.1 )

putative lytic transglycosylase

NC_017626
(Escherichia coli 042)

3e-30

41) pilT
( YP_005817280.1 )

lytic transglycosylase

NC_017445
(Erwinia sp. Ejp617)

1e-29

42) pilT
( YP_002650205.1 )

lytic transglycosylase

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-29

43) pbl
( YP_006145299.1 )

putative peptidoglycan-binding-like protein

NC_017646
(Escherichia coli CE10)

8e-29

44) ECs3711
( NP_311738.1 )

hypothetical protein

NC_002695
(Escherichia coli Sakai)

1e-27

45) pilT
( YP_002261513.1 )

transglycosylase PilT

NC_011311
(Aliivibrio salmonicida LFI1238)

9e-27

46) EC55989_3132
( YP_002404117.1 )

peptidoglycan-binding-like protein precursor

NC_011748
(Escherichia coli 55989)

5e-25

47) ETEC_3041
( YP_006116589.1 )

putative peptidoglycan binding protein

NC_017633
(Escherichia coli ETEC H10407)

5e-25

48) ECIAI1_2966
( YP_002388316.1 )

putative peptidoglycan-binding-like protein

NC_011741
(Escherichia coli IAI1)

5e-25

49) EKO11_0884
( YP_005276589.1 )

lytic transglycosylase

NC_016902
(Escherichia coli KO11FL)

5e-25

50) pilT
( YP_006169956.1 )

Peptidoglycan-binding-like protein precursor

NC_017663
(Escherichia coli P12b)

5e-25

51) EcolC_0860
( YP_001723856.1 )

lytic transglycosylase

NC_010468
(Escherichia coli ATCC 8739)

8e-25

52) ECO111_3583
( YP_003235935.1 )

hypothetical protein

NC_013364
(Escherichia coli 11128)

2e-23

53) ECO26_3927
( YP_003230858.1 )

peptidoglycan-binding like protein precursor

NC_013361
(Escherichia coli 11368)

2e-23

54) ECO103_3415
( YP_003223294.1 )

peptidoglycan-binding-like protein precursor

NC_013353
(Escherichia coli 12009)

2e-23

55) O3M_05285
( YP_006768727.1 )

peptidoglycan-binding-like protein precursor

NC_018650
(Escherichia coli 2009EL-2050)

2e-23

56) O3O_20405
( YP_006782834.1 )

peptidoglycan-binding-like protein precursor

NC_018661
(Escherichia coli 2009EL-2071)

2e-23

57) O3K_05240
( YP_006777764.1 )

peptidoglycan-binding-like protein precursor

NC_018658
(Escherichia coli 2011C-3493)

2e-23

58) APECO78_17895
( YP_007382744.1 )

putative peptidoglycan binding protein

NC_020163
(Escherichia coli APEC O78)

2e-23

59) EcDH1_0834
( YP_006090806.1 )

lytic transglycosylase

NC_017625
(Escherichia coli DH1)

2e-23

60) pbl
( YP_006130161.1 )

putative peptidoglycan-binding-like protein precursor

NC_017638
(Escherichia coli DH1)

2e-23

61) ygeJ
( YP_006164039.1 )

putative peptidoglycan-binding-like protein precursor

NC_017660
(Escherichia coli KO11FL)

2e-23

62) ygeJ
( YP_006125730.1 )

putative lytic transglycosylase

NC_017635
(Escherichia coli W)

2e-23

63) ygeJ
( YP_006174462.1 )

putative peptidoglycan-binding-like protein precursor

NC_017664
(Escherichia coli W)

2e-23

64) YpsIP31758_A0005
( YP_001393266.1 )

transglycosylase SLT domain-containing protein

NC_009704
(Yersinia pseudotuberculosis IP 31758)

5e-22

65) iagB
( NP_902311.1 )

cell invasion protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

2e-19

66) iagB
( YP_007030615.1 )

cell invasion protein

NC_019670
(Pseudomonas sp. UW4)

5e-19

67) pRALTA_0212
( YP_001796093.1 )

lytic transglycosylase

NC_010529
(Cupriavidus taiwanensis LMG 19424)

7e-10

• Sequence Alignments

1) pilT in NC_003198


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  263 bits (983),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%)

Query  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60
            MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD
Sbjct  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60

Query  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120
            KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV
Sbjct  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120

Query  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158
            SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ
Sbjct  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158

2) STBHUCCB_44990 in NC_016832


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  263 bits (983),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%)

Query  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60
            MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD
Sbjct  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60

Query  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120
            KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV
Sbjct  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120

Query  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158
            SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ
Sbjct  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158

3) TY21A_21630 in NC_021176


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  263 bits (983),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%)

Query  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60
            MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD
Sbjct  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60

Query  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120
            KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV
Sbjct  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120

Query  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158
            SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ
Sbjct  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158

4) pilT in NC_004631


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  263 bits (983),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%)

Query  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60
            MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD
Sbjct  1    MCGYFSRLALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60

Query  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120
            KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV
Sbjct  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120

Query  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158
            SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ
Sbjct  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158

5) SPAB_05363 in NC_010102


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  177 bits (656),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 98/134 (74%), Positives = 118/134 (89%), Gaps = 0/134 (0%)

Query  16   RVDAFCFESAGAKYHIDPLLVKAIAIGESSLRPDVTNINRDKKTGQALSTDYGLMQVNSS  75
            +V+AFCF++A+AKYH+ PLL+K++AIGES+L P+ TN NRDKKTG+  STDYGLM VNS+
Sbjct  20   WVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNST  79

Query  76   HIASLIAQGYIRSSQDLLNRPCLNVQIGTWILAKHFQVCGISWNCLGSYNAGFRKDRHET  135
            HI+ L++ G IR  +DLLN+PCLNVQIGTWILAKHFQVCG+SWNCLGSYNAGFR DRHET
Sbjct  80   HIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHET  139

Query  136  RESYANRIYAIYRR  149
            RE YANRI  IY+R
Sbjct  140  RERYANRIWKIYQR  153

6) ECL_00422 in NC_014121


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  176 bits (652),  Expect = 9e-46, Method: Compositional matrix adjust.
 Identities = 99/134 (74%), Positives = 114/134 (86%), Gaps = 0/134 (0%)

Query  16   RAGAFCFDAAGAKYHIDPLLIQAIATGESSLRPGITNVNRDKKTGRALSTDYGLMQVNSS  75
            +  AFCFDAA+AKYH+ PLLI+++A GES+L P  TN NRDKKTG+  STDYGLM VNS+
Sbjct  20   WVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNST  79

Query  76   HIPALMAQGVIRSPQDLLTRPCLNVQIGTWILAKHFQVCGISWNCLGSYNAGFRQDRHET  135
            HIP L++ GVIR  +DLL +PCLNVQIGTWILAKHFQVCG+SWNCLGSYNAGFR DRHET
Sbjct  80   HIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHET  139

Query  136  RESYANRIYAIYRR  149
            RE YANRI  IY+R
Sbjct  140  RERYANRIWKIYQR  153

7) pilT in NC_016816


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 96/134 (72%), Positives = 111/134 (83%), Gaps = 0/134 (0%)

Query  7    RAQAFCFDAAGAKYHIDPLLIKAIATGESGLRPGVTHINRDPKTGRAVSTDYGLMQVNSS  66
            + QAFCFDAA+AKYH+ PLLIK++A GES L P  T+ NRD KTG+  STDYGLM VNS+
Sbjct  20   WVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNST  79

Query  67   HIPSLVAQGLIKSPQDLLTKPCLNVQTGTWILASHFQVCGVSWNCLGSYNAGFRKDRHET  126
            HIP LV+ G+I+  +DLL KPCLNVQ GTWILA HFQVCGVSWNCLGSYNAGFR DRHET
Sbjct  80   HIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHET  139

Query  127  RESYANRVYAIYKK  140
            RE YANR+  IY++
Sbjct  140  RERYANRIWKIYQR  153

8) ECSE_P1-0109 in NC_011419


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 89/132 (68%), Positives = 115/132 (88%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+DKKTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  INMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            ++MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKIWRIYRDMKG  172
            N+IW+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

9) SEEH1578_00605 in NC_021811


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 89/132 (68%), Positives = 115/132 (88%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+DKKTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  INMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            ++MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKIWRIYRDMKG  172
            N+IW+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

10) CFSAN002069_23035 in NC_021813


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 89/132 (68%), Positives = 115/132 (88%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+DKKTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  INMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            ++MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKIWRIYRDMKG  172
            N+IW+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

11) SeHA_A0111 in NC_011081


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 89/132 (68%), Positives = 115/132 (88%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+DKKTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  INMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            ++MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKIWRIYRDMKG  172
            N+IW+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

12) pilT in NC_017718


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 89/132 (68%), Positives = 115/132 (88%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+DKKTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  INMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            ++MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKIWRIYRDMKG  172
            N+IW+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

13) pilT in NC_017675


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  173 bits (640),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 89/132 (68%), Positives = 115/132 (88%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+DKKTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  INMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            ++MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKIWRIYRDMKG  172
            N+IW+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

14) EKO11_4730 in NC_016904


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 87/132 (66%), Positives = 114/132 (87%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLKPGAININKDRKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+D+KTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  IKMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            + MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKVWRIYRDMKG  172
            N++W+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

15) O3K_25687 in NC_018659


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 87/132 (66%), Positives = 114/132 (87%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLKPGAININKDRKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+D+KTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  IKMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            + MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKVWRIYRDMKG  172
            N++W+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

16) pilT in NC_017642


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 87/132 (66%), Positives = 114/132 (87%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLKPGAININKDRKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+D+KTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  IKMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            + MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKVWRIYRDMKG  172
            N++W+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

17) pilT in NC_017637


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 87/132 (66%), Positives = 114/132 (87%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLKPGAININKDRKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+D+KTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  IKMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            + MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKVWRIYRDMKG  172
            N++W+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

18) WFL_23650 in NC_017665


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 87/132 (66%), Positives = 114/132 (87%), Gaps = 0/132 (0%)

Query  41   CFAAAGARYQIEPLLLKAISAGESSLKPGAININKDRKTGKASSTDYGLMQINSTHIPKL  100
            CF AA+A+Y++ PLL+K+++ GES+L P A N N+D+KTGK  STDYGLM +NSTHIP+L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  101  IKMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA  160
            + MGVI+  +DL+ KPCLN++IG+WILA+HFQ+CGVSWNCLGSYNAGFR DRHETRE+YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  161  NKVWRIYRDMKG  172
            N++W+IY+   G
Sbjct  145  NRIWKIYQRQTG  156

19) Ser39006_1488 in NC_022268


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  171 bits (633),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 97/133 (73%), Positives = 111/133 (84%), Gaps = 0/133 (0%)

Query  16   VAAFCFDAAGAKYHIDPLLIKAIACGESRLNPSSININRDKRTGRELSQDYGLMQVNSTH  75
            V AFCFDAA+AKYH+ PLLIK++A GES L+P + N NRDK+TG+  S DYGLM VNSTH
Sbjct  21   VQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTH  80

Query  76   IPALIHDGVITSKNQLLTRPCLNVQIGTRILASHFQVCGISWNCLGSYNAGFRQDRHETR  135
            IP L+  GVI  KN+LL +PCLNVQIGT+ILA HFQVCG+SWNCLGSYNAGFR DRHETR
Sbjct  81   IPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETR  140

Query  136  ESYANRIYAIYKR  148
            E YANRI  IY+R
Sbjct  141  ERYANRIWKIYQR  153

20) PAGR_g3867 in NC_017554


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  171 bits (631),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 95/146 (66%), Positives = 118/146 (81%), Gaps = 3/146 (2%)

Query  9    LMLMVLFCA---RAHAFCFDAAGAKYHIDPLLIQAIATGESSLHAGITHINRDARTGRAL  65
            L L + +C+   + +AFCFDAA+AKYH+ PLLI+++A GES+L++  T+ NRD +TG+  
Sbjct  8    LALFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIK  67

Query  66   STDYGLMQVNSTHIPSLIAKGFISSPQDLLTKPCLNVQIGTWILATHFQVCGISWNCLGS  125
            STDYGLM VNSTHIP L++ G I   +DLL KPCLNVQIGTWILA HFQVCG+SWNCLGS
Sbjct  68   STDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGS  127

Query  126  YNAGFRKDRHETRESYANRVYAIYKK  151
            YNAGFR DRHETRE YANR+  IY++
Sbjct  128  YNAGFRPDRHETRERYANRIWKIYQR  153

21) EJP617_06720 in NC_017445


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  169 bits (626),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 96/143 (68%), Positives = 117/143 (82%), Gaps = 3/143 (2%)

Query  9    LFFLFCPHA---GAFCFDTAGAKYHIDPLLIKAIASGESTLRADATNINRDKKTGRALSM  65
            LF  +C+ +    AFCFD+A+AKYH+ PLLIK++A GES L ++ATN NRDKKTG+  S 
Sbjct  10   LFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKST  69

Query  66   DYGLMQVNSMHIPQLMALGYIDSAQELLTRPCLNVQIGTWILAQHFQVCGISWNCLGSYN  125
            DYGLM VNS HIP+L+++G I   ++LL +PCLNVQIGTWILA+HFQVCG+SWNCLGSYN
Sbjct  70   DYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYN  129

Query  126  AGFRQDRHETRESYANRIYAIYR  148
            AGFR DRHETRE YANRI  IY+
Sbjct  130  AGFRPDRHETRERYANRIWKIYQ  152

22) pilT_2 in NC_012751


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 71/131 (55%), Positives = 108/131 (83%), Gaps = 1/131 (0%)

Query  19   ALCFQAAGLRYQLDPLLLKAMAIQESGLNPRAINHNKNK-AGKVLSTDFGLMQINSLHIP  77
            A+CF+AA+ +Y++ PLL+K+MAI ES L+P+A N+N++K +GK+ STD+GLM +NS HIP
Sbjct  23   AFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIP  82

Query  78   TLKTLGVIRSKEDLLSNACLNVQTGAWILARHLNICGHHWSCLGSYNAGFAKNNQHRRIK  137
             L ++GVIR K+DLL+++CLNVQ G+WILA+H+++CG  W+CLGSYNAGF  + ++ R +
Sbjct  83   RLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRER  142

Query  138  YARQVYRRYQQ  148
            YA ++ + YQ+
Sbjct  143  YANRIWKIYQR  153

23) pilT in NC_012752


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 71/131 (55%), Positives = 108/131 (83%), Gaps = 1/131 (0%)

Query  19   ALCFQAAGLRYQLDPLLLKAMAIQESGLNPRAINHNKNK-AGKVLSTDFGLMQINSLHIP  77
            A+CF+AA+ +Y++ PLL+K+MAI ES L+P+A N+N++K +GK+ STD+GLM +NS HIP
Sbjct  23   AFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIP  82

Query  78   TLKTLGVIRSKEDLLSNACLNVQTGAWILARHLNICGHHWSCLGSYNAGFAKNNQHRRIK  137
             L ++GVIR K+DLL+++CLNVQ G+WILA+H+++CG  W+CLGSYNAGF  + ++ R +
Sbjct  83   RLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRER  142

Query  138  YARQVYRRYQQ  148
            YA ++ + YQ+
Sbjct  143  YANRIWKIYQR  153

24) pilT in NC_004547


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 76/138 (56%), Positives = 101/138 (74%), Gaps = 7/138 (5%)

Query  31   TVQPWVA--CINAASVKYFIDTLLIEAVMEQESSFNPHAVN--RSNSDG---SADYGLMM  83
            +V  WV   C++AA+ KY +  LLI ++   ES+++PHA N  R +  G   S+DYGLMM
Sbjct  16   SVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMM  75

Query  84   VNSGNIPKLIREGIISTEQDLLDKPCLNIQIGTRLLASHFQVCGITWNCLGSYNAGFGDK  143
            VNS +IP+L+  G+I   +DLL+KPCLN+QIGT++LA HFQVCG++WNCLGSYNAGF   
Sbjct  76   VNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPD  135

Query  144  RHRLRENYADIIWKRYER  161
            RH  RE YA+ IWK Y+R
Sbjct  136  RHETRERYANRIWKIYQR  153

25) pilT_3 in NC_012751


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 74/131 (57%), Positives = 102/131 (78%), Gaps = 1/131 (0%)

Query  13   AQAFCFNEAGAIYQIDPTLLKAIAQQESRLSAKAVNTNRDKR-GRVLSVDDGLMQVNSTH  71
             QAFCF+ A+A Y++ P L+K++A  ES L + A N NRDK+ G++ S D GLM VNSTH
Sbjct  21   VQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTH  80

Query  72   IPRLQKMGVLRHPEDLLHQPCLNVKIGAWILAKHLRACGVNWACLGSYNAGFHPRHEKKR  131
            IPRL  MGV+R+ +DLL++PCLNV+IG+WILAKH++ CGV+W CLGSYNAGF+P ++  R
Sbjct  81   IPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETR  140

Query  132  LHYAQQVYARY  142
             +YA+++   Y
Sbjct  141  ERYANRIWKIY  151

26) W5S_3532 in NC_017845


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 77/138 (56%), Positives = 101/138 (74%), Gaps = 7/138 (5%)

Query  31   TVQPWLA--CINAASVKYFIDSLLIEAVMEQESGFNPHAVN--RSNSDG---SADYGLMM  83
            +V  W+   C++AA+ KY + +LLI ++   ES ++PHA N  R +  G   S+DYGLMM
Sbjct  16   SVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMM  75

Query  84   VNSGNIPKLIREGIISTAQDLLDKPCLNIQIGTRLLASHFQVCGVSWNCLGSYNAGFGDK  143
            VNS +IP+L+  G+I   +DLL+KPCLN+QIGT++LA HFQVCGVSWNCLGSYNAGF   
Sbjct  76   VNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPD  135

Query  144  RHRLRENYADIIWKRYER  161
            RH  RE YA+ IWK Y+R
Sbjct  136  RHETRERYANRIWKIYQR  153

27) pilT2 in NC_013973


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 69/130 (54%), Positives = 100/130 (77%), Gaps = 1/130 (0%)

Query  24   AQAYCFREAGARYNVSPQLLRAIAQVESGMNPHAIGYNRDRQ-GRVTSRDFGLMQINSTH  82
             QA+CF  A+A+Y+VSP L++++A  ES ++PHA   NRD++ G++ S D+GLM +NSTH
Sbjct  21   VQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTH  80

Query  83   LAKLKAMGVISDERDLLTQPCLNVQTGAWILAQHLQVCGLTWQCLGSYNAGFADGNQARR  142
            +++L +MGVI D  DLL +PCLNVQ G+WILA+H+QVCG++W+CLGSYNAGF  + +  R
Sbjct  81   IPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETR  140

Query  143  MLYARKVYSI  152
              YA ++  I
Sbjct  141  ERYANRIWKI  150

28) pilT_4 in NC_012751


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  132 bits (484),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 65/120 (55%), Positives = 101/120 (85%), Gaps = 1/120 (0%)

Query  19   ALCFQAAGLRYQLDPVLLEAMAIQESGLNPRASDHNKNK-AGKVLSTDFGLMQINSLHIP  77
            A+CF+AA+ +Y++ P+L+ +MAI ES L+P+A+++N++K +GK+ STD+GLM +NS HIP
Sbjct  23   AFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIP  82

Query  78   ALKTLGVIRSKEDLLSNACLNVQIGAWILARHLNICGHHWSCLGSYNAGFANNNQHRRIK  137
             L ++GVIR K+DLL+++CLNVQIG+WILA+H+++CG  W+CLGSYNAGF  + ++ R +
Sbjct  83   RLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRER  142

29) Pecwa_0632 in NC_013421


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 74/138 (54%), Positives = 102/138 (74%), Gaps = 7/138 (5%)

Query  34   TVQPWLA--CIHTASVKYVIDSLLIEAVMEQESSFNPQAVN--RSNSDG---SADYGLMM  86
            +V  W+   C+++A+ KY + +LLI ++   ES+++P+A N  R +  G   S+DYGLMM
Sbjct  16   SVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMM  75

Query  87   VNSGNVPKLIREGIIATVQDLLDKPCLNIQIGTRLLASHFQVCGVSWNCLGSYNAGFGDK  146
            VNS ++P+L+  G+I   +DLL+KPCLN+QIGT++LA HFQVCGVSWNCLGSYNAGF   
Sbjct  76   VNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPD  135

Query  147  RHRLREKYANLIWERYKR  164
            RH  RE+YAN IW  Y+R
Sbjct  136  RHETRERYANRIWKIYQR  153

30) pilT in NC_004633


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  129 bits (474),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 68/146 (47%), Positives = 111/146 (77%), Gaps = 4/146 (2%)

Query  6    LVLAL-SAPMQASAFCFQEAGQRYGVDPVLLQAIGIQESKLQPGAVNLNRDS-SGKVLST  63
            L ++L S P+   AFCF+ A+ +Y V P+L+++++I ES+L+P A N NRD  +GK+ ST
Sbjct  10   LFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKST  69

Query  64   DYGVMQISTRNANRLVRMGLITRAEDLLTNACFNVQAGAWVLAQHLRVCGNTWRCLGSYN  123
            DYG+M +++ +  RLV MG+I   +DLL ++C+NVQ G+W+LA+H++VCG +W CLGSYN
Sbjct  70   DYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYN  129

Query  124  AGFDPSQRQEQRRLHYAQQVRNVYDR  149
            AGF P +++ + R  YA++++++Y+R
Sbjct  130  AGFRPDRHETRER--YANRIWKIYQR  153

31) ECOPMV1_pHUSEC411like00096 in NC_022371


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  129 bits (472),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 70/127 (56%), Positives = 95/127 (75%), Gaps = 1/127 (0%)

Query  32   CFITAGKRYSIDPGLLKIIARRESSLNPRAINHNRNDR-GKIISTDYGIMQINSTHIPGL  90
            CF +A+ +Y + P L+K +A  ES+L+P+A N+NR+ + GKI STDYG+M +NSTHIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  91   KKMGIIRSEKDLLNNVCLNIQTGAWILARHFQRCGVNWECLGSYNAGFSKSNTHRRMKYA  150
              MG+IR  +DLLN+ CLN+Q G+WILA+HFQ CGV+W+CLGSYNAGF     + R +YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  151  RQIYSAY  157
             +I   Y
Sbjct  145  NRIWKIY  151

32) PSPTO_B0049 in NC_004632


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 64/133 (49%), Positives = 104/133 (79%), Gaps = 3/133 (2%)

Query  5    AFCFQEAGQRYGVDPVLLQAIGIQESKLQPGAVNLNRDS-SGKVLSTDYGVMQISTRNAN  63
            AFCF+ A+ +Y V P+L+++++I ES+L+P A N NRD  +GK+ STDYG+M +++ +  
Sbjct  23   AFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIP  82

Query  64   RLVRMGLITRAEDLLTNACFNVQAGAWVLAQHLRVCGNTWRCLGSYNAGFDPSQRQEQRR  123
            RLV MG+I   +DLL ++C+NVQ G+W+LA+H++VCG +W CLGSYNAGF P +++ + R
Sbjct  83   RLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRER  142

Query  124  LHYAQQVRNVYDR  136
              YA++++++Y+R
Sbjct  143  --YANRIWKIYQR  153

33) ECIAI39_3275 in NC_011750


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 70/153 (46%), Positives = 103/153 (68%), Gaps = 3/153 (1%)

Query  9    LSIFMFSILITKMSFASSACFNEAGSIFRIEPNLIKAIALVESNLKNDSIGKNRDKKNN-  67
            L++FM   L +      + CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   
Sbjct  8    LALFM--TLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGK  65

Query  68   IKSFDYGLMQINQMHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCL  127
            IKS DYGLM +N  HIP L   G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CL
Sbjct  66   IKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCL  125

Query  128  GTYNAGFAMENQKKRLQYAKKIYVVYTRLNGID  160
            G+YNAGF  + +  R +YA++I  +Y R  G +
Sbjct  126  GSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158

34) ECED1_3510 in NC_011745


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 74/155 (48%), Positives = 107/155 (70%), Gaps = 4/155 (2%)

Query  5    YFSVLILFSHTSIASVMNNNHLDSCFIQAGKRYLIAPELLKTIAQQESGLVATAINHNKN  64
            YFS L LF      ++  +     CF  A+ +Y ++P L+K++A  ES L + A N+N++
Sbjct  4    YFSRLALFMTLCSVPLWVQAF---CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRD  60

Query  65   K-SGKIISTDYGIMQINSSHIPELKKLGVIKDKDELLKNPCLNIHTGAWILARHFQRCGV  123
            K +GKI STDYG+M +NS+HIP L  +GVI+DK++LL++PCLN++ G+WILA+HFQ CGV
Sbjct  61   KKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGV  120

Query  124  NWECLGSYNAGFSKNNTARRMIYARIIHNRYFRKD  158
            +W+CLGSYNAGF  +    R  YA  I + Y R+ 
Sbjct  121  SWNCLGSYNAGFRPDRHETRERYANRIWKIYQRQT  155

35) ECUMN_3184 in NC_011751


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  127 bits (464),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 69/153 (46%), Positives = 101/153 (67%), Gaps = 3/153 (1%)

Query  9    LSIFMFSILITKMSFASSACFNEAGSIFRIEPNLIKAIALVESNLKNDSIGKNRDKKNN-  67
            L++FM   L +      + CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   
Sbjct  8    LALFM--TLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGK  65

Query  68   IKSVDYGLMQINQMHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCL  127
            IKS DYGLM +N  HIP L   G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CL
Sbjct  66   IKSTDYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCL  125

Query  128  GTYNAGFAMENKKKRLQYAKKIYVVYTRLNEID  160
            G+YNAGF  +    R +YA++I  +Y R    +
Sbjct  126  GSYNAGFRPDRHETRERYANRIWKIYQRQTGAQ  158

36) ECH74115_4125 in NC_011353


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  126 bits (462),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 93/129 (73%), Gaps = 1/129 (0%)

Query  28   CFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNN-IKSFDYGLMQINQMHIPML  86
            CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   IKS DYGLM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYA  146
               G+I+D  DLL++PCLN++IGT IL KHF  CG++W+CLG+YNAGF  D +  R +YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  KKIYIVYTR  155
            ++I  +Y R
Sbjct  145  NRIWKIYQR  153

37) Z4175 in NC_002655


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  126 bits (462),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 93/129 (73%), Gaps = 1/129 (0%)

Query  28   CFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNN-IKSFDYGLMQINQMHIPML  86
            CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   IKS DYGLM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYA  146
               G+I+D  DLL++PCLN++IGT IL KHF  CG++W+CLG+YNAGF  D +  R +YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  KKIYIVYTR  155
            ++I  +Y R
Sbjct  145  NRIWKIYQR  153

38) pbl in NC_013008


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  126 bits (462),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 93/129 (73%), Gaps = 1/129 (0%)

Query  28   CFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNN-IKSFDYGLMQINQMHIPML  86
            CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   IKS DYGLM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYA  146
               G+I+D  DLL++PCLN++IGT IL KHF  CG++W+CLG+YNAGF  D +  R +YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  KKIYIVYTR  155
            ++I  +Y R
Sbjct  145  NRIWKIYQR  153

39) CDCO157_3466 in NC_017906


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  126 bits (462),  Expect = 9e-31, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 93/129 (73%), Gaps = 1/129 (0%)

Query  28   CFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNN-IKSFDYGLMQINQMHIPML  86
            CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   IKS DYGLM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYA  146
               G+I+D  DLL++PCLN++IGT IL KHF  CG++W+CLG+YNAGF  D +  R +YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  KKIYIVYTR  155
            ++I  +Y R
Sbjct  145  NRIWKIYQR  153

40) EC042_3052 in NC_017626


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 65/134 (49%), Positives = 94/134 (71%), Gaps = 1/134 (0%)

Query  28   CFNEAGSIFRIEPNLIKAIALVESNLKNDSIGKNRDKKNN-IKSFDYGLMQINQMHIPML  86
            CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   IKS DYGLM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMENQKKRLQYA  146
               G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  + +  R +YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  KKIYVVYTRLNEID  160
            ++I  +Y R    +
Sbjct  145  NRIWKIYQRQTGAQ  158

41) pilT in NC_017445


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 54/128 (43%), Positives = 97/128 (76%), Gaps = 1/128 (0%)

Query  25   SFCYASAGQRYHIAPDLLRAIGLVESHENSLSQGVNRDSR-GRVVSRDFGLMQINDRHLA  83
            +FC+ +A+ +YH++P L++++++ ES+ ++ +   NRD + G++ S D+GLM +N  H++
Sbjct  23   AFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIP  82

Query  84   ELRRLGIVDSSNELLSRPCLNIQIGAWILARHLRLCGNTWQCLGSYNAGFSRKNKVRRQQ  143
             L  +G++   N+LL++PCLN+QIG+WILA+H+++CG +W+CLGSYNAGF       R++
Sbjct  83   RLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRER  142

Query  144  YAQRVYKV  151
            YA+R+ K+
Sbjct  143  YANRIWKI  150

42) pilT in NC_012214


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 54/128 (43%), Positives = 97/128 (76%), Gaps = 1/128 (0%)

Query  25   SFCYASAGQRYHIAPDLLRAIGLVESHENSLSQGVNRDSR-GRVVSRDFGLMQINDRHLA  83
            +FC+ +A+ +YH++P L++++++ ES+ ++ +   NRD + G++ S D+GLM +N  H++
Sbjct  23   AFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIP  82

Query  84   ELRRLGIVDSSNELLSRPCLNIQIGAWILARHLRLCGNTWQCLGSYNAGFSRKNKTRRQQ  143
             L  +G++   N+LL++PCLN+QIG+WILA+H+++CG +W+CLGSYNAGF       R++
Sbjct  83   RLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRER  142

Query  144  YAQRVYKV  151
            YA+R+ K+
Sbjct  143  YANRIWKI  150

43) pbl in NC_017646


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  120 bits (437),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 65/138 (48%), Positives = 95/138 (69%), Gaps = 1/138 (0%)

Query  13   MFSILITKMSFASSACFNEAGSIFRIEPNLIKAIALVESNLKNDSIGKNRDKKNN-IKSF  71
            +F  L +      + CF+ A++ +++ P LIK++A+ ESNL  ++   NRDKK   IKS 
Sbjct  10   LFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKST  69

Query  72   DYGLMQINQMHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYN  131
            DYGLM +N  HIP L   G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CLG+YN
Sbjct  70   DYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYN  129

Query  132  AGFAMENQKKRLQYAKKI  149
            AGF  + +  R +YA++I
Sbjct  130  AGFRPDRHETRERYANRI  147

44) ECs3711 in NC_002695


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 63/121 (53%), Positives = 87/121 (72%), Gaps = 1/121 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKKNN-IKSFDYGLMQINQMHIPMLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDKK   IKS DYGLM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYAKKIYIVYT  120
              DLL++PCLN++IGT IL KHF  CG++W+CLG+YNAGF  D +  R +YA++I  +Y 
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANRIWKIYQ  152

Query  121  R  121
            R
Sbjct  153  R  153

45) pilT in NC_011311


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  113 bits (412),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 63/138 (46%), Positives = 101/138 (74%), Gaps = 5/138 (3%)

Query  6    LFLSVASLN--VNAFCFEEAGRYYDVSPTLLTSIAMVESNLQADAVNENRNKR-GEVVSV  62
            LF+++ S+   V+AFCF+ A+  Y+VSP L+ S+A+ ESNL+++A N+NR+K+ G + S 
Sbjct  10   LFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKST  69

Query  63   DYGLMQINSTWFSRLSRFGV--SKDNLLNDACFNVHIGAWVLSQNFASHGYNWNSIGAYN  120
            DYGLM +NST ++RL   GV   K++LLN +C+NV+IG+W+L+++F   G +WN +G+YN
Sbjct  70   DYGLMMVNSTHIPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYN  129

Query  121  AGFSAKNAAARARYIRKV  138
            AGF +    +R RY  ++
Sbjct  130  AGFRPDRHETRERYANRI  147

46) EC55989_3132 in NC_011748


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 60/122 (50%), Positives = 87/122 (72%), Gaps = 1/122 (0%)

Query  28   CSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLL  86
            C + A++ +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYA  146
               G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  PK  148
             +
Sbjct  145  NR  146

47) ETEC_3041 in NC_017633


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 60/122 (50%), Positives = 87/122 (72%), Gaps = 1/122 (0%)

Query  28   CSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLL  86
            C + A++ +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYA  146
               G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  PK  148
             +
Sbjct  145  NR  146

48) ECIAI1_2966 in NC_011741


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 60/122 (50%), Positives = 87/122 (72%), Gaps = 1/122 (0%)

Query  28   CSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLL  86
            C + A++ +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYA  146
               G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  PK  148
             +
Sbjct  145  NR  146

49) EKO11_0884 in NC_016902


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 60/122 (50%), Positives = 87/122 (72%), Gaps = 1/122 (0%)

Query  28   CSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLL  86
            C + A++ +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYA  146
               G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  PK  148
             +
Sbjct  145  NR  146

50) pilT in NC_017663


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  107 bits (390),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 60/122 (50%), Positives = 87/122 (72%), Gaps = 1/122 (0%)

Query  28   CSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLL  86
            C + A++ +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  87   KKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYA  146
               G+I+D  DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  147  PK  148
             +
Sbjct  145  NR  146

51) EcolC_0860 in NC_010468


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  106 bits (387),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 59/114 (52%), Positives = 83/114 (73%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYGLMQINQMHIPLLKKCGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DYGLM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

52) APECO78_17895 in NC_020163


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

53) EcDH1_0834 in NC_017625


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

54) pbl in NC_017638


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

55) ygeJ in NC_017660


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

56) ECO103_3415 in NC_013353


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

57) O3M_05285 in NC_018650


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

58) O3O_20405 in NC_018661


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

59) O3K_05240 in NC_018658


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

60) ECO111_3583 in NC_013364


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

61) ECO26_3927 in NC_013361


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

62) ygeJ in NC_017635


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

63) ygeJ in NC_017664


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/114 (51%), Positives = 82/114 (72%), Gaps = 1/114 (0%)

Query  2    FRIEPNLIKAIALVESNLKKDSIGKNRDKNNN-IKSLDYWLMQINQMHIPLLKKRGIIKD  60
            +++ P LIK++A+ ESNL  ++   NRDK+   IKS DY LM +N  HIP L   G+I+D
Sbjct  33   YHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVIRD  92

Query  61   ERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPK  114
              DLL++PCLN++IGT IL +HF  CGV+W+CLG+YNAGF  D +  R++YA +
Sbjct  93   KNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANR  146

64) YpsIP31758_A0005 in NC_009704


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score = 97.8 bits (352),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 61/143 (43%), Positives = 100/143 (70%), Gaps = 6/143 (4%)

Query  10   LILTL-LVPLSSYAYCFQAAGDTYQIDPLLLISIADVESSMNYKAIGQN--KKNGVVKSE  66
            L++TL  VPL   A+CF+AA+  Y++ PLL+ S+A  ES+++  A  +N  KK G +KS 
Sbjct  10   LFMTLCSVPLWVQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKST  69

Query  67   DLGLMQINTSWLPKLGKSFGITRE--HLLNNPCQNVYVGAYVLANNISSNGVNWESIGAY  124
            D GLM +N++ +P+L  S G+ R+  +LLN+PC NV +G+ +LA+++   GV+W+ +G+Y
Sbjct  70   DYGLMMVNSTHIPRLV-SMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSY  128

Query  125  NAGFKSANEEFRLRYAKKVYSKY  147
            NAGF++  +E R RYA+++   Y
Sbjct  129  NAGFRPDRHETRERYANRIWKIY  151

65) iagB in NC_005085


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score = 89.1 bits (319),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 54/134 (41%), Positives = 88/134 (66%), Gaps = 8/134 (5%)

Query  20   CWDYAGTMFNISPDLLYAIAQQESGMKPDAIGRNRDG------SRDLGLMQINSAHLPRL  73
            C D A++ +++SP L+ ++A  ES + P+A   NRD       S D GLM +NS+H+PRL
Sbjct  25   CFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRL  84

Query  74   RQLGV--NERQLLESPCLSVVVGASILSDMMKRYGYSWEAVGAYNAGLSPNRHALRMRYA  131
              +GV  +  +LL+ PCL+V +G+ IL+   +  G SW+ +G+YNAG+ P+RH  R RYA
Sbjct  85   VSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYA  144

Query  132  RQVWQRYQKLQAPE  145
             ++W+ YQ+  +++
Sbjct  145  NRIWKIYQRQTGAQ  158

66) iagB in NC_019670


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score = 87.8 bits (314),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 53/132 (41%), Positives = 84/132 (64%), Gaps = 8/132 (6%)

Query  20   AQAWCWNEAGARHAIEPELLRAIADVESGQNPNAMNYNKDG------SRDIGLMQINSHH  73
             QA C + A+A+  + P L++++A  ES  +P+A N N+D       S D GLM +NS H
Sbjct  21   VQAFCFDAAAAKYHVSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTH  80

Query  74   LPRLSAQGITEQR--LLGDPCLSVEVGASVLADFIARYGYNWTAVGAYNAGHSPDRQAAR  131
            +PRL + G+  ++  LL  PCL+V++G+ +LA  +   G +W  +G+YNAG  PDR+ +R
Sbjct  81   IPRLVSMGVIRDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETR  140

Query  132  LRYARKVWQRYQ  143
             RYA ++W+ YQ
Sbjct  141  ERYANRIWKIYQ  152

67) pRALTA_0212 in NC_010529


> NC_003198_P9|26|G21|16763019|NP_458636.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|23042..23518|pilT|-|putative 
membrane protein
Length=158

 Score = 57.4 bits (198),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 48/117 (42%), Positives = 71/117 (61%), Gaps = 14/117 (11%)

Query  29   KFHGVSPSLLRSIALQESGMRPWVTNRNGNG------SEDIGLMQINSIHLPRLGRYGIT  82
            K+H VSP L++S+A+ ES + P  TN N +       S D GLM +NS H+PRL   G+ 
Sbjct  32   KYH-VSPLLIKSMAIGESNLDPHATNDNRDKKTGKIKSTDYGLMMVNSTHIPRLVSMGVI  90

Query  83   RAH---LFDGCINAYVGAWILRENIQRFGPTWKAVGAYNAS-SPDKQ---LRYANQI  132
            R     L   C+N  +G+WIL  ++Q  G +W+ +G+YNA+  PD++    RYAN+I
Sbjct  91   RDKNDLLNKPCLNVQIGTWILAKHFQVCGVSWNCLGSYNAGFRPDRHETRERYANRI  147