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Homologs of hrpE gene of EF514224

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HrpE
( YP_234289.1 )

type III secretion protein HrpE

NC_007005
(Pseudomonas syringae B728a)

5e-77

2) hrpE
( YP_273536.1 )

type III secretion component protein HrpE

NC_005773
(Pseudomonas syringae 1448A)

2e-58

3) hrpE
( NP_791213.1 )

type III secretion protein HrpE

NC_004578
(Pseudomonas syringae DC3000)

4e-56

4) Pmen_0026
( YP_001185533.1 )

HrpE/YscL family type III secretion apparatus protein

NC_009439
(Pseudomonas mendocina ymp)

6e-28

• Sequence Alignments

1) HrpE in NC_007005


> EF514224|26|G22|818898|AAB05082.1|Pseudomonas_syringae_pv._syringae_61|-|19882..20463|hrpE|-|HrpE
Length=193

 Score =  280 bits (1046),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 186/193 (97%), Positives = 190/193 (99%), Gaps = 0/193 (0%)

Query  1    MLAKRSITLTADAVLPEPVLRREYIANSLLARDILTDAQRQAEQMLVLEQAKADRRHQEA  60
            MLAKRSITLTADAVLPEPVLRRE IANSLLARDILTDA+RQAEQ+LVLEQAKAD+RHQEA
Sbjct  1    MLAKRSITLTADAVLPEPVLRREDIANSLLARDILTDARRQAEQLLVLEQAKADHRHQEA  60

Query  61   LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALSQLLDETTLAERARALVRNLAA  120
            LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEAL QLLDETTLAERARALVRNLAA
Sbjct  61   LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALCQLLDETTLAERARALVRNLAA  120

Query  121  SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWALKRDATLATESLRLSDANGAFEIDWA  180
            SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHW LKRDATL+TESLRLSDANGAFEIDWA
Sbjct  121  SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWELKRDATLTTESLRLSDANGAFEIDWA  180

Query  181  TLRNGLAGAEPAA  193
            TLRNGLAGAEPAA
Sbjct  181  TLRNGLAGAEPAA  193

2) hrpE in NC_005773


> EF514224|26|G22|818898|AAB05082.1|Pseudomonas_syringae_pv._syringae_61|-|19882..20463|hrpE|-|HrpE
Length=193

 Score =  218 bits (810),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 159/193 (83%), Positives = 181/193 (94%), Gaps = 0/193 (0%)

Query  1    MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQA  60
            MLAKRSITLTA A+LPEPVLRREDIANSLLARD+L+DA+RQAEQ+LVLEQ KAD  HQ+A
Sbjct  1    MLAKRSITLTADAVLPEPVLRREDIANSLLARDILTDARRQAEQLLVLEQAKADHRHQEA  60

Query  61   LASFWENANAFLaelqvqrevlqqqaMAAVeellseslRHLLDDTTLAERARALVKNLAA  120
            LA FWE ANAFL EL+VQRE LQQQAM+AVEELL+E+L +LLD+TTLAERARALV+NLAA
Sbjct  61   LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALCQLLDETTLAERARALVRNLAA  120

Query  121  SQLNEAVATLSVHPDMAEPVAEWLADSRFAQYWQLKRDASLTTERLRLSDANGAFDIDWA  180
            SQLNEAVATLSVHP+MAEPVAEWLA+SRFA+ W+LKRDA+LTTE LRLSDANGAF+IDWA
Sbjct  121  SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWELKRDATLTTESLRLSDANGAFEIDWA  180

Query  181  TLRNGLAGRDSSA  193
            TLRNGLAG +++A
Sbjct  181  TLRNGLAGAEPAA  193

3) hrpE in NC_004578


> EF514224|26|G22|818898|AAB05082.1|Pseudomonas_syringae_pv._syringae_61|-|19882..20463|hrpE|-|HrpE
Length=193

 Score =  210 bits (781),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 149/193 (78%), Positives = 180/193 (94%), Gaps = 0/193 (0%)

Query  1    MLAKRSIALTAATLLREPILRREDIADSLLARDILADARQQATQILALEQEKAEHLQQQA  60
            MLAKRSI+LTA ++L EP+LRREDIA+SLLARDIL+DAR+QA Q+L LEQ KA+H +Q+A
Sbjct  1    MLAKRSITLTADAVLPEPVLRREDIANSLLARDILTDARRQAEQLLVLEQAKADHRHQEA  60

Query  61   LAQFWENANAFLGELQVQREALQEQAMTAVeellseslRHLLDDTTlaeraralarnlaa  120
            LAQFWE ANAFL+EL+VQREALQ+QAMTAVEELL+E+L +LLD+TTLAERARAL RNLAA
Sbjct  61   LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALCQLLDETTLAERARALVRNLAA  120

Query  121  SQLNEAVATLSVHPQIADAVAEWLADSRFSEHWQLKRDATIASDSLRLSDANGAFDIAWA  180
            SQLNEAVATLSVHP++A++VAEWLA+SRF+EHW+LKRDAT++++SLRLSDANGAF+I WA
Sbjct  121  SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWELKRDATLTTESLRLSDANGAFEIDWA  180

Query  181  DLRKGLLGVEPAA  193
             LR+GL G EPAA
Sbjct  181  TLRNGLAGAEPAA  193

4) Pmen_0026 in NC_009439


> EF514224|26|G22|818898|AAB05082.1|Pseudomonas_syringae_pv._syringae_61|-|19882..20463|hrpE|-|HrpE
Length=193

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 88/193 (46%), Positives = 136/193 (71%), Gaps = 1/193 (0%)

Query  1    MLTKRRFTL-GSAVLEEPILRRQLLAESlradellaqarlqaeqllqqaheqrqHYLDEA  59
            ML+KR +TL + AVL EP+LRR+ +A+SL A ++L++AR QAEQLL   + + +H  +EA
Sbjct  1    MLAKRSITLTADAVLPEPVLRREDIANSLLARDILTDARRQAEQLLVLEQAKADHRHQEA  60

Query  60   VARFWSEANALLQAIQEERASYQRDALSAVDSLLNIALSRLLDETDLPQRISALLRNLVV  119
            +A+FW  ANA+L+ ++ +R + Q++A++AV+ LL  AL +LLDET L++R  AL+RNL  
Sbjct  61   LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALCQLLDETTLAERARALVRNLAA  120

Query  120  GLPSKAEANLACHPEAASTVRAWLQTMGFDALWQVQEDPGMAPESLRLSNTLGTFHIDWP  179
            +  + A A L+ HPE A  V  WL    F   W+++ D+ ++ ESLRLS++ G+F+IDW+
Sbjct  121  SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWELKRDATLTTESLRLSDANGAFEIDWA  180

Query  180  SLRRGLIPSLPEA  192
            +LR GL  + P A
Sbjct  181  TLRNGLAGAEPAA  193