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Homologs of smi_1713 gene of NC_013853_P1

110

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) smi_1713
( YP_003446815.1 )

site-specific recombinase

NC_013853
(Streptococcus mitis B6)

0.0

100

2) BCE_0419
( NP_976747.1 )

DNA recombinase, putative

NC_003909
(Bacillus cereus ATCC 10987)

0.0

3) CKL_2620
( YP_001396003.1 )

hypothetical protein

NC_009706
(Clostridium kluyveri DSM 555)

0.0

4) CKR_2321
( YP_002472786.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

0.0

5) Ccel_2814
( YP_002507088.1 )

resolvase

NC_011898
(Clostridium cellulolyticum H10)

0.0

6) EFAU004_01597
( YP_005354799.1 )

resolvase family site-specific recombinase

NC_017022
(Enterococcus faecium Aus0004)

0.0

7) HM1_2862
( YP_001681382.1 )

DNA recombinase

NC_010337
(Heliobacterium modesticaldum Ice1)

0.0

8) Tthe_0815
( YP_003851447.1 )

Resolvase domain

NC_014410
(Thermoanaerobacterium thermosaccharolyticum DSM 571)

0.0

9) Pmob_0430
( YP_001567492.1 )

resolvase domain-containing protein

NC_010003
(Petrotoga mobilis SJ95)

0.0

10) Tph_c22970
( YP_006920986.1 )

resolvase

NC_018870
(Thermacetogenium phaeum DSM 12270)

0.0

11) Clocl_3656
( YP_005048041.1 )

site-specific recombinase, DNA invertase Pin

NC_016627
(Clostridium clariflavum DSM 19732)

0.0

12) Clo1313_2376
( YP_005688844.1 )

resolvase domain-containing protein

NC_017304
(Clostridium thermocellum DSM 1313)

0.0

13) Clocl_3697
( YP_005048075.1 )

site-specific recombinase, DNA invertase Pin

NC_016627
(Clostridium clariflavum DSM 19732)

1e-179

14) Mahau_2800
( YP_004464747.1 )

resolvase domain-containing protein

NC_015520
(Mahella australiensis 50-1 BON)

3e-179

15) Thet_1635
( YP_003904509.1 )

Resolvase domain-containing protein

NC_014538
(Thermoanaerobacter sp. X513)

6e-178

16) Teth514_1274
( YP_001662903.1 )

resolvase domain-containing protein

NC_010320
(Thermoanaerobacter sp. X514)

6e-178

17) Fnod_1612
( YP_001411109.1 )

resolvase domain-containing protein

NC_009718
(Fervidobacterium nodosum Rt17-B1)

2e-177

18) Ferpe_0670
( YP_005470916.1 )

site-specific recombinase, DNA invertase Pin

NC_017095
(Fervidobacterium pennivorans DSM 9078)

2e-177

19) Cthe_1671
( YP_001038087.1 )

recombinase

NC_009012
(Clostridium thermocellum ATCC 27405)

7e-177

20) Tph_c23370
( YP_006921026.1 )

resolvase

NC_018870
(Thermacetogenium phaeum DSM 12270)

2e-176

21) HM1_2980
( YP_001681500.1 )

DNA recombinase

NC_010337
(Heliobacterium modesticaldum Ice1)

2e-172

22) DET1067
( YP_181782.1 )

phage integrase site specific recombinase

NC_002936
(Dehalococcoides ethenogenes 195)

2e-171

23) SpiGrapes_2876
( YP_005063638.1 )

site-specific recombinase, DNA invertase Pin

NC_016633
(Sphaerochaeta pleomorpha Grapes)

3e-167

24) LRC_05140
( YP_004831754.1 )

recombinase/Resolvase

NC_015975
(Lactobacillus ruminis ATCC 27782)

2e-163

25) Clo1100_3560
( YP_005149490.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

1e-161

26) SSU05_0953
( YP_001198319.1 )

DNA recombinase

NC_009442
(Streptococcus suis 05ZYH33)

2e-160

27) SSU98_0960
( YP_001200518.1 )

DNA recombinase

NC_009443
(Streptococcus suis 98HAH33)

2e-160

28) SSUSC84_0859
( YP_003024869.1 )

DNA recombinase

NC_012924
(Streptococcus suis SC84)

2e-160

29) Amet_4005
( YP_001321746.1 )

resolvase domain-containing protein

NC_009633
(Alkaliphilus metalliredigens QYMF)

5e-159

30) Desdi_1292
( YP_007220199.1 )

site-specific recombinase, DNA invertase Pin

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

7e-159

31) MELS_2017
( YP_004767062.1 )

site-specific recombinase

NC_015873
(Megasphaera elsdenii DSM 20460)

1e-154

32) SCI_1214
( YP_008499141.1 )

hypothetical protein

NC_022238
(Streptococcus constellatus C1050)

2e-145

33) SCRE_1155
( YP_008495551.1 )

hypothetical protein

NC_022236
(Streptococcus constellatus C232)

2e-145

34) SCR2_1155
( YP_008511313.1 )

hypothetical protein

NC_022245
(Streptococcus constellatus C818)

2e-145

35) M643_03560
( YP_008280281.1 )

serine recombinase

NC_021826
(Listeria monocytogenes N1-011A)

1e-142

36) Csac_0475
( YP_001179304.2 )

recombinase

NC_009437
(Caldicellulosiruptor saccharolyticus DSM 8903)

8e-142

37) HM1_0629
( YP_001679245.1 )

hypothetical protein

NC_010337
(Heliobacterium modesticaldum Ice1)

8e-142

38) LMOSLCC2755_1716
( YP_006682166.1 )

recombinase/resolvase family protein

NC_018587
(Listeria monocytogenes SLCC2755)

8e-141

39) LJP_1443
( YP_005862715.1 )

Site-specific recombinase, DNA invertase Pin related protein

NC_017477
(Lactobacillus johnsonii DPC 6026)

4e-125

40) HMPREF0538_20498
( YP_004649000.1 )

phage integrase family site-specific recombinase

NC_015697
(Lactobacillus reuteri SD2112)

5e-125

41) Ccel_2729
( YP_002507018.1 )

resolvase

NC_011898
(Clostridium cellulolyticum H10)

4e-124

42) Desaci_1341
( YP_006465699.1 )

site-specific recombinase, DNA invertase Pin

NC_018068
(Desulfosporosinus acidiphilus SJ4)

1e-123

43) DHBDCA_p1321
( YP_006910335.1 )

Site-specific recombinase

NC_018866
(Dehalobacter sp. DCA)

6e-120

44) DSY3426
( YP_519659.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

2e-119

45) Desdi_1399
( YP_007220298.1 )

site-specific recombinase, DNA invertase Pin

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

6e-119

46) Dtox_1526
( YP_003191013.1 )

resolvase domain-containing protein

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

2e-118

47) HMPREF0538_20542
( YP_004649044.1 )

phage integrase family site-specific recombinase

NC_015697
(Lactobacillus reuteri SD2112)

3e-118

48) LGAS_1491
( YP_815285.1 )

site-specific recombinase, DNA invertase Pin related protein

NC_008530
(Lactobacillus gasseri ATCC 33323)

3e-118

49) Desgi_3517
( YP_007946519.1 )

site-specific recombinase, DNA invertase Pin

NC_021184
(Desulfotomaculum gibsoniae DSM 7213)

2e-117

50) ROI_03000
( YP_007830661.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021040
(Roseburia intestinalis M50/1)

6e-117

51) Clo1100_3475
( YP_005149411.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

2e-116

52) EUR_11320
( YP_007772381.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021010
(Eubacterium rectale DSM 17629)

6e-116

53) DSY4590
( YP_520823.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

1e-115

54) CLJU_c03770
( YP_003778561.1 )

recombinase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

1e-113

55) Clo1100_3409
( YP_005149348.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

6e-113

56) LM5578_1855
( YP_003413965.1 )

DNA recombinase

NC_013766
(Listeria monocytogenes 08-5578)

4e-112

57) LM5923_1807
( YP_003417010.1 )

DNA recombinase, putative

NC_013768
(Listeria monocytogenes 08-5923)

4e-112

58) Closa_2762
( YP_003822927.1 )

resolvase domain-containing protein

NC_014376
(Clostridium saccharolyticum WM1)

1e-110

59) HPL003_12150
( YP_005075410.1 )

Site-specific recombinase

NC_016641
(Paenibacillus terrae HPL-003)

6e-108

60) PPE_00831
( YP_003869219.1 )

Site-specific recombinase

NC_014483
(Paenibacillus polymyxa E681)

2e-107

61) Tph_c07870
( YP_006919518.1 )

resolvase

NC_018870
(Thermacetogenium phaeum DSM 12270)

2e-106

62) HM1_0131
( YP_001678761.1 )

resolvase, n-terminal:recombinase

NC_010337
(Heliobacterium modesticaldum Ice1)

3e-106

63) ES1_13620
( YP_007839871.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021043
(Eubacterium siraeum V10Sc8a)

6e-101

64) TepRe1_0923
( YP_004460397.1 )

recombinase

NC_015519
(Tepidanaerobacter acetatoxydans Re1)

1e-100

65) TepiRe1_1004
( YP_008618783.1 )

Recombinase

NC_019954
(Tepidanaerobacter acetatoxydans Re1)

1e-100

66) DCF50_p1382
( YP_006913373.1 )

putative site-specific recombinase

NC_018867
(Dehalobacter sp. CF)

3e-100

67) Closa_2757
( YP_003822922.1 )

resolvase domain-containing protein

NC_014376
(Clostridium saccharolyticum WM1)

2e-97

68) Dtox_1527
( YP_003191014.1 )

resolvase domain-containing protein

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

2e-96

69) Rumal_3915
( YP_004090224.1 )

Resolvase domain

NC_014825
(Ruminococcus albus 7)

3e-95

70) Rumal_2253
( YP_004105372.1 )

resolvase domain-containing protein

NC_014833
(Ruminococcus albus 7)

3e-95

71) Dhaf_2440
( YP_002458904.1 )

resolvase

NC_011830
(Desulfitobacterium hafniense DCB-2)

4e-95

72) Cthe_1700
( YP_001038114.1 )

recombinase

NC_009012
(Clostridium thermocellum ATCC 27405)

4e-95

73) OBV_44390
( YP_004884143.1 )

putative recombinase

NC_016048
(Oscillibacter valericigenes Sjm18-20)

9e-95

74) Bsel_2961
( YP_003701012.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

1e-94

75) SAK_0764
( YP_329391.1 )

prophage LambdaSa04, site-specific recombinase resolvase

NC_007432
(Streptococcus agalactiae A909)

8e-95

76) Bsel_2979
( YP_003701028.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

4e-94

77) SDSE_1359
( YP_006904911.1 )

hypothetical protein

NC_019042
(Streptococcus dysgalactiae AC-2713)

5e-94

78) Desdi_1761
( YP_007220632.1 )

site-specific recombinase, DNA invertase Pin

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

8e-94

79) Bsel_2989
( YP_003701036.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

2e-93

80) SANR_0787
( YP_008500522.1 )

site specific recombinase

NC_022239
(Streptococcus anginosus C238)

7e-93

81) ES1_04570
( YP_007839127.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021043
(Eubacterium siraeum V10Sc8a)

8e-91

82) HMPREF0573_11203
( YP_003719016.1 )

site-specific recombinase

NC_014246
(Mobiluncus curtisii ATCC 43063)

2e-90

83) CXIVA_07110
( YP_004707780.1 )

hypothetical protein

NC_015737
(Clostridium sp. SY8519)

5e-89

84) Closa_3176
( YP_003823329.1 )

resolvase domain-containing protein

NC_014376
(Clostridium saccharolyticum WM1)

8e-89

85) Acin_1875
( YP_004897224.1 )

Site-specific recombinase

NC_016077
(Acidaminococcus intestini RyC-MR95)

1e-88

86) CKL_3840
( YP_001397188.1 )

hypothetical protein

NC_009706
(Clostridium kluyveri DSM 555)

5e-88

87) Rumal_3820
( YP_004090136.1 )

Resolvase domain

NC_014825
(Ruminococcus albus 7)

1e-87

88) CKR_3390
( YP_002473855.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

1e-84

89) SeseC_00920
( YP_006042664.1 )

hypothetical protein

NC_017582
(Streptococcus equi ATCC 35246)

1e-83

90) CDHC02_1630
( YP_005165410.1 )

site-specific recombinase resolvase family protein

NC_016802
(Corynebacterium diphtheriae HC02)

4e-83

91) Acin_1945
( YP_004897293.1 )

site-specific recombinase

NC_016077
(Acidaminococcus intestini RyC-MR95)

4e-83

92) btf_176
( YP_007484627.1 )

site-specific recombinase, resolvase family

NC_020387
(Dehalococcoides mccartyi BTF08)

2e-82

93) FPR_01300
( YP_007798983.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021020
(Faecalibacterium prausnitzii SL3/3)

1e-81

94) Arch_1578
( YP_003697886.1 )

resolvase

NC_014218
(Arcanobacterium haemolyticum DSM 20595)

4e-79

95) SCI_1127
( YP_008499057.1 )

putative site-specific recombinase

NC_022238
(Streptococcus constellatus C1050)

1e-76

96) SCRE_1068
( YP_008495466.1 )

putative site-specific recombinase

NC_022236
(Streptococcus constellatus C232)

1e-76

97) SCR2_1068
( YP_008511228.1 )

putative site-specific recombinase

NC_022245
(Streptococcus constellatus C818)

1e-76

98) SSUD12_1150
( YP_006082694.1 )

site-specific recombinase

NC_017621
(Streptococcus suis D12)

4e-76

99) SMA_1372
( YP_005094991.1 )

Site-specific recombinase

NC_016749
(Streptococcus macedonicus ACA-DC 198)

8e-75

100) Clocl_3542
( YP_005047942.1 )

site-specific recombinase, DNA invertase Pin

NC_016627
(Clostridium clariflavum DSM 19732)

6e-72

101) Clo1100_3478
( YP_005149414.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

7e-72

102) Amet_4007
( YP_001321748.1 )

resolvase domain-containing protein

NC_009633
(Alkaliphilus metalliredigens QYMF)

1e-68

103) Clo1100_3562
( YP_005149492.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

9e-69

104) Pmob_0428
( YP_001567491.1 )

resolvase domain-containing protein

NC_010003
(Petrotoga mobilis SJ95)

1e-65

105) MELS_2015
( YP_004767060.1 )

site-specific recombinase

NC_015873
(Megasphaera elsdenii DSM 20460)

2e-64

106) Bsel_2980
( YP_003701029.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

4e-63

107) SpiGrapes_2795
( YP_005063561.1 )

site-specific recombinase, DNA invertase Pin

NC_016633
(Sphaerochaeta pleomorpha Grapes)

9e-63

108) HM1_2865
( YP_001681385.1 )

DNA recombinase

NC_010337
(Heliobacterium modesticaldum Ice1)

6e-61

109) Desde_1454
( YP_006429667.1 )

site-specific recombinase, DNA invertase Pin

NC_018017
(Desulfitobacterium dehalogenans ATCC 51507)

4e-58

110) Clocel_0801
( YP_003842335.1 )

Resolvase domain

NC_014393
(Clostridium cellulovorans 743B)

3e-54

• Sequence Alignments

1) smi_1713 in NC_013853


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  792 bits (2999),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 523/523 (100%), Positives = 523/523 (100%), Gaps = 0/523 (0%)

Query  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60
            MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120
            NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEVQ  180
            RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240
            VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300
            WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360
            QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420
            SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  IEGKleelqqqlliqAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480
            IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523
            NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

2) BCE_0419 in NC_003909


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  774 bits (2931),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 499/523 (96%), Positives = 520/523 (99%), Gaps = 0/523 (0%)

Query  1    MAVSRNVTVIPAIKRIGNNKNSESKPKIRVAAYCRVSTDSEEQASSYDIQIEHYTNYIKK  60
            MAVSRNVTVIPAIKR+GNNK SESKPKIRVAAYCRVSTDSEEQASSY+IQIEHYTNYIKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NKEWELAGIFADDGITGTNTKKRDEFNRMIEECMAGNIDMIITKSISRFARNTLDCLKYI  120
            NKEWELAGIFADDGITGTNTKKR+EFNRMIEECMAG+IDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RQLKDKNIAVFFEKENINTLDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEVQ  180
            RQLKDKNIAVFFEKENINT+DSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKAK  240
            VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQI+RGLEADGILTAAGKAK
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRDLFM  300
            WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPR+LFM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEEMVRRANLRGGKGGKKRVYSSKYALSSIVYCGQCGDIYRRVHWNNRGYKSIVWRCV  360
            QVQEEMVRRANLRG KGGKKRVYSSKYALSSIVYCG+CGDIYRRVHWNNRGYKSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLEEKDSECTAPTINEETLQTAVVKAINELLANKEPFLSTLQKNIATIFNEENDHTTDD  420
            SRLEEK+SECTAPTINEETLQTAVVKAINELLANKEPFLSTL+KNIAT+FNEEND++TDD
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  IDGKleelqqqlliqAKSKNDYEDVADEIYHLRELKQNALVENAEREGKRQRIADMTDFL  480
            I+GKLEELQQQLLIQAKSKNDYEDVADEIY+LRELKQNAL ENAEREGKRQRIA+MTDFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSCELEEYDEQLVRRLIEKVTIYEDKLTVEFKSGIEIGIEI  523
            NEQSCELEEYDEQLVRRLIEKVT+++DKLTVEFKSG+EI+IEI
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

3) CKL_2620 in NC_009706


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  771 bits (2916),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/523 (96%), Positives = 515/523 (99%), Gaps = 0/523 (0%)

Query  1    MVVSRNVTVIPAIKRVGNNKNSESKPKIRVAAYCRVSTDSEEQASSYDIQIEHYTNYIKK  60
            M VSRNVTVIPAIKRVGNNK SESKPKIRVAAYCRVSTDSEEQASSY+IQIEHYTNYIKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120
            NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEIQ  180
            RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGE+Q
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNHKRFLGYTKDENKQLVIDPKGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKAK  240
            VNHKRFLGYTKDENKQLVIDP GAEVVKRIYREYLEGASLLQI+RGLEADGILTAAGKAK
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHDPIIPRDLFM  300
            WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSH+PIIPR+LFM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEEMVRRANLRGGKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360
            QVQEEMVRRANLRG KGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLEEKGSECTASTINEEILQTAVVKAINELLANKEPFLSTLQKNIATVLNEENDNATVD  420
            SRLEEKGSECTA+TINEE LQTAVVKAINELLANKEPFLSTL+KNIATV+NEENDNAT D
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  IDGKleelqqqlliqAKSKNDYEDVADEIYRLRELKQNALVENAEREGKRQRIAEMTDFL  480
            I+GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNAL ENAEREGKRQRIAEMTDFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSCELEEYDEQLVRRLIEKVTIYEDKLTVEFKSGIEIDEEI  523
            NEQSCELEEYDEQLVRRLIEKVT+++DKLTVEFKSG+EID EI
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

4) CKR_2321 in NC_011837


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  771 bits (2916),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/523 (96%), Positives = 515/523 (99%), Gaps = 0/523 (0%)

Query  1    MVVSRNVTVIPAIKRVGNNKNSESKPKIRVAAYCRVSTDSEEQASSYDIQIEHYTNYIKK  60
            M VSRNVTVIPAIKRVGNNK SESKPKIRVAAYCRVSTDSEEQASSY+IQIEHYTNYIKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120
            NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEIQ  180
            RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGE+Q
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNHKRFLGYTKDENKQLVIDPKGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKAK  240
            VNHKRFLGYTKDENKQLVIDP GAEVVKRIYREYLEGASLLQI+RGLEADGILTAAGKAK
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHDPIIPRDLFM  300
            WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSH+PIIPR+LFM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEEMVRRANLRGGKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360
            QVQEEMVRRANLRG KGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLEEKGSECTASTINEEILQTAVVKAINELLANKEPFLSTLQKNIATVLNEENDNATVD  420
            SRLEEKGSECTA+TINEE LQTAVVKAINELLANKEPFLSTL+KNIATV+NEENDNAT D
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  IDGKleelqqqlliqAKSKNDYEDVADEIYRLRELKQNALVENAEREGKRQRIAEMTDFL  480
            I+GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNAL ENAEREGKRQRIAEMTDFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSCELEEYDEQLVRRLIEKVTIYEDKLTVEFKSGIEIDEEI  523
            NEQSCELEEYDEQLVRRLIEKVT+++DKLTVEFKSG+EID EI
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

5) Ccel_2814 in NC_011898


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  757 bits (2863),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/521 (94%), Positives = 511/521 (99%), Gaps = 0/521 (0%)

Query  1    MAVSRNVTVIPAIKRVGNNKNSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60
            MAVSRNVTVIPAIKRVGNNK SESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDLIITKSISRFARNTLDCLKYI  120
            NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKID+IITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RQLKDKNIAVFFEKENINTMDSKGEVLLTIMaslaqqesqslsqNVKLGIQYRYQQGEVQ  180
            RQLKDKNIAVFFEKENINTMDSKGE++LTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKSK  240
            VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQI+RGLEADGILTAAGK+K
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WRPETLKKILQNEKYIGDALLQKTYTIDFLSKRRVKNNGIVPQYYVENSHEPIIPRELFM  300
            WRPETLKKILQNEKYIGDALLQKTYT+DFLSK+RVKNNGIVPQYYVENSHEPIIPRELFM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEEMVRRANLRGGKGGKKRVYSSKYALSSIVYCGQCGNIYRRVHWNNRGYKSIVWRCV  360
            QVQEEMVRRANLRG KGGKKRVYSSKYALSSIVYCG+CG+IYRRVHWNNRGYKSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLEEKGSECTAPTINEEILQTAVVKAINELLANKEPFLSTLQKNIAAILNEGNDNATDD  420
            SRLEEKGSECTAPTINEE LQTAVVKAINELLANKEPFLSTL+KNIA+++NE NDNATDD
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  IDSKleelqqqlliqAKSKNDYEDVADKIYRLRELKQNALVESAEREGKRQRIAEMTDFL  480
            I++KLEELQQQLLIQAKSKNDYEDVAD IYRLRELKQNAL E+AEREGKRQRIAEMTDFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSCELEEYDEQLVRWLIEKVTIHANRVEVEFKAGISIDV  521
            NEQSCELEEYDEQLVR+LIEKVT+  +++ VEFK+G+ ID+
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

6) EFAU004_01597 in NC_017022


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  719 bits (2719),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 458/520 (89%), Positives = 504/520 (97%), Gaps = 0/520 (0%)

Query  1    MELSRNITVIPARKRVGNTAAAEQRPKLKVAAYCRVSTDSEEQASSYEVQVAHYTQFIQK  60
            M +SRN+TVIPA KRVGN  ++E +PK++VAAYCRVSTDSEEQASSYE+Q+ HYT++I+K
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NPEWELAGIYADDGITGTNTKKREEFNRMIQDCMDGNIDMIITKSISRFARNTLDCLKYI  120
            N EWELAGI+ADDGITGTNTKKREEFNRMI++CM G+IDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RELKEKNIPVFFEKENINTMDSKGEVLLTIMaslaqqesqslsqNIKLGLQYRFQNGEVR  180
            R+LK+KNI+VFFEKENINTMDSKGE++LTIMASLAQQESQSLSQN+KLG+QYR+Q+GEV+
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNHSRFLGYTKDEEGNLIIEPAEAEVVKRIYREYLEGASLLQIGRGLEADGILTGAGKTK  240
            VNH RFLGYTKDE+ +L+I+P  AEVVKRIYREYLEGASLLQI+RGLEADGILT+AGK+K
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WRPETLKKILQNEKYIGDALLQKTYTIDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300
            WRPETLKKILQNEKYIGDALLQKTYT+DFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEEMVRRANLRGGKGGKKRVYSSKYALSSIVYCGQCGDIYRRVHWNNRGYKSIVWRCV  360
            QVQEEMVRRANLRG KGGKKRVYSSKYALSSIVYCG+CGDIYRRVHWNNRGYKSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLEEKGSECTAPTINEETLQAAVVKAINELLTKKEPFLSTLQKNIATVLneendnttdd  420
            SRLEEKGSECTAPTINEETLQ+AVVKAINELL++KEPFLSTL+KNIATV+NEENDN+TDD
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  IDRKleelqqqlliqAKSKNDYEDVADEIYRLRELKQNALVENAEREGKRQRIAEMTDFL  480
            I+ KLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNAL ENAEREGKRQRIAEMTDFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSCELEEYDEQLVRRLIEKVTVFDEKMTIEFKSGVTIE  520
            NEQSCELEEYDEQLVRRLIEKVTVFD+K+T+EFKSGV I+
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEID  520

7) HM1_2862 in NC_010337


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  661 bits (2500),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/522 (74%), Positives = 465/522 (90%), Gaps = 0/522 (0%)

Query  1    MAAAKTVSVIPAKPKQNRTAEANARQKLRVAAYCRVSTDNEEQASSYEVQIEHYTRYIQS  60
            MA ++ V+VIPA  +      ++++ K+RVAAYCRVSTD+EEQASSYE+QIEHYT YI+ 
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NPEWELAGIFADEGITGTNTKKRAEFNRMIEECMAGRIDMVITKSISRFARNTLDCLKYI  120
            N EWELAGIFAD+GITGTNTKKR EFNRMIEECMAG+IDM+ITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RQLKDKGIPVFFEKENINTMDSKGEILLTIMaslaqqesqslsqNVRMGIAFRFQNGEIQ  180
            RQLKDK I+VFFEKENINTMDSKGEI+LTIMASLAQQESQSLSQNV++GI +R+Q+GE+Q
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNHNRFLGYTKDENKRLVIVPEEAEIVKRIYREFLEGASLLQIGRGLEADGILTAAGKPK  240
            VNH+RFLGYTKDENK+LVI PE AE+VKRIYRE+LEGASLLQI+RGLEADGILTAAGK+K
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WRPETIRKILKNEKYIGDALLQKTYTVDFLSKKRVINNGIVPQYYVENSHEPIIPRELFL  300
            WRPET++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRELF+
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEELARRANLRSGEKGGKRVYSSKYALSSIVFCGECGEIYRRVHWNNRGKKSIVWRCV  360
            QVQEE+ RRANLR+   G KRVYSSKYALSSIV+CG+CG+IYRRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLEEKGSDCGSPTVSEEDLQKAVLKAINSIIAGRDEFIETLRRNIETALGGEFDESTEA  420
            SRLEEKGS+C +PT++EE LQ AV+KAIN ++A ++ F+ TL++NI T +  E D++T+ 
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  IDKKLEELQHELLRLASTKAAYDSVANEIYRLRELRQETLASNSERQNKRQRIAEMMDFL  480
            I+ KLEELQ++LL  A +K  Y+ VA+EIYRLREL+Q++LA N+ER+ KRQRIAEM DFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  ESQSGVIFEYDEKLVRWLVEKVTVFEGGIVVKFKTGISVELD  522
            + QS  + EYDE+LVR+L+EKVTVF++ + V FK+G+ ++++
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

8) Tthe_0815 in NC_014410


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  640 bits (2418),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 373/521 (72%), Positives = 466/521 (90%), Gaps = 0/521 (0%)

Query  2    TTRNVTVIPARKRIGNSANAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNP  61
             +RNVTVIPA KR+GN+  +E  PK+RVAAYCRVSTDSEEQA+SYE QIEHYTNYIK N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  62   EWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQ  121
            EWELAGIFAD+GITGTNTKKREEFNRMIEECM GKIDMIITKSISRFARNTLDCLKYIRQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  122  LKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHIN  181
            LK+KNI+V+FEKENINT+DSKGEI+LTIMASLAQQESQSLSQNVKLGIQYRYQQG +++N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  182  HNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRWH  241
            H+RFLGYTKD + +LVI PE AE+VKRIYREYLEG+S+LQI+RGLEADGILT+AG+++W+
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  TSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQV  301
              T++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRE+FMQV
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  302  QEQLVKRRCVHISKNGKKRNYSNKHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCISR  361
            QE++V+R  ++  K GKKR YS+K +LS +V+CG+C +I+RRVHWNNRG KSIVWRC+SR
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSR  362

Query  362  LENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAILKKNIETVLSEDLDESTADID  421
            LE+ G  CTA+TI E+TL+  +V AIN  ++ K++FL+ LKKNI TV++E+ D++T DI+
Sbjct  363  LEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIE  422

Query  422  KRLEELQTELIQLANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFFNT  481
             +LEELQ +L+  A+SK+ Y+++ +EIYRLR+L+Q++L+ NA R++KR+RIAEMTDF+N 
Sbjct  423  GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNE  482

Query  482  QTGDITEFDDKLVRKLVEKATVYNDRLVVEFKSGLEIEINL  522
            Q+ ++ E+D++LVR+L+EK TV++D+L VEFKSG+EI+I++
Sbjct  483  QSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

9) Pmob_0430 in NC_010003


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  639 bits (2416),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 374/521 (72%), Positives = 465/521 (90%), Gaps = 0/521 (0%)

Query  2    TTRNVTVIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNP  61
             +RNVTVIPA KR+GN+  +E  PK+RVAAYCRVSTDSEEQA+SYE QIEHYTNYIK N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  62   EWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQ  121
            EWELAGIFAD+GITGTNTKKREEFNRMIEECM GKIDMIITKSISRFARNTLDCLKYIRQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  122  LKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHIN  181
            LK+KNI+V+FEKENINT+DSKGEI+LTIMASLAQQESQSLSQNVKLGIQYRYQQG +++N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  182  HNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRWH  241
            H+RFLGYTKD + +LVI PE AE+VKRIYREYLEG+S+LQI+RGLEADGILT+AG+++W+
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  TSTINKILRNEKYIGDALLQKTYTVDFLSKKRVANNGIVPQYYVENSHEPIIPREIFMQV  301
              T++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRE+FMQV
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  302  QEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGKCHEIFRRVHWNNRGKKSIVWRCVSR  361
            QE++V+R  ++  K GKKR YS++ +LS +V+CG C +I+RRVHWNNRG KSIVWRCVSR
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSR  362

Query  362  LENTGLFCTASTILEDTLKEKIVDAINVAVSGKNSFLAILKKNIETVLSEDLDESTADID  421
            LE+ G  CTA+TI E+TL+  +V AIN  ++ K++FL+ LKKNI TV++E+ D++T DI+
Sbjct  363  LEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIE  422

Query  422  KRLEELQTELIQKANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLNM  481
             +LEELQ +L+ +A+SK+ Y+++ +EIYRLR+L+Q++L+ NA R++KR+RIAEMTDFLN 
Sbjct  423  GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNE  482

Query  482  QTGGITEFDDKLVRKLIEKATVYNDRLVVEFKSGLEIEVNL  522
            Q+  + E+D++LVR+LIEK TV++D+L VEFKSG+EI++++
Sbjct  483  QSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

10) Tph_c22970 in NC_018870


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  639 bits (2414),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 372/521 (72%), Positives = 464/521 (90%), Gaps = 0/521 (0%)

Query  2    TTRNVTIIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNP  61
             +RNVT+IPA KR+GN+  +E  PK+RVAAYCRVSTDSEEQA+SYE QIEHYTNYIK N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  62   EWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQ  121
            EWELAGIFAD+GITGTNTKKREEFNRMIEECM GKIDMIITKSISRFARNTLDCLKYIRQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  122  LKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHIN  181
            LK+KNI+V+FEKENINT+DSKGEI+LTIMASLAQQESQSLSQNVKLGIQYRYQQG +++N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  182  HNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNHRWH  241
            H+RFLGYTKD + +LVI PE AE+VKRIYREYLEG+S+LQI+RGLEADGILT+AG+ +W+
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  TSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQV  301
              T++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRE+FMQV
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  302  QEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVSR  361
            QE++V+R  ++  K GKKR YS++ +LS +V+CG+C +I+RRVHWNNRG KSIVWRCVSR
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSR  362

Query  362  LENTGLFCTASTILEDTLKEKIIEAINVAVSGKNSFLAILKKNIETVLSADLDESTADID  421
            LE+ G  CTA+TI E+TL+  ++ AIN  ++ K++FL+ LKKNI TV++ + D++T DI+
Sbjct  363  LEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIE  422

Query  422  KRLEELQTELIQKANSKESYDNIVNEIYRLRDLRQETLSRNALRKDKRDRIAEMTDFLNT  481
             +LEELQ +L+ +A+SK+ Y+++ +EIYRLR+L+Q++L+ NA R +KR+RIAEMTDFLN 
Sbjct  423  GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNE  482

Query  482  QTGDITEFDDKLVRKLIEKVIVYDDRLVVEFKSGLEIEVNL  522
            Q+ ++ E+D++LVR+LIEKV V+DD+L VEFKSG+EI++++
Sbjct  483  QSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

11) Clocl_3656 in NC_016627


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  637 bits (2407),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 369/521 (71%), Positives = 466/521 (90%), Gaps = 0/521 (0%)

Query  2    TNRNVTVIPARKRIGNSAKAEEMPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNP  61
             +RNVTVIPA KR+GN+  +E  PK+RVAAYCRVSTDSEEQA+SYE QIEHYTNYIK N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  62   EWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQ  121
            EWELAGIFAD+GITGTNTKKREEFNRMIEECM GKIDMIITKSISRFARNTLDCLKYIRQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  122  LKDKNIPVYFEKENINTLDTKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHIN  181
            LKDKNI+V+FEKENINT+D+KGEI+LTIMASLAQQESQSLSQNVKLGIQYRYQQG +++N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  182  HNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRWH  241
            H+RFLGYTKD + +LVI PE AE+VKRIYREYLEG+S+LQI+RGLEADGILT+AG+++W+
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  TSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQV  301
              T++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRE+FMQV
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  302  QEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVSR  361
            QE++V+R  ++  K GKKR YS++ +LS +V+CG+C +I+RRVHWNNRG KSIVWRCVSR
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSR  362

Query  362  LENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAILKKNIETVLSEDLDESTANID  421
            LE+ G  CTA+TI E+TL+  +V AIN  ++ K++FL+ LKKNI TV++E+ D++T +I+
Sbjct  363  LEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIE  422

Query  422  KRLEELQTELIQKANSKEVYNNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLDM  481
             +LEELQ +L+ +A+SK+ Y+++ +EIYRLR+L+Q++L+ NA R++KR+RIAEMTDFL+ 
Sbjct  423  GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNE  482

Query  482  QTGDITEFDDKLVRKLVEKAIVYDDRIMIEFKSGLEIEVNL  522
            Q+ ++ E+D++LVR+L+EK  V+DD++ +EFKSG+EI++++
Sbjct  483  QSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

12) Clo1313_2376 in NC_017304


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  636 bits (2402),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 369/521 (71%), Positives = 464/521 (90%), Gaps = 0/521 (0%)

Query  2    TTRNVTVIPARKRIGNSANAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNP  61
             +RNVTVIPA KR+GN+  +E  PK+RVAAYCRVSTDSEEQA+SYE QIEHYTNYIK N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  62   EWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQ  121
            EWELAGIFAD+GITGTNTKKREEFNRMIEECM GKIDMIITKSISRFARNTLDCLKYIRQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  122  LKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHIN  181
            LK+KNI+V+FEKENINT+DSKGEI+LTIMASLAQQESQSLSQNVKLGIQYRYQQG +++N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  182  HNRFLGYTKDKDGNLVIVPEEAEIVKRIYKEYLEGSSMLQIARGLEADGILTGAGNPRWH  241
            H+RFLGYTKD + +LVI PE AE+VKRIY+EYLEG+S+LQI+RGLEADGILT+AG+++W+
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  TSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQV  301
              T++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRE+FMQV
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  302  QEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVSR  361
            QE++V+R  ++  K GKKR YS++ +LS +V+CG+C +I+RRVHWNNRG KSIVWRCVSR
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSR  362

Query  362  LENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAILKKNIETVLSVDLDETTADID  421
            LE+ G  CTA+TI E+TL+  +V AIN  ++ K++FL+ LKKNI TV++ + D++T DI+
Sbjct  363  LEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIE  422

Query  422  KRLEELQTELIQKANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLNT  481
             +LEELQ +L+ +A+SK+ Y+++ +EIYRLR+L+Q++L+ NA R++KR+RIAEMTDFLN 
Sbjct  423  GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNE  482

Query  482  QTGDITEFDDKLVRKLVEKAIAYDDRIVVEFKSGLEIEVNL  522
            Q+ ++ E+D++LVR+L+EK   +DD++ VEFKSG+EI++++
Sbjct  483  QSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

13) Clocl_3697 in NC_016627


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  623 bits (2353),  Expect = 1e-179, Method: Compositional matrix adjust.
 Identities = 374/521 (72%), Positives = 464/521 (90%), Gaps = 0/521 (0%)

Query  2    TTRNVTVIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNP  61
             +RNVTVIPA KR+GN+  +E  PK+RVAAYCRVSTDSEEQA+SYE QIEHYTNYIK N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  62   EWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQ  121
            EWELAGIFAD+GITGTNTKKREEFNRMIEECM GKIDMIITKSISRFARNTLDCLKYIRQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  122  LKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHIN  181
            LK+KNI+V+FEKENINT+DSKGEI+LTIMASLAQQESQSLSQNVKLGIQYRYQQG +++N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  182  HNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRWH  241
            H+RFLGYTKD + +LVI PE AE+VKRIYREYLEG+S+LQI+RGLEADGILT+AG+++W+
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  TSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQV  301
              T++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRE+FMQV
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  302  QEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGKCHEVFRRVHWNNRGKKSIVWRCVSR  361
            QE++V+R  ++  K GKKR YS++ +LS +V+CG C +++RRVHWNNRG KSIVWRCVSR
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSR  362

Query  362  LENTGLFCTASTILEDTLKEKIVEAINIAVSGKNSFLAILKKNIETVLNEDLDESTADID  421
            LE+ G  CTA+TI E+TL+  +V AIN  ++ K++FL+ LKKNI TV+NE+ D++T DI+
Sbjct  363  LEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIE  422

Query  422  KRleelqaeliqlaNSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLNM  481
             +LEELQ +L+  A+SK+ Y+++ +EIYRLR+L+Q++L+ NA R++KR+RIAEMTDFLN 
Sbjct  423  GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNE  482

Query  482  QTGGITEFDDKLVRKLIEKATVYNDRLVVEFKSGLEIEVNL  522
            Q+  + E+D++LVR+LIEK TV++D+L VEFKSG+EI++++
Sbjct  483  QSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

14) Mahau_2800 in NC_015520


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  621 bits (2347),  Expect = 3e-179, Method: Compositional matrix adjust.
 Identities = 377/523 (73%), Positives = 465/523 (89%), Gaps = 1/523 (0%)

Query  1    MAI-RNVTVIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKS  59
            MA+ RNVTVIPA KR+GN+  +E  PK+RVAAYCRVSTDSEEQA+SYE QIEHYTNYIK 
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  60   NPEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYI  119
            N EWELAGIFAD+GITGTNTKKREEFNRMIEECM GKIDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  120  RQLKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIH  179
            RQLK+KNI+V+FEKENINT+DSKGEI+LTIMASLAQQESQSLSQNVKLGIQYRYQQG ++
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  180  INHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNHR  239
            +NH+RFLGYTKD + +LVI PE AE+VKRIYREYLEG+S+LQI+RGLEADGILT+AG+ +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  240  WHTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVANNGIVPQYYVENSHEPIIPREIYM  299
            W+  T++KIL+NEKYIGDALLQKTYTVDFLSKKRV NNGIVPQYYVENSHEPIIPRE++M
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  300  QVQEELVRRRCVHISKNGKKRNYSNNHPLSQMVFCGKCHEVFRRVHWNNRGKKSIVWRCV  359
            QVQEE+VRR  ++  K GKKR YS++ +LS +V+CG C +++RRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  360  SRLENTGLFCTASTILEDTLKEKIVEAINIAVSGKNSFLAILKKNIETVLNEDLDESTAD  419
            SRLE+ G  CTA+TI E+TL+  +V AIN  ++ K++FL+ LKKNI TV+NE+ D++T D
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  420  IDKRleelqaeliqlaNSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFL  479
            I+ +LEELQ +L+  A+SK+ Y+++ +EIYRLR+L+Q++L+ NA R++KR+RIAEMTDFL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  480  NMQTGGITEFDDKLVRKLIEKATVYNDRLVVEFKSGLEIEVNL  522
            N Q+  + E+D++LVR+LIEK TV++D+L VEFKSG+EI++++
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

15) Thet_1635 in NC_014538


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  617 bits (2331),  Expect = 6e-178, Method: Compositional matrix adjust.
 Identities = 383/522 (74%), Positives = 462/522 (89%), Gaps = 0/522 (0%)

Query  1    MAVSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKK  60
            MAVS+NV +IPAIKR+GNN+  +  PK+RVAAYCRVSTDS+EQASSYE+QIEHYT++IKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NSEWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMIITKSISRFARNTLDCLHYI  120
            N EWE+AGIFADDGI+GTNTK+R+EFNRMI+ECMAGKIDMIITKSISRFARNTLDCL YI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RKLKDKNIAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVM  180
            R+LKDKNIAV+FEKENINT+D+KGEIMLTIMASLAQQESQSLSQNVKLG QYRYQQGEV 
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNCSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLEADGILTGAGKKR  240
            VN  RFLGYTKDENK+LVI PE AE+VKRIYREYLEG+S+ +I +GLEADGILT+AGK +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WHTSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENSHEAIIPREIFM  300
            W+  T++KIL NEKYIGDALLQKTYTVDFL+KKRV NNGIVPQYYVENSHE+IIPRE+FM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEELVRRSKGHISTSGKKRNFSANHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCV  360
            QVQEE+VRR++ +   +GKKR +S++  +S I++CG+CG+IYRRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLENTGLACHSRTVQEDMIGLATVDAINKLLGQKDDFLITLKENIETVISETDNNIVSe  420
            SRLE+ G  C + T++E+ +  A V AIN LL++K+ FL TLK NI TV++E ++N   +
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  idkkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFI  480
            I+ KLEELQ++LL  A+SK+DY+D+ADEIYRLRE +++ALAE+A + G +QR+ +M  F+
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSILLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDIE  522
            NEQS  LEEYDEQLVRRLIEK+TV+DDKLT+EFKSGVEIDIE
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

16) Teth514_1274 in NC_010320


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  617 bits (2331),  Expect = 6e-178, Method: Compositional matrix adjust.
 Identities = 383/522 (74%), Positives = 462/522 (89%), Gaps = 0/522 (0%)

Query  1    MAVSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKK  60
            MAVS+NV +IPAIKR+GNN+  +  PK+RVAAYCRVSTDS+EQASSYE+QIEHYT++IKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NSEWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMIITKSISRFARNTLDCLHYI  120
            N EWE+AGIFADDGI+GTNTK+R+EFNRMI+ECMAGKIDMIITKSISRFARNTLDCL YI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RKLKDKNIAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVM  180
            R+LKDKNIAV+FEKENINT+D+KGEIMLTIMASLAQQESQSLSQNVKLG QYRYQQGEV 
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNCSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLEADGILTGAGKKR  240
            VN  RFLGYTKDENK+LVI PE AE+VKRIYREYLEG+S+ +I +GLEADGILT+AGK +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WHTSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENSHEAIIPREIFM  300
            W+  T++KIL NEKYIGDALLQKTYTVDFL+KKRV NNGIVPQYYVENSHE+IIPRE+FM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEELVRRSKGHISTSGKKRNFSANHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCV  360
            QVQEE+VRR++ +   +GKKR +S++  +S I++CG+CG+IYRRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLENTGLACHSRTVQEDMIGLATVDAINKLLGQKDDFLITLKENIETVISETDNNIVSe  420
            SRLE+ G  C + T++E+ +  A V AIN LL++K+ FL TLK NI TV++E ++N   +
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  idkkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFI  480
            I+ KLEELQ++LL  A+SK+DY+D+ADEIYRLRE +++ALAE+A + G +QR+ +M  F+
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSILLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDIE  522
            NEQS  LEEYDEQLVRRLIEK+TV+DDKLT+EFKSGVEIDIE
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

17) Fnod_1612 in NC_009718


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  615 bits (2324),  Expect = 2e-177, Method: Compositional matrix adjust.
 Identities = 379/522 (73%), Positives = 460/522 (89%), Gaps = 0/522 (0%)

Query  1    MAVSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKK  60
            MAVS+NV +IPAIKR+GNN+  +  PK+RVAAYCRVSTDS+EQASSYE+QIEHYT++IKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NSEWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMVITKSISRFARNTLDCLQYI  120
            N EWE+AGIFADDGI+GTNTK+R+EFNRMI+ECMAGKIDM+ITKSISRFARNTLDCL+YI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RKLKDKNVAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVM  180
            R+LKDKN+AV+FEKENINT+D+KGEIMLTIMASLAQQESQSLSQNVKLG QYRYQQGEV 
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNCSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLETDGILTGAGKKR  240
            VN  RFLGYTKDENK+LVI PE AE+VKRIYREYLEG+S+ +I +GLE+DGILT+AGK +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WHTSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENNHEAIIPREIFM  300
            W+  T++KIL NEKYIGDALLQKTYTVDFL+KKRV NNGIVPQYYVEN+HE+IIPRE+FM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEELVRRSRGHISTSGKKRNFSSNHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCV  360
            QVQEE+VRR+  +   +GKKR +SS+  +S I++CG+CG+IYRRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLENTGLTCHSRTVLEDMIGIATVEAINKLIGQKDGFLTILKENIETVISETGNNVVSe  420
            SRLE+ G  C + T+ E+ +  A V AIN L+++K+ FL+ LK NI TV++E  +N   +
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  idkkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFL  480
            I+ KLEELQ++LL  A+SK+DY+D+ADEIYRLRE +++ALAE+A + G +QR+ +M  FL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSTLLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDIE  522
            NEQS  LEEYDEQLVRRLIEK+TV+DDKLT+EFKSGVEIDIE
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

18) Ferpe_0670 in NC_017095


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  615 bits (2324),  Expect = 2e-177, Method: Compositional matrix adjust.
 Identities = 379/522 (73%), Positives = 460/522 (89%), Gaps = 0/522 (0%)

Query  1    MAVSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKK  60
            MAVS+NV +IPAIKR+GNN+  +  PK+RVAAYCRVSTDS+EQASSYE+QIEHYT++IKK
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  61   NSEWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMVITKSISRFARNTLDCLQYI  120
            N EWE+AGIFADDGI+GTNTK+R+EFNRMI+ECMAGKIDM+ITKSISRFARNTLDCL+YI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  121  RKLKDKNVAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVM  180
            R+LKDKN+AV+FEKENINT+D+KGEIMLTIMASLAQQESQSLSQNVKLG QYRYQQGEV 
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  181  VNCSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLETDGILTGAGKKR  240
            VN  RFLGYTKDENK+LVI PE AE+VKRIYREYLEG+S+ +I +GLE+DGILT+AGK +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  241  WHTSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENNHEAIIPREIFM  300
            W+  T++KIL NEKYIGDALLQKTYTVDFL+KKRV NNGIVPQYYVEN+HE+IIPRE+FM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  301  QVQEELVRRSRGHISTSGKKRNFSSNHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCV  360
            QVQEE+VRR+  +   +GKKR +SS+  +S I++CG+CG+IYRRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  361  SRLENTGLTCHSRTVLEDMIGIATVEAINKLIGQKDGFLTILKENIETVISETGNNVVSe  420
            SRLE+ G  C + T+ E+ +  A V AIN L+++K+ FL+ LK NI TV++E  +N   +
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  421  idkkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFL  480
            I+ KLEELQ++LL  A+SK+DY+D+ADEIYRLRE +++ALAE+A + G +QR+ +M  FL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  481  NEQSTLLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDIE  522
            NEQS  LEEYDEQLVRRLIEK+TV+DDKLT+EFKSGVEIDIE
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

19) Cthe_1671 in NC_009012


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  613 bits (2317),  Expect = 7e-177, Method: Compositional matrix adjust.
 Identities = 367/522 (71%), Positives = 450/522 (87%), Gaps = 1/522 (0%)

Query  1    MAVSKNVTVIPARKHTRKSK-DEEKPKLRVAAYCRVSTDSEEQATSYDTQIEHYTAYIQG  59
            MAVS+NVTVIPA K+  ++K  E KPK+RVAAYCRVSTDSEEQA+SY+ QIEHYT YI+ 
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  60   HPDWMLAGIFADDGISGTNTKKREEFNRMIDECMAGNIDMIITKSISRFARNTLDCLKYI  119
            + +W LAGIFADDGI+GTNTKKREEFNRMI+ECMAG+IDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  120  RQLKDKNIPVYFEKENINTMDSKGEVMLTIMaslaqqesqslsqNVKLGLQYRYQQGEIQ  179
            RQLKDKNI+V+FEKENINTMDSKGE+MLTIMASLAQQESQSLSQNVKLG+QYRYQQGE+Q
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  180  VNCARFLGYTKDENKRLVVVPEEAEIVKRIYREYLEGASMLKIARGLEADGILNGAGNER  239
            VN  RFLGYTKDENK+LV+ PE AE+VKRIYREYLEGAS+L+I+RGLEADGIL +AG+ +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  240  WHTSNINNILRNEKYIGDALLQKTYTVDFLTKKRVKNNGIVPQYYVENSHEAIIPREVFM  299
            W+   +++IL+NEKYIGDALLQKTYTVDFL+KKRVKNNGIVPQYYVENSHE+IIPRE+FM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  300  QVQEELIRRRIVHTSPNGKTRTFSSNHVFAQIIICGKCGEVFRRVHWNNRGKKSIVWRCV  359
            QVQEE++RR  ++    GK R +SS+  ++ I+ CG CG+++RRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  360  SRLENTGLFCDARTVLESTIEQVLVTAINQTLCDKDSFLTTLRDNIATIINRESDKALAD  419
            SRLE+ G  C A T+ E T++  +V AIN+ L +K++FL+TL+ NIAT++N E+D+A  D
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  420  IDKRLEELQTELLKLATSNADYEKVGDEIHSLRDQKQKLQVENANRDELKKQIADMSTFL  479
            I+ +LEELQ +LL  A S+ DYE V+DEI  LR+ KQ+   ENA+R+  +++IA+M+ FL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  480  KKQSTALAEYDKQLVRRLIDKVTVFEDKFTVEFKSGVTVDVD  521
            + QS  L EYD QLVRRLI+KVTVF+DK+TVEFKSGV +D++
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

20) Tph_c23370 in NC_018870


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  612 bits (2313),  Expect = 2e-176, Method: Compositional matrix adjust.
 Identities = 366/522 (71%), Positives = 451/522 (87%), Gaps = 1/522 (0%)

Query  1    MAVSKNVTVIPARKHTRKSK-DEEKPKLRVAAYCRVSTDSEEQATSYDTQIEHYTAYIQG  59
            MAVS+NVTVIPA K+  ++K  E KPK+RVAAYCRVSTDSEEQA+SY+ QIEHYT YI+ 
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  60   HPDWMLAGIFADDGISGTNTKKREEFNRMIDECMAGNIDMIITKSISRFARNTLDCLKYI  119
            + +W LAGIFADDGI+GTNTKKREEFNRMI+ECMAG+IDMIITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  120  RQLKDKNIPVYFEKENINTMDSKGEVMITIMaslaqqesqslsqNVKLGLQYRYQQGEIQ  179
            RQLKDKNI+V+FEKENINTMDSKGE+M+TIMASLAQQESQSLSQNVKLG+QYRYQQGE+Q
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  180  INCARFLGYTKDENKHLVIVPEEAEIVKRIYREYLEGASMLKIARGLEADGILNGAGNER  239
            +N  RFLGYTKDENK+LVI PE AE+VKRIYREYLEGAS+L+I+RGLEADGIL +AG+ +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  240  WHTSNINHILRNEKYIGDALLQKTYTVDFLTKKRVKNNGIVPQYYVENSHEAIIPREIFM  299
            W+   ++ IL+NEKYIGDALLQKTYTVDFL+KKRVKNNGIVPQYYVENSHE+IIPRE+FM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  300  QVQEELIRRRIVHTSPNGKTRTFSSNHVFAQIVICGKCGEVFRRVHWNNRGKKSIVWRCV  359
            QVQEE++RR  ++    GK R +SS+  ++ IV CG CG+++RRVHWNNRG KSIVWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  360  SRLENTGLFCDARTVLESTIEQVLVTAINQTLCDKDSFLTTLRDNIATVINRESDKALAD  419
            SRLE+ G  C A T+ E T++  +V AIN+ L +K++FL+TL+ NIATV+N E+D+A  D
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  420  IDKRLEELQTELLKLATSNADYDKVGDEIHRLRDQKQKLLLENANRDELKKRMADMSTFL  479
            I+ +LEELQ +LL  A S+ DY+ V+DEI RLR+ KQ+ L ENA+R+  ++R+A+M+ FL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  480  KKQSTALAEYDEKLVRRLIEKVSIHEDKFTVEFKSGLTVDVN  521
            + QS  L EYDE+LVRRLIEKV++ +DK+TVEFKSG+ +D++
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

21) HM1_2980 in NC_010337


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  598 bits (2260),  Expect = 2e-172, Method: Compositional matrix adjust.
 Identities = 361/522 (70%), Positives = 451/522 (87%), Gaps = 1/522 (0%)

Query  1    MEVSKNVTVIPARKHIRKSK-DEEKPKLRVAAYCRVSTDSDEQATSYETQIEHYTAYING  59
            M VS+NVTVIPA K++ ++K  E KPK+RVAAYCRVSTDS+EQA+SYE QIEHYT YI+ 
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  60   HPDWVLAGIFADDGISGTNTKKRDEFNRMIDECMAGNIDMVITKSISRFARNTLDCLKYI  119
            + +W LAGIFADDGI+GTNTKKR+EFNRMI+ECMAG+IDM+ITKSISRFARNTLDCLKYI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  120  RQLKEKNIPVYFEKENINTMDSKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGEIQ  179
            RQLK+KNI+V+FEKENINTMDSKGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQGE+Q
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  180  VNCARFLGYTKDENKHLVVVPEEAEVVKRIYREYLEGASMLKIARGLEADGILNGAGKER  239
            VN  RFLGYTKDENK+LV+ PE AEVVKRIYREYLEGAS+L+I+RGLEADGIL +AGK +
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  240  WHTSNINQILRNEKYIGDALLQKTYTVDFLTKKRVKNNGLVPQYYVENSHEAIIPREIFM  299
            W+   +++IL+NEKYIGDALLQKTYTVDFL+KKRVKNNG+VPQYYVENSHE+IIPRE+FM
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  300  QVQEELVRRRLIHKSPNGKNRVFSSSHCLANIVYCGVCGEFYRRIHWYNRGKKSIVWRCI  359
            QVQEE+VRR  ++    GK+RV+SS   L++IVYCG CG++YRR+HW NRG KSIVWRC+
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  360  SRLENTGLFCDARTVPESQIEQVLVKAINQTLCDRDTFLTTLQNNIETVLSHGNDQVLAD  419
            SRLE+ G  C A T+ E  ++  +VKAIN+ L +++ FL+TL++NI TV+++ ND+   D
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  420  IDKRlkelqaellklaTSNADYEKVGNEIYHLREEKQKLQLESAGRDEQKKRISDMGTFL  479
            I+ +L ELQ +LL  A S+ DYE V++EIY+LRE KQ+   E+A R+ +++RI++M  FL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  480  REQPTALTEYDESLIRRLIEKVTVYEDKFTVEFKSGVNVEIN  521
             EQ+  L EYDE L+RRLIEKVTV++DK+TVEFKSGV+++I+
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

22) DET1067 in NC_002936


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  595 bits (2249),  Expect = 2e-171, Method: Compositional matrix adjust.
 Identities = 330/516 (64%), Positives = 430/516 (84%), Gaps = 2/516 (0%)

Query  2    VIPAKRQVGNTVKQSEQKKLRVAAYCRVSTDSDEQESSYEAQVTHYTEYIQKNPDWELAG  61
            VIPA ++VGN      + K+RVAAYCRVSTDS+EQ SSYE Q+ HYT+YI+KN +WELAG
Sbjct  9    VIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAG  68

Query  62   IFADDGISGTNTKKRDEFNRMIDECMSGNIDMIITKSISRFARNTLDCLQYIRQLKDKNI  121
            IFADDGI+GTNTKKR+EFNRMI+ECM+G+IDMIITKSISRFARNTLDCL+YIRQLKDKNI
Sbjct  69   IFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNI  128

Query  122  PVYFEKESINTLDAKGEVLLTIMASLAQQESQSMSENIKLGLQYRYQQGKVQVNHNRFLG  181
            +V+FEKE+INT+D+KGE++LTIMASLAQQESQS+S+N+KLG+QYRYQQG VQVNH+RFLG
Sbjct  129  AVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLG  188

Query  182  YTKDENGNLVIDPEQAEIVKRIYREYLEGSSMDKIASGLMADGILTGAGKEKWHTSTINK  241
            YTKDEN +LVIDPE AE+VKRIYREYLEG+S+ +I+ GL ADGILT+AGK KW+  T++K
Sbjct  189  YTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKK  248

Query  242  ILRNEKYMGDALLQKTYTTDFLTKKRIKNNGTVPQYYVEGDHEAIIPKDLFMQVQAELVR  301
            IL+NEKY+GDALLQKTYT DFL+KKR+KNNG VPQYYVE  HE+IIP++LFMQVQ E+VR
Sbjct  249  ILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVR  308

Query  302  RRVVHVSPTGKKRSFSCNHCFAQMVFCGDCGELYRRVHWNNHGCKSIVWRCISRLEPGSA  361
            R  ++    GKKR +S +  ++ +V+CG+CG++YRRVHWNN+G KSIVWRC+SRLE  ++
Sbjct  309  RANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGS  368

Query  362  DTNCTNRTVNELLLQEVTVTVINQILTERGTFLKQLQANIAKAVVSADTLSPDGIQARLE  421
            +  CT  T+NE  LQ   V  IN++L+++  FL  L+ NIA      +  + D+I+++LE
Sbjct  369  E--CTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGKLE  426

Query  422  ELQKELIKKANNKQDYDAIADEILRLREQKEQSEVDSHHREEAMNRIKELQDFIFKQKTD  481
            ELQ++L+ +A++K+DY+ +ADEI RLRE K+++  ++ +RE   +RI E+ DF+  Q  +
Sbjct  427  ELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQSCE  486

Query  482  ITEFDEALVKKLIEKITVFADHFTVEFKSGITIDIE  517
            + E+DE LV++LIEK+TVF D +TVEFKSG+ IDIE
Sbjct  487  LEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

23) SpiGrapes_2876 in NC_016633


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  581 bits (2196),  Expect = 3e-167, Method: Compositional matrix adjust.
 Identities = 320/522 (62%), Positives = 430/522 (83%), Gaps = 0/522 (0%)

Query  2    ISLASNVTVIPAKKTIGTQKTTDKVQKTRVAAYCRVSTDSDEQETSYETQIEHYTSFINS  61
            ++++ NVTVIPA K +G +KT++   K RVAAYCRVSTDS+EQ +SYE QIEHYT++I+ 
Sbjct  1    MAVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  62   HPDWVLAGIYADDGISGMNTKKRDEFQRMINDCNEGKIDMVITKSISRFARNTVDCLNYT  121
            + +W LAGI+ADDGI+G NTKKR+EF+RMI++C  GKIDM+ITKSISRFARNT+DCL+Y 
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  122  RALKNKNIGVYFEKENINTLDAKGEVLMTIMASLAQQESESLSANVRLGLQFRYQQGKVQ  181
            R LK+KNI+V+FEKENINT+D+KGE+++TIMASLAQQES+SLS NV+LG+Q+RYQQG VQ
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  182  VNHNWFLGYTKDADGHLIIDPEQAEVVKRIYREYLSGKSFLQIKRSLEADGILNGAGNAK  241
            VNH++FLGYTKD + +L+IDPE AEVVKRIYREYL G S+LQI R+LEADGIL +AG+AK
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  242  WHESNIKQILTNEKYIGDALLQKTYTVDILEKKREANKGQVPKYYVEDSHEAIIPKDIFL  301
            W+   +K+IL NEKYIGDALLQKTYTVD+L KKR  N+G VP+YYVE+SHE+IIP+++F+
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  302  KVQEEIARRANLTKGTTKRKRIYSGRYALSGIVFCAHCGDIFRRIKWNNRGCKSTVWRCV  361
            +VQEE+ RRANL      +KR+YS++YALS+IV+C+HCGDI+RR+ WNNRG KS VWRCV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  362  SRVEKDGPDCTARTVHEEFLHEVVIKAINEAFREKKAILPLLRENIESSLEEVTSNQIAA  421
            SR+E  G++CTA T++EE L+  V+KAINE + +K ++L+ L+ NI + ++E   N    
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDD  420

Query  422  IDEQMKSMQQELLATVNSKNTGDELGMEIRRLRDEKQALQNEQASRQDLRTRLDEMMRFL  481
            I+ ++  +QQ+LL   +SKN  ++++ EI RLR+ KQ    E+A R++ R R+ EM  FL
Sbjct  421  IEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFL  480

Query  482  NDLPCELTEYEEDYVRTLLEKITVYDDYFIVEFKSGIEIQID  523
            N+ +CEL EY+E+ VR L+EK+TV+DD + VEFKSG+EI+I+
Sbjct  481  NEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

24) LRC_05140 in NC_015975


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  569 bits (2147),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 325/519 (63%), Positives = 438/519 (85%), Gaps = 2/519 (0%)

Query  3    KVTFIPARRQVGNNIKKQEKPKLRVAAYCRVSTDSDEQETSYETQVSHYKEYIQKNPEWQ  62
            +VT IPA ++VGNN   + KPK+RVAAYCRVSTDS+EQ +SYE Q+ HY +YI+KN EW+
Sbjct  6    NVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWE  65

Query  63   LAGVFADDGISGTNTKKRDEFNRMINECMAGNIDMIITKSISRFARNTLDCLKYVRQLKN  122
            LAG+FADDGI+GTNTKKR+EFNRMI+ECMAG+IDMIITKSISRFARNTLDCLKY+RQLK+
Sbjct  66   LAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKD  125

Query  123  KNIPIYFEKESINTMDAKGEVLITIMaslaqqesqslsqNVKLGLQYRYQQGKVMVNHNH  182
            KNI+++FEKE+INTMD+KGE+++TIMASLAQQESQSLSQNVKLG+QYRYQQG V VNH++
Sbjct  126  KNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKR  185

Query  183  FLGYTKDENGNLVIDPVQAEVVKRIYREYLEGYSMKKICQHLEADGALTGAGNTKWYDST  242
            FLGYTKDEN +LVIDP  AEVVKRIYREYLEG S+ +I + LEADG LT+AG++KW   T
Sbjct  186  FLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPET  245

Query  243  INKILRNEKYMGDALLQKTYTTDFLTKKRVKNTGIVPQYYVENNHEAIIPKDIFMQVQAE  302
            ++KIL+NEKY+GDALLQKTYT DFL+KKRVKN GIVPQYYVEN+HE+IIP+++FMQVQ E
Sbjct  246  LKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEE  305

Query  303  LARRRNVRTGKSGKKRCFSGNNCFSQIVCCGHCGELYRRIHWNNHGKKSIVWRCISRLEP  362
            + RR N+R  K+GKKR +S++  +S IV CGHCG++YRR+HWNN+G KSIVWRC+SRLE 
Sbjct  306  MVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEE  365

Query  363  SFAKENCTNRTVHEETLKEISLKAINQICNDSDSFINQIQENVAKAIVNADSLSPEVIDK  422
                 +CT  T++EETL+   +KAIN++  + ++F++ ++ N+A  + + +  + + I+ 
Sbjct  366  K--GSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  423  RLEELQKELIHKVNNKQEYDAIADEIFRLRDQKQQSLMDAETQKKNLRRVKDIQDFIKDQ  482
            +LEELQ++L+ + ++K++Y+ +ADEI+RLR+ KQ++L +   +  + +R+ ++ DF+++Q
Sbjct  424  KLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQ  483

Query  483  STEITEFDESLVRRLVESITVFNDHFTVEFKSGIKVDIN  521
            S E+ E+DE LVRRL+E +TVF+D +TVEFKSG+ +DI+
Sbjct  484  SCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

25) Clo1100_3560 in NC_016791


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  563 bits (2125),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 333/517 (65%), Positives = 423/517 (82%), Gaps = 0/517 (0%)

Query  4    KNITVIPARKRVGSTAAKEIIKKLRVAAYCRVSTETEEQNSSYEVQVAHYTEFIKKNTEW  63
            +N+TVIPA KRVG+  + E   K+RVAAYCRVST++EEQ SSYE+Q+ HYT++IKKN EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   EFAGIFADDGISGTNTKKREEFNRMIDECMEGKIDLVISKSISRFARNTLDCLKYIRQLK  123
            E+AGIFADDGI+GTNTKKREEFNRMI+ECM GKID++I+KSISRFARNTLDCLKYIRQLK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  EKNISVFFEKENINTMDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQVNHK  183
            +KNI+VFFEKENINTMD+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNHK
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  RFMGYTKDEDGNLIIVPGEAKIIKRIYREYLEGKSLAGIGRDLEKDGILTAAGKPKWRPE  243
            RF+GYTKDE+ +L+I P  A ++KRIYREYLEG SL  I+R+LE DGILTAAGK+KWRPE
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  TLKKILTNEKYIGDALLQKTTTVDFLTKKRVKNEGHLPQYYVENNHDAIIPKELFLQAQE  303
            TLKKIL NEKYIGDALLQKT TVDFL+KKRVKN+G +PQYYVEN+H++IIP+ELF+Q QE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  ELHRRNNIYTGEDKNKRIYSSKYALSSITFCGDCGDIYRRVYWNIHGRKEIVWRCVTRIE  363
            E+ RR N+    + +KR+YSSKYALSSI +CG+CGDIYRRV WN +G K IVWRCV+R+E
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  364  QGPEVCKSRTVKEGDLYDAVMTAINRLLAGGDNMIKTLEENIHAVIGDATEYQISEINTL  423
            +    C + T++E  L  AV+ AIN LLA  +  + TL  NI +V+ +  +    +I+  
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGK  424

Query  424  LEEKQKELISLANKGKDYEPLADEIDNLREKRQNLLVEDASLSGENERINELIEFIRNNK  483
            LEE Q++L+  A+  +DYE +ADEI  LRE +QN L E+A   G  +RI E+ +F+ ++ 
Sbjct  425  LEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQS  484

Query  484  YRTQRYDDALVRKLIQNVTVYNDHFVICFKSGIEVEV  520
               + YD+ LVR+LI++VTV++D + + FKSG+E+++
Sbjct  485  CELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

26) SSU05_0953 in NC_009442


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  559 bits (2110),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 330/517 (64%), Positives = 424/517 (83%), Gaps = 0/517 (0%)

Query  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63
            +N+ VIPA KRVG+  + E   K+RVAAYCRVST++EEQ SSYE+Q+ HYT++IKKN+EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123
            E+AGIFADDGI+GTNTKKR+EFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIRQLK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  DKNISVYFEKENINTTDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQVNHK  183
            DKNI+V+FEKENINT D+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNHK
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243
            RF+GYTKDE+ +L I PE AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++WRPE
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303
            ++KKILQNEKYIGDALLQKT TVDFL+KKRVKN+G VPQYYVENSHE+IIP+ELF+Q QE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363
            E+ RR+N+    G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+R+E
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423
            +    C   T++E+ L  AV+ AIN LLA  +  + TL  NI +V+ E  +    +I+  
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGK  424

Query  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483
            LEE Q++L+  A+  +DY+++ADEI  LR+ +Q  L E+A   G  +RI E+ +F+  + 
Sbjct  425  LEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQS  484

Query  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520
                EYD++LVR++I+ VTV+++ + + FKSG+E++I
Sbjct  485  CELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

27) SSU98_0960 in NC_009443


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  559 bits (2110),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 330/517 (64%), Positives = 424/517 (83%), Gaps = 0/517 (0%)

Query  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63
            +N+ VIPA KRVG+  + E   K+RVAAYCRVST++EEQ SSYE+Q+ HYT++IKKN+EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123
            E+AGIFADDGI+GTNTKKR+EFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIRQLK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  DKNISVYFEKENINTTDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQVNHK  183
            DKNI+V+FEKENINT D+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNHK
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243
            RF+GYTKDE+ +L I PE AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++WRPE
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303
            ++KKILQNEKYIGDALLQKT TVDFL+KKRVKN+G VPQYYVENSHE+IIP+ELF+Q QE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363
            E+ RR+N+    G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+R+E
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423
            +    C   T++E+ L  AV+ AIN LLA  +  + TL  NI +V+ E  +    +I+  
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGK  424

Query  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483
            LEE Q++L+  A+  +DY+++ADEI  LR+ +Q  L E+A   G  +RI E+ +F+  + 
Sbjct  425  LEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQS  484

Query  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520
                EYD++LVR++I+ VTV+++ + + FKSG+E++I
Sbjct  485  CELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

28) SSUSC84_0859 in NC_012924


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  559 bits (2110),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 330/517 (64%), Positives = 424/517 (83%), Gaps = 0/517 (0%)

Query  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63
            +N+ VIPA KRVG+  + E   K+RVAAYCRVST++EEQ SSYE+Q+ HYT++IKKN+EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123
            E+AGIFADDGI+GTNTKKR+EFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIRQLK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  DKNISVYFEKENINTTDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQVNHK  183
            DKNI+V+FEKENINT D+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNHK
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243
            RF+GYTKDE+ +L I PE AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++WRPE
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303
            ++KKILQNEKYIGDALLQKT TVDFL+KKRVKN+G VPQYYVENSHE+IIP+ELF+Q QE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363
            E+ RR+N+    G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+R+E
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423
            +    C   T++E+ L  AV+ AIN LLA  +  + TL  NI +V+ E  +    +I+  
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGK  424

Query  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483
            LEE Q++L+  A+  +DY+++ADEI  LR+ +Q  L E+A   G  +RI E+ +F+  + 
Sbjct  425  LEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQS  484

Query  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520
                EYD++LVR++I+ VTV+++ + + FKSG+E++I
Sbjct  485  CELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

29) Amet_4005 in NC_009633


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  554 bits (2092),  Expect = 5e-159, Method: Compositional matrix adjust.
 Identities = 332/518 (65%), Positives = 425/518 (83%), Gaps = 0/518 (0%)

Query  3    GKNITVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNLSYEVQVAHYTEYIKKNTE  62
            ++N+TVIPA KRVG+  + E   K+RVAAYCRVST++EEQ  SYE+Q+ HYT+YIKKN E
Sbjct  4    SRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKE  63

Query  63   WEFAGIFADDGISGTNTKKREEFNRMIEECMEGNIDLVITKSISRFARNTLDCLKYIRQL  122
            WE+AGIFADDGI+GTNTKKREEFNRMIEECM G+ID++ITKSISRFARNTLDCLKYIRQL
Sbjct  64   WELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQL  123

Query  123  KEKNIAVYFEKENINTMDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQVNH  182
            K+KNIAV+FEKENINTMD+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNH
Sbjct  124  KDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNH  183

Query  183  NRFMGYTKDEEGNLIIVPEEAEIIKRIYREYLEGKSLVGIGRDLEKDGILTAAGKPRWRP  242
            +RF+GYTKDE+ +L+I PE AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++WRP
Sbjct  184  KRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRP  243

Query  243  ETIKKILLNEKYIGDALLQKTFTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302
            ET+KKIL NEKYIGDALLQKT+TVDFL+KKRVKN+G VPQYYVENSHE+IIP+ELF+Q Q
Sbjct  244  ETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQ  303

Query  303  EELHRRSNIYTGADKNKRIYSSKYALSTITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRI  362
            EE+ RR+N+    + +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+R+
Sbjct  304  EEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRL  363

Query  363  EQGPEVCKNRTVKETELYDAVMTAINRLLAGGDNMIRILEENIYAVIGDTTEYKISEINT  422
            E+    C   T++E  L  AV+ AIN LLA  +  +  L  NI +V+ +  +    +I+ 
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  423  LLEEKQKEVINLANKGKDYDFLADEIDKLREKRQTLLVEDASLSGENERINELIDFIRNN  482
             LEE Q++++  A+  +DY+ +ADEI +LRE +Q  L E+A   G  +RI E+ DF+ ++
Sbjct  424  KLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQ  483

Query  483  KYRTLLYDDTLVRKIIQNVTVYDDHFVICFKSGIEIEV  520
                  YD+ LVR++I++VTV+DD + + FKSG+EI++
Sbjct  484  SCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

30) Desdi_1292 in NC_019903


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  554 bits (2090),  Expect = 7e-159, Method: Compositional matrix adjust.
 Identities = 326/517 (64%), Positives = 423/517 (82%), Gaps = 0/517 (0%)

Query  4    KNITVIPARKRVGSTAAKEKVKKLRVAAYCRVSTETEEQNSSYEVQVAHYTEFIKKNAEW  63
            +N+TVIPA KRVG+  + E   K+RVAAYCRVST++EEQ SSYE+Q+ HYT++IKKN EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   EFAGIFADDGISGTNTKKREEFNRMIDGCMEGNIDLVITKSISRFARNTLDCLKYIRQLK  123
            E+AGIFADDGI+GTNTKKREEFNRMI+ CM G+ID++ITKSISRFARNTLDCLKYIRQLK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  DKNISVFFEKENINTMDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQVNHN  183
            DKNI+VFFEKENINTMD+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNH+
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  RFMGYTKDDEGNLIIVPEEAEIIKRIYREYLEGKSLAGIGRDLEKDDILTAAGKPRWRPE  243
            RF+GYTKD++ +L+I PE AE++KRIYREYLEG SL  I+R+LE D+ILTAAGK++WRPE
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  TIKKILMNEKYIGDALLQKTFTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303
            T+KKIL NEKYIGDALLQKT+TVDFL+KKRVKN+G VPQYYVENSHE+IIP+ELF+Q QE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  ELHRRNNIYTGADKNKRLYSSKYALSTITFCGDCGDIYRRVYWNIRGRKEFVWRCVTRIE  363
            E+ RR N+    + +KR+YSSKYALS+I +CG+CGDIYRRV WN RG K +VWRCV+R+E
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  364  QGPETCKNRTVKEGDLYDAVMTAINKLLAGGDNMMRTLEENIHAIIGDTTEYRISEINTL  423
            +    C   T++E  L  AV+ AIN LLA  +  + TL  NI +++ +  +    +I+  
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGK  424

Query  424  LEEKQKEIISLANNGKDFEFLSEEVDKLREERQRLLVEDASLSGENERINELIGFICRNK  483
            LEE Q++++  A++ +D+E +++E+ +LRE +Q  L E+A   G  +RI E+ +F+  + 
Sbjct  425  LEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQS  484

Query  484  YRTLLYDDTLVRKLIQNVTVYEDHFVISFKSGIEIEV  520
                 YD+ LVR+LI++VTV++D + + FKSG+EI++
Sbjct  485  CELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

31) MELS_2017 in NC_015873


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  539 bits (2036),  Expect = 1e-154, Method: Compositional matrix adjust.
 Identities = 310/519 (60%), Positives = 435/519 (84%), Gaps = 2/519 (0%)

Query  2    KKVMIIPARKRMGNIEKEPEQKKLRVAAYCRVSTDSDEQETSYETQVSHYKEFISSHPDW  61
            ++V +IPA KR+GN      + K+RVAAYCRVSTDS+EQ +SYE Q+ HY ++I  + +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  62   VLAGIFADDGISGTNTKKRNEFNRMIQECMAGNIDMIITKSISRFARNTLDCLKYIRQLK  121
             LAGIFADDGI+GTNTKKR+EFNRMI+ECMAG+IDMIITKSISRFARNTLDCLKYIRQLK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  122  EKNIPVLFEKESINTMDAKGEVLITIMaslaqqeseslsqNVKLGLQYRYQQGKVQVNHK  181
            +KNI+V+FEKE+INTMD+KGE+++TIMASLAQQES+SLSQNVKLG+QYRYQQG VQVNHK
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  182  HFLGYTKDENGHLIIDPEQAEVVKRIYREYLEGYSMKKIGKHLEADGILTGAGRKKWHDS  241
            +FLGYTKDEN +L+IDPE AEVVKRIYREYLEG S+ +I++ LEADGILT+AG+ KW+  
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  242  TINKILRNEKYMGDALLQKTYTVDFLTKKRVKNNGFVPQYYVENDHEAIIPKDIFLQVQA  301
            T++KIL+NEKY+GDALLQKTYTVDFL+KKRVKNNG+VPQYYVEN HE+IIP+++F+QVQ 
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  302  ELVRRRIVHISPSGQRHSFSSNNCFAQITYCGVCGELYRRVHWNNRGHKSIVWRCISRLD  361
            E+VRR  ++   +G+++ +SS+  ++ I YCG CG++YRRVHWNNRG KSIVWRC+SRL+
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  362  PRGAEINCTNRTVNENLLKEITMKAMNHILSDSHTFLLQMQKNITKTIIKNDTLSPECIQ  421
             +G+E  CT  T+NE+ L+   +KA+N++L++ + FL  ++KNI+  +  ++  + + I+
Sbjct  365  EKGSE--CTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIE  422

Query  422  KRLDELQQELIQHATNRQNYNAIANEIFRLREQQEEAEQNNLSQQANIKRLEDLKKFIRE  481
             +L+ELQQ+L+ +A ++++Y+ +A+EI+RLRE +++A  +N  ++++ +R+ ++  F+ E
Sbjct  423  GKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNE  482

Query  482  HPTQITEFNeitirkiiekitiFPDHFLVKFKSGIEVTV  520
            ++ ++ E++E  +R++IEK+T+F D + V FKSG+E+ +
Sbjct  483  QSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

32) SCI_1214 in NC_022238


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  508 bits (1918),  Expect = 2e-145, Method: Compositional matrix adjust.
 Identities = 310/518 (60%), Positives = 409/518 (79%), Gaps = 2/518 (0%)

Query  4    NVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNKEW  63
            NVT+IPA  R GN  T  E+KPK+RVAAYCRVSTDS+EQA+SY++Q+ HYT+YI +NKEW
Sbjct  6    NVTVIPAIKRVGNNKTS-ESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   ELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRKLK  123
            ELAGI+ADDGI+GTN KKRE F  MI++CM GK+DMIITKSISRFARNT+DCLKY+R+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  EKNIAIIFEKENINTLEASGELLLTIMaslaqqesaslsqNIKLGLQFRYQEGKVQPNHE  183
            +KNIA++FEKENINT+++ GE++LTIMASLAQQES SLSQN+KLG+Q+RYQ+G VQ NH 
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  HFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWHLS  243
            +FLGYTKDE+ +L++D + A +V+RI+REYLEGAS+ +I+ GLE D I T++ + KW+  
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  TIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLVQE  303
            T++ IL+NEKY+GDALLQKT T DF+ K R+KN+G VPQYYV +S+EPII+R++FM VQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  EMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCTRV  363
            EM+RRANL  G  G KKRVYSSKYALSSI  C  CGDIYRR+ WNNRG KS VWRC +R+
Sbjct  305  EMVRRANL-RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRL  363

Query  364  EHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKLNG  423
            E+  S C A TI+E  LQ A VKAIN +L   +  L  L  NI   + ++N    + ++G
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  424  ILKGKQKELVKLAHAKKDYTALADEIDILRDKKKELQVQRAETEGVKKRIEELTDFLKGE  483
             L   Q++L+  A +K+DY  +ADEI  LR+ K++   + AE EG ++RI E+TDFL+ +
Sbjct  424  KLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQ  483

Query  484  NHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEV  521
            + +L EYDE +VR+ IE + V++DK+T+ FK+ VEI++
Sbjct  484  SCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

33) SCRE_1155 in NC_022236


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  508 bits (1918),  Expect = 2e-145, Method: Compositional matrix adjust.
 Identities = 310/518 (60%), Positives = 409/518 (79%), Gaps = 2/518 (0%)

Query  4    NVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNKEW  63
            NVT+IPA  R GN  T  E+KPK+RVAAYCRVSTDS+EQA+SY++Q+ HYT+YI +NKEW
Sbjct  6    NVTVIPAIKRVGNNKTS-ESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   ELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRKLK  123
            ELAGI+ADDGI+GTN KKRE F  MI++CM GK+DMIITKSISRFARNT+DCLKY+R+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  EKNIAIIFEKENINTLEASGELLLTIMaslaqqesaslsqNIKLGLQFRYQEGKVQPNHE  183
            +KNIA++FEKENINT+++ GE++LTIMASLAQQES SLSQN+KLG+Q+RYQ+G VQ NH 
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  HFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWHLS  243
            +FLGYTKDE+ +L++D + A +V+RI+REYLEGAS+ +I+ GLE D I T++ + KW+  
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  TIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLVQE  303
            T++ IL+NEKY+GDALLQKT T DF+ K R+KN+G VPQYYV +S+EPII+R++FM VQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  EMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCTRV  363
            EM+RRANL  G  G KKRVYSSKYALSSI  C  CGDIYRR+ WNNRG KS VWRC +R+
Sbjct  305  EMVRRANL-RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRL  363

Query  364  EHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKLNG  423
            E+  S C A TI+E  LQ A VKAIN +L   +  L  L  NI   + ++N    + ++G
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  424  ILKGKQKELVKLAHAKKDYTALADEIDILRDKKKELQVQRAETEGVKKRIEELTDFLKGE  483
             L   Q++L+  A +K+DY  +ADEI  LR+ K++   + AE EG ++RI E+TDFL+ +
Sbjct  424  KLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQ  483

Query  484  NHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEV  521
            + +L EYDE +VR+ IE + V++DK+T+ FK+ VEI++
Sbjct  484  SCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

34) SCR2_1155 in NC_022245


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  508 bits (1918),  Expect = 2e-145, Method: Compositional matrix adjust.
 Identities = 310/518 (60%), Positives = 409/518 (79%), Gaps = 2/518 (0%)

Query  4    NVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNKEW  63
            NVT+IPA  R GN  T  E+KPK+RVAAYCRVSTDS+EQA+SY++Q+ HYT+YI +NKEW
Sbjct  6    NVTVIPAIKRVGNNKTS-ESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  64   ELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRKLK  123
            ELAGI+ADDGI+GTN KKRE F  MI++CM GK+DMIITKSISRFARNT+DCLKY+R+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  124  EKNIAIIFEKENINTLEASGELLLTIMaslaqqesaslsqNIKLGLQFRYQEGKVQPNHE  183
            +KNIA++FEKENINT+++ GE++LTIMASLAQQES SLSQN+KLG+Q+RYQ+G VQ NH 
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  184  HFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWHLS  243
            +FLGYTKDE+ +L++D + A +V+RI+REYLEGAS+ +I+ GLE D I T++ + KW+  
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  244  TIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLVQE  303
            T++ IL+NEKY+GDALLQKT T DF+ K R+KN+G VPQYYV +S+EPII+R++FM VQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  304  EMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCTRV  363
            EM+RRANL  G  G KKRVYSSKYALSSI  C  CGDIYRR+ WNNRG KS VWRC +R+
Sbjct  305  EMVRRANL-RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRL  363

Query  364  EHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKLNG  423
            E+  S C A TI+E  LQ A VKAIN +L   +  L  L  NI   + ++N    + ++G
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  424  ILKGKQKELVKLAHAKKDYTALADEIDILRDKKKELQVQRAETEGVKKRIEELTDFLKGE  483
             L   Q++L+  A +K+DY  +ADEI  LR+ K++   + AE EG ++RI E+TDFL+ +
Sbjct  424  KLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQ  483

Query  484  NHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEV  521
            + +L EYDE +VR+ IE + V++DK+T+ FK+ VEI++
Sbjct  484  SCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521

35) M643_03560 in NC_021826


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  500 bits (1885),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 293/522 (57%), Positives = 411/522 (79%), Gaps = 8/522 (1%)

Query  2    AGKKVTVIPMKPRQWAAENTEEKPKLKVAAYCRVSTEMEEQASSYEAQVQHYTDYIQRNP  61
             +++VTVIP   R      +E KPK++VAAYCRVST+ EEQASSYE Q++HYT+YI++N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  62   DWELAGIFADEGISGTGTKKRDGFNRMIEACQKGDVEYIITKSISRFARNTVDCLQYIRQ  121
            +WELAGIFAD+GI+GT TKKR+ FNRMIE C  G ++ IITKSISRFARNT+DCL+YIRQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  122  LKDLHIAVFFEKENINTMDAKGEVLLTIMaslaqqesqslsqNTKMGVQYRFQQGQLRIN  181
            LKD +IAVFFEKENINTMD+KGE++LTIMASLAQQESQSLSQN K+G+QYR+QQG++++N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  182  HNHFLGYTKDEDGNLVIEPKEAEVIKRIFREYLEGSSLQEIANGLMSDGILTGGKRKLWR  241
            H++FLGYTKDE+ +LVI+P  AEV+KRI+REYLEG+SL +I+ GL +DGILT++ +  WR
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  GEGVRLILRNEKYMGDALLQKTYTTDFLTKKRVKNDGSYAQQYYVENSHPAIIPRDIFMQ  301
             E ++ IL+NEKY+GDALLQKTYT DFL+KKRVKN+G    QYYVENSH +IIPR++FMQ
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGI-VPQYYVENSHEPIIPRELFMQ  301

Query  302  VQQELDRRKSMKNKHS---QCFSGKYALSGITVCGDCGNAYRRVHWKNRG---TVWRCKS  355
            VQ+E+ RR +++ + +   + +S+KYALS+I  CG+CG+ YRRVHW+NRG    VWRC S
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361

Query  356  RVDKREHNCSGRTIYEKDLHEAIIKAINETVVDREDFLQQLSENINSVLTDGLTGRleel  415
            R++ +  +C++ TI E  L+ A++KAINE + ++E FL  L  NI +V+ +      +++
Sbjct  362  RLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDI  421

Query  416  dsklkeleseIISMAIGGQGYDELASQIFSLRDERDAVAKQIAANTNLQQRVDEMVVFVK  475
            ++KL EL+ +++  A + ++Y+++A +I+ LR+ ++    + A     +QR+ EM  F++
Sbjct  422  EGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLN  481

Query  476  EHD-VINEYSEVLVRRLIEKVTIFEKNIVVDFKSGVRVTVEI  516
            E+   ++EY E LVRRLIEKVT+F+ ++ V+FKSGV + +EI
Sbjct  482  EQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

36) Csac_0475 in NC_009437


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  497 bits (1873),  Expect = 8e-142, Method: Compositional matrix adjust.
 Identities = 296/430 (69%), Positives = 380/430 (89%), Gaps = 0/430 (0%)

Query  1    MQGKIDMIITKSISRFARNTLDCLKYIRQLKEKNIPVYFEKENINTLDSKGEILLTIMas  60
            M GKIDMIITKSISRFARNTLDCLKYIRQLK+KNI+V+FEKENINT+DSKGEI+LTIMAS
Sbjct  94   MAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLTIMAS  153

Query  61   laqqesqslsqNVKLGIQYRYQQGKIHINHNRFLGYTKDKDGNLVIVPEEAEIVKRIYRE  120
            LAQQESQSLSQNVKLGIQYRYQQG +++NH+RFLGYTKD + +LVI PE AE+VKRIYRE
Sbjct  154  LAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKRIYRE  213

Query  121  YLEGSSMLQIARGLKADGILTGAGNHRWHTSTINKILRNEKYIGDALLQKTYTVDFLSKK  180
            YLEG+S+LQI+RGL ADGILT+AG+ +W+  T++KIL+NEKYIGDALLQKTYTVDFLSKK
Sbjct  214  YLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVDFLSKK  273

Query  181  RVPNNGIVPQYYVENSHEPIIPREIYMQVQEQLVKRRCVHISKNGKKRNYSNNHPLSQIV  240
            RV NNGIVPQYYVENSHEPIIPRE++MQVQE++V+R  ++  K GKKR YS++ +LS IV
Sbjct  274  RVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVYSSKYALSSIV  333

Query  241  FCGNCHEIFRRVHWNNRGKKSIVWRCVSRLENTGLFCTASTILEDTLKEKIVEAINVAVS  300
            +CG+C +I+RRVHWNNRG KSIVWRCVSRLE+ G  CTA+TI E+TL+  +V AIN  ++
Sbjct  334  YCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECTAPTINEETLQTAVVKAINELLA  393

Query  301  GKNSFLAILKKNIETVLSVDLDETTADIDKRleelqaeliqlaNSKEAYDNIVNEIYRLR  360
             K++FL+ LKKNI TV++ + D++T DI+ +LEELQ +L+  A+SK+ Y+++ +EIYRLR
Sbjct  394  NKEPFLSTLKKNIATVFNEENDNATDDIEGKLEELQQQLLIQAKSKNDYEDVADEIYRLR  453

Query  361  DLRQETLSRNALRQDKRDRIAEMTDFLNTQTGDITEFDDKLVRKLVEKAIVYDDRLVVEF  420
            +L+Q++L+ NA R++KR+RIAEMTDFLN Q+ ++ E+D++LVR+L+EK  V+DD+L VEF
Sbjct  454  ELKQNALAENAEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEF  513

Query  421  KSGLEIEVNL  430
            KSG+EI++++
Sbjct  514  KSGVEIDIEI  523

37) HM1_0629 in NC_010337


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  496 bits (1872),  Expect = 8e-142, Method: Compositional matrix adjust.
 Identities = 287/435 (66%), Positives = 373/435 (86%), Gaps = 0/435 (0%)

Query  1    MIEECMAGKIDMVITKSISRFARNTLNCLKYIRQLKDKGIPVFFEKENINTMDSKGEVML  60
            MIEECMAGKIDM+ITKSISRFARNTL+CLKYIRQLKDK I+VFFEKENINTMDSKGE+ML
Sbjct  89   MIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIML  148

Query  61   TIMaslaqqeseslsqNVKLGIQYRYQQGEIQVNHTRFLGYTKDANKQLVVVPEEAEIVK  120
            TIMASLAQQES+SLSQNVKLGIQYRYQQGE+QVNH RFLGYTKD NKQLV+ PE AE+VK
Sbjct  149  TIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVK  208

Query  121  RIFREFLEGSSLLQIGKGLEADGILTAAGKPKWRPETIRKILKNEKYMEDAPLQKTYTVD  180
            RI+RE+LEG+SLLQI++GLEADGILTAAGK+KWRPET++KIL+NEKY+ DA LQKTYTVD
Sbjct  209  RIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVD  268

Query  181  CLTKKRVINNGIVPQYYVENSHEAIIPREIYMQVQEELARRAKPFTDVGGKMRCYSCKYA  240
             L+KKRV NNGIVPQYYVENSHE+IIPRE++MQVQEE+ RRA+     GGK R YS KYA
Sbjct  269  FLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVYSSKYA  328

Query  241  LSSIVFCGDCGELYRRITWYYGNRPTVVWRCVRKIECRTPECHSQSVKEADLKRGVVKAI  300
            LSSIV+CG+CG++YRR+ W      ++VWRCV ++E + +EC + +++E  L+ +VVKAI
Sbjct  329  LSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECTAPTINEETLQTAVVKAI  388

Query  301  NKLVLGKEEFISAMRKNVEAVIGGGAGQGVDEIEEKLAQLQDELVRLASGGQNYEAVVEE  360
            N L+  KE F+S+++KN+ +V+    +++ D+IE KL +LQ++L+  A + ++YE V +E
Sbjct  389  NELLANKEPFLSTLKKNIATVFNEENDNATDDIEGKLEELQQQLLIQAKSKNDYEDVADE  448

Query  361  IYRLREIKGKILSGSADIHGKRRSVAEMEEFLNSQSGIFFEFDDKLVRRIVNRVTVYDGR  420
            IYRLRE+K + L+ +A+ +GKR+ +AEM +FLN QS  + E+D++LVRR++++VTV+D++
Sbjct  449  IYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDK  508

Query  421  LTVEFKTGTEVNVEL  435
            LTVEFK+G E+++E+
Sbjct  509  LTVEFKSGVEIDIEI  523

38) LMOSLCC2755_1716 in NC_018587


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  494 bits (1861),  Expect = 8e-141, Method: Compositional matrix adjust.
 Identities = 287/504 (57%), Positives = 402/504 (80%), Gaps = 8/504 (1%)

Query  10   NTEEKPKLKVAAYCRVSTEMEEQASSYEAQVQHYTDYIQRNPDWELAGIFADEGISGTGT  69
             +E KPK++VAAYCRVST+ EEQASSYE Q++HYT+YI++N +WELAGIFAD+GI+GT T
Sbjct  21   TSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNT  80

Query  70   KKRDGFNRMIEACQKGDVEYIITKSISRFARNTVDCLQYIRQLKDLHIAVFFEKENINTM  129
            KKR+ FNRMIE C  G ++ IITKSISRFARNT+DCL+YIRQLKD +IAVFFEKENINTM
Sbjct  81   KKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTM  140

Query  130  DAKGEVLLTIMaslaqqesqslsqNTKMGVQYRFQQGQLRINHNHFLGYTKDEDGNLVIE  189
            D+KGE++LTIMASLAQQESQSLSQN K+G+QYR+QQG++++NH++FLGYTKDE+ +LVI+
Sbjct  141  DSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVID  200

Query  190  PKEAEVIKRIFREYLEGSSLQEIANGLMSDGILTGGKRKLWRGEGVRLILRNEKYMGDAL  249
            P  AEV+KRI+REYLEG+SL +I+ GL +DGILT++ +  WR E ++ IL+NEKY+GDAL
Sbjct  201  PEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDAL  260

Query  250  LQKTYTTDFLTKKRVKNDGSYAQQYYVENSHPAIIPRDIFMQVQQELDRRKSMKNKHS--  307
            LQKTYT DFL+KKRVKN+G    QYYVENSH +IIPR++FMQVQ+E+ RR +++ + +  
Sbjct  261  LQKTYTVDFLSKKRVKNNGI-VPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGK  319

Query  308  -QCFSGKYALSGITVCGDCGNAYRRVHWKNRG---TVWRCKSRVDKREHNCSGRTIYEKD  363
             + +S+KYALS+I  CG+CG+ YRRVHW+NRG    VWRC SR++ +  +C++ TI E  
Sbjct  320  KRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECTAPTINEET  379

Query  364  LHEAIIKAINETVVDREDFLQQLSENINSVLTDGLTGRleeldsklkeleseIISMAIGG  423
            L+ A++KAINE + ++E FL  L  NI +V+ +      +++++KL EL+ +++  A + 
Sbjct  380  LQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGKLEELQQQLLIQAKSK  439

Query  424  QGYDELASQIFSLRDERDAVAKQIAANTNLQQRVDEMVVFVKEHD-VINEYSEVLVRRLI  482
            ++Y+++A +I+ LR+ ++    + A     +QR+ EM  F++E+   ++EY E LVRRLI
Sbjct  440  NDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLI  499

Query  483  EKVTIFEKNIVVDFKSGVRVTVEI  506
            EKVT+F+ ++ V+FKSGV + +EI
Sbjct  500  EKVTVFDDKLTVEFKSGVEIDIEI  523

39) LJP_1443 in NC_017477


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  442 bits (1663),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 275/523 (53%), Positives = 388/523 (75%), Gaps = 7/523 (1%)

Query  3    KVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVAHYKELIQKE  62
            +V +IPA ++ GN+  ++ +     ++RVAAYCRVSTD +EQASSYE Q+ HY + I+K+
Sbjct  6    NVTVIPAIKRVGNNKTSESKP----KIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  63   PTWEFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIR  122
              WE+AGI+ADDGI+GTNTKKRE+FN+MI  C AGKID+I+TKSISRFARNT+DCLKYIR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  123  DLKAINVAIFFEKENINTMDAKGEVLITIMaslaqqeseslsqNVKMGIQYRYQQGKVFV  182
            +LK  N+A+FFEKENINTMD+KGE+++TIMASLAQQES+SLSQNVK+GIQYRYQQG V V
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  183  NHNHFLGYTKDDQGNLVIEPEEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTKNW  242
            NH++FLGYTKD++ +LVI+PE A V+KRI+  YL+G S+ QI+ +L ADGILT++   +W
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  243  QSSGVSKILKNEKYMGDALLQKTYTIDFLSKKRVKNNGIMPQYYVENDHPAIIPKPVFMQ  302
            ++  + KIL+NEKY+GDALLQKTYT+DFLSKKRVKNNGI+PQYYVEN H +IIP+ +FMQ
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  303  VQQLIKQRQNGITTKNGKHRRLNGKYCFSQIVFCGKCGDIFQRNMW-YRPEKVAVWRCAS  361
            VQ+ + +R N    K GK R  ++KY +S IV+CG CGDI++R  W  R  K  VWRC S
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361

Query  362  RIKRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELAGKQIKANIMKVIKNSKGPTLD  421
            R+     G  C    ++E  L+ A V A+N+L+   E     +K NI  V+++ ++ + D
Sbjct  362  RL--EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATD  419

Query  422  QLDKQLEEAQMQLIQAANQHQNCDVLTQQIMDLRKQRAKVQSREAKQQAKLHSIDEINKL  481
            +++ +LEE Q QL+  A+  ++ + ++++I  LR  + +  + +A +++K + I E+  +
Sbjct  420  DIEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDF  479

Query  482  IEFHKYGLVDFDEGLVRRLVEKITIFKRYMEFKFKDGEVIRIN  524
            ++ +   L ++DE LVRRL+EK+T+F   +   FK G  I I+
Sbjct  480  LNEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIE  522

40) HMPREF0538_20498 in NC_015697


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  441 bits (1661),  Expect = 5e-125, Method: Compositional matrix adjust.
 Identities = 271/524 (52%), Positives = 390/524 (75%), Gaps = 7/524 (1%)

Query  3    KVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVIHYKELIQKE  62
            +V +IPA ++ GN+  ++ +     ++RVAAYCRVSTD +EQASSYE Q+ HY + I+K+
Sbjct  6    NVTVIPAIKRVGNNKTSESKP----KIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  63   PTWKFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIR  122
              W +AGI+ADDGI+GTNTKKRE+FN+MI  C AGKID+I+TKSISRFARNT+DCLKYIR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  123  DLKAINVAIFFEKENINTMDAKGEVLITIMaslaqqeseslsqNVKMGIQYRYQQGKVFV  182
            +LK  N+A+FFEKENINTMD+KGE+++TIMASLAQQES+SLSQNVK+GIQYRYQQG V V
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  183  NHNHFLGYTKDAQGNLVIEPAEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTKNW  242
            NH++FLGYTKD + +LVI+P  A V+KRI+  YL+G S+ QI+ +L ADGILT++   +W
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  243  RSSSVAKILKNEKYMGDALLQKTYTVDFLNKKRVKNEGIMPQYYVENDHPAIIPKSVFMQ  302
            R+ ++ KIL+NEKY+GDALLQKTYTVDFL+KKRVKN+GI+PQYYVEN H +IIP+ +FMQ
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  303  VQQLIKQRRNGITTKNGKHRRLNGKYCFSQIVFCGKCGDIFQRNMWYRPE-KVAVWRCAS  361
            VQ+ + +R N    K GK R  ++KY +S IV+CG CGDI++R  W     K  VWRC S
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361

Query  362  RVRRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELASKQIKANIMQVIKDSQGPTLD  421
            R+     G  C    ++E  L+ A V A+N+L+   E     +K NI  V+++ ++ + D
Sbjct  362  RL--EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATD  419

Query  422  QLDKQLEEVQMKLIQAANQHQDCNALTQQIMDLRKQKEKVQSRETNQQVKLHSLEEINEL  481
            +++ +LEE+Q +L+  A+  +D + ++++I  LR  K++  + +++++ K + + E+ ++
Sbjct  420  DIEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDF  479

Query  482  VEFHKYGLVDFDEGLVRRLIEKITIYQRYMEFTFKDGEVIRINM  525
            ++ +   L ++DE LVRRLIEK+T+++  +   FK G  I I++
Sbjct  480  LNEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

41) Ccel_2729 in NC_011898


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  438 bits (1651),  Expect = 4e-124, Method: Compositional matrix adjust.
 Identities = 262/510 (52%), Positives = 375/510 (74%), Gaps = 16/510 (3%)

Query  3    GARRTVSVIPADPTYNIHSRTEE-IKLRVAAYCRVSTELEEQQSSYQAQVDHYTRAIQTN  61
            +  R V+VIPA      +  +E   K+RVAAYCRVST+ EEQ SSY+ Q++HYT  I+ N
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  62   PKWIFAGIYADEGISGTNTKKRVEFNRMIEDCMAGRIDMIITKSISRFARNTLDCISYIR  121
              W +AGI+AD+GI+GTNTKKR EFNRMIE+CMAG+IDMIITKSISRFARNTLDC+ YIR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  122  QLREKNIAVYFEKENINTLDGAGELLITILGSLAQEESRSLSTNTRWGVVHRFQQGKIYV  181
            QL++KNIAV+FEKENINT+D+ GE+++TI++SLAQ+ES+SLS N + G+  R+QQG + V
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  182  NHNKFLGYTKNENGDLVIVPEEAALVKRIFRQYLEGESIINIKKGLEEEGITTVTGRQKW  241
            NH++FLGYTK+EN +LVI PE A +VKRI+R+YLEG S+++I +GLE +GI T +G+ KW
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  242  STSVIDKMLSNEKYMGDALLQKTYTVDYLTKKRVKNNGIVPQYYVEDSHEAIIPKPLFYR  301
                + K+L NEKY+GDALLQKTYTVD+L+KKRVKNNGIVPQYYVE+SHE+IIP+ LF +
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  302  VQEEKARRAELHKGKAGTSK-YSSQFALTEILICAECGSHYRRTTWAKNGKKKIVWRCIN  360
            VQEE  RRA+L+  K+G  + YSS++AL+ I+ C++CG  YRR  W + G K IVWRC++
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361

Query  361  RLEHGTKVCQYSPTLKEENIEMAVMEVINSVIYGHRGFADTLKGNILTAIKENTEQSSQK  420
            RLE+    C  +PT++EE ++ AV+  IN ++     F  TLK NI T ++E+ +++++ 
Sbjct  362  RLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATD-  419

Query  421  RIDeqlytlqeqllqyvelNAKAGSGSNAYDTKFEQISKKISvlqkqkkefvekeklRAN  480
              D +    + Q    ++ ++K +         +E+++  I  L+  K++ +  +  R  
Sbjct  420  --DIEGKLEELQQQLLIQAKSKND---------YEDVADEIYRLRELKQNALAENAEREG  468

Query  481  NEQRIDDITKFFDSSN-GITQFDNELVRRL  509
            + QRI ++T F++  +  + ++D++LVRRL
Sbjct  469  KRQRIAEMTDFLNEQSCELEEYDEQLVRRL  498

42) Desaci_1341 in NC_018068


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  437 bits (1644),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 257/495 (52%), Positives = 369/495 (75%), Gaps = 16/495 (3%)

Query  3    TVTVIPA-KPMQELKGLEATAKLRVCAYARVSTDNEEQLSSYQAQVEHYTSYIQNNPAWE  61
             VTVIPA K + + K  E+ +K+RV AY RVSTD+EEQ SSY+ Q+EHYT+YI++N  WE
Sbjct  6    NVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWE  65

Query  62   FVEIFSDEGISGTNTKKREGFNRMIDECMAGKIDMVITKSISRFARNTLDTLKYVRQLKE  121
            +  IF+D+GI+GTNTKKRE FNRMI+ECMAGKIDM+ITKSISRFARNTLD LKY+RQLK+
Sbjct  66   LAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKD  125

Query  122  KGVAIFFEKEVVNTLDSKGEFLITLLGSLAQEESSNLSQITKMGISYRFQEGKVLVNHNK  181
            K +A+FFEKE +NT+DSKGE+++T+++SLAQ+ES +LSQ  K+GI YR+Q+G V VNH++
Sbjct  126  KNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKR  185

Query  182  FLGYTKDEQGQLVIVPEEAEVVRRIYREFLDGKSPYKIASNLQKDGLITGAGGTKWYDST  241
            FLGYTKDE+ QLVI PE AEVV+RIYRE+L+G S  +I+  L+ DG++T+AG +KW   T
Sbjct  186  FLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPET  245

Query  242  VIGILKNVKYMGDALLQKTYTVDFLTKKRVKNTGHAAQYYVEDSHEAIISKEEFAAVQAE  301
            +  IL+N KY+GDALLQKTYTVDFL+KKRVKN G  +QYYVE+SHE+II++E F  VQ E
Sbjct  246  LKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEE  305

Query  302  FERRANMRGYSKTGKSK-FTSDYAFSGKLFCGNCGSKFRRSKWGSGKNLQIVWICINH--  358
              RRAN+RG  K GK + ++S YA+S+ ++CG+CG  +RR  W +     IVW C+++  
Sbjct  306  MVRRANLRG-RKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  359  QTGGDCDMKPVKEKALEQAFVRAMNRIIANKEAYLTE--ETTGPQFD------FEAIDSK  410
            + G++C    ++E +L+ A V+A+N ++ANKE++L+      +  F+       + I++K
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGK  424

Query  411  IDELQQELIDAVRNNQEYS--TAEIERLQAHKQRRKNDEAERAWKGRLVEDFKSYLDARD  468
            ++ELQQ+L+   +++++Y   + EI RL+  KQ    ++AER  K + + +   +L+ + 
Sbjct  425  LEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQS  484

Query  469  GKPLDKFDGDLFRKL  483
               L+ +D +L R+L
Sbjct  485  C-ELEEYDEQLVRRL  498

43) DHBDCA_p1321 in NC_018866


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  424 bits (1597),  Expect = 6e-120, Method: Compositional matrix adjust.
 Identities = 252/535 (48%), Positives = 393/535 (74%), Gaps = 20/535 (3%)

Query  10   KSISFIPPQPEYDRSIKPQFKA-LRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNW  68
            ++++ IP+    + +  ++ K+ +RVAAYCRVST  E+Q +SYE Q+  YT+ IK N +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  69   KLAGIFADDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLK  128
             LAGIFADDG ++TNTKKR++FN MIE+CMAGKIDM+ITKS+SRFARNT+D L+ IR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  129  EKNVAVFFEKEGVNTLDGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHN  188
            +KN+AVFFEKE +NT+D+ GE+++TI++S AQ+ES++LS+N + G+  R+++G V VNH+
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  189  KFLGYTKDKNNELVIVPEEAELVRRIFRLYLEGSSIVQITKILESEGITTVTGLDKWCPG  248
            +FLGYTKD N++LVI PE AE+V+RI+R YLEG+S++QI++ LE++GI T +G  KW P 
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  249  TINKMLSNEKYMGDVLQQKTYTIDFLTKKRVLNKGIVPQYYIEDDHEAIIPKELYYQVQE  308
            T++K+L NEKY+GD L QKTYT+DFL+KKRV N+GIVPQYY+E+ HE+IIP+EL+ QVQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  309  EKARRASLHKPSVARkekkekskysskFALTDIMVCKECGQPYRRQIWSKYGQKTAVWRC  368
            E  RRA+L+    ++     K  YSSK+AL+ I+ C +CG+ YRR  W++ G K+ VWRC
Sbjct  305  EMVRRANLRGRKGGK-----KRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  369  DNRLKNGTKNCKHSPTFKEDVLHEAIMTAINSVVENRGEFVGAFRENVIRVIGNYSTKNV  428
             +RL +   +C  +PT++E+ L+ A++ AIN ++ N+  F+++++ N+  V+ +    N 
Sbjct  360  VSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDNA  417

Query  429  PTEYDGQIEKLQAEMLALIEENAKQGSITEDFDEQYHRIAERINDLKQKKLELVREQKMA  488
              + +G++E LQ ++  LI+ ++K         ++Y+ +A+ I  L++ K + + E+   
Sbjct  418  TDDIEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENAER  466

Query  489  ANFQQRVEDMDACLKKTTCEVGEFDNDLVRRLLQSIKAVKDDLIEIQFKSGIVMN  543
               +QR+ +M   L+  +CE+ E+D++LVRRL++ +    D L  ++FKSG+ ++
Sbjct  467  EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDKLT-VEFKSGVEID  520

44) DSY3426 in NC_007907


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  423 bits (1592),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 257/537 (48%), Positives = 391/537 (73%), Gaps = 28/537 (5%)

Query  24   KNISMIPPQPEYDRSIRPQFKA-LRVAAYCRVSTTQEQQETSYEAQISYYTEKIKSNPNW  82
            +N+++IP+    + +  ++ K+ +RVAAYCRVST  E+Q +SYE QI  YT+ IK N +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  83   KFAGIYADDGKSATNTKKRNDFNTMIEDCLAGKIDMVITKSVSRFARNTVDSLQNIRKLK  142
             +AGI+ADDG ++TNTKKR++FN MIE+C+AGKIDM+ITKS+SRFARNT+D L+ IR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  143  EKNIAVFFEKEGINTLEGSGELLITILSSQAQEESRNLSENTRWGLVRRFEKGIVSINHN  202
            +KNIAVFFEKE INT+++ GE+++TI++S AQ+ES++LS+N + G+  R+++G V +NH+
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  203  KFLGYTKDENGELVIVPEEAKLVRRIFLLYLEGKSLAKICKILESEGIRTVTGLKKWCSG  262
            +FLGYTKDEN +LVI PE A +V+RI+  YLEG SL +I + LE++GI T +G  KW + 
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  263  VIYKMLSNEKYMGDVLQQKSYTIDYLNKKRVKNDGIVPQYYIEDDHEAIIPKELFYRVQE  322
             + K+L NEKY+GD L QK+YT+D+L+KKRVKN+GIVPQYY+E+ HE+IIP+ELF +VQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  323  EKARRAGLRKTTATRRAKQEKEKSKYSSIYALSDIMICKECGLPYRRQIWSKYGRKSAVW  382
            E  RRA L       R+++   K  YSS YALS I+ C +CG  YRR  W++ G KS VW
Sbjct  305  EMVRRANL-------RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVW  357

Query  383  RCENRLKNGTKHCKHSPTLKEEVLQGAVMTAINSVVENQGEFVGAFRENVIRVIGSYSTK  442
            RC +RL +   +C  +PT++EE LQ AV+ AIN ++ N+  F+++++ N+  V+      
Sbjct  358  RCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-END  415

Query  443  NIPTPYDGEIEKLQNQMLALIEENARKGSVTEEFDQQYQGIAMQI---KDLKQKKLELAR  499
            N     +G +E LQ+Q+  LI+ ++++         +Y+++A +I   ++LKQ+ L    
Sbjct  416  NATDDIEGKLEELQQQL--LIQAKSKN---------DYEDVADEIYRLRELKQNALAENA  464

Query  500  ERKQAESIQQRVVDMDAYLKRTTCEVREFDDDLVRRLLQNIRVINDELLEIQFRSGI  556
            ER   E+ +QR+ +M  +L+  +CE+ E+D++LVRRL++++ V++D  L ++F+SG+
Sbjct  465  ER---EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDK-LTVEFKSGV  517

45) Desdi_1399 in NC_019903


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  421 bits (1585),  Expect = 6e-119, Method: Compositional matrix adjust.
 Identities = 250/514 (49%), Positives = 382/514 (75%), Gaps = 21/514 (4%)

Query  31   LRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSATNTKKRDDFN  90
            +RVAAYCRVST  E+Q +SYE Q+  YT+ IK N +W LAGI+ADDG ++TNTKKR++FN
Sbjct  28   IRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFN  87

Query  91   AMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNVAVFFEKEGVNTLEGTGELL  150
             MIE+CMAGKIDM+ITKS+SRFARNT+D L+ IR+LK+KN+AVFFEKE +NT+++ GE++
Sbjct  88   RMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIM  147

Query  151  ITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNGELVIVPEEADLV  210
            +TI++S AQ+ES++LS+N + G+  R+++G V VNH++FLGYTKD N +LVI PE A++V
Sbjct  148  LTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVV  207

Query  211  RRIFRLYLEGSSIIQITKILESEGITTVTGKSQWCPGVIDKMLSNEKYMGDVLQQKTYTI  270
            +RI+R YLEG+S++QI++ LE++GI T +GK++W P  + K+L NEKY+GD L QKTYT+
Sbjct  208  KRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTV  267

Query  271  DFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLSktaaarrakqekek  330
            DFL+KKRVKN+GIVPQYY+E+ HE+IIP+EL+ QVQEE  RRA+L        +++   K
Sbjct  268  DFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLR-------GRKGGKK  320

Query  331  skysskFALSDIMVCKECGQPYRRQVWSKYGQKSAVWRCENRLKNGTKNCKHSPTFKEEI  390
              YSSK+ALS I+ C +CG+ YRR  W++ G KS VWRC +RL +   +C  +PT++EE 
Sbjct  321  RVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECT-APTINEET  379

Query  391  LHEAIMTAINSVVENRGEFVGAFRENVIRVIGSYSTKNMTTEFDGQIEKLQGEMLALIEE  450
            L+ A++ AIN ++ N+  F+++++ N+  V+      N T +++G++E LQ ++L     
Sbjct  380  LQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDNATDDIEGKLEELQQQLLI----  434

Query  451  NAKQGSIKEDFDERYKRIAEQINDLKQKKLELVREQKMAVNFQQRLDDMDACLKKTTCEV  510
               Q+  K+D+++    +A++I  L++ K + + E+      +QR+ +M   L+  +CE+
Sbjct  435  ---QAKSKNDYED----VADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQSCEL  487

Query  511  REFDNDLVRRLLQNIKAVKDDLIEIQFKSGIVMN  544
             E+D++LVRRL++++    D L  ++FKSG+ ++
Sbjct  488  EEYDEQLVRRLIEKVTVFDDKLT-VEFKSGVEID  520

46) Dtox_1526 in NC_013216


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  419 bits (1579),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 247/512 (49%), Positives = 379/512 (75%), Gaps = 22/512 (4%)

Query  31   LRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSATNTKKREDFN  90
            +RVAAYCRVST  E+Q +SYE Q+  YT+ IK N +W LAGI+ADDG ++TNTKKRE+FN
Sbjct  28   IRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFN  87

Query  91   AMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNIAVFFEKEGVNTLEGTGELL  150
             MIE+CMAGKIDM+ITKS+SRFARNT+D L+ IR+LK+KNIAVFFEKE +NT+++ GE++
Sbjct  88   RMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIM  147

Query  151  ITILSSQAQEESRNLSENTRWGLVRRFENGVVSVNHNKFLGYTKDKNGELVIVPEEAELV  210
            +TI++S AQ+ES++LS+N + G+  R+++G V VNH++FLGYTKD N +LVI PE AE+V
Sbjct  148  LTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVV  207

Query  211  RRIFRLYLEGSSSIQIAKILESEGVLTVTGKSKWCSTVIDKMLLNEKYMGDVLQQKTYTI  270
            +RI+R YLEG+S +QI++ LE++G+LT +GK+KW +  + K+L NEKY+GD L QKTYT+
Sbjct  208  KRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTV  267

Query  271  DFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLCKQAMSRKAKRDEKE  330
            DFL+KKRVKN+GIVPQYY+E+ HE+IIP+EL+ QVQEE  RRA+L       +++++ K 
Sbjct  268  DFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANL-------RGRKGGKK  320

Query  331  KSRYSSKFALSDIMVCRECGQPYRRQVWSKYGQKNAVWRCENRLKNGTKNCKHSPTYKEV  390
            +  YSSK+ALS I+ C +CG+ YRR  W++ G K+ VWRC +RL +   +C  +PT +E 
Sbjct  321  RV-YSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECT-APTINEE  378

Query  391  MLYEAIMAAINSVVENRGEFVGAFRENVIRVIGSYSTKNLSTEYDMQIEKLQTEMLALIE  450
             L  A++ AIN ++ N+  F+++++ N+  V+      N + + + ++E LQ ++  LI+
Sbjct  379  TLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDNATDDIEGKLEELQQQL--LIQ  435

Query  451  ENAKQGVVTEDFDERYKGISERINDMKQKKLDQVRELKMAENYQQRLNDMDACLKKTTCD  510
             ++K++         Y ++++ I  +++ K + + E    E  +QR+ +M   L+  +C+
Sbjct  436  AKSKND---------YEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQSCE  486

Query  511  VRDFDHDLVRRLLQSVKAIRDDEIEIQFKSGI  542
            + ++D++LVRRL++ V  + DD + ++FKSG+
Sbjct  487  LEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGV  517

47) HMPREF0538_20542 in NC_015697


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  419 bits (1576),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 262/527 (50%), Positives = 382/527 (73%), Gaps = 10/527 (1%)

Query  3    KVRIIPAQVKQGNRNRQIEESEAKLKVAAYCRVSTLYEDQASSYETQVAHYKEFITKNPK  62
            +V +IPA  + GN +    ES +K++VAAYCRVST  E+QASSYE Q+ HY ++I KN  
Sbjct  6    NVTVIPAIKRVGNNK--TSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKE  63

Query  63   WELAGIYADDGISGTDTKKRNQFNQMIDDAKQGKIDLIVTKSISRFARNTIDCLQYIREL  122
            WELAGI+ADDGI+GT+TKKR++FN+MI++   GKID+I+TKSISRFARNT+DCL+YIR+L
Sbjct  64   WELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQL  123

Query  123  KELHVAVFFEKENINTMDAKGEVLITIMASLAQQESESISRNIKIGLQYRYQRGQVIVNT  182
            K+ ++AVFFEKENINTMD+KGE+++TIMASLAQQES+S+S+N+K+G+QYRYQ+G+V VN 
Sbjct  124  KDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNH  183

Query  183  ARFLGYDKDDDGNLVINPEQAKVVKRIFYECLTGKSAIEIARELTKEGIKNGIGRTQWHS  242
             RFLGY KD++ +LVI+PE A VVKRI+ E L G S ++I+R L  +GI  + G+++W++
Sbjct  184  KRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRP  243

Query  243  SGIIKILRNEKYIGDALLQKTYTVDFLTKKRVKNDGQVPQYYVENNHPAIISRAVFYQVQ  302
              + KIL+NEKYIGDALLQKTYTVDFL+KKRVKN+G VPQYYVEN+H +II+R +F QVQ
Sbjct  244  ETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQ  303

Query  303  KLLDMRREGFTT-EgghhhgYTNAYCFSSIVYCGRCKDIYTRCVWYRPRIGEVEKVNVWR  361
              + +RR  +    GG  + Y++ Y +SSIVYCG+C DIY R  W       +    VWR
Sbjct  304  EEM-VRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSI----VWR  358

Query  362  CYSRLHWNHKGKRCMGRTITEADLEEASLKAMNELIQQHQLADKQIAANILKVTKGTTGP  421
            C SRL  ++KG  C + TI E  L+ A +KA+NEL+ + +     +  NI  V +   + 
Sbjct  359  CVSRL--EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDN  416

Query  422  SldeldqqledqqllllNMSTHNKNVEQLTEQVQALRKQREQLIQQEIDHDIKRSNLKNI  481
            + D+++ +LE+ Q  LL  +  +++ E++++++  LR  +++ + ++ +++ KR  + ++
Sbjct  417  ATDDIEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEM  476

Query  482  QSFFQTYQGGLTKFDEKLVRLLIEKITIFKSKIDFTFKDGEVITVKM  528
              F++     L  +DE+LVR LIEK+T+F  K+   FK G  I + +
Sbjct  477  TDFLNEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

48) LGAS_1491 in NC_008530


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  418 bits (1575),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 250/477 (53%), Positives = 360/477 (76%), Gaps = 3/477 (0%)

Query  31   VQVDHYKELIQKEPPWEFAGIYADDGISGTNTKKREQFNKMIAACKVGKIDLIVTKSISR  90
            +Q++HY + I+K+  WE+AGI+ADDGI+GTNTKKRE+FN+MI  C  GKID+I+TKSISR
Sbjct  49   IQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISR  108

Query  91   FARNTIDCLKYIRDLKAINVAIFFEKENINTMDAKGEVLITIMaslaqqeseslsqNVKM  150
            FARNT+DCLKYIR+LK  N+A+FFEKENINTMD+KGE+++TIMASLAQQES+SLSQNVK+
Sbjct  109  FARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKL  168

Query  151  GIQYRYQQGKVFVNHNHFLGYTKDAQGNLVIEPEEAKVIKRIFYSYLNGMTMKQIADSLK  210
            GIQYRYQQG V VNH++FLGYTKD + +LVI+PE A V+KRI+  YL+G ++ QI+ +L 
Sbjct  169  GIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLE  228

Query  211  ADGILTGGKTKNWRSSSVAKILKNEKYMGDALLQKTYTVDFLNKKRVKNEGIMPQYYVEN  270
            ADGILT++   +WR+ ++ KIL+NEKY+GDALLQKTYTVDFL+KKRVKN+GI+PQYYVEN
Sbjct  229  ADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVEN  288

Query  271  DHPAIIPKSVFMQVQQIIKQRRNGITTKNGKHRRINGKYCFSQKVFCGKCGDILQRNMW-  329
             H +IIP+ +FMQVQ+ + +R N    K GK R  ++KY +S  V+CG CGDI +R  W 
Sbjct  289  SHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWN  348

Query  330  YRPEKVAVWRCASRVRRNKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELASKQIKANI  389
             R  K  VWRC SR+  +  G  C    ++E  L+ A V A+N+L+   E     +K NI
Sbjct  349  NRGYKSIVWRCVSRL--EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNI  406

Query  390  MKVIKNSKGPTLDQIDQQLEEVQMKLIQAANQHQDCDALTQQIMDLRRQKEKVQSRETDQ  449
              V+++ ++ + D+I+ +LEE+Q +L+  A+  +D + ++++I  LR  K++  + ++++
Sbjct  407  ATVFNEENDNATDDIEGKLEELQQQLLIQAKSKNDYEDVADEIYRLRELKQNALAENAER  466

Query  450  QAKLHSIDEINELVNLHKYGLVDFDEQLVRRLVEKITIFQRYMEFTFKDGEVIRVNM  506
            ++K + I E+ +++N +   L ++DEQLVRRL+EK+T+F+  +   FK G  I +++
Sbjct  467  EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

49) Desgi_3517 in NC_021184


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  416 bits (1566),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 247/516 (48%), Positives = 377/516 (74%), Gaps = 23/516 (4%)

Query  32   LRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSATNTKKRDDFN  91
            +RVAAYCRVST  E+Q +SYE Q+  YT+ IK N +W LAGI+ADDG ++TNTKKR++FN
Sbjct  28   IRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFN  87

Query  92   AMIEDCMAGKIDMVITKSVSRFARNTVDSLMNIRKLKEKNVAVFFEKEGVNTLEGTGELL  151
             MIE+CMAGKIDM+ITKS+SRFARNT+D L  IR+LK+KN+AVFFEKE +NT+++ GE++
Sbjct  88   RMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIM  147

Query  152  ITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNGELVIVPEEAELV  211
            +TI++S AQ+ES++LS+N + G+  R+++G V VNH++FLGYTKD N +LVI PE AE+V
Sbjct  148  LTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVV  207

Query  212  RRIFRLYLEGSSVIQIAKLLESEGITTVTGGTKWWDSTINKMLSNEKYMGDVLQQKTYTI  271
            +RI+R YLEG+S++QI++ LE++GI T +G +KW+  T++K+L NEKY+GD L QKTYT+
Sbjct  208  KRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTV  267

Query  272  DFLTKKRVKNDGIVPQYYIEDDHEAIIPKELFYQVQEEKARRASLSKTAATRkakqeqek  331
            DFL+KKRVKN+GIVPQYY+E+ HE+IIP+ELF QVQEE  RRA+L    + +        
Sbjct  268  DFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGK--------  319

Query  332  kkskysskFALSDIMVCKECGQPYRRQVWSKYGQKSAVWRCENRLKNGTKNCKHSPTFKE  391
             K  YSSK+ALS I+ C +CG+ YRR  W++ G KS VWRC +RL +   +C  +PT++E
Sbjct  320  -KRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECT-APTINE  377

Query  392  AVLHEAVMTAINSVVENRGEFVGAFRENVIRVIGSYSTKNVPTEYDEQIQKLQGEMLALI  451
              L+ AV+ AIN ++ N+  F+++++ N+  V+      N   + + +++ LQ ++  LI
Sbjct  378  ETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDNATDDIEGKLEELQQQL--LI  434

Query  452  EENAKQGSITEDFDEQYHRIAEQINDLKQKKLEMVRDQKMAENFQQRLDDMDACLKKTTY  511
            + ++K         ++Y+ +A++I  L++ K + + ++   E  +QR+ +M   L+  + 
Sbjct  435  QAKSK---------NDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQSC  485

Query  512  EVRDFDNDLVRRLLQSIKAVKDDLIELQFKSGIVMN  547
            E+ ++D++LVRRL++ +    D L  ++FKSG+ ++
Sbjct  486  ELEEYDEQLVRRLIEKVTVFDDKLT-VEFKSGVEID  520

50) ROI_03000 in NC_021040


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  414 bits (1559),  Expect = 6e-117, Method: Compositional matrix adjust.
 Identities = 250/540 (47%), Positives = 388/540 (72%), Gaps = 21/540 (3%)

Query  4    TAKKISMIPA--KVQYDRNVKLSEKKMKVAAYCRVSTELEEQDSSYEAQVEYYTSKISEN  61
             ++++++IPA  +V  ++    S  K++VAAYCRVST+ EEQ SSYE Q+E YT+ I  N
Sbjct  3    VSRNVTVIPAIKRVGNNKTSE-SKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  62   ENWKNAGIYADDGKSGTNTKKRADFNAMIQDALAGKIDMILTKSVSRFARNTVDSLVTIR  121
             +W  AGI+ADDG +GTNTKKR +FN MI++ +AGKIDMI+TKS+SRFARNT+D L  IR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  122  KLKEKNVAVVFEKEGINTLEGTGEILITILSSLAQEESRNISENIRWGVVRKFEKGKVIV  181
            +LK+KN+AV FEKE INT+++ GEI++TI++SLAQ+ES+++S+N++ G+  ++++G V V
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  182  NCTKFMGYTKNEDGDLVIVPEEAEIVKLIFRLYLEGYSTGKIAKHLEEQGIKTATGQDKW  241
            N  +F+GYTK+E+ +LVI PE AE+VK I+R YLEG S  +I++ LE +GI TA+G+ KW
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  242  HSTVIDKMLRNEKYMGDALLQKTYTVDFMTKKKVKNTGLVPQYYVEDDHEAIIPKELFYR  301
            ++  + K+L+NEKY+GDALLQKTYTVDF++KK+VKN G+VPQYYVE+ HE+IIP+ELF +
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  302  VQEEMMRRASLCKAAVTRKKNQRSRYSSTYALTGMLICGKCGQEYRRVTWARNGKKKVVW  361
            VQEEM+RRA+L      RK  ++  YSS YAL++++ CG CG+ YRRV W   G K +VW
Sbjct  302  VQEEMVRRANL----RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVW  357

Query  362  RCSNRLTNGVKKCGESETLEENALNRAVMEAIHRITSDDMEFMENFRQNIIHVIGNYSTA  421
            RC +RL +    C  + T++E++L+ AV+ AI+ + ++   F+  +++NI  V   ++  
Sbjct  358  RCVSRLEEKGSECTAP-TINEETLQTAVVKAINELLANKEPFLSTLKKNIATV---FNEE  413

Query  422  KESGeyeekikekreeMVALIAENAKTGSYTPEFDERYRTIAEEINALKEAQKTARNEKR  481
            ++++  +   K    +   LI  ++K +         Y  +A+EI  L+E ++ A  E+ 
Sbjct  414  NDNATDDIEGKLEELQQQLLIQAKSKND---------YEDVADEIYRLRELKQNALAENA  464

Query  482  MADSYEQRIQDIDHYLSTSTCQIPEFDNDLVRRLISTIKVESSEKLLIQFQSGIVMEKEI  541
              ++  QRI ++ ++L+  +C++ E+D++LVRRLI  + V   +KL ++F+SG+ ++ EI
Sbjct  465  EREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTV-FDDKLTVEFKSGVEIDIEI  523

51) Clo1100_3475 in NC_016791


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  413 bits (1553),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 254/532 (48%), Positives = 393/532 (74%), Gaps = 20/532 (3%)

Query  9    KNISVIPSQPEYDRSIKPQFKT-LRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNW  67
            +N++VIP+    + +  ++ K  +RVAAYCRVST  E+Q +SYE Q+  YT+ IK N +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  68   KLAGIYADDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLK  127
             LAGI+ADDG ++TNTKKR++FN MIE+CMAGKIDM+ITKS+SRFARNT+D L+ IR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  128  EKNIAVFFEKEGVNTLEGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHN  187
            +KNIAVFFEKE +NT+++ GE+++TI++S AQ+ES++LS+N + G+  R+++G V VNH+
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  188  KFLGYTKDKNGELVIVPEEAELVRRIFRLYLEGSSIVQIGKILDDEGITTVTGLTQWCPG  247
            +FLGYTKD N +LVI PE AE+V+RI+R YLEG+S++QI++ L+ +GI T +G ++W P 
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  248  VIDKMLSNEKYMGDVLQQKTYTVDFLSKKRVKNNGIVPQYYIQDDHEAIVPKELYYRVQE  307
             + K+L NEKY+GD L QKTYTVDFLSKKRVKNNGIVPQYY+++ HE+I+P+EL+ +VQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  308  EKTRraslsksavarkakkekskysskyalTDIMVCKECGQPYRRQIWSKYGQKSAVWRC  367
            E  R     ++ +  +    K  YSSKYAL+ I+ C +CG+ YRR  W++ G KS VWRC
Sbjct  305  EMVR-----RANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  368  ENRLKNGTKNCRNSPTLKEEVLQEAVMTAINSVVENRGEFVGAFRENVIQVIGSYSTKNV  427
             +RL +   +C  +PT++EE LQ AV+ AIN ++ N+  F+++++ N+  V+      N 
Sbjct  360  VSRLEEKGSEC-TAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDNA  417

Query  428  PTEYDGQIEKLQGEMLALIEENAKKGSLTEDFDEQYQRIAEQIKNLKQKKLDLVRERKQA  487
              + +G++E LQ ++  LI+ ++K         ++Y+ +A++I  L++ K + + E  + 
Sbjct  418  TDDIEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENAER  466

Query  488  ESFQQRVTDMDVCLKKTTCEIREFDNDLVRRLLQNIRVINEELIEIQFKSGI  539
            E+ +QR+++M   L+  +CE+ E+D++LVRRL++++ V+++ L  ++FKSG+
Sbjct  467  EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDKLT-VEFKSGV  517

52) EUR_11320 in NC_021010


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  411 bits (1547),  Expect = 6e-116, Method: Compositional matrix adjust.
 Identities = 252/540 (47%), Positives = 388/540 (72%), Gaps = 21/540 (3%)

Query  4    TAKKISMIPA--KVQYDRNVKLSEKKMKVAAYCRVSTELEEQDSSYEAQVEYYTSKISEN  61
             ++++++IPA  +V  ++    S  K++VAAYCRVST+ EEQ SSYE Q+E YT+ I  N
Sbjct  3    VSRNVTVIPAIKRVGNNKTSE-SKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  62   ENWKNAGIYADDGKSGTNTKKRADFNAMIQDALAGKIDMILTKSVSRFARNTVDSLVTIR  121
             +W  AGI+ADDG +GTNTKKR +FN MI++ +AGKIDMI+TKS+SRFARNT+D L  IR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  122  KLKEKNVAVVFEKEGINTLEGTGEILITILSSLAQEESRNISENIRWGVVRKFEKGKVIV  181
            +LK+KN+AV FEKE INT+++ GEI++TI++SLAQ+ES+++S+N++ G+  ++++G V V
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  182  NCTKFMGYTKNEDGDLVIVPEEAEIVKLIFRLYLEGYSTGKIAKHLEEQGIKTATGQDKW  241
            N  +F+GYTK+E+ +LVI PE AE+VK I+R YLEG S  +I++ LE +GI TA+G+ KW
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  242  HSTVIDKMLRNEKYMGDALLQKTYTVDFMTKKKVKNTGIVPQYYVEDDHEAIIPKELFYR  301
            ++  + K+L+NEKY+GDALLQKTYTVDF++KK+VKN GIVPQYYVE+ HE+IIP+ELF +
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  302  VQEEMMRRASLCKAAVTRKKNQRSRYSSTYALTGMLICGKCGQEYRRVTWARNGKKKVVW  361
            VQEEM+RRA+L      RK  ++  YSS YAL++++ CG CG+ YRRV W   G K +VW
Sbjct  302  VQEEMVRRANL----RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVW  357

Query  362  RCSNRLTNGVKKCGESETLEENTLNRAVMEAIHRITSDDMEFMENFRQNIIHVIGNYSTA  421
            RC +RL +    C  + T++E+TL+ AV+ AI+ + ++   F+  +++NI  V   ++  
Sbjct  358  RCVSRLEEKGSECTAP-TINEETLQTAVVKAINELLANKEPFLSTLKKNIATV---FNEE  413

Query  422  keseeyeekikekqeeMVALIAENAKTGSYTPEFDERYRTIAEEINALKEAQKTARNEKW  481
            +++   +   K  + +   LI  ++K +         Y  +A+EI  L+E ++ A  E+ 
Sbjct  414  NDNATDDIEGKLEELQQQLLIQAKSKND---------YEDVADEIYRLRELKQNALAENA  464

Query  482  MADSYEQRIQDIDHYLSTSTCQIPEFDNDLVRRLISTIKVESSEKLLIQFQSGIVMEQEI  541
              ++  QRI ++ ++L+  +C++ E+D++LVRRLI  + V   +KL ++F+SG+ ++ EI
Sbjct  465  EREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTV-FDDKLTVEFKSGVEIDIEI  523

53) DSY4590 in NC_007907


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  410 bits (1543),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 243/501 (49%), Positives = 369/501 (74%), Gaps = 27/501 (5%)

Query  2    EQQETSYEAQISYYTEKIKSNPNWKFAGIYADDGKSATNTKKRDDFKAMIGDCLAGKIDM  61
            E+Q +SYE QI  YT+ IK N +W +AGI+ADDG ++TNTKKR++F+ MI +C+AGKIDM
Sbjct  41   EEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDM  100

Query  62   VITKSVSRFARNTVDSLQNIRKLKEKNIAVFFEKEGVNTLEGSGELLITILSSQAQEESR  121
            +ITKS+SRFARNT+D L+ IR+LK+KNIAVFFEKE +NT+++ GE+++TI++S AQ+ES+
Sbjct  101  IITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQ  160

Query  122  NLSENTRWGLVRRFEKGIVSINHNKFLGYTKDENGELVIVPKEAELVRRIFRLYLEGKSL  181
            +LS+N + G+  R+++G V +NH++FLGYTKDEN +LVI P  AE+V+RI+R YLEG SL
Sbjct  161  SLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASL  220

Query  182  AKICKILESEGIRTVTGLKKWRSGVIYKMLSNEKYMGDVLQQKSYTIDYLNKKRVKNNGI  241
             +I + LE++GI T +G  KWR+  + K+L NEKY+GD L QK+YT+D+L+KKRVKNNGI
Sbjct  221  LQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGI  280

Query  242  VPQYYIEDDHEAIIPKELFYRVQEEKARRAGLRKTAATRRAKQEKEKSKYSSIYALSDIM  301
            VPQYY+E+ HE+IIP+ELF +VQEE  RRA L       R+++   K  YSS YALS I+
Sbjct  281  VPQYYVENSHEPIIPRELFMQVQEEMVRRANL-------RGRKGGKKRVYSSKYALSSIV  333

Query  302  VCKECGQPYRRQIWSKYGRKSAVWRCENRLKNGTKHCRHSPTLKEEVLQGAVMTAINSVV  361
             C +CG+ YRR  W++ G KS VWRC +RL +   +C  +PT++EE LQ AV+ AIN ++
Sbjct  334  YCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSEC-TAPTINEETLQTAVVKAINELL  392

Query  362  ENRGEFVGAFRENVIRVIGSYSTKNVSTQYDGEIEKLQSQMLALIEENARKGSVTEEFDQ  421
             N+  F+++++ N+  V+      N + + +G +E LQ Q+  LI+ ++++         
Sbjct  393  ANKEPFLSTLKKNIATVFNE-ENDNATDDIEGKLEELQQQL--LIQAKSKN---------  440

Query  422  QYQGIAMQI---KDLKQKKLELARERKQAEDFQQRVVDMDAYLKRTTCEVREFDDDLVRR  478
            +Y+++A +I   ++LKQ+ L    ER   E+ +QR+ +M  +L+  +CE+ E+D++LVRR
Sbjct  441  DYEDVADEIYRLRELKQNALAENAER---EGKRQRIAEMTDFLNEQSCELEEYDEQLVRR  497

Query  479  LLQNIRVINDELLEIQFRSGI  499
            L++++ V++D  L ++F+SG+
Sbjct  498  LIEKVTVFDDK-LTVEFKSGV  517

54) CLJU_c03770 in NC_014328


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  403 bits (1518),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 237/430 (56%), Positives = 331/430 (77%), Gaps = 3/430 (0%)

Query  3    KVSVIPA-KQVQVINGIKDKKKKRVCAYCRVSTDTDEQLTSYEAQVTYYESYIRGKPEYE  61
            +V+VIPA K+V   +    K K RV AYCRVSTD++EQ +SYE Q+  Y +YI+ + E E
Sbjct  6    NVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWE  65

Query  62   FAGIFADEGITGTNTKHRTEFKRMIDEALAGKFDMIITKSISRFARNTLDCLKYVRLLRD  121
            +AGIFAD+GITGTNTK R EF+RMI+E +AGK+DMIITKSISRFARNTLDCLKY+R L+D
Sbjct  66   LAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKD  125

Query  122  KGIGVYFEKENIDTLDSKGEVLLTILSSLAQDESRNISENSRWGIVRRFQQGKVRVNHKR  181
            K I+V+FEKENI+T+DSKGE++LTI++SLAQ+ES+++S+N + GI  R+QQG V+VNHKR
Sbjct  126  KNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKR  185

Query  182  FLGYDKDENGELIIDEEQAKIVRRIYKEYLEGKGIRAIGKDLERDNILTGAGGRKWHDST  241
            FLGY KDEN +L+ID E A +V+RIY+EYLEG ++  I+++LE D ILT+AG  KW+  T
Sbjct  186  FLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPET  245

Query  242  IQKILRNEKYSGDALLQKTITTDFLTHKRVKNKGEVQQYYVEDSHPAIISKEMFRMVQEE  301
            ++KIL+NEKY GDALLQKT T DFL+ KRVKN+G V QYYVE+SH +II++E+F  VQEE
Sbjct  246  LKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEE  305

Query  302  IKRRASLIGYSEKTKSRYTNKYAFSGRIVCGNCGSKFRRKRWGPGEKYKKYVWLCANHID  361
            + RRA+L G     K  Y++KYA+S+ + CG+CG  +RR +W     YK  VW C ++++
Sbjct  306  MVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVSRLE  364

Query  362  NGLKACSMKAVSEEKLKAAFVRSINKIIENKEAFIKTMMENISRVSESKEDRSELKIINE  421
            +    C+  +++EE L++A V++IN ++ NKE+F+ T+  NI+ V +  +D +    I+ 
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNAT-DDIEG  423

Query  422  SLEELKEQMM  431
             LEEL++Q++
Sbjct  424  KLEELQQQLL  433

55) Clo1100_3409 in NC_016791


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  401 bits (1509),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 253/537 (48%), Positives = 392/537 (73%), Gaps = 22/537 (4%)

Query  9    KNISMIPSRPEYDRSIKPQFKA-LRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNW  67
            +N+++IP+    + +  ++ K+ +RVAAYCRVST  E+Q +SYE Q+  YT+ IK N +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  68   KLAGIYADDGKSATNTKKRDDFNAMIEDCMAGKIDMIITKSVSRFARNTVDSLQNIRKLK  127
             LAGI+ADDG ++TNTKKR++FN MIE+CMAGKIDMIITKS+SRFARNT+D L+ IR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  128  EKNIAVFFEKEGVNTLEGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGVVSVNHN  187
            +KNIAVFFEKE +NT+++ GE+++TI++S AQ+ES++LS+N + G+  R+++G V VNH+
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  188  KFLGYTKDKNGELVIVPEEAELVRRIFRLYLEGKSIVEIIKvletegvttvtglDKWCPG  247
            +FLGYTKD N +LVI PE AE+V+RI+R YLEG S+++I + LE++G+ T +G  KW P 
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  248  TINKMLSNEKYMGDVLQQKTYTIDFLTKKRVKNQGIVPQYYIEDDHEAIIPKELYYQVQE  307
            T++K+L NEKY+GD L QKTYT+DFL+KKRVKN+GIVPQYY+E+ HE+IIP+EL+ QVQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  308  EKARRASLSktaaarrakqekekskysskFALSDIMVCKECGQPYRRQVWSKYGQKSAVW  367
            E  RRA+L        +++   K  YSSK+ALS I+ C +CG+ YRR  W++ G KS VW
Sbjct  305  EMVRRANLR-------GRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVW  357

Query  368  RCENRLKNGTKNCKHSPTFKEDILYEAIMTAINSVVENRGEFVGAFRENVIRVIGSYSTK  427
            RC +RL +   +C  +PT++E+ L  A++ AIN ++ N+  F+++++ N+  V+      
Sbjct  358  RCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-END  415

Query  428  NVPTEYDGQIEKLQGEMLALIEQNAKQGSITEDFDEQYQRIAEQIRDLKQKKLELVRAQK  487
            N   + +G++E LQ ++  LI+ ++K         ++Y+ +A++I  L++ K + +  + 
Sbjct  416  NATDDIEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENA  464

Query  488  IAENFQQRLDDMDTCLKKTTCEVREFDNDLVRRLLQNIKAVKEDLIEIQFKSGIVMN  544
              E  +QR+ +M   L+  +CE+ E+D++LVRRL++++    + L  ++FKSG+ ++
Sbjct  465  EREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDKLT-VEFKSGVEID  520

56) LM5923_1807 in NC_013768


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  398 bits (1498),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 255/535 (48%), Positives = 386/535 (73%), Gaps = 20/535 (3%)

Query  7    KNISVIPSQPEYDRSIKVQFK-MLRVAAYCRVSTTLEQQESSYEAQVSYYTEKIQSNPNW  65
            +N++VIP+    + +   + K  +RVAAYCRVST  E+Q SSYE Q+  YT+ I+ N +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  66   KLAGIYADDGKSATNTKKRDDFNTMIDDCMAGKIDLVITKSVSRFARNTVDSLQNIRKLK  125
             LAGI+ADDG ++TNTKKR++FN MI++CMAGKID++ITKS+SRFARNT+D L+ IR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  126  EKNIGVIFEKEGVNTLDGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGVISVNHT  185
            +KNI+V+FEKE +NT+D+ GE+++TI++S AQ+ES++LS+N + G+  R+++G + VNH 
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  186  KFLGYTKDENGELVIVPEEAELVRRIFRLYLEGNSSIKIAKILKADGIKTVTGMDTWQPS  245
            +FLGYTKDEN +LVI PE AE+V+RI+R YLEG S ++I++ L ADGI T +G   W+P 
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  246  VIDQMLRNEKYMGDALLQKTYTVDFLSKKRVKNQGIVPQYYIEDNHEAIIPRELFYRAQE  305
             + ++L+NEKY+GDALLQKTYTVDFLSKKRVKN+GIVPQYY+E++HE+IIPRELF + QE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  306  EKARRAAIYkpsiekksktekskysskyslsDIMICGECGQPYRRQTWSKYGQKSAVWRC  365
            E  RRA +       +    K  YSSKY+LS I+ CG+CG+ YRR  W++ G KS VWRC
Sbjct  305  EMVRRANL-----RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  366  DNRLKNGTKNCKHSPTLKEQPLYEAIMTAINSVVENQGEFVGAFRENVIRVIGSYSTRHI  425
             +RL +   +C  +PT++E+ L  A++ AIN ++ N+  F+++++ N+  V+      + 
Sbjct  360  VSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDNA  417

Query  426  PSEYDEQIEKLQGEMLTLIEENAKQGSVNENFDEQYHSIAEKIRElklkklklTQENRLA  485
              + + ++E LQ ++  LI+ ++K         ++Y+ +A+ I  L+  K +   EN   
Sbjct  418  TDDIEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENAER  466

Query  486  ETFSQRIDDVDHCLKDITSTVGGYDDELVRRLLQSVKVISEDKLEIQFKSGIVME  540
            E   QRI ++ + L++ +  +  YD++LVRRL++ V V+ +DKL ++FKSG+ ++
Sbjct  467  EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGVEID  520

57) LM5578_1855 in NC_013766


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  398 bits (1498),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 255/535 (48%), Positives = 386/535 (73%), Gaps = 20/535 (3%)

Query  7    KNISVIPSQPEYDRSIKVQFK-MLRVAAYCRVSTTLEQQESSYEAQVSYYTEKIQSNPNW  65
            +N++VIP+    + +   + K  +RVAAYCRVST  E+Q SSYE Q+  YT+ I+ N +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  66   KLAGIYADDGKSATNTKKRDDFNTMIDDCMAGKIDLVITKSVSRFARNTVDSLQNIRKLK  125
             LAGI+ADDG ++TNTKKR++FN MI++CMAGKID++ITKS+SRFARNT+D L+ IR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  126  EKNIGVIFEKEGVNTLDGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGVISVNHT  185
            +KNI+V+FEKE +NT+D+ GE+++TI++S AQ+ES++LS+N + G+  R+++G + VNH 
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  186  KFLGYTKDENGELVIVPEEAELVRRIFRLYLEGNSSIKIAKILKADGIKTVTGMDTWQPS  245
            +FLGYTKDEN +LVI PE AE+V+RI+R YLEG S ++I++ L ADGI T +G   W+P 
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  246  VIDQMLRNEKYMGDALLQKTYTVDFLSKKRVKNQGIVPQYYIEDNHEAIIPRELFYRAQE  305
             + ++L+NEKY+GDALLQKTYTVDFLSKKRVKN+GIVPQYY+E++HE+IIPRELF + QE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  306  EKARRAAIYkpsiekksktekskysskyslsDIMICGECGQPYRRQTWSKYGQKSAVWRC  365
            E  RRA +       +    K  YSSKY+LS I+ CG+CG+ YRR  W++ G KS VWRC
Sbjct  305  EMVRRANL-----RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  366  DNRLKNGTKNCKHSPTLKEQPLYEAIMTAINSVVENQGEFVGAFRENVIRVIGSYSTRHI  425
             +RL +   +C  +PT++E+ L  A++ AIN ++ N+  F+++++ N+  V+      + 
Sbjct  360  VSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDNA  417

Query  426  PSEYDEQIEKLQGEMLTLIEENAKQGSVNENFDEQYHSIAEKIRElklkklklTQENRLA  485
              + + ++E LQ ++  LI+ ++K         ++Y+ +A+ I  L+  K +   EN   
Sbjct  418  TDDIEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENAER  466

Query  486  ETFSQRIDDVDHCLKDITSTVGGYDDELVRRLLQSVKVISEDKLEIQFKSGIVME  540
            E   QRI ++ + L++ +  +  YD++LVRRL++ V V+ +DKL ++FKSG+ ++
Sbjct  467  EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGVEID  520

58) Closa_2762 in NC_014376


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  394 bits (1481),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 242/543 (45%), Positives = 392/543 (73%), Gaps = 29/543 (5%)

Query  1    MAVAKKTVAIIPPQMKYDRHVRVEQKT-LRVAAYCRVSTLLEQQEGSYEAQVDYYTEKIN  59
            MAV++  V++IP+  + + +   E K  +RVAAYCRVST  E+Q +SYE Q++ YT+ I+
Sbjct  1    MAVSR-NVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIK  59

Query  60   SNPNWKCAGIFADDGKSATQTKKRDDFNAMIDACMAGKVDLVLTKSVSRFARNTVDALQC  119
             N +W  AGIFADDG ++T+TKKR++FN MI+ CMAGK+D+++TKS+SRFARNT+D L+ 
Sbjct  60   KNKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKY  119

Query  120  IRKLKEKNVPVIFEKEGVNTMESGGELLITILSSQAQEESRNISENTRWGLTRRFENGII  179
            IR+LK+KN++V+FEKE +NTM+S GE+++TI++S AQ+ES+++S+N + G+  R+++G +
Sbjct  120  IRQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEV  179

Query  180  SVNHKKFLGYTKDDDGNLIIVPDEAVIVKRIFREYLEGKSIIQIAKGLQDDGIKTVTGLE  239
             VNHK+FLGYTKD++ +L+I P+ A +VKRI+REYLEG S++QI++GL+ DGI T +G  
Sbjct  180  QVNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKA  239

Query  240  NWHPGTIDKMLSNEKFCGDACMQKTYTIDFLTKKKVKNQGYAPQYYIEDNHEAIIPKELF  299
            +W+P T+ K+L NEK+ GDA +QKTYT+DFL+KK+VKN+G  PQYY+E++HE+IIP+ELF
Sbjct  240  KWRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELF  299

Query  300  HQVQVEKARRASL--NKAAVTRkankakkekskysskyVLTELLTCGECGHSYRRQTWSK  357
             QVQ E  RRA+L   K++  R           YSSKY L+ ++ CG+CG+ YRR  W++
Sbjct  300  MQVQEEMVRRANLRGRKGGKKR----------VYSSKYALSSIVYCGHCGDIYRRVHWNN  349

Query  358  YGQKSAVWRCEDRLKQGTSSKCHHSPTLKEEQLHDAIMKAINKVVENNGDFIGTFRENVI  417
             G KS VWRC  RL +  +S C  +PT++EE L+ A++KAIN ++ N+  F++T++ N+ 
Sbjct  350  RGYKSIVWRCVSRL-EEKGSEC-TAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIA  407

Query  418  RVIGNYSTKGVTTEYDDQIDALQKQMLTLIEDNARQGAVSEEFDEAYRKLSEQINELKQA  477
             V+ +      T + +++++ LQ+Q+L        Q+   +++++    ++++I  L++ 
Sbjct  408  TVFNE-ENDNATDDIEGKLEELQQQLLI-------QAKSKNDYED----VADEIYRLREL  455

Query  478  KIQLVRAQKQAENYAERVDELDKAIKTVNPEVREFDQELVKRLIYSIKVNKGMKITIQFH  537
            K + +  + + E   +R+ E+   ++  + E+ E+D++LV+RLI  + V  + K+T++F 
Sbjct  456  KQNALAENAEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDD-KLTVEFK  514

Query  538  SGI  540
            SG+
Sbjct  515  SGV  517

59) HPL003_12150 in NC_016641


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  385 bits (1446),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 247/533 (47%), Positives = 376/533 (71%), Gaps = 15/533 (2%)

Query  5    ATAKKVVIVP-IKTMDIVEGIQSIQKKKVAAYCRVSTDSEEQKESYTNQVNHYTQYIQNN  63
            A +++V ++P IK ++     +S  K +VAAYCRVSTDSEEQ  SY  Q++HYT+YI++N
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  64   LEWEMADIYADEGITGTNTKNRTHFNRMIQDARNGKLDLILVKSISRFARNTLDLLKYVR  123
             EWE+A+I+AD+GITGTNTK+R +FNRMI++   GK+D+I+ KSISRFARNTLD LKY+R
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  124  ELKSLGVAVFFERENINTLDTTGEVLLTILSSLAQDESRNISENSRWGILRGFQNGKVFC  183
            +LK   +AVFFE+ENINT+D+ GE++LTI++SLAQ+ES+++S+N + GI   +Q+G V  
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  184  NTTRFLGYDKDEHGELVINEKEAEIVRRIYEEYLDGKSYQAIARGLIRDHIKTVTGGDTW  243
            N  RFLGY KDE+ +LVI+   AE+V+RIY EYL+G S   I+RGL  D I T +G   W
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  244  WDSSITLILTNEKYYGALLQQKTVTVDFLTHKRIRNKGQEQQYLIEDNHEPIVSKEIFDA  303
            +  ++  IL NEKY G  L QKT TVDFL+ KR++N+G   QY +E++HEPI+++E+F  
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  304  VQKEKERRAKLKGSVMGESKRYSSKYALSSKVYCGCCGAIFKRRTWNSNNPSKKVVWQCK  363
            VQ E  RRA+L+G   G  + YSSKYALSS VYCG CG I++R  WN N   K +VW+C 
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWN-NRGYKSIVWRCV  360

Query  364  TYVNEGKAACDAKSVDEQVLHSAFVRLFNRMYENKERFMKTLKANIVSVLSSKVGREPLL  423
            + ++E  + C A +++E+ L++A V+ +N +  NKE F+ TLK NI +V++   + ++  
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEND-NATD  419

Query  424  EIEGQMQQLKSDLKELVNLKLRNQIDESVYAEETNRLSSELNELRQQMLILeeeedqkek  483
            +IEG++++L+ +L  L++ K +N+ ++   A+E  R    L EL+Q+ L    E+ ++E 
Sbjct  420  DIEGKLEELQQQL--LIQAKSKNDYEDV--ADEIYR----LRELKQNAL---AENAEREG  468

Query  484  ikeRVDEIIQVLSSRQDILEQFVDNLFNALVEKITILSPAHFVFTLKSGMSID  536
             ++R+ E+ + L+ +   LE++ ++L   L+EK+T++    +   +KSG+ ID
Sbjct  469  KRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEID  520

60) PPE_00831 in NC_014483


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  382 bits (1438),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 240/533 (46%), Positives = 373/533 (70%), Gaps = 15/533 (2%)

Query  5    ATAKKVVIVP-VKTLDIVEGIQPIQKKKVAAYCRVSTDSEEQKESYTNQVNHYTKYIQNN  63
            A +++V ++P +K ++     ++  K +VAAYCRVSTDSEEQ  SY  Q++HYT+YI++N
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  64   LEWEMADIYADEGITGTSTKNRTHFNRMIQDARNGKLDLILVKSISRFAMNTLDLLKYVR  123
             EWE+A+I+AD+GITGT+TK+R +FNRMI++   GK+D+I+ KSISRFA NTLD LKY+R
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  124  ELKSLGVAVFFERENINTLDTTGEVLLTILSSLAQDESRNISENSRWGILRGFQNGKVFC  183
            +LK   +AVFFE+ENINT+D+ GE++LTI++SLAQ+ES+++S+N + GI   +Q+G V  
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  184  NTTRFLGYDKDEHGELVINEKEAEIVRRIYEEYLDGKSYQAIARGLMRDKIKTVTGGDTW  243
            N  RFLGY KDE+ +LVI+   AE+V+RIY EYL+G S   I+RGL  D I T +G   W
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  244  WDSSITLILTNEKYYGALLQQKTVTVDFLTHKRIRNKGQEQQYLIEDNHEPIVSKELFEA  303
            +  ++  IL NEKY G  L QKT TVDFL+ KR++N+G   QY +E++HEPI+++ELF  
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  304  VQKEKERRAKMKGSVMGDSKRYSSKYALSSKVYCGCCGAIFKRRTWNSNNASKKVVWQCK  363
            VQ E  RRA+++G   G  + YSSKYALSS VYCG CG I++R  WN N + K +VW+C 
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWN-NRGYKSIVWRCV  360

Query  364  TYVSEGKAACDAKSVDEQVLYAAFVRVFNRMYENKKRLIKTLKANIESVLSSRVEQKSLL  423
            + + E  + C A +++E+ L +A V+ +N +  NK  ++ TLK NI +V++   ++++  
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEE-NDNATD  419

Query  424  DIEGQMQQLKSDLKELVNLKLRNQIDETVYDEETNRLSNELNELRQQKLTLDKEEEQKAN  483
            DIEG++++L+ +L  L++ K +N+ ++    +E  R    L EL+Q+ L+   E+ ++  
Sbjct  420  DIEGKLEELQQQL--LIQAKSKNDYEDVA--DEIYR----LRELKQNALA---ENAEREG  468

Query  484  IKERVDEIIQVLSLREDILEQFDDNLFNALVEKITILSPAHFVFTLKSRTDID  536
             ++R+ E+ + L+ +   LE++D++L   L+EK+T++    +   +KS  +ID
Sbjct  469  KRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEID  520

61) Tph_c07870 in NC_018870


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  380 bits (1428),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 242/536 (46%), Positives = 378/536 (71%), Gaps = 24/536 (4%)

Query  13   KQIIIIPANPLVAQNRTFP--RQLRAAAYCRVSTDQEEQLTSYEAQVAYYTDKIMSNPEW  70
            +++ +IPA   V++N+T     ++R AAYCRVSTD EEQ +SYE Q+  YT+ I  N EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  71   TLAGIFADEGITGTSVKKRTNFLRMIRLCRKGKIDIILTKSISRFARNTVDCLNYIRELK  130
             LAGIFAD+GITGT+ KKR +F RMI  C  GKID+I+TKSISRFARNT+DCL+YIR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  131  ELGIAVIFENENINTMKADTEIIITMLAGFAQAQSESISQNVRWGKRQAFKSGKVSFQYS  190
            +  IAV+FE+ENINTM +  EI++T++A++AQ +S+S+SQNV+ G +  ++ G V  +  
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  191  RIYGYERGENDKPRVVPEQAAVVRRIFQSYLAGSSVPDIKRMLEAEGIVAAEGKPQWSVG  250
            R+ GY ++EN +  + PE A VV+RI++ YL G+S+ +I R LEA+GI++A GK++W   
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  251  ALQYMLRNEKYCGDALLQKTFVENCISKKTRKNNGELPKYLVQNHHEAIIDRTLFEKVQA  310
            +L+ +L+NEKY GDALLQKT+  + +SKK  KNNG +P+Y V+N HE+II R LF +VQ 
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  311  EIARRAGKRKVSDKTSKTGQSK-YSGRYALTELLICGNCGTPYKRVTWSKRGKKKIVWRC  369
            E+ RRA  R       K G+ + YS++YAL+ ++ CG+CG  Y+RV W++RG K IVWRC
Sbjct  305  EMVRRANLR-----GRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  370  ISRLDYGTKYCKSSPTVDEERLQAAVLKAINAMMSNRERLIGILKTNLKITLSEKSSGAT  429
            +SRL+     C ++PT++EE LQ+AV+KAIN +++N+E +++ LK N+   ++E +  AT
Sbjct  360  VSRLEEKGSEC-TAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNAT  418

Query  430  NPYAIENRIRELQDSMMELVAVAAKAGNAESYEDKFREISEEIKSL-QKTLEQYQAEQNG  488
            +   IE ++ ELQ+ +  L+   +K +  +  ++ +R     ++ L Q++L + +AE++G
Sbjct  419  D--DIEGKLEELQQQL--LIQAKSKNDYEDVADEIYR-----LRELKQNALAE-NAEREG  468

Query  489  PDELARQMDDICKALEDAPFEITEYSNNIVRQFIDTIKVVNEDKLLFIFKGGITME  544
              +   +M D+   L++ + E+ EY +++VR++I+ + V  +DKL   FK+G+ ++
Sbjct  469  KRQRIAEMTDF---LNEQSCELEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGVEID  520

62) HM1_0131 in NC_010337


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  379 bits (1425),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 242/536 (46%), Positives = 378/536 (71%), Gaps = 24/536 (4%)

Query  13   KQIIIIPANPLVAQNRTFP--RQLRAAAYCRVSTDQEEQLTSYEAQVAYYTDKIMSNPEW  70
            +++ +IPA   V++N+T     ++R AAYCRVSTD EEQ +SYE Q+  YT+ I  N EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  71   TLAGIFADEGITGTSVKKRTNFLRMIRLCRKGKIDIILTKSISRFARNTVDCLNYIRELK  130
             LAGIFAD+GITGT+ KKR +F RMI  C  GKID+I+TKSISRFARNT+DCL+YIR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  131  ELGIAVIFENENINTMKADTEIIITMLAGFAQAQSESISQNVRWGKRQAFKSGKVSFQYS  190
            +  IAV+FE+ENINTM +  EI++T++A++AQ +S+S+SQNV+ G +  ++ G V  +  
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  191  RIYGYERGENDKPRVVPEQAAVVRRIFQSYLAGSSVPDIKRMLEAEGIAAAGGKPQWSVG  250
            R+ GY ++EN +  + PE A VV+RI++ YL G+S+ +I R LEA+GI +A+GK++W   
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  251  ALQYMLRNEKYCGDALLQKTFVENCISKKTRKNNGELPKYLVQNHHEAIIDRTLFEKVQA  310
            +L+ +L+NEKY GDALLQKT+  + +SKK  KNNG +P+Y V+N HE+II R LF +VQ 
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  311  EIARRAGKRKVSDKTSKTGQSK-YSGRYALTELLICGNCGTPYKRVTWSKRGKKKIVWRC  369
            E+ RRA  R       K G+ + YS++YAL+ ++ CG+CG  Y+RV W++RG K IVWRC
Sbjct  305  EMVRRANLR-----GRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  370  ISRLDYGTKYCKSSPTVDEERLQAAVLKAINAMMSNRERLIGILKTNLKITLSEKSSGAT  429
            +SRL+     C ++PT++EE LQ+AV+KAIN +++N+E +++ LK N+   ++E +  AT
Sbjct  360  VSRLEEKGSEC-TAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNAT  418

Query  430  NPYAIENRIRELQDSMMELVAVAAKAGNAESYEDKFREISEEIKSL-QKTLEQYQAEQNG  488
            +   IE ++ ELQ+ +  L+   +K +  +  ++ +R     ++ L Q++L + +AE++G
Sbjct  419  D--DIEGKLEELQQQL--LIQAKSKNDYEDVADEIYR-----LRELKQNALAE-NAEREG  468

Query  489  PDKLARQMDDICKALEDAPFEITEYSNNIVRQFIDTIKVVNEDKLLFIFKGGITME  544
              +   +M D+   L++ + E+ EY +++VR++I+ + V  +DKL   FK+G+ ++
Sbjct  469  KRQRIAEMTDF---LNEQSCELEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGVEID  520

63) ES1_13620 in NC_021043


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  361 bits (1358),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 231/529 (44%), Positives = 360/529 (69%), Gaps = 19/529 (3%)

Query  12   IVIIPAKTQEEIKKAEKC---LKVAAYCRVSTDEEEQKNSYQAQIEYYTDKINKNPEWQM  68
            + +IPA  +   +K+      ++VAAYCRVSTD EEQ +SY+ QIE YT+ I+KN EW++
Sbjct  7    VTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWEL  66

Query  69   AGIFADEGITGTQAKKRPEFLKMIRLCRQGKIDVILTKSLSRFARNTVDSLNYIRELRTL  128
            AGIFAD+GITGT++KKR EF +MI  C  GKID+I+TKS+SRFARNT+D L+YIR+L+  
Sbjct  67   AGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDK  126

Query  129  GIAVISEKENINTLTAESEMLITIMSCFAQAESESISKNVAWGIRQSFKNGNVPMQYKKL  188
             IAV+ EKENINT+ + +E+++TIM+ +AQ ES+S+S+NV  GI+  +++G+V ++ K++
Sbjct  127  NIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRF  186

Query  189  LGYKKGADGNAEIVSDEAEIVKEIYRCYLDGASLNQIADMLNNRGLTTKGSNSPYRKEVI  248
            LGY K+ + +  I ++ AE+VK IYR YL+GASL QI+  L+  G+ T ++++  R E +
Sbjct  187  LGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETL  246

Query  249  QRILTNEKYTGDALLQKTYITDCITKKSRKNNGELPMYLVKNHHEPIISRTDFNRVQEEM  308
            ++IL NEKY GDALLQKTY  D ++KK  KNNG +P Y V N HEPII+R  F +VQEEM
Sbjct  247  KKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEM  306

Query  309  ARRSAKRSIAEKLTKTEQGKYSAKYALSELLICGECGSHYRRVTWTAKGFKEIKWRCINR  368
             RR+  R+      +     YS+KYALS ++ CG+CG  YRRV W  +G+K I WRC++R
Sbjct  307  VRRANLRGRKGGKKRV----YSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSR  362

Query  369  IQYGKKNCHSSPTIDEQALHKAIISAINEFCEVKDEVAKALRESITEVLDPNLNGSIQAA  428
            ++    +C ++PTI+E++L+ A++ AINE+   K+    +L+ +I+ V++ + + + +  
Sbjct  363  LEEKGSEC-TAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDI  421

Query  429  QQRIDELAHNIDELIKLATVPETAATAMADIEKFSEEMKTLREFIETEKAKQIAVQRGSA  488
            + +++EL +++  LI+        A +  D E  ++E+  LRE+ +   A +   +    
Sbjct  422  EGKLEELQQQL--LIQ--------AKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQ  471

Query  489  ELDAILKRLEKEDFTMTEYNDVAVRQLIEKVTVESKNVITVAFKGGLEI  537
             +  +   L+ +   + EY++  VR+LIEKVTV   + +TV FK+G+EI
Sbjct  472  RIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTV-FDDKLTVEFKSGVEI  519

64) TepiRe1_1004 in NC_019954


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 225/476 (48%), Positives = 345/476 (73%), Gaps = 28/476 (5%)

Query  13   GDDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQTIRKLKENNIAI  72
            +DDG ++TNTKKR++FN MIE+CMAGKIDM+ITKS+SRFARNT+D L+ IR+LK++NIA+
Sbjct  71   ADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAV  130

Query  73   FFEKEGVNTSESTGELLITILSSQAQEESRNLSENTKWGIVRRYENGIISVNHKKFMGYT  132
            FFEKE +NT +S GE+++TI++S AQ+ES++LS+N K GI  RY++G + VNHK+F+GYT
Sbjct  131  FFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYT  190

Query  133  KDKKSGELVILPEQAEIVRRIFRMYLEGNSILEITRALEADKIKTVTGKDKWYTGVIEKM  192
            KD +  +LVI PE AE+V+RI+R YLEG S+L+I+R+LEAD I T +GK KW    + K+
Sbjct  191  KDENK-QLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKI  249

Query  193  LANEKYMGDALMQKTYTVDFLTKKRVKNNGIVPQYYIEDNHEAIIPKELFYKVQEEKARR  252
            L NEKY+GDAL+QKTYTVDFL+KKRVKNNGIVPQYY+E++HE+IIP+ELF +VQEE  RR
Sbjct  250  LQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRR  309

Query  253  ASL--NKSAITRkanklkkekskfsskYALTEILVCAECGHPYRRQTWSKYGQKSAVWRC  310
            A+L   K++  R           +SSKYAL+ I+ C++CG+ YRR  W++ G KS VWRC
Sbjct  310  ANLRGRKGGKKR----------VYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  311  ENRLKNGTKASCKHSPTLKEEPLHNTIMTAINNVVENNGDFIGAFRENVIRVIGGYSTKD  370
             +RL +   + C  +PT++EE L+ +++ AIN+++ N+  F+++++ N+  V+      +
Sbjct  360  VSRL-EEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDN  416

Query  371  IPTKYDEQIESLQKEMLTLIEENAKQGSVAEDFDDTYKRISDQINELKQAKLKLVREKKQ  430
                 + ++E LQ+++  LI+ ++K         + Y  ++D+I  L++ K + + E+ +
Sbjct  417  ATDDIEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENAE  465

Query  431  ADRYEQQLKEIDSTLKIVRPQVREFDEDLVRRLIKIIKVNKGEKLEIQFESGITME  486
             +   Q++ E+   L+    ++ E+DE+LVRRLI  + V  ++KL ++F SG+ ++
Sbjct  466  REGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGVEID  520

65) TepRe1_0923 in NC_015519


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 225/476 (48%), Positives = 345/476 (73%), Gaps = 28/476 (5%)

Query  13   GDDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQTIRKLKENNIAI  72
            +DDG ++TNTKKR++FN MIE+CMAGKIDM+ITKS+SRFARNT+D L+ IR+LK++NIA+
Sbjct  71   ADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAV  130

Query  73   FFEKEGVNTSESTGELLITILSSQAQEESRNLSENTKWGIVRRYENGIISVNHKKFMGYT  132
            FFEKE +NT +S GE+++TI++S AQ+ES++LS+N K GI  RY++G + VNHK+F+GYT
Sbjct  131  FFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYT  190

Query  133  KDKKSGELVILPEQAEIVRRIFRMYLEGNSILEITRALEADKIKTVTGKDKWYTGVIEKM  192
            KD +  +LVI PE AE+V+RI+R YLEG S+L+I+R+LEAD I T +GK KW    + K+
Sbjct  191  KDENK-QLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKI  249

Query  193  LANEKYMGDALMQKTYTVDFLTKKRVKNNGIVPQYYIEDNHEAIIPKELFYKVQEEKARR  252
            L NEKY+GDAL+QKTYTVDFL+KKRVKNNGIVPQYY+E++HE+IIP+ELF +VQEE  RR
Sbjct  250  LQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRR  309

Query  253  ASL--NKSAITRkanklkkekskfsskYALTEILVCAECGHPYRRQTWSKYGQKSAVWRC  310
            A+L   K++  R           +SSKYAL+ I+ C++CG+ YRR  W++ G KS VWRC
Sbjct  310  ANLRGRKGGKKR----------VYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  311  ENRLKNGTKASCKHSPTLKEEPLHNTIMTAINNVVENNGDFIGAFRENVIRVIGGYSTKD  370
             +RL +   + C  +PT++EE L+ +++ AIN+++ N+  F+++++ N+  V+      +
Sbjct  360  VSRL-EEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNE-ENDN  416

Query  371  IPTKYDEQIESLQKEMLTLIEENAKQGSVAEDFDDTYKRISDQINELKQAKLKLVREKKQ  430
                 + ++E LQ+++  LI+ ++K         + Y  ++D+I  L++ K + + E+ +
Sbjct  417  ATDDIEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENAE  465

Query  431  ADRYEQQLKEIDSTLKIVRPQVREFDEDLVRRLIKIIKVNKGEKLEIQFESGITME  486
             +   Q++ E+   L+    ++ E+DE+LVRRLI  + V  ++KL ++F SG+ ++
Sbjct  466  REGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGVEID  520

66) DCF50_p1382 in NC_018867


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  359 bits (1348),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 218/516 (43%), Positives = 359/516 (70%), Gaps = 20/516 (3%)

Query  6    KTVQVLQPIQRQDNPEDSLNMSKRKVCAYCRVSTDSDEQMESYNAQVSEYKKKITENPEW  65
            + V V+ +I+R +N   S + +K +V AYCRVSTDS+EQ  SY+ Q+ +Y + I  N EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  66   EFVDIYADAGISGTNVKHRLAFNRMIRDCENGKVDLVITKSISRFARNTVDCLKHVRELK  125
            E+ +I+AD GI+GTN K R  FNRMI +C  GK+D++ITKSISRFARNT+DCLK +R+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  126  NIGVEVFFEKENIYSFDSKMELVLTMLSSIAQEESRNISENTKWGLRKRFRDGVTVCNTE  185
            +  + VFFEKENI + DSK E++LT+++S+AQ+ES+++S+N K G++ R+++G    N  
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  186  RFLGYDKDESGNLIINEEQATIVRRIFREYLDGKGYAAIGRGLEVDGIITVAGKTKWWDS  245
            RFLGY KDE+ +L+I+ E A +V+RI+REYL+G +   I+RGLE DGI+T AGK+KW+  
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  246  SIRGILENEKYYGELLLQKTVTVDYLTKKRVDNDNIEPMYRIDNNHEPIISKEMFDLVQQ  305
            +++ IL+NEKY G+ LLQKT TVD+L+KKRV N+ I P Y ++N+HEPII++E+F  VQ+
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  306  ERKRRFEITRGRDEDRRK-YSNKYGFSGKLYCEKCGKTLKRRHWNV-GTKSEKIVWQCNS  363
            E  RR ++ RGR  ++++ YS+KY++S+ +YC  CG   +R HWN  G KS  IVW+C S
Sbjct  305  EMVRRANL-RGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKS--IVWRCVS  361

Query  364  YIQG-VKNCSAKAVDDATLKRAFIQLYNDMVVDKGSFFKVFLDNINKVMTKESKVSEINK  422
             ++    +C+A ++++ TL+ A ++  N+++ +K +F+  +  NI  V   E+  +  + 
Sbjct  362  RLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEND-NATDD  420

Query  423  VTESMGLLEQDLSELVQLKLRKQIDDKYFNKEYERITNELEKV-SIKKDNLERQHLDDVK  481
            +   +  L+Q+L  L+Q K +         ++YE +++E+ ++  +K++ L  +   + K
Sbjct  421  IEGKLEELQQQL--LIQAKSK---------NDYEDVADEIYRLRELKQNALAENAEREGK  469

Query  482  YKEKLAAISKIVDNGDEPLVEFDDDFFIALVDKVII  517
             ++++A ++ ++++    L E+D+++   L++KV +
Sbjct  470  -RQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTV  504

67) Closa_2757 in NC_014376


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  349 bits (1310),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 210/426 (50%), Positives = 310/426 (73%), Gaps = 8/426 (1%)

Query  4    KDITIIPPDPKYDSHIRIEHKT-LNVAAYCRVSTRFEQQENSYDAQIAYYTRKIGMNKSW  62
            +++T+IP+  + +++   E K  + VAAYCRVST  E+Q +SY+ QI  YT  I  NK W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  63   NCAGIYADEGKAATGTKFRDSFNDMIEDCYAGKIDLILTKSISRFARNTVDCLRIIRELK  122
            + AGI+AD+G ++T TK R+ FN MIE+C AGKID+I+TKSISRFARNT+DCL+ IR+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  123  ERQIRILFEKENIDTMDNTGELLITILSSQAQEESRNLSENTRWGIIRKFEQGIVQVNHK  182
            +++I ++FEKENI+TMD+ GE+++TI++S AQ+ES++LS+N + GI  +++QG VQVNHK
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  183  KFMGYTKNEDEKLIIIPEEAAVVKRIFDLYLQGLGTYKIARVLESEGIRTTTGKEKWHHE  242
            +F+GYTK+E+ +L+I PE A VVKRI+  YL+G +  +I+R LE++GI T++GK KW+ E
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  243  TIYKMLQCEKYMGDAILQKTYTIDFLTKKKVMNNGYVKKYYVRNSHEAIITKEQFYLVQE  302
            T+ K+LQ EKY+GDA+LQKTYT+DFL+KK+V NNG V +YYV NSHE+II +E F  VQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  303  EMKRRSCASER-STRKR-YSSAYPLSGLIICGKCSGTYNRVSWQNKSGKSFVWRCRERLK  360
            EM RR+    R + +KR YSS Y+LS+++ CG C++ Y RV W+N++ KS+VWRC  RL 
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364

Query  361  AGTVQCKQSATIRESEMMKLLSKLFNTIIKTDPADSTVYLIKTKAVLIVNLGDKGEFNDD  420
                +C  ++TI E  +   + K +N ++    A+   +L   K  +   + +  +   D
Sbjct  365  EKGSECT-APTINEETLQTAVVKAINELL----ANKEPFLSTLKKNIATVFNEENDNATD  419

Query  421  DLTKQL  426
            D+  +L
Sbjct  420  DIEGKL  425

68) Dtox_1527 in NC_013216


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 196/381 (52%), Positives = 296/381 (78%), Gaps = 4/381 (1%)

Query  1    MKKKLTIIPTQER--HDQSIQAKTVCLRVAAYCRVSTVYERQENSYDAQVACYMDKIANN  58
            + +++T+IP+  R  ++++ ++K   +RVAAYCRVST  E Q +SY+ Q+  Y + I +N
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPK-IRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  59   PDWVLAGIYSDNGRSATNTKKRDDFNALIDDCAAGKIDLVITKSVSRFARNTVDSLLFIR  118
             +W LAGI++D+G ++TNTKKR++FN +I++C AGKID++ITKS+SRFARNT+D L +IR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  119  KLKEMNIGVIFEKEGINTLESTGELLITVLSGQAQEESRNISENTRWGIVRQFEKGVFHV  178
            +LK+ NI+V+FEKE INT++S GE+++T++++ AQ+ES+++S+N + GI  ++++G  +V
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  179  NYKKFMGYTMDENGQLIIVPEEAEIVRMIFQLYMEGRSYIQICQALENSGIKTVTGNSKW  238
            N K+F+GYT DEN QL+I PE AE+V+ I++ Y+EG S +QI ++LE  GI T +G++KW
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  239  RDSTLIKMLSNEKYMGDALLQKTYTINFLTKKRVVNKGIVPQYYVKNNHEAIIPADLFQS  298
            R  TL K+L NEKY+GDALLQKTYT++FL+KKRV N+GIVPQYYV N+HE+IIP +LF  
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  299  VQDEKLRRINMSCGESALKQKYSALYAISNIMICGECGYPYRRVTRARRGKSKVVWRCKN  358
            VQ+E +RR N+    ++ K+ YS+ YA+S+I+ CG+CG  YRRV +  RG   +VWRC +
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361

Query  359  RLMNGNRFCTNSPTLDEGTLH  379
            RL +    CT +PT++E TL+
Sbjct  362  RLEEKGSECT-APTINEETLQ  381

69) Rumal_3915 in NC_014825


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  343 bits (1286),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 228/542 (43%), Positives = 369/542 (69%), Gaps = 24/542 (4%)

Query  6    DMASNVTMIPAL---SPAELKQSKYRQIRVAAYCRVSTDSEEQANSYQVQIEYYTNLINS  62
             ++ NVT+IPA+   +     +SK  +IRVAAYCRVSTDSEEQA+SY++QIE YTN I+ 
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESK-PKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  63   NPEWTLAGIFADEGISGTQTKNRKQFNKMIRKCQQKKIDLVLCKSISRFARNTVDCLEYI  122
            N EW LAGIFAD+GI+GT+TK+R +FN+MI  C   KID+++ KSISRFARNT+DCL YI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  123  RELRLLGIGVIFEKENINTMMMNSEFIISLYGSFAQAESESISKNVSWGIEKSFREGKVK  182
            R+L+   I+V+FEKENINTM  ++E+++++ +S+AQ ES+S+S+NV  GI+  +++G V+
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  183  YVLDKTLGYRMGEDGVPyiveeeaeivrriyvMFLDGMSMQGIADQLQSEGIKRRSGSST  242
                + LGY  +E+    I  E AE+V+RIY  +L+G S+  I+  L+++GI   +G + 
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  243  WNRANVNFILKNEKYAGDAILQKSYTIDCITHKRVKNNGEKNKYIVHDCHPAIIDRDTYN  302
            W    ++ IL+NEKY GDA+LQK+YT+D ++ KRVKNNG   +Y V++ H +II R+ + 
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  303  RVQQELAKRGAIK-KRSAKARTELGQYSSKYALTDILICGECGTAYRRVTWTSHGHKRIV  361
            +VQ+E+ +R+ ++ ++++K R     YSSKYAL+ I+ CG+CG  YRRV W ++G K IV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRV----YSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIV  356

Query  362  WRCISRLDHGSKYCKHSPSISEESLQNAIVKALNAVYSRNGDMLARMEQNILAVIGDNGD  421
            WRC+SRL++ +  C  +P+I+EE+LQ A+VKA+N + + +   L+ + +NI +V+ ++ D
Sbjct  357  WRCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEND  415

Query  422  MQKQTAKIQKRLEEIEDERDSLVRQITSGAVDEDALDKNFESLNDEEAYLKTQLDDMQTK  481
              + T  I+ +LEE++++   L+ Q  S         +++E + DE   L+   ++  + 
Sbjct  416  --NATDDIEGKLEELQQQ---LLIQAKS--------KNDYEDVADEIYRLRELKQNALAE  462

Query  482  AKLSDEKKYALMAVGEELRRHDCHLAEYDDVTVRKVIEVIRVLSKNEVQIIFKDGHEMNV  541
                + K+  +  + + L  + C+L EYD+  VR++IE + V+  + + + FK G E+++
Sbjct  463  NAEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEIDI  521

Query  542  AV  543
             +
Sbjct  522  EI  523

70) Rumal_2253 in NC_014833


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  343 bits (1286),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 228/542 (43%), Positives = 369/542 (69%), Gaps = 24/542 (4%)

Query  6    DMASNVTMIPAL---SPAELKQSKYRQIRVAAYCRVSTDSEEQANSYQVQIEYYTNLINS  62
             ++ NVT+IPA+   +     +SK  +IRVAAYCRVSTDSEEQA+SY++QIE YTN I+ 
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESK-PKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKK  60

Query  63   NPEWTLAGIFADEGISGTQTKNRKQFNKMIRKCQQKKIDLVLCKSISRFARNTVDCLEYI  122
            N EW LAGIFAD+GI+GT+TK+R +FN+MI  C   KID+++ KSISRFARNT+DCL YI
Sbjct  61   NKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYI  120

Query  123  RELRLLGIGVIFEKENINTMMMNSEFIISLYGSFAQAESESISKNVSWGIEKSFREGKVK  182
            R+L+   I+V+FEKENINTM  ++E+++++ +S+AQ ES+S+S+NV  GI+  +++G V+
Sbjct  121  RQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQ  180

Query  183  YVLDKTLGYRMGEDGVPyiveeeaeivrriyvMFLDGMSMQGIADQLQSEGIKRRSGSST  242
                + LGY  +E+    I  E AE+V+RIY  +L+G S+  I+  L+++GI   +G + 
Sbjct  181  VNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAK  240

Query  243  WNRANVNFILKNEKYAGDAILQKSYTIDCITHKRVKNNGEKNKYIVHDCHPAIIDRDTYN  302
            W    ++ IL+NEKY GDA+LQK+YT+D ++ KRVKNNG   +Y V++ H +II R+ + 
Sbjct  241  WRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFM  300

Query  303  RVQQELAKRGAIK-KRSAKARTELGQYSSKYALTDILICGECGTAYRRVTWTSHGHKRIV  361
            +VQ+E+ +R+ ++ ++++K R     YSSKYAL+ I+ CG+CG  YRRV W ++G K IV
Sbjct  301  QVQEEMVRRANLRGRKGGKKRV----YSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIV  356

Query  362  WRCISRLDHGSKYCKHSPSISEESLQNAIVKALNAVYSRNGDMLARMEQNILAVIGDNGD  421
            WRC+SRL++ +  C  +P+I+EE+LQ A+VKA+N + + +   L+ + +NI +V+ ++ D
Sbjct  357  WRCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEND  415

Query  422  MQKQTAKIQKRLEEIEDERDSLVRQITSGAVDEDALDKNFESLNDEEAYLKTQLDDMQTK  481
              + T  I+ +LEE++++   L+ Q  S         +++E + DE   L+   ++  + 
Sbjct  416  --NATDDIEGKLEELQQQ---LLIQAKS--------KNDYEDVADEIYRLRELKQNALAE  462

Query  482  AKLSDEKKYALMAVGEELRRHDCHLAEYDDVTVRKVIEVIRVLSKNEVQIIFKDGHEMNV  541
                + K+  +  + + L  + C+L EYD+  VR++IE + V+  + + + FK G E+++
Sbjct  463  NAEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEIDI  521

Query  542  AV  543
             +
Sbjct  522  EI  523

71) Dhaf_2440 in NC_011830


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  342 bits (1283),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 226/536 (43%), Positives = 351/536 (66%), Gaps = 20/536 (3%)

Query  4    TATRKVTVIPADPIYAQKDIR--KKTLRVAPYCRVSTNSEEQLDSYQAQIEYYTERIAAQ  61
            + +R+VTVIPA    +++     K  +RVA+YCRVST+SEEQ  SY+ QIE YT+ I  +
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  62   PEWTMVDMFADEGKTATSTKKRKDFLRMIKACEKGKVDLVITKSVSRFCRNTLDGLDYVR  121
             EW + ++FAD+G T+T+TKKR +F RMI  C  GK+D++ITKS+SRF RNTLD L Y+R
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  122  KLKRMGVGVFFEKENVNTLYMDNEMILTFMMSQAQAESESMSGNIRWGHRKNFKDGKVYY  181
            +LK   ++VFFEKEN+NT+    E++LT+M S AQ ES+S+S N++ G +  +++G V  
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  182  HYAGFLGYRKGEDDLPEIDPEEAEIVRRVFSRYLVGHSVSKIIADLEADGIKTVRGKEKW  241
            +   FLGY K+E+    IDPE AE+V+R++  YL G S+ +I  +LEADGI T  GK KW
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  242  NDGVIRGMLKNEKYIGDALLQKTFIADLFTRQSKKNNGELPQYYVENCHPAIIDKLTFQR  301
                ++ +L+NEKYIGDALLQKT+  D+++++  KNNG +PQYYVEN H +II +  F +
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  302  VQEEMARRSSLRKVSANAKTELAKYSGKYVLTELLSCGNCGSPYRRVTWTRPEGKKIVWR  361
            VQEEM RR++LR   +  K     YS+KY L+ ++ CG+CG  YRRV W     K IVWR
Sbjct  302  VQEEMVRRANLRGRKGGKKRV---YSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWR  358

Query  362  CINRLENGKKFCKDAPTLEESRIHAAVVSAMNEMFSLK-TMKSLLQDSILSALSGNSGET  420
            C++RLE+    C  APT++E  +++AVV A+NE+++ K    S L+ +I + ++ +++++
Sbjct  359  CVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNA  417

Query  421  SIAAIDSRLSELRARQYELLQFAASVGADSTQYDEDLNKVSMEFSALVSKRSELEKNQQG  480
            +   I+++L EL+ +   L+Q     +    +Y++  + +   +     K++ L  N + 
Sbjct  418  T-DDIEGKLEELQQQL--LIQ-----AKSKNDYEDVADEI---YRLRELKQNALAENAER  466

Query  481  IAQADKRAEQIAAELDKVDTGITCFDELTVRQLIGAIKVLDEDKLLIRFKDGTEIE  536
             ++ + R  +++  L+     +  +DE  VR+LI  + V+D DKL + FK G EI+
Sbjct  467  EGKRQ-RIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEID  520

72) Cthe_1700 in NC_009012


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  341 bits (1282),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 201/383 (53%), Positives = 283/383 (74%), Gaps = 4/383 (1%)

Query  1    MGAYCRVSTDQLEQLSSYEAQVAYYTSYITNHPDYEFGGIYADEGISGTNTKKREQFNKM  60
            ++AYCRVSTD  EQ SSYE Q+  YT+YI ++ + E++GI+AD+GI+GTNTKKRE+FN+M
Sbjct  30   VAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFNRM  89

Query  61   IEDCKAGKIDMIITKSISRFARNTLDTLNYVRQLKELGIGVIFEKENINTLDSKGEVLLT  120
            IE+C AGKIDMIITKSISRFARNTLD L+Y+RQLK+  I+V+FEKENINT+DSKGE++LT
Sbjct  90   IEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLT  149

Query  121  ILSSLAQDESRSISENSTWGIRRRFEQGKLHINHTKFLGYDKDEEGNLVINEKQAKIVRR  180
            I++SLAQ+ES+S+S+N   GI+ R++QG +++NH +FLGY KDE+ +LVI+   A +V+R
Sbjct  150  IMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKR  209

Query  181  IYKDYLDGKGANRIARELEEEGVPNWNGKPKWYESSIRKILSNEKYKGDALLQKTYTVDF  240
            IY++YL+G +  +I+R LE +G+    GK+KW   +++KIL NEKY GDALLQKTYTVDF
Sbjct  210  IYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVDF  269

Query  241  LTKKRAVNNGEVPMYYVEESHPAIIDKEIWEAVQLEMERRRAFAEKYNISKLDYATVDNP  300
            L+KKR  NNG VP YYVE+SH +II +E+   VQ EM RR  +  +    K  Y++   +
Sbjct  270  LSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVYSS-KYA  328

Query  301  FAGRVICGHCGSAFGRKVWNSTDERLRRVVWRCNKKYEVKGKKSCENKHIDDKVLYHAFV  360
            +++ V CGHCG  + R  WN+ +   + +VWRC  + E KG   C    I++  L  A V
Sbjct  329  LSSIVYCGHCGDIYRRVHWNNRG--YKSIVWRCVSRLEEKG-SECTAPTINEETLQTAVV  385

Query  361  NTFNAMVENKEYFMEKWKEGLKS  383
            +++N ++ NKE F+   K  + +
Sbjct  386  KAINELLANKEPFLSTLKKNIAT  408


 Score = 28.5 bits (88),  Expect = 0.86, Method: Compositional matrix adjust.
 Identities = 19/56 (34%), Positives = 37/56 (67%), Gaps = 2/56 (3%)

Query  388  KRYKARQFIEILKDAKI-VEEFDVDMYFRIIEKMTVFDGKKIIVSLLDSTEIEVAI  442
            KR +  +  ++L++    +EE+D ++  R+IEK+TVFD+ K+ V +  + EI++ I
Sbjct  469  KRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDD-KLTVEFKSGVEIDIEI  523

73) OBV_44390 in NC_016048


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  341 bits (1279),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 234/541 (44%), Positives = 357/541 (66%), Gaps = 21/541 (3%)

Query  8    SVQKRVDVIPA--NILLTKPNARKRKLRVAAYCRVsteqeeqqssyaaqiayytEKINKN  65
            +V + V VIPA   +   K +  K K+RVAAYCRVST+ EEQ SSY  QI  YT+ I+KN
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  66   KDWELAGIFADEGITGTSAKKRTEFLKLMALCEKGKVDMVLTKSVSRFSRNTLDAIGYIR  125
            K+WELAGIFAD+GITGT++KKR EF +++  C  GK+DM++TKS+SRF+RNTLD + YIR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  126  KLKAKGIPIIFEKEGINTMEMASEMALCFLSGFAQAESESISRNVTWGKRQSFKSGKVPF  185
            +LK K I+++FEKE INTM+  +E+ L +++++AQ ES+S+S+NV  G +  ++ G V  
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  186  QYSRLLGYEKGEDGQPKVVPEEAEIVKRIFRNYYSGASVRKIKESLEADNILSPTGKQEW  245
            +  R+LGY K+E+ Q  + PE AE+VKRI+R+Y  GAS+ +I  +LEAD IL+++GK  W
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  246  SPGVIQYMLRNERYIGDALLQKTYVVDCLTKETRKNNGEIPQYYVTGNHEPIISKDLFNL  305
             P  ++ +L+NE+YIGDALLQKTY VD L+K   KNNG +PQYYV  +HEPII+++LF  
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  306  VQEEMarragkrkvakkavktekgkYSSKYALTELLCCGECGTQYRRVTWARNGKKKVVW  365
            VQEEM     +R   +      K  YSSKYAL+ ++ CG+CG  YRRV W   G K +VW
Sbjct  302  VQEEM----VRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVW  357

Query  366  RCINRLEYGTKYCKESPAIEESRLHQAIVTALNRLDKDKADVIETLKAGLRLAIGSQDDD  425
            RC++RLE     C  +P+I+E  L+ A+V A+N L  +K   + TLK  +   +  ++D+
Sbjct  358  RCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDN  416

Query  426  SFNEAAVQNRIAELQSVMMDLVELSSKSSAGADYFDVKFEEIAAEIKglqgqlgehqeqT  485
            + ++  ++ ++ ELQ  +  L++  SK+          +E++A EI  L+    +   + 
Sbjct  417  ATDD--IEGKLEELQQQL--LIQAKSKND---------YEDVADEIYRLRELKQNALAEN  463

Query  486  MLAQNTQARIHELLYMMENTDLSLKEYREDVVKAVTDKIVVLSPDRIRITFKGNTEMEQE  545
               +  + RI E+   +++    L EY E++V+ + +K+ V+  D++ + FK+  E++ E
Sbjct  464  AEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEIDIE  522

Query  546  L  546
            +
Sbjct  523  I  523

74) Bsel_2961 in NC_014219


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 195/399 (49%), Positives = 286/399 (72%), Gaps = 7/399 (1%)

Query  1    MGKTITVIPAKSRQSEDQTSVSKK--RVAAYCRVSTDHAEQLSSYEAQVKYYTDHIENHP  58
            +++ +TVIPA  R ++++TS SK   RVAAYCRVSTD  EQ SSYE Q+  YT+ I ++ 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  59   EYDLAGIYADEGISGTSTKKREQFNKMIEDCHQGKIDRIITKSISRFARNTLDCLNYVRQ  118
            E +LAGI+AD+GI+GT+TKKRE+FN+MIE+C  GKID IITKSISRFARNTLDCL+Y+RQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  119  LKDLGVGIIFEKENIDTLDAKGEVLLSILSSLAQDESRSISENASWGIRRRFESGQAQIN  178
            LKD  ++++FEKENI+T+D+KGE++L+I++SLAQ+ES+S+S+N   GI+ R++ G+ Q+N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  179  HARFLGYEKNTDGELTIVPSEAETVKRIYHDFLDGKGAVQIAEELKEEGIPGWNGESKWR  238
            H RFLGY K+ + +L I P  AE VKRIY+++L+G + +QI+  L  +GI    G +KWR
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  239  ASTIERMLENEEYKGDVLMQKTYTVDFLTRKRMKNEGELPMYLIEDNHPAIIERDTWEAV  298
            + T+ ++L+NE Y GD L+QKTYTVDFL++KR+KN+G +P Y +E++H +II R+    V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  299  QLEKQRRIAFVEETGSKKMTFNGDDYVFFGKVICGHCGSAFGRRTWHANDPNARRHVWLC  358
            Q E  RR  +    G+KK  +++  Y + + V CGHCG  + R  W  N+   +  VW C
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSS-KYALSSIVYCGHCGDIYRRVHW--NNRGYKSIVWRC  359

Query  359  KNRYVKGEKRCRVKNHHVNDLDLAPAFMQALKELLNQNN  397
             +R       C      +N+  L  A ++A++ELL +++
Sbjct  360  VSRLEEKGSEC--TAPTINEETLQTAVVKAINELLANKE  396

75) SAK_0764 in NC_007432


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  340 bits (1278),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 199/380 (53%), Positives = 283/380 (75%), Gaps = 6/380 (1%)

Query  6    THQQATKIRVAAYCRVSTDQDEQLSSYENQVSYYRDYILKHEDYELVDIYADEGISATNT  65
            T +   KIRVAAYCRVSTD +EQ SSYE Q+  Y +YI K+ + EL +I+AD+GI++TNT
Sbjct  21   TSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNT  80

Query  66   KKREAFNRLIQDCRAGKVDRILVKSISRFARNTLDCIKYVRELKELGIGVTFEKENIDSL  125
            KKRE FNR+I++C AGK+D I+ KSISRFARNTLDC+KY+R+LK+  I+V FEKENI+++
Sbjct  81   KKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTM  140

Query  126  DSKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEVRVNTTKFMGYDKDENGKLVIN  185
            DSKGE++LTI++SLAQ+ES+S+S+N   GI+ ++++GEV+VN  +F+GY KDEN +LVI+
Sbjct  141  DSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVID  200

Query  186  PEQAEVVKHIYHQFLKGYSPESIAKELNTNGIKGWSGKANWYPSSILKMLQNEKYKGDAL  245
            PE AEVVK+IY+++L G S   I++ L+++GI   +GKA+W P ++ K+LQNEKY GDAL
Sbjct  201  PEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDAL  260

Query  246  LQKTYTVDFLTKKRTENDGQVNQYYVTNNHEAIIDTEMWDTVQEELARRKDFREKH--KL  303
            LQKTYTVDFL+KKR  N+G V QYYV N+HE+II  E+   VQEE+ RR ++R +   K 
Sbjct  261  LQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKK  320

Query  304  KTYIMQSDDNPFTTKVFCAECGSAFGRKNWTTSRGKRKVWQCNNRYKVKGQIGCQNNHID  363
            + Y   S   ++++ V+C++CG  + R +W     K  VW+C +R   KG   C    I+
Sbjct  321  RVY---SSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGS-ECTAPTIN  376

Query  364  EEMLEKAFMKAVELLQEHRA  383
            EE L+ A +KA++ L  ++ 
Sbjct  377  EETLQTAVVKAINELLANKE  396

76) Bsel_2979 in NC_014219


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  338 bits (1269),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 195/399 (49%), Positives = 283/399 (71%), Gaps = 7/399 (1%)

Query  1    MGKTITVIPAKSRETEDQTTVHKK--RVAAYCRVSTDHAEQLSSYEAQVKYYTDHIENHP  58
            +++ +TVIPA  R  +++T+  K   RVAAYCRVSTD  EQ SSYE Q+  YT+ I ++ 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  59   EYDLAGIYADEGISGMSTKKREQFNKMIEDCHQGKIDRIITKSISRFARNTLDCLNYVRQ  118
            E +LAGI+AD+GI+G +TKKRE+FN+MIE+C  GKID IITKSISRFARNTLDCL+Y+RQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  119  LKDLGVGIIFEKENIDTLDAKGEVLLSILSSLAQDESRSISENASWGIRRRFESGQAQIN  178
            LKD  ++++FEKENI+T+D+KGE++L+I++SLAQ+ES+S+S+N   GI+ R++ G+ Q+N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  179  HARFLGYEKNSDGELSIVPSEAETVKRIYHDFLDGKGSVQIAEELKEEGIPGWNGESKWR  238
            H RFLGY K+ + +L I P  AE VKRIY+++L+G + +QI+  L  +GI    G +KWR
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  239  ASTIERMLENEKYKGDVLMQKTYTVDFLTRKRMKNEGELPMYLIEDNHPAIIERDTWEAV  298
            + T+ ++L+NEKY GD L+QKTYTVDFL++KR+KN+G +P Y +E++H +II R+    V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  299  QLEKQRRIAFVEETGSKKMTYNGDDYVFFGKVICGHCGSAFGRRTWHANDPNARRHVWLC  358
            Q E  RR  +    G+KK  Y++  Y + + V CGHCG  + R  W  N+   +  VW C
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSS-KYALSSIVYCGHCGDIYRRVHW--NNRGYKSIVWRC  359

Query  359  KNRYVKGEKRCRVKNHHVNDLDLAPAFMEALNELLRQNN  397
             +R       C      +N+  L  A + A+NELL +++
Sbjct  360  VSRLEEKGSEC--TAPTINEETLQTAVVKAINELLANKE  396


 Score = 26.9 bits (82),  Expect = 3.0, Method: Compositional matrix adjust.
 Identities = 13/27 (49%), Positives = 22/27 (82%), Gaps = 1/27 (3%)

Query  429  LSDYQPKLVRRFLERV-VIEDKETLRF  454
            L +Y+ +LVRR++E+V V++DK T+ F
Sbjct  487  LEEYDEQLVRRLIEKVTVFDDKLTVEF  513

77) SDSE_1359 in NC_019042


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  338 bits (1268),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 205/399 (52%), Positives = 297/399 (75%), Gaps = 4/399 (1%)

Query  1    MGKSITVIPA-KKVQTSVFHQVRKKIKVAAYCRVSTDQEEQLSSYENQVNYYREYISKHE  59
            +++++TVIPA K+V  +   + + KI+VAAYCRVSTD EEQ SSYE Q++ Y +YI K+ 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  60   DYELVDIYADEGISATNTKKRDAFNRLIQDCRAGKVDRILVKSISRFARNTLDCIKYVRE  119
            + EL +I+AD+GI++TNTKKR+ FNR+I++C AGK+D I+ KSISRFARNTLDC+KY+R+
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  120  LKELGVGVTFEKENIDSLDSKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEVRVN  179
            LK+  ++V FEKENI+++DSKGE++LTI++SLAQ+ES+S+S+N   GI+ ++++GEV+VN
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  180  TTKFMGYDKDENGRLIINPQQAETVKFIYEKFLEGYSPESIAKYLNDNEIPGWTGKANWY  239
              +F+GY KDEN +L+I+P+ AE VK IY  +LEG S   I++ L+ + I   +GKA+W 
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  240  PSAIQKMLQNEKYKGDALLQKTFTVDFLTKKRVQNDGQVNQYYVENSHEAIIDKDTWELV  299
            P +++K+LQNEKY GDALLQKT+TVDFL+KKRV+N+G V QYYVENSHE+II ++    V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  300  QLELARRKAYREEHQLKSYIMQNDDNPFTTKVFCKECGSAYGRKNWTTSRGKRKVWQCNN  359
            Q E+ RR   R     K  +  +   ++++ V+C +CG  Y R +W     K  VW+C +
Sbjct  303  QEEMVRRANLRGRKGGKKRVY-SSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361

Query  360  RYRVKGQSGCQNNHIDEETLEKAVVMAV-ELLSENVDLL  397
            R   KG S C    I+EETL+ AVV A+ ELL+++  +L
Sbjct  362  RLEEKG-SECTAPTINEETLQTAVVKAINELLANKEPFL  399

78) Desdi_1761 in NC_019903


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  338 bits (1267),  Expect = 8e-94, Method: Compositional matrix adjust.
 Identities = 227/508 (45%), Positives = 350/508 (69%), Gaps = 18/508 (3%)

Query  33   AAYCRVSTNQEEQLTSYEAQMAYYTDKIMTNPEWTMAGIFADEGITGTSAKKRPEFLRMI  92
            AAYCRVST+ EEQ +SYE Q+  YT+ I  N EW +AGIFAD+GITGT++KKR EF RMI
Sbjct  31   AAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFNRMI  90

Query  93   RLCKRGKIDVILTKSISRFARNTVDCLNYIRELKELGIPVIFEKENINTMKADSEIIITM  152
              C  GKID+I+TKSISRFARNT+DCL+YIR+LK+  I+V+FEKENINTM + +EI++T+
Sbjct  91   EECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLTI  150

Query  153  LGGFAQAESESISQNVRWGKRQSFKSGKVSFQYSRIYGYERGEDDRPHVIPEQAEVVKRI  212
            ++++AQ ES+S+SQNV+ G +  ++ G V  +  R+ GY ++E+ +  + PE AEVVKRI
Sbjct  151  MASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKRI  210

Query  213  FENYLAGMSVANIKKMLEADGISAAGGKPLWSEGALQYLLRNEKYCGDALLQKTYIENCI  272
            + +YL G S+ +I + LEADGI +A+GK+ W   +L+ +L+NEKY GDALLQKTY  + +
Sbjct  211  YREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVDFL  270

Query  273  SKKIKKNNGELPKYLVKDHHEAIIGRPLFELVQAEIARRAGKRkvsdktsktqqskyssR  332
            SKK  KNNG +P+Y V + HE+II R LF  VQ E+ RRA  R         ++  YSS+
Sbjct  271  SKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLR----GRKGGKKRVYSSK  326

Query  333  YAMTELLVCGDCGSAFRRVTWAKRGKKKVVWRCISRLDYGTKYCQNSPTIeeealhaall  392
            YA++ ++ CG+CG  +RRV W +RG K +VWRC+SRL+     C  +PTI+EE+L++A++
Sbjct  327  YALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSEC-TAPTINEETLQTAVV  385

Query  393  DAINKAMENREQLIGILKSNLEITLSEKNCEEVNPLLLESRIRELQKTMMELVAVSVKAG  452
             AIN  + N+E +++ LK N+   ++E N +  +   +E+++ ELQ+ ++      ++A 
Sbjct  386  KAINELLANKEPFLSTLKKNIATVFNEENDNATDD--IEGKLEELQQQLL------IQAK  437

Query  453  NARSYEDKFKEISEEIQSLQKALESHKAQQNGPDALTLQIEDLCRTLQDAPFECTEYKDS  512
            +   YED    +++EI  L+   ++  A++   ++   +I ++   L++ + E  EY + 
Sbjct  438  SKNDYED----VADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQSCELEEYDEQ  493

Query  513  VVRQLIDTIKVMSEDKLLIIFKGGFKME  540
            +VR+LI+ + V  +DKL + FK+G  ++
Sbjct  494  LVRRLIEKVTVF-DDKLTVEFKSGVEID  520

79) Bsel_2989 in NC_014219


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  336 bits (1261),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 190/399 (48%), Positives = 287/399 (72%), Gaps = 7/399 (1%)

Query  1    MAKTITVIPAKHKGSEGQSTVAKK--RVAAYCRVSTDHAEQLSSYEAQVNYYTDHIENHP  58
            +++ +TVIPA  + ++ +++ +K   RVAAYCRVSTD  EQ SSYE Q++ YT+ I ++ 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  59   EYDLAGIYADEGISGTSTKKREQFNKMIEDCHQGKIDRIITKSISRFARNTLDCLNYVRQ  118
            E +LAGI+AD+GI+GT+TKKRE+FN+MIE+C  GKID IITKSISRFARNTLDCL+Y+RQ
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  119  LKDLGVGIIFEKENIDTLDAKGEVLLSILSSLAQDESRSISENASWGIRRRFESGQAQIN  178
            LKD  ++++FEKENI+T+D+KGE++L+I++SLAQ+ES+S+S+N   GI+ R++ G+ Q+N
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  179  HARFLGYEKNSDGELIIIESEADTVKRIYYDFLDGKGSVQIAEELKEEGVPGWNGESKWR  238
            H RFLGY K+ + +L+I    A+ VKRIY ++L+G + +QI+  L  +G+    G +KWR
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  239  ASTIERMLENEKYKGDVLMQKTYTVDFLTRKRMKNEGELPMYLIEDNHPAIIERDTWEAV  298
            + T+ ++L+NEKY GD L+QKTYTVDFL++KR+KN+G +P Y +E++H +II R+    V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  299  QLEKQRRIAFVEETGSKKMTYNGDDYVFFGKVICGHCDSAFGRRTWHANDPNARRHVWLC  358
            Q E  RR  +    G+KK  Y++  Y + + V CGHC+  + R  W  N+   +  VW C
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSS-KYALSSIVYCGHCGDIYRRVHW--NNRGYKSIVWRC  359

Query  359  KNRYVKGENRCRVKNHHVNDLDLAPAFMEALNELLSQNN  397
             +R     + C      +N+  L  A + A+NELL++++
Sbjct  360  VSRLEEKGSEC--TAPTINEETLQTAVVKAINELLANKE  396

80) SANR_0787 in NC_022239


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  334 bits (1254),  Expect = 7e-93, Method: Compositional matrix adjust.
 Identities = 197/398 (50%), Positives = 292/398 (74%), Gaps = 7/398 (1%)

Query  1    MAKNITVIPAKKTIQVEQK-QHIQKIRMAAYCRVSTDQDEQLSSYENQVRYYQDYIRQNT  59
            +++N+TVIPA K +  ++  +   KIR+AAYCRVSTD +EQ SSYE Q+  Y +YI++N 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  60   LYELVDIYADEGISGTNTKKRTEFNRLIADCRKGKVDRIIVKSISRFSRNTLDCLKYVRE  119
              EL +I+AD+GI+GTNTKKR EFNR+I +C  GK+D II KSISRF+RNTLDCLKY+R+
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  120  LKELGIGVTFEKENIDSLDAKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEIRVD  179
            LK+  I+V FEKENI+++D+KGE++LTI++SLAQ+ES+S+S+N   GI+ ++++GE++V+
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  180  TTKFVGYDKGENGNLVINEEQAKIVRRIFRDFLQGETPESIARSLKEEGVPGWNGKVNWY  239
              +F+GY K+EN +LVI+ E A +V+RI+R++L+G +   I+R+L  +G+    GK +W 
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  240  PTTIQRMFQNEKYMGDALLQKTYTVDFLTKKRSENQGQVNQYYIEGNHEAIIDKEEWEFV  299
            P T+++++QNEKY+GDALLQKTYTVDFL+KKR  N+G V QYY+E +HE+II +E    V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  300  QLEIERRNRF--RQDNHINFYIIQCEQNPFTCKVFCKECGSLFGRKNWTTSRGKRPVWQC  357
            Q E+ RR  +  R++     Y     + +++  V+C +CG ++ R +W     K  VW+C
Sbjct  303  QEEMVRRANLRGRKGGKKRVY---SSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRC  359

Query  358  NNRYKVKGIQGCTNRHIDEETLQQAFLRAIEFLQENKE  395
             +R   KG + CT   I+EETLQ A ++AI+ L  NKE
Sbjct  360  VSRLEEKGSE-CTAPTINEETLQTAVVKAINELLANKE  396

81) ES1_04570 in NC_021043


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  328 bits (1229),  Expect = 8e-91, Method: Compositional matrix adjust.
 Identities = 194/399 (49%), Positives = 280/399 (71%), Gaps = 10/399 (2%)

Query  1    MAKVVTTIPATLSRFTAASINSKKKRRVAAYARVSTDHEEQLTSYEAQVDYYTNYIKGRD  60
            +++ VT IPA        + +SK K RVAAY RVSTD EEQ +SYE Q++ YTNYIK   
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  61   DWEFVGVYTDEGITGTNTKKREGFKRMVADALAGKIDLIITKSVSRFARNTVDSLTTIRS  120
            +WE+ G+++D+GITGTNTKKRE F+RM+ + +AGKID+IITKS+SRFARNT+D L  IR 
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  121  LKEHNVECYFEKENIWTFDGKGELLLTIMSSLAQEESRSISENCTWGQRKRFADGKVTVP  180
            LK+ N+  +FEKENI T D+KGE++LTIM+SLAQ+ES+S+S+N   G + R+ +G V V 
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  181  FKRFLGYDMGPDHNLVINPEQAKLVKRIYGMFLQGQSPFQIARILTEEGILSPGGKNHWN  240
             KRFLGY  + + +LVI+PE A +VKRIY  +L+G S +QI+R L  +GIL+++GK  W 
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  241  PSNIKSILTNEKYKGDALLQKSFTVDFLTTKKKANEGEIPQYYVKDNHEAIIDPETFEMV  300
            P  +K IL NEKY GDALLQK++TVDFL+ K+  N+G +PQYYV ++HE+II  E F  V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  301  QTLMATRKRGWNRkssvs-------ifsskikCGDCGSWYGPKVWHSNDAYRKTIWQCNH  353
            Q  M  R   + RK++          +SS + CG+CG  Y    W++  +Y+  +W+C  
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNR-GYKSIVWRCVS  361

Query  354  KFD--GQKCATPTLTEEEIKELFLRAANQVIDQKDQFIS  390
            +++  G  C++PT+ EE ++   ++A N+++ +K+ F+S
Sbjct  362  RLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLS  400

82) HMPREF0573_11203 in NC_014246


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  326 bits (1223),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 185/392 (48%), Positives = 277/392 (71%), Gaps = 13/392 (3%)

Query  4    ITTIPATKPLHSTTTTISGQQLRRVAGYARVSTDDTDQANSYEAQVDYYEHYIKNHDGWQ  63
            +T IPA K + +  T+ S  ++R VA+Y RVSTD  +QA+SYE Q++ Y +YIK++  W+
Sbjct  7    VTVIPAIKRVGNNKTSESKPKIR-VAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWE  65

Query  64   FVAIYTDEGISGTSTKHREGFNRMIADALSGRIDLIVTKSVSRFARNTVDSLTTVRKLKD  123
            + +I++D+GI+GT+TK RE FNRMI + ++G+ID+I+TKS+SRFARNT+D L  +R+LKD
Sbjct  66   LAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKD  125

Query  124  KGVEVFFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGHRKRFQDGKVYMPYGN  183
            K + VFFEKENI T+DSKGE+++TIM+SLAQ+ES+S+S+NV  G + R+Q+G V +    
Sbjct  126  KNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKR  185

Query  184  FLGYDRGENGEPVINPEQAETVRRIYRQYLEGMSIPQIAASLDADGILTPRRKHKWSHTT  243
            FLGY ++EN + VI+PE AE V+RIYR+YLEG S+ QI+ +L+ADGILT+  K KW   T
Sbjct  186  FLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPET  245

Query  244  IHSILTNEKYKGDALLQKRFTVDFLTKQRKANEGEVPQYYVTGSHPAIIDPETWELVHYE  303
            +  IL NEKY GDALLQK +TVDFL+K+R  N+G VPQYYV  SH +II  E    V+ E
Sbjct  246  LKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEE  305

Query  304  LAKNTN----QGRRERAF------TGMVYCTHCGSAYGSKTWHSTDKYRAIIWQCNHKFS  353
            + + +N    +G + R +      +++VYC HCG  Y    W++ + Y++I+W+C  ++ 
Sbjct  306  MVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVSRLE  364

Query  354  TPHPA-KMPILRDNQLQTIFQTALAQIIEQRG  384
               +    P + ++ LQT    A+ +++ ++ 
Sbjct  365  EKGSECTAPTINEETLQTAVVKAINELLANKE  396

83) CXIVA_07110 in NC_015737


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  322 bits (1207),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 223/534 (42%), Positives = 354/534 (67%), Gaps = 26/534 (4%)

Query  1    MSRQVKKIPATISRFTAAPINSKTKRRVAGYARVSTDHEDQTTSYAAQVDYYTNYIKGHE  60
            +SR+V  IPA          +SK K RVA+Y RVSTD E+Q++SY  Q++ YTNYIK + 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  61   DWEFAGIYTDEGISATNTKKREGFRHMISDALDGKIDLIVTKSVSRFARNTVDSLTTIRE  120
            +WE+AGI++D+GI++TNTKKRE F +MI + + GKID+I+TKS+SRFARNT+D L  IR+
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  121  LKEKGVECYFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGQRKRMADGKVSFA  180
            LK+K +  +FEKENI T+DSKGE+++TIM+SLAQ+ES+S+S+NV  G + R  +G V   
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  181  YSRFLGLDKDKETGKIVVNQEQAKTVRLIFRLFLEGLTPNAIAKELTNRGIKTPSGKDVW  240
              RFLG  KD E  ++V++ E A  V+ I+R +LEG +   I++ L   GI T++GK  W
Sbjct  183  HKRFLGYTKD-ENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  241  NQSTVRRMLSNEKYKGDALLQKEFTVDFLQKKMKKNEGEVPQYYVEGNHEAIISPQVFDL  300
               T++++L NEKY GDALLQK +TVDFL KK  KN+G VPQYYVE +HE+II+ ++F  
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  301  VQTELERRKHGRSR-------YSGISIFSSKIKCADCGGWYGSKVWHSRDKYRKEVYRCN  353
            VQ E+ RR + R+R       YS+   +SS + C++CG+ Y    W++R+ Y+  V RC 
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCV  360

Query  354  SKYE--GEKCQTPFVTKEDVKAAFVSAYNKLVKEKKEILANAQLIRKTLCDTGSLQEEKN  411
            S+ E  G  C +P +  E +++A V A N L+ +K  +L+    ++K +  +  ++EE++
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLST---LKKNI--ATVFNEEND  415

Query  412  RLENELSV-IVEMTDSLVAENARIAQNQNDYQKKYDDLVRRYDEKKQRYDEVTDRIRKKE  470
               +++   + E+ + L+ +    A+++NDY+   D++ R  + K++   E ++R  K++
Sbjct  416  NATDDIEGKLEELQQQLLIQ----AKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQ  471

Query  471  TQSERLAEFIRELKSRKGVIAEFDDALWGSMVEYVTVHRDGKISVTFRNGTEIE  524
              +E +++F   L+ +   + E+D+ L   ++E VTV  D+K++V F++G EI+
Sbjct  472  RIAE-MTDF---LNEQSCELEEYDEQLVRRLIEKVTVF-DDKLTVEFKSGVEID  520

84) Closa_3176 in NC_014376


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  321 bits (1204),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 228/541 (43%), Positives = 344/541 (64%), Gaps = 21/541 (3%)

Query  8    PIQKKVDVIPA--NILLTKPNARKRKLRVAAYCRVsteqeeqqssyaaqiayytDKISKN  65
            ++ ++V VIPA   +   K +  K K+RVAAYCRVST+ EEQ SSY  QI  YT+ I KN
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  66   KDWELAGIFADEGITGTSAKKRTEFLKLMALCEKGKIDMVLTKSVSRFSRNTLDAIGYIR  125
            K+WELAGIFAD+GITGT++KKR EF +++  C  GKIDM++TKS+SRF+RNTLD + YIR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  126  KLKAKGIPIIFEKEGINTMEMASEMALCFLSGFAQAESESISRNVTWGKRQSFKSGKVPF  185
            +LK K I+++FEKE INTM+  +E+ L +++++AQ ES+S+S+NV  G +  ++ G V  
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  186  QYSRLLGYEKGEDGQPKIVPDEAEIVKRIFRSYYSGASVRTIKESLEADNILSPTGKQEW  245
            +  R+LGY K+E+ Q  I P+ AE+VKRI+R Y  GAS+  I  +LEAD IL+++GK  W
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  246  SVGVLQYMLRNERYIGDALLQKTYVADCLTKETRKNNGEIPQYYVTGNHEPIISKDLFNL  305
                L+ +L+NE+YIGDALLQKTY  D L+K   KNNG +PQYYV  +HEPII+++LF  
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  306  VQEEIarragkrkvakkavktekgkYSSKYALTELLCCGDCGTQYRRVTWARNGKKKVVW  365
            VQEE+     +R   +      K  YSSKYAL+ ++ CG+CG  YRRV W   G K +VW
Sbjct  302  VQEEM----VRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVW  357

Query  366  RCINRLEYGTKYCKESPTIEESRLHQAIVTALNRLDEDKADVIETLKAGLRLAIGTQDDD  425
            RC++RLE     C  +PTI+E  L+ A+V A+N L  +K   + TLK  +   +  ++D+
Sbjct  358  RCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDN  416

Query  426  SFNEAAVKNRIAELQSVMMDLVELSSKSSAGadyfdaefeeiaaeiKglqgqlgehqeqT  485
            + ++  +  ++ ELQ  +  L++  SK+       +        +    +          
Sbjct  417  ATDD--IEGKLEELQQQL--LIQAKSKNDYEDVADEIYRLRELKQNALAENAER------  466

Query  486  MLAQNTQARIHELLYTLEHIDLSVKEYRDDVVKGIITKVVVLSTDRIRITFDNNMEMEQE  545
               +  + RI E+   L++    + EY +++V+ +I KV V+  D++ + F + +E++ E
Sbjct  467  ---EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEIDIE  522

Query  546  L  546
            +
Sbjct  523  I  523

85) Acin_1875 in NC_016077


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  320 bits (1200),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 213/531 (41%), Positives = 353/531 (67%), Gaps = 22/531 (4%)

Query  1    MAKTVRAIPATISRYTSSPINSRKKRKVAGYARVSTDHDDQITSYEAQVDYYTNYIKGRD  60
            +++ V  IPA      +   +S+ K +VA+Y RVSTD ++Q +SYE Q++ YTNYIK   
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  61   DWEFVGIYTDEGISGTNTRHRDGFKRMVNDALEGKIDLIITKSVSRFARNTVDSLSTIRK  120
            +WE+ GI++D+GI+GTNT+ R+ F+RM+++ + GKID+IITKS+SRFARNT+D L  IR+
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  121  LKEHKIECYFEKENIWTFDSKGELLLTIMSSLAQEESRSISENVTWGHRKRFADGKVSVA  180
            LK+ +I  +FEKENI T DSKGE++LTIM+SLAQ+ES+S+S+NV  G + R+ +G V V 
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  181  YSRFLGYKKGPNGGLVVVPEEATTIKLIYKLFLEGLGTTTIAKQLTKRGLKTPGGKSKWS  240
              RFLGY K+ N  LV+ PE A  +K IY+ +LEG +   I++ L   G+ T++GK+KW 
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  241  ARTVYSILQNEKYKGDALLQKSYTVDFLTKKTKINEGEVPQYYVEHDHEAIIEPQTFEMV  300
            + T+  ILQNEKY GDALLQK+YTVDFL+KK   N+G VPQYYVE+ HE+II  + F  V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  301  QAELKHRNKAR-------KYFSGTSIFSTKIQCAECGGWYGAKVWHSNDKYRRIIYQCNN  353
            Q E+ +R + R       + +S+   +S+ + C++CG+ Y    W++ + Y+ I+ +C +
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVS  361

Query  354  KFRNK-TGCRTPHLTEEEIKAYFVRAMNQIIADKDEIIQTIEDARQVICDNGDLLAKRDA  412
            ++ +K + C +P + EE +++  V+A+N+++A+K+ ++ T+      + ++ +     +A
Sbjct  362  RLEEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEN----DNA  417

Query  413  MQKEIGILVEMAQNAVERNARVAQNQEEYQKQYDDIISRYDAMKTEYEQLCEKIENRQDR  472
             +   G L E+ Q+ + +    A+++++Y+   D+I  R   +K   + L E+ E R+++
Sbjct  418  TDDIEGKLEELQQQLLIQ----AKSKNDYEDVADEIY-RLRELKQ--NALAENAE-REGK  469

Query  473  NEQLGRFIQELKGRDSLLTEFDQSLWCVLVDKMVVKDKENVTVVFQDGTEI  523
             ++++   + L+ +   L E+D+ L   L++K+ V D +++TV F+ G EI
Sbjct  470  RQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEI  519

86) CKL_3840 in NC_009706


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  318 bits (1193),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 226/541 (42%), Positives = 343/541 (64%), Gaps = 21/541 (3%)

Query  8    PLQKRVDIIPA--NILLTKPNARKRKLRVAAYCRVsteqeeqqssyaaqiayytDKISKN  65
            ++ + V +IPA   +   K +  K K+RVAAYCRVST+ EEQ SSY  QI  YT+ I KN
Sbjct  2    AVSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKN  61

Query  66   KDWELAGIFADEGITGTSAKKRTEFLKLMVLCEKGKVDMVLTKSVSRFSRNTLDAIGYIR  125
            K+WELAGIFAD+GITGT++KKR EF +++  C  GK+DM++TKS+SRF+RNTLD + YIR
Sbjct  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121

Query  126  KLKAKGIPIIFEKEGINTMEMASEMALCFLSGFAQAESESISRNVTWGKRQSFKSGKVPF  185
            +LK K I+++FEKE INTM+  +E+ L +++++AQ ES+S+S+NV  G +  ++ G V  
Sbjct  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQV  181

Query  186  QYSRLLGYEKGEDGQPKIVPDEAEIVKRIFRSYYSGASVRTIKESLEADNILSPTGKQEW  245
            +  R+LGY K+E+ Q  I P+ AE+VKRI+R Y  GAS+  I  +LEAD IL+++GK  W
Sbjct  182  NHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKW  241

Query  246  SVGVLQYMLRNERYIGDALLQKTYVADCLTKETRKNNGEIPQYYVTGNHEPIISKDLFNL  305
                L+ +L+NE+YIGDALLQKTY  D L+K   KNNG +PQYYV  +HEPII+++LF  
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  306  VQEEIarragkrkvakkavktekgkYSSKYALTELLCCGDCGTQYRRVTWARNGKKKVVW  365
            VQEE+     +R   +      K  YSSKYAL+ ++ CG+CG  YRRV W   G K +VW
Sbjct  302  VQEEM----VRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVW  357

Query  366  RCINRLEYGTKYCKESPTIEESRLHQAIVTALNRLDEDKADVIETLKAGLRLAIGTQDDD  425
            RC++RLE     C  +PTI+E  L+ A+V A+N L  +K   + TLK  +   +  ++D+
Sbjct  358  RCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDN  416

Query  426  SFNEAAVKNRIAELQSVMMDLVELSSKSSAGadyfdaefeeiaaeiKglqgqlgehqeqT  485
            + ++  +  ++ ELQ  +  L++  SK+       +        +    +          
Sbjct  417  ATDD--IEGKLEELQQQL--LIQAKSKNDYEDVADEIYRLRELKQNALAENAER------  466

Query  486  MLAQNTQARIHELLYTLEHIDLSVKEYRDDVVKGIITKVVVLSTDRIRITFDNNMEMEQE  545
               +  + RI E+   L++    + EY +++V+ +I KV V+  D++ + F + +E++ E
Sbjct  467  ---EGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFD-DKLTVEFKSGVEIDIE  522

Query  546  L  546
            +
Sbjct  523  I  523

87) Rumal_3820 in NC_014825


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  317 bits (1189),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 215/536 (41%), Positives = 352/536 (66%), Gaps = 22/536 (4%)

Query  1    MSRPIEAASNVKIIPAMSSEELKQAKYRQTRVAAYCRVSTDHEEQANSYKVQIDYYTNLI  60
            +SR +   + +K +    + E K     + RVAAYCRVSTD EEQA+SY +QI+ YTN I
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKP----KIRVAAYCRVSTDSEEQASSYEIQIEHYTNYI  58

Query  61   NSNSEWTMAGIYADEGISGTQTKNRKEFNKMIRKCRQKKIDLVLCKSISRFARNTVDCLE  120
            + N EW +AGI+AD+GI+GT+TK+R EFN+MI  C   KID+++ KSISRFARNT+DCL 
Sbjct  59   KKNKEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLK  118

Query  121  YIRELRLLGIGVIFEKENINTLAMNSEFIISLYGSFAQAESESISKNVSWGIEKSFKEGK  180
            YIR+L+   I+V+FEKENINT+  ++E+++++ +S+AQ ES+S+S+NV  GI+  +++G 
Sbjct  119  YIRQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGE  178

Query  181  VKYVMDKTLGYRMGEDGKPyiveeeaeivrriyrMFLDGLSMQRIADIMQAEGAARRSGC  240
            V+    + LGY  +E+ +  I  E AE+V+RIYR +L+G S+ +I+  ++A+G    +G 
Sbjct  179  VQVNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGK  238

Query  241  TTWNRSNVNYILKNEKYAGDAILQKSYTIDCITHKRVKNNGEKNKYILHDCHPAIIDRDT  300
            + W    ++ IL+NEKY GDA+LQK+YT+D ++ KRVKNNG   +Y +++ H +II R+ 
Sbjct  239  AKWRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPREL  298

Query  301  YNRTQQELTRRCTIKQRSDKAVTAQGRYASKYALTDIMICGECGTPYRRVVWNSHGKKLP  360
            + + Q+E+ RR  ++ R +     +  Y+SKYAL+ I+ CG+CG  YRRV WN++G K  
Sbjct  299  FMQVQEEMVRRANLRGRKG---GKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSI  355

Query  361  VWRCINRLDHGNRYCKHSPSLNEEHLQQAIIDAINTAYTHNTAFLQSMENNISIVLNDED  420
            VWRC++RL++    C  +P++NEE LQ A++ AIN   +++ +FL ++ +NI+ V+N+E+
Sbjct  356  VWRCVSRLEEKGSECT-APTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEN  414

Query  421  KNNTERVRIESRLAEIDKARDDLIHLVTSGSVGEDSLDKEFEALNDEESYLKTQLEAMKS  480
             N T+   IE++L E+++      +L+  +        +++E + DE   L+   +   +
Sbjct  415  DNATD--DIEGKLEELQQ------QLLIQAKS-----KNDYEDVADEIYRLRELKQNALA  461

Query  481  QTEKRDEVRYSIMSAVEGIGEMENTMVDYDEVAVRKMIECIKVLSKTEILIIFKGG  536
            +   R+  R  I    + + E    + +YDE  VR++IE + V+    + + FK+G
Sbjct  462  ENAEREGKRQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTVFDDK-LTVEFKSG  516

88) CKR_3390 in NC_011837


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  307 bits (1150),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 217/513 (43%), Positives = 328/513 (64%), Gaps = 19/513 (3%)

Query  1    MAAYCRVsteqeeqqssyaaqiayytDKISKNKDWELAGIFADEGITGTSAKKRTEFLKL  60
            +AAYCRVST+ EEQ SSY  QI  YT+ I KNK+WELAGIFAD+GITGT++KKR EF ++
Sbjct  30   VAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFNRM  89

Query  61   MVLCEKGKVDMVLTKSVSRFSRNTLDAIGYIRKLKAKGIPIIFEKEGINTMEMASEMALC  120
            +  C  GK+DM++TKS+SRF+RNTLD + YIR+LK K I+++FEKE INTM+  +E+ L 
Sbjct  90   IEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLT  149

Query  121  FLSGFAQAESESISRNVTWGKRQSFKSGKVPFQYSRLLGYEKGEDGQPKIVPDEAEIVKR  180
            +++++AQ ES+S+S+NV  G +  ++ G V  +  R+LGY K+E+ Q  I P+ AE+VKR
Sbjct  150  IMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKR  209

Query  181  IFRSYYSGASVRTIKESLEADNILSPTGKQEWSVGVLQYMLRNERYIGDALLQKTYVADC  240
            I+R Y  GAS+  I  +LEAD IL+++GK  W    L+ +L+NE+YIGDALLQKTY  D 
Sbjct  210  IYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVDF  269

Query  241  LTKETRKNNGEIPQYYVTGNHEPIISKDLFNLVQEEIarragkrkvakkavktekgkYSS  300
            L+K   KNNG +PQYYV  +HEPII+++LF  VQEE+     +R   +      K  YSS
Sbjct  270  LSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEM----VRRANLRGRKGGKKRVYSS  325

Query  301  KYALTELLCCGDCGTQYRRVTWARNGKKKVVWRCINRLEYGTKYCKESPTIEESRLHQAI  360
            KYAL+ ++ CG+CG  YRRV W   G K +VWRC++RLE     C  +PTI+E  L+ A+
Sbjct  326  KYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECT-APTINEETLQTAV  384

Query  361  VTALNRLDEDKADVIETLKAGLRLAIGTQDDDSFNEAAVKNRIAELQSVMMDLVELSSKS  420
            V A+N L  +K   + TLK  +   +  ++D++ ++  +  ++ ELQ  +  L++  SK+
Sbjct  385  VKAINELLANKEPFLSTLKKNIATVFNEENDNATDD--IEGKLEELQQQL--LIQAKSKN  440

Query  421  SAGadyfdaefeeiaaeiKglqgqlgehqeqTMLAQNTQARIHELLYTLEHIDLSVKEYR  480
                   +        +    +             +  + RI E+   L++    + EY 
Sbjct  441  DYEDVADEIYRLRELKQNALAENAER---------EGKRQRIAEMTDFLNEQSCELEEYD  491

Query  481  DDVVKGIITKVVVLSTDRIRITFDNNMEMEQEL  513
            +++V+ +I KV V+  D++ + F + +E++ E+
Sbjct  492  EQLVRRLIEKVTVFD-DKLTVEFKSGVEIDIEI  523

89) SeseC_00920 in NC_017582


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  303 bits (1136),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 188/368 (52%), Positives = 267/368 (73%), Gaps = 3/368 (0%)

Query  1    MSTDQDEQLSSYENQVRYYRDYILKHEDYELVDIYADEGISATNTKKRDAFNRLIQDCRA  60
            +STD +EQ SSYE Q+  Y +YI K+ + EL +I+AD+GI++TNTKKR+ FNR+I++C A
Sbjct  36   VSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFNRMIEECMA  95

Query  61   GKVDRILVKSISRFARNTLDCIKYVRELKELGIGVTFEKENIDSLDSKGEVLLTILSSLA  120
            GK+D I+ KSISRFARNTLDC+KY+R+LK+  I+V FEKENI+++DSKGE++LTI++SLA
Sbjct  96   GKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLTIMASLA  155

Query  121  QDESRSISENSTWGIRKKFERGIVQVNTTKFMGYDKDENGRLVINPEQAEVVKYIYSQFL  180
            Q+ES+S+S+N   GI+ ++++G VQVN  +F+GY KDEN +LVI+PE AEVVK IY ++L
Sbjct  156  QQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKRIYREYL  215

Query  181  KGYSPESIAKELNAKDIKGWSGKANWYPSSILKMLQNEKYKGDALLQKTYTVDFLTKKRI  240
             G S   I++ L+A +I   +GKA+W P ++ K+LQNEKY GDALLQKTYTVDFL+KKR+
Sbjct  216  EGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYTVDFLSKKRV  275

Query  241  QNDGQVNQYYVEDSHEGIIDEETWETIQLEIARRKIYREEHQLKSYIMQSEDNPFTTKVY  300
            +N+G V QYYVE+SHE II  E    +Q E+ RR   R     K  +  S   ++++ VY
Sbjct  276  KNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVY-SSKYALSSIVY  334

Query  301  CKACGSAFGRKNWTTSRGKRKVWQCNNRYRIKGVEGCNSRHLDEATLEQIFIKAL-ELLS  359
            C  CG  + R +W     K  VW+C +R   KG E C +  ++E TL+   +KA+ ELL+
Sbjct  335  CGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSE-CTAPTINEETLQTAVVKAINELLA  393

Query  360  ENIDLLDG  367
            ++  +L  
Sbjct  394  NKEPFLST  401

90) CDHC02_1630 in NC_016802


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  302 bits (1131),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 168/388 (44%), Positives = 256/388 (66%), Gaps = 10/388 (2%)

Query  1    MARTVTAIPATRALHTGAPLGQTTLRRVAGYARVSTDHDDQVTSYEAQVDYYTRYISDHA  60
            ++R VT IPA + +            RVA+Y RVSTD ++Q +SYE Q++ YT YI  + 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  61   GWQFVKVYTDEGITGTSTKHRAGFQQMVTDALDGKIDLIITKSVSRFARNTVDSLTTVRA  120
             W++  +++D+GITGT+TK R  F++M+ + + GKID+IITKS+SRFARNT+D L  +R 
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  121  LKDKGVEVYFEKEGIWTFDAKGELLITIMSSLAQEEARSISENVTWGHRKRFADGKVTVP  180
            LKDK + V+FEKE I T D+KGE+++TIM+SLAQ+E++S+S+NV  G + R+ +G V V 
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  181  YSRFLGYDKGKDGSLVINPEQAKTVRRIYNMYLSGMSIGTIARTLTDEPETFTAAGNKTW  240
              RFLGY K+ +  LVI+PE A  V+RIY  YL G S+  I+R L  +   +TAAG+  W
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADG-ILTAAGKAKW  241

Query  241  HYQSIRAILTNEKYKGDALLQKSYIADYLTKRQVINQGEVPQYYVTASHEAIISPAVWDF  300
            + ++++ IL NEKY GDALLQK+Y  D+L+K++V N+G VPQYYV  SHE+II+  +   
Sbjct  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQ  301

Query  301  VQAEIAKGAR-DQRTQHRTRPFSSTFE------CSQCGHFFGSKTWHAGSKYEKVIWRCG  353
            VQ E+ + A    R   + R +SS +       C++CG+++    W+  + Y  ++WRC 
Sbjct  302  VQEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCV  360

Query  354  HKYAGQEK-CATGHISDQRLKDMFLKAI  380
             +   +   C++  I+++ L+   +KAI
Sbjct  361  SRLEEKGSECTAPTINEETLQTAVVKAI  388

91) Acin_1945 in NC_016077


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  302 bits (1130),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 210/516 (41%), Positives = 346/516 (68%), Gaps = 27/516 (5%)

Query  2    NSQKKRRVAGYARVSTDHDEQLTSYEAQVDYYTRYIQSRNDWEFVGIYTDEGISATNTKH  61
            +S+ K RVA+Y RVSTD +EQ +SYE Q++ YT YI+  ++WE+ GI++D+GI++TNTK 
Sbjct  23   ESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKK  82

Query  62   REGFKRMIADAIAGKIDLIITKSVSRFARNTVDSLTTVRKLKDKGIEIYFEKENIWTLDA  121
            RE F+RMI + +AGKID+IITKS+SRFARNT+D L  +R+LKDK I ++FEKENI T+D+
Sbjct  83   REEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDS  142

Query  122  KGELLITIMSSLAQEESRSISENVTWGHRKRFADGKVSLAFTHFLGYDKGMDGNLVVNKK  181
            KGE+++TIM+SLAQ+ES+S+S+NV  G + R+ +G V +   +FLGY K+ + +LV++  
Sbjct  143  KGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPE  202

Query  182  QAEIVKLIYRLYLNGYTFHSIAKELTERKIPTPAGCKIWRANTIRSILMNEKYKGDALLQ  241
             AE+VK IYR YL+G ++  I++ L    I T+AG   WR++T++ IL NEKY GDALLQ
Sbjct  203  GAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQ  262

Query  242  KKITVDFLTKETKKNEGEVPQYYVEHNHEAIISPQVFDWVQEEIkrrrk-------rkkr  294
            K  TVDFL+K   KN+G VPQYYVE++HE+II+ ++F  VQEE+ RR +       +K+ 
Sbjct  263  KTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRV  322

Query  295  YSGVSIFSSKIKCGQCGGWYGAKVWHSTDKYRRTIYRCNDKFKN---HCQTPHLTENEIK  351
            YS+   +SS + CG+CG+ Y    W++ + Y+  + RC  ++ +   +C +P + E+ ++
Sbjct  323  YSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVSRLEEKGSECTAPTINEETLQ  381

Query  352  GAFIRAVNQLIENKEDILSNITMLKKRLTDTASLEKERDALELDLNMLTDQVQQLIAENA  411
             A ++A+N+L+ NKE +LS    LKK ++   + E++  + +++   L +  QQL+ +  
Sbjct  382  TAVVKAINELLANKEPFLST---LKKNIATVFNEENDNATDDIE-GKLEELQQQLLIQ--  435

Query  412  QVAQDQDEYGRKYNGLVSRYEETKKKYDQVCDAIQQCVDRYW--KLDNFMKNLQKQNLVY  469
              A+ +++Y    + +   Y     K + + +  ++   R +   + +F+++ Q  +L  
Sbjct  436  --AKSKNDYEDVADEI---YRLRELKQNALAENAEREGKRQRIAEMTDFLNE-QSCELE-  488

Query  470  EFDERLWCSLVDFIIVYSKVKIQIVFKNGTKIHVGM  505
            E+DE+L   L++ + V+   K+ + FK+G  I++ +
Sbjct  489  EYDEQLVRRLIEKVTVFDD-KLTVEFKSGVEIDIEI  523

92) btf_176 in NC_020387


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  300 bits (1123),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 183/394 (47%), Positives = 272/394 (70%), Gaps = 10/394 (2%)

Query  3    NKNVTVIPAKPTGFMQGLPGLITKRKVAGYARVSTDKDEQQNSYEAQVEYYTDYIKRNPE  62
            ++NVTVIPA      +  +    K +VA+Y RVSTD +EQ +SYE Q+E YT+YIK+N E
Sbjct  4    SRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKE  63

Query  63   WEFVEVYTDEGISGTSTKHREGFKRMIADALDGKIDLILTKSVSRFARNTVDSLTTIRQL  122
            WE+  +++D+GI+GT+TK RE F+RMI + + GKID+I+TKS+SRFARNT+D L  IRQL
Sbjct  64   WELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQL  123

Query  123  KDKGTEVYFEKENIFTMDSKGELLLTIMSSLAQEESRSISKNITWGKRKSMADGKVSFAY  182
            KDK   V+FEKENI TMDSKGE++LTIM+SLAQ+ES+S+S+N+  G +    +G V    
Sbjct  124  KDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNH  183

Query  183  SSFLGYDMGADGHLYIVEDQAKIVHRIYDEFLAGKTTYDIAVRLTEDGIPTPMNKVKWQA  242
              FLGY  + + +L I  + A +V RIY E+L G +  +I+  L  DGI T+  K KW++
Sbjct  184  KRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRP  243

Query  243  STVSNILQNVKYRGDSILQQYFVEDFLTKKIKKNTGELPLYYVSQNHPPIIPPEKFEMVQ  302
             T+ +ILQN KY GD++LQ+ +  DFL+KK  KN G +P YYV ++H PIIP E F  VQ
Sbjct  244  ETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQ  303

Query  303  EEFRRR-----KEGG---PYTCISPFSGRIVCGNCGGFYGRKVWHSGSSYQSFVWHCNNK  354
            EE  RR     + GG    Y+   ++S+ + CG+CG++Y R  W++  +Y+S+VW+C ++
Sbjct  304  EEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNN-RGYKSIVWRCVSR  362

Query  355  FTKRKY-CSTPSVKEDAIMKCFVDAFNNLIARKD  387
            +  +   C++P+++E+++    V A+N+L+A K+
Sbjct  363  LEEKGSECTAPTINEETLQTAVVKAINELLANKE  396

93) FPR_01300 in NC_021020


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  297 bits (1114),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 207/517 (41%), Positives = 332/517 (65%), Gaps = 20/517 (3%)

Query  2    KDVEVIKARNTLSPRARTNFEKRLRVAAYCRVSTDTEDQLNSYKSQVEYYTELIKSKPEW  61
            ++V VI A + ++    ++   ++RVAAYCRVSTD+E+Q +SY  Q+E YT+ IK + EW
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  62   SLAGIYADEAITGTQVKKREDFQRLINDCMNGDVDMVITKSISRFARNTLDTLKYVRMLK  121
             LAGI+AD++ITGT+ KKRE+F+R+I++CM G +DM+ITKSISRFARNTLD LKY+R LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  122  DKGVAVFFEEENINTLTMDGELLLVILSSVAQQEVENISANVKKGLKMKMQRGEL-VGFQ  180
            DK +AVFFE ENINT+   GE++L I++S+AQQE +++S NVK G++ + Q+GE+ V  +
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  181  GCLGYDYNPEDKTLTVNEEEAAVVRYIFQRYTEGAGGSVIAKELENLGYKTKRGSPKWAD  240
              LGY  + E+K L ++ E A VV+ I++ Y EGA+   I++ LE  G  T  G +KW  
Sbjct  185  RFLGYT-KDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRP  243

Query  241  STVIGIIKNEKYKGDILLGKTFTVDPISKRRLYNFGEEDQFYIREHHEPIISEEVFEAAQ  300
             T+  I++NEKY GD LL KT+TVD +SK+R+ N G   Q+Y+ + HEPII+ E+F   Q
Sbjct  244  ETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQ  303

Query  301  EILRRRAKPRSLNVDGKREKFSRKYAFSCMIECGFCGGTLTRRSWHSSSQYNKAIWQCVV  360
            E + RRA+ R+ + +GK+  +S KYA+S ++ CG CG+   R  W++ + Y+  +W+CV 
Sbjct  304  EEMVRRANLRGRK-GGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVS  361

Query  361  STKKGKKFCPESKGVDERTIERAFIESYRLLCQNNKDVLDEFMKRTEEALSESNAGKRLA  420
                    C  +  ++E T++ A + +   L  N+   L  + K     ++E N      
Sbjct  362  RLEEKGSECTAP-TINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEN------  414

Query  421  KAEKDIHALEVKKNKLVDMRLEDTIDKETYDRKYLDLSSQIEQLQK-ECESLQDAAETES  479
              ++  + +E K + L +  L ++  K+ Y+    D++ +I +L+    ++L + AE E+
Sbjct  415  --DNATDDIEGKLEELQQQLLIQAKSKNDYE----DVADEIYRLRELKQNALAENAEREG  468

Query  480  TMRKRVATFRQTLEQNE-VLDTFDRHIFESIVEKVIV  515
              R+R+A   + L+++   L+ +D ++   ++EKV V
Sbjct  469  K-RQRIAEMTDFLNEQSCELEEYDEQLVRRLIEKVTV  504

94) Arch_1578 in NC_014218


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  289 bits (1081),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 173/392 (45%), Positives = 257/392 (66%), Gaps = 9/392 (2%)

Query  1    MARTVTAIPATRALHTGAPLGQTTLRRVAGYARVSTDHEDQVTSYQAQVDYYTRYIDEHP  60
            ++R VT IPA + +            RVA+Y RVSTD E+Q +SY+ Q++ YT YI  + 
Sbjct  3    VSRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNK  62

Query  61   GWRLAGIYTDEGITGTSMKLRAGFQSMIADALDGKIDLIITKSVSRFARNTVDSLTTVRK  120
             W LAGI++D+GITGT+ K R  F+ MI + + GKID+IITKS+SRFARNT+D L  +R+
Sbjct  63   EWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQ  122

Query  121  LKDAGVEVYFEKENIWTFDAKGELLITIMSSLAQEEARSISENVTWGHRKRFADGKVSVP  180
            LKD  + V+FEKENI T D+KGE+++TIM+SLAQ+E++S+S+NV  G + R+ +G V V 
Sbjct  123  LKDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVN  182

Query  181  FGNLLGYDKGEDGNLVINPKQAVTVRLIYELFLEGNSMAGIKRHLEHHGHKTAKERTTWT  240
               +LGY K+E+ +LVI+P  A  V+ IY  +LEG S+  I R LE +G  TA  ++ W 
Sbjct  183  HKRFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  241  ITGIRNILTNEKYKGDALLQKSYTADFLTKKQVKNEGEVPQYYVTANHEPIVPTEVWDFV  300
               +++IL NEKY GDALLQK+YT DFL+KK+VKN+G VPQYYV  +HEPI+P E+   V
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  301  QAELADVregrrsssrtr-------efsgKIKCGQCGSWYGSKTWHSGSKYEKRVWRCNH  353
            Q E+    + R   +  +        +S+ + CG+CG  Y    W++ + Y   VWRC  
Sbjct  303  QEEMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVS  361

Query  354  KYSGNEK-CATPHLTDQQIKDTFTQALQQLAA  384
            +   +   C++P + ++ ++ +  +A+++L A
Sbjct  362  RLEEKGSECTAPTINEETLQTAVVKAINELLA  393

95) SCI_1127 in NC_022238


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  280 bits (1049),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 173/429 (41%), Positives = 286/429 (67%), Gaps = 18/429 (4%)

Query  2    KKVITIEPAKQVTHMVDLPSFTKRRVAGYARVSTDHEDQTTSYEAQMTYYTDYINSRSDW  61
            ++V  I + K+V +     S  K RVA+Y RVSTD E+Q++SYE Q+  YT+YI+   +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  62   EFVKMYSDEGISGTNTKKRLGFQEMVEDALDGKIDLILTKSVSRFARNTVDSLSTVRKLK  121
            E+  +++D+GI+GTNTKKR  F+ M+E+ + GKID+I+TKS+SRFARNT+D L  +R+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  122  EAGVEIYFEKENIWTFDSKGELLITIMSSLAQEESRSISENVTWGRRHQLAEGQVTFSYS  181
            +  + ++FEKENI T DSKGE+++TIM+SLAQ+ES+S+S+NV  G + +  +G+V  +  
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  182  QVLGFKKCDTGGFEIDQEEAKIVRYIFHQVLLGNNPNKIARELTAQGIPTPQGKRKWSYG  241
            + LG+ K +   + ID E A +V+ I+++ L G +  +I+R L A+GI T+ GK KW   
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  242  TVKRMLRNEKYKGDALLQKSFTTDFLTKSTKPNEGELPQYYVENNHEAIIKREVFDLVQV  301
            T+K++L+NEKY GDALLQK++T DFL+K    N+G +PQYYVEN+HE+II RE+F  VQ 
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  302  EL---DKL-EKKRQTSNIFTGR------LFCGDCGSAFGSKVWHSTSKYKRTIYQCNAKY  351
            E+    +L  +K     +++++      ++CG+CG  +    W++ + YK  + +C ++ 
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVSRL  363

Query  352  KG-EHKCQTPHVTEEEIKGWFLSAMNQLLGNREEIIAN------TELLIDMAKDTTPLES  404
                  C +P + EE ++   + A+N+LL+N+E +++       T +  +  + T  +E+
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  405  EIADLERHL  413
             + +L+++L
Sbjct  424  KLEELQQQL  432

96) SCRE_1068 in NC_022236


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  280 bits (1049),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 173/429 (41%), Positives = 286/429 (67%), Gaps = 18/429 (4%)

Query  2    KKVITIEPAKQVTHMVDLPSFTKRRVAGYARVSTDHEDQTTSYEAQMTYYTDYINSRSDW  61
            ++V  I + K+V +     S  K RVA+Y RVSTD E+Q++SYE Q+  YT+YI+   +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  62   EFVKMYSDEGISGTNTKKRLGFQEMVEDALDGKIDLILTKSVSRFARNTVDSLSTVRKLK  121
            E+  +++D+GI+GTNTKKR  F+ M+E+ + GKID+I+TKS+SRFARNT+D L  +R+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  122  EAGVEIYFEKENIWTFDSKGELLITIMSSLAQEESRSISENVTWGRRHQLAEGQVTFSYS  181
            +  + ++FEKENI T DSKGE+++TIM+SLAQ+ES+S+S+NV  G + +  +G+V  +  
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  182  QVLGFKKCDTGGFEIDQEEAKIVRYIFHQVLLGNNPNKIARELTAQGIPTPQGKRKWSYG  241
            + LG+ K +   + ID E A +V+ I+++ L G +  +I+R L A+GI T+ GK KW   
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  242  TVKRMLRNEKYKGDALLQKSFTTDFLTKSTKPNEGELPQYYVENNHEAIIKREVFDLVQV  301
            T+K++L+NEKY GDALLQK++T DFL+K    N+G +PQYYVEN+HE+II RE+F  VQ 
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  302  EL---DKL-EKKRQTSNIFTGR------LFCGDCGSAFGSKVWHSTSKYKRTIYQCNAKY  351
            E+    +L  +K     +++++      ++CG+CG  +    W++ + YK  + +C ++ 
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVSRL  363

Query  352  KG-EHKCQTPHVTEEEIKGWFLSAMNQLLGNREEIIAN------TELLIDMAKDTTPLES  404
                  C +P + EE ++   + A+N+LL+N+E +++       T +  +  + T  +E+
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  405  EIADLERHL  413
             + +L+++L
Sbjct  424  KLEELQQQL  432

97) SCR2_1068 in NC_022245


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  280 bits (1049),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 173/429 (41%), Positives = 286/429 (67%), Gaps = 18/429 (4%)

Query  2    KKVITIEPAKQVTHMVDLPSFTKRRVAGYARVSTDHEDQTTSYEAQMTYYTDYINSRSDW  61
            ++V  I + K+V +     S  K RVA+Y RVSTD E+Q++SYE Q+  YT+YI+   +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  62   EFVKMYSDEGISGTNTKKRLGFQEMVEDALDGKIDLILTKSVSRFARNTVDSLSTVRKLK  121
            E+  +++D+GI+GTNTKKR  F+ M+E+ + GKID+I+TKS+SRFARNT+D L  +R+LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  122  EAGVEIYFEKENIWTFDSKGELLITIMSSLAQEESRSISENVTWGRRHQLAEGQVTFSYS  181
            +  + ++FEKENI T DSKGE+++TIM+SLAQ+ES+S+S+NV  G + +  +G+V  +  
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  182  QVLGFKKCDTGGFEIDQEEAKIVRYIFHQVLLGNNPNKIARELTAQGIPTPQGKRKWSYG  241
            + LG+ K +   + ID E A +V+ I+++ L G +  +I+R L A+GI T+ GK KW   
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  242  TVKRMLRNEKYKGDALLQKSFTTDFLTKSTKPNEGELPQYYVENNHEAIIKREVFDLVQV  301
            T+K++L+NEKY GDALLQK++T DFL+K    N+G +PQYYVEN+HE+II RE+F  VQ 
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  302  EL---DKL-EKKRQTSNIFTGR------LFCGDCGSAFGSKVWHSTSKYKRTIYQCNAKY  351
            E+    +L  +K     +++++      ++CG+CG  +    W++ + YK  + +C ++ 
Sbjct  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVSRL  363

Query  352  KG-EHKCQTPHVTEEEIKGWFLSAMNQLLGNREEIIAN------TELLIDMAKDTTPLES  404
                  C +P + EE ++   + A+N+LL+N+E +++       T +  +  + T  +E+
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEG  423

Query  405  EIADLERHL  413
             + +L+++L
Sbjct  424  KLEELQQQL  432

98) SSUD12_1150 in NC_017621


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 160/369 (44%), Positives = 258/369 (70%), Gaps = 14/369 (3%)

Query  6    TIQATPSIIRSSSDDFSLKKR--RVAGYARVSTDHEDQATSYESQMRYYSEYINGRDDWE  63
             +   P+I R +++  S  K   RVA+Y RVSTD E+QA+SYE Q+  Y++YI+   +WE
Sbjct  6    NVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWE  65

Query  64   FVKMYSDEGISGTNTKLRTGFKAMVEDALNGKIDLIITKSVSRFARNTVDSLTTVRQLKE  123
            +  +++D+GI+GTNTK R  F+ M+E+ + GKID+IITKS+SRFARNT+D L  +RQLK+
Sbjct  66   LAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKD  125

Query  124  VGVEIYFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGLRKQFAEGKVHFPYTN  183
              + ++FEKENI T+DSKGE+++TIM+SLAQ+ES+S+S+NV  G++ ++ +G V+     
Sbjct  126  KNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKR  185

Query  184  VLGFKAGEDGAIVVDQDEAKTVRYIFQQALIGKSPYHIAKDLTEQGILSPSGKSHWNATT  243
             LG+  +E+  +V+D + A  V+ I+++ L G S  +I+++L  +GIL+++GK+ W + T
Sbjct  186  FLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPET  245

Query  244  IKRMLRNEKYKGDALLQKTYTIDFLTKKKNINRGELPQYYVENNHEAIVDRETFDAVQQV  303
            +K++L+NEKY GDALLQKTYT+DFL+KK+  N G +PQYYVEN+HE+I+ RE F  VQ+ 
Sbjct  246  LKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEE  305

Query  304  L----DNKGRKSSTT-IFSSKLV------CGDCGHFFGSKVWHSTSKYRRVIYQCNDKYK  352
            +    + +GRK++   ++SSK        CG+CG+++    W++ + Y+ ++ +C  +  
Sbjct  306  MVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWRCVSRLE  364

Query  353  SSGKKSIES  361
              G     +
Sbjct  365  EKGSECTAP  373

99) SMA_1372 in NC_016749


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  275 bits (1027),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 178/429 (42%), Positives = 283/429 (66%), Gaps = 8/429 (1%)

Query  3    TNNVEIIKADSLVRRRGVNVERHLKRVAAYCRVSSDSEDQKNSYESQVKHYKDYISQRSD  62
            + NV +I A   V     +  +   RVAAYCRVS+DSE+Q +SYE Q+ HY +YI +  +
Sbjct  4    SRNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKE  63

Query  63   WELADIYADEGISGTQVGKRQDFQRLINDCVNGEIDYIVTKAIARFARNTLDTLKYVRML  122
            WELA+I+AD+GI+GT+  KR++F+R+I++C+ G ID I+TK+I+RFARNTLD LKY+R L
Sbjct  64   WELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQL  123

Query  123  KDMQIGVYFEEENIDTLTMDGELLLTILSSVAQQEVENTSAHVKKGLKMKMQRGEL-IGF  181
            KD +I+V+FE ENI+T+   GE++LTI++S+AQQE ++ S +VK G++ + Q+GE+ +  
Sbjct  124  KDKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNH  183

Query  182  QGCLGYDYDVETKQLSINKKEAKIVRYIFERYLEGIGGKVIARELDELGYKSPRGLDHWN  241
            +  LGY  D E KQL I+   A +V+ I+  YLEG +   I+R L+  G  ++ G   W 
Sbjct  184  KRFLGYTKD-ENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWR  242

Query  242  DTTVLGIIKNEKYKGDILMGKTFTVDPISKRRLSNFGEEDKYYIKDNHEPIISKEDFEKA  301
              T+  I++NEKY GD L+ KT+TVD +SK+R+ N G   +YY+ ++HEPII++E F + 
Sbjct  243  PETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQV  302

Query  302  QEIRLRRAGNKKTVANVNGKRERYSKMYAFSSMLECGFCGSLLSRRSWHCRSDYRKVVWH  361
            QE  +RRA  +   +   GK+  YS  YA+SS++ CG CG +  R  W+ R+ Y+ +VW+
Sbjct  303  QEEMVRRANLR---GRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRG-YKSIVWR  358

Query  362  CVTSIkkgkkyckhskGLEELAIEGAFMEAYRQLYHSNENIVSDLLETIESELNDNSLNK  421
            CV+ +   K     +  ++E +++ A + A  +L  ++E ++S L   I + +N+++ ++
Sbjct  359  CVSRL-EEKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEN-DN  416

Query  422  ELKKITNKL  430
                I  KL
Sbjct  417  ATDDIEGKL  425

100) Clocl_3542 in NC_016627


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  265 bits (991),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 185/451 (42%), Positives = 293/451 (65%), Gaps = 13/451 (2%)

Query  2    HEVEVIKANRRISDRTAGKVADILRVAPYARVSTDSEEQLNSYKSQVMYYTDLVKKRKDW  61
            ++V VI A +R+++  ++     +RVA+Y RVSTDSEEQ +SY  Q+  YT+ +KK K+W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  62   VLVDIYADEAITGTQVTKRENFQRMINDCMDGKIDMIITKSISRFARNTLDTLKYVRMLK  121
             L +I+AD++ITGT+  KRE+F+RMI++CM GKIDMIITKSISRFARNTLD LKY+R LK
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  122  ERNIAVFFEDENINTLTMDGELLLVILSSVAQQEVENISANVKKGLKMKMKRGEL-VGFQ  180
            ++NIAVFFE ENINT+   GE++L I++S+AQQE +++S NVK G++ + ++GE+ V  +
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  181  SCLGYDYNPNDKSISINEAEADIVRYIFNRYIDGAGAYVIAKELTSLGYKTKNGNTEWHD  240
              LGY  + ++K + I+   A++V+ I+  Y++GA+   I++ L + G  T  G++ W+ 
Sbjct  185  RFLGYT-KDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRP  243

Query  241  TAVLGIIKNEKYKGDVLQVKTFTVDPISKRRLDNYGEEDQFYIKNHHEPIISEEIFEKAQ  300
             ++  I++NEKY GD L  KT+TVD +SK+R+ N G   Q+Y+ N HEPII+ E+F + Q
Sbjct  244  ETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQ  303

Query  301  AILDrrgakrrgvekgkrekYSRQYAFSSKLECAFCGSNLSRRNWHSGSDHEKVSWQCVT  360
              +  R A+ RG   GK+  YS +YA+SS + C+ CG    R +W++  +   + W+CV+
Sbjct  304  EEM-VRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNN-RGYKSIVWRCVS  361

Query  361  ATKKGKKYCPPSKAIEEKILEGAFVESYKLLCHNNSDVLDELIERMESVLSKNDFQKQLV  420
                    C ++ +I+E  L+ A V + + L  N+   L  L   + +V++ ++      
Sbjct  362  RLEEKGSECTAP-TINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEEN------  414

Query  421  RVENEIHAIEQKRNRLIDMRLEETIDKATYE  451
              +N  + IE K + L +  L ++  K  YE
Sbjct  415  --DNATDDIEGKLEELQQQLLIQAKSKNDYE  443

101) Clo1100_3478 in NC_016791


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  265 bits (989),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 174/430 (41%), Positives = 273/430 (64%), Gaps = 18/430 (4%)

Query  5    ITKIDPVKQQITQQLQPKKRVCAYCRVSTDSREQQNSFSAQLKYYKTLIEDQEDWQFAGI  64
            I  I  V ++ T + +PK RV AYCRVSTDS EQ +S+  Q+  Y   I  + +W++AGI
Sbjct  10   IPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGI  69

Query  65   YADEARSGTKLQKRDDFLRMMKDCEDGKIDMVITKSVTRFARNTVDSIQAIRRLKELGIA  124
            +AD++ +GT+ +KR++F RM+ +C  GKIDM+ITKS++RFARNT+D ++ IR+LK+  IA
Sbjct  70   FADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIA  129

Query  125  VFFEKEHINSLSEKREQMLTILSSLAQGESESISTNNKWAAVKRFQDGTFILGTPAY-GY  183
            VFFEKE+IN++  K E MLTI++SLAQ ES+S+S N K +   R+Q+G   +    + GY
Sbjct  130  VFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGY  189

Query  184  TKDENGELILQEEEAAVVRHIFREYLNGKGTYVIAKDLSEAGIPTIRSAEKWQDGVVKEI  243
            TKDEN +L+++ E A VV++I+REYL+G +   I+++L   GI T  +  KW+   +K I
Sbjct  190  TKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKI  249

Query  244  LQNPVYTGDLLHQKTLTTEVIPFKRKPNKGQLPQYLIEDNHEPLITREQAEAVMEIFEYR  303
            LQN  Y GD L QKT T + ++ KR  N+G +PQY +E++HEP+I RE    V E    R
Sbjct  250  LQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRR  309

Query  304  RKQMGMDDLEK--YQSRYAFSSKILCGECGSTFRRQKIYIGKPYEKIQWSCHRHIED-ST  360
             +  G  +  K  Y S+YA+SS + CG+CG  +RR      + Y  I W C  ++E+ ++
Sbjct  310  ANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVH-WNNRGYKSIVWRCVSRLEEKGS  368

Query  361  RCSQKAVREDDIKWAFTVMWNKLISNYTEMLI---PLLDTLKK---LRIDEQQEQEIGEC  414
             C+  ++ E+ ++         ++    E+L    P+L TLKK     ++E++++  ++ 
Sbjct  369  ECTAPTINEETLQ-------TAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDI  421

Query  415  SNRIMELTEQ  424
              ++ EL +Q
Sbjct  422  EGKLEELQQQ  431

102) Amet_4007 in NC_009633


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  254 bits (949),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 170/415 (41%), Positives = 273/415 (66%), Gaps = 13/415 (3%)

Query  12   KSQPSKSKLRVAAYARVSTDSDDQLVSLKAQRVHYENYIKSNPEWEFAGLYYDEGISGTK  71
            K+  SK+K+RVAAY RVSTDS++Q  S   Q  HY NYIK N EWE+AG++ D+GI+GT+
Sbjct  20   KTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTN  79

Query  72   KEKRLELLRMIRDCESNRIDFIITKSISRFARNTTDCLELVRHLMDIGVYIYFEKENLNT  131
              KR E+ RMI +C + +ID IITKSISRFARNT DCL  +R+L D  + ++FEKEN+NT
Sbjct  80   TKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINT  139

Query  132  GDMESELMLSILSGFAAEESASISQNTTWSISKKFQNGSYIIGTPPY-GYANVNG-EMVI  189
             D  +E+ML+I++++A +ES S+SQN   +I  ++Q+G   +    + GY++ +  ++VI
Sbjct  140  MDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVI  199

Query  190  VPEEAEIIKRIFAECLSGKGGSVIAKGLNRDKIPARRGN-HWSSGTVIDMLRNEKYKGDV  248
             PE AE++KRI+ E L G +   I++GL+ D I +  G+  W + T+  +L+NEKY GD 
Sbjct  200  DPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDA  259

Query  249  LFQKTYTDSNF---NRHINNGEKNQFYCKDHHEPIISREVFSKAQKLITQRAKSMS-KTA  304
            L+QKTYT  +F   +R  NNG   Q+Y  + HEPII+RE+F + Q  + +RA+  + K +
Sbjct  260  LLQKTYT-VDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGG  318

Query  305  NKKAYQNRYVLSGRILCGECGSKFKRRTNYSVGRSY--IAWSCKGHIEDKDS-CSMLFLR  361
            +K+ Y ++Y LS+ + CG+CG  + RR + +  R+Y  I W C +++E+K+S C+   + 
Sbjct  319  KKRVYSSKYALSSIVYCGHCGDIY-RRVHWN-NRGYKSIVWRCVSRLEEKGSECTAPTIN  376

Query  362  DGEIKATFSTMMNKLAFSKKLILEPLYDSINKIDEECDLARIDAIDKRMEQLTEE  416
            +  ++++    +N L  +K  +L  L  +I  + +E +    D I+ ++E+L ++
Sbjct  377  EETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGKLEELQQQ  431

103) Clo1100_3562 in NC_016791


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  254 bits (950),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 269/411 (66%), Gaps = 13/411 (3%)

Query  16   SKNKLRVAAYARVSTDSDEQLVSLKAQREHYENYIKSNPEWEFAGLYYDEGISGTKKEKR  75
            SK K+RVAAY RVSTDS+EQ  S   Q EHY NYIK N EWE+AG++ D+GI+GT+  KR
Sbjct  24   SKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKR  83

Query  76   PELLRMIRDCENDRINFIITKSISRFARNTTDCLELVRHLMDIGVYIYFEKENLNTGDME  135
             E+ RMI +C  ++I+ IITKSISRFARNT DCL  +R+L D  + ++FEKEN+NT D  
Sbjct  84   EEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSK  143

Query  136  SELMLSILSGFAAEESASISQNTTWSITKKFQNGSYIIGSPPY-GYANVNG-EMVIIPEE  193
            +E+ML+I++++A +ES S+SQN   +I  ++Q+G   +    + GY++ +  ++VI PE 
Sbjct  144  GEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEG  203

Query  194  AEVIKRIFTECLSGKGGSVIAKGLNRDKIPARRGN-HWSSGTIIEMLRNEKYKGDVLFQK  252
            AEV+KRI+ E L G +   I++GL+ D I +  G+  W + T+  +L+NEKY GD L+QK
Sbjct  204  AEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQK  263

Query  253  TYTDSNF---NRHINNGEKDQFYCKNHHEPIISREVFSKAQKLIAERAKSRNNSFAKN-A  308
            TYT  +F   +R  NNG   Q+Y  N HEPII+RE+F + Q  +  RA+ R    +K+  
Sbjct  264  TYT-VDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRV  322

Query  309  YQNRYVLSGRIICGECGSKFRRKTNYSVGRSY--IAWSCIGHIEDKDS-CSMLFLRDGEI  365
            Y ++Y LS+ + CG+CG  +RR       R+Y  I W C++++E+K+S C+   + +  +
Sbjct  323  YSSKYALSSIVYCGHCGDIYRR--VHWNNRGYKSIVWRCVSRLEEKGSECTAPTINEETL  380

Query  366  KATFTTMMNKLAFSRKIILEPLYNSINKIDEECDLERIDAIDKRMEQLTEE  416
            +++    +N L  ++  +L  L ++I  + +E + +  D I+ ++E+L ++
Sbjct  381  QTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGKLEELQQQ  431

104) Pmob_0428 in NC_010003


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  244 bits (910),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 167/400 (42%), Positives = 263/400 (66%), Gaps = 16/400 (4%)

Query  4    VTRIDGNNALQAFKPKVRVAAYCRVSTDSDEQMASLEAQKDHYESYIRANPDWEFAGIYY  63
            + R++ N++ ++ KPK+RVAAYCRVSTDS+EQ +S E Q +HY +YI+ N +WE+AGI+ 
Sbjct  13   IKRVGNNKTSES-KPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFA  71

Query  64   DEGISGTKKENRTGLLRLLADCENKKIDFIITKSVSRFARNTTDCIEMVRKLTDLGVFIY  123
            D+GI+GT+  +R  + R++ +C   KID IITKS+SRFARNT DC+  +R+L D  + ++
Sbjct  72   DDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVF  131

Query  124  FEKENINTQRMEGELVLTILGSLAENESLSIAENSKWSIRRRFQNGSYKISYPPY-GYDY  182
            FEKENINT    GE++LTI++SLA++ES S+++N K +I+ R+Q+G  +++   + GY  
Sbjct  132  FEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTK  191

Query  183  VDGK-LFINKEQAEIIKRIFSEALAGKGTQKIADGLNLDKIPTKRG-SHWTATTIRGILS  240
             + K L I+ E AE++KRI+ E L G +  +I+ GL+ D I T  G + W + T++ IL 
Sbjct  192  DENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQ  251

Query  241  NEKYTGDVLLQKTYTDENF--KRHYNRGEKDQYMIKDHHEAIISHEEFEAAQEILKQRGK  298
            NEKY GD LLQKTYT + +  KR  N G   QY + + HE+II++E F   QE + +R++
Sbjct  252  NEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRAN  311

Query  299  EKGVIKGSSK-YQNRYLFSGKIKCAECGSNFKRRIHGSGNRKY--IAWCCTKHIKD-ASS  354
             +G   G  + Y ++Y +S+ + C++CG  + RR+H   NR Y  I W C  ++ + +S 
Sbjct  312  LRGRKGGKKRVYSSKYALSSIVYCGHCGDIY-RRVH-WNNRGYKSIVWRCVSRLEEKGSE  369

Query  355  CSMKFVREDAIHQAFAVMINKLIFGHKFIIRPLLQSLKKA  394
            C+   + E++++ A    IN L+        P+L +LKK 
Sbjct  370  CTAPTINEETLQTAVVKAINELLANKE----PFLSTLKKN  405

105) MELS_2015 in NC_015873


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  240 bits (896),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 155/378 (42%), Positives = 247/378 (66%), Gaps = 15/378 (3%)

Query  25   YCRVSTDSDAQLESLEAQKTHYENYITSRDDWEFAGLYYDEGITGTKKDKRPELLRLIDD  84
            YCRVSTDS+ Q  S E Q  HY NYI    +WE+AG++ D+GITGT+  KR E+ R+I++
Sbjct  33   YCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEFNRMIEE  92

Query  85   CKAGKVDFIITKSISRFSRNTTDCLELVRKLLALRIPIFFEKENINTGSMESELFLAILS  144
            C AGK+D IITKSISRF+RNT DCL  +R+L    I++FFEKENINT    +E+ L+I++
Sbjct  93   CMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEIMLTIMA  152

Query  145  SMAEGESVSISENSKWSIQKRFENGTFKCSYPPY-GYDWNGE-QMVVNPEQAAVVKEIFT  202
            S+A+ ES S+S+N K +IQ R+++G  + +   + GY  + + Q+V++PE A VVK I+ 
Sbjct  153  SLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEVVKRIYR  212

Query  203  ALLSGKGTHAIADDLNQRGVPSKRG-GRWTATTIRGMLSNEKYVGDCLFQKTYSDSQFV-  260
              L G +   I+ +L+  G+ +  G ++W + T++ +L NEKY+GD L+QKTY+  +F+ 
Sbjct  213  EYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYT-VDFLS  271

Query  261  --RHSNHGEQAQYMVRDHHEPIISREDFEAAQAFVKQRASEKGVVKGTEK-YQNRYVFSG  317
              R  N+G  +QY V + HEPII+RE F   Q  + +RA+ +G   G  + Y ++Y +S+
Sbjct  272  KKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVYSSKYALSS  331

Query  318  KIICGECDDTFKRRIH-SCTGYKYAAWCCNTHIVDKNR-CHMLFVKDEALKLAFITMMNK  375
             + CG+C+D + RR+H +  GYK   W C +++ +K   C    +++E+L+ A +  +N 
Sbjct  332  IVYCGHCGDIY-RRVHWNNRGYKSIVWRCVSRLEEKGSECTAPTINEETLQTAVVKAINE  390

Query  376  LIFSHRLILKPYLEAIKN  393
            L+ +      P+L ++K+
Sbjct  391  LLANK----EPFLSTLKK  404

106) Bsel_2980 in NC_014219


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  235 bits (877),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 155/369 (43%), Positives = 247/369 (67%), Gaps = 14/369 (3%)

Query  9    RIIPAKSKE-QTRLRVCAYVRVSTQMAAQGESFDQQITHYTNRFEADPAVDFMGVFSDYG  67
            R+   K+ E + ++RV AY RVST+   Q+ S++ QI HYTN +  +   ++ G+F+D G
Sbjct  15   RVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDG  74

Query  68   LTGTTVK-RPGFQAMMDQARAGKIDVIYTKAISRFARNTQAMLESIRELRTLNVAVRFEK  126
            +TGT  K R  F+ M+++  AGKID+I TK+ISRFARNT   L  IR+L+  N+AV FEK
Sbjct  75   ITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEK  134

Query  127  EQIDTRTGDGELMLTVLSSFAQEESENISQNVRWSIQRKFQKGLVVLNTERFFGYEKVEG  186
            E+I+T  + GE+MLT+++S+AQ+ES+++SQNV+ +IQ ++Q+G V +N  RF+GY K E 
Sbjct  135  ENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDEN  194

Query  187  I-LKPIPEEAEVIKSIYDAYLEGQGTHRIAKNLNEAGVPTISGKP-WRESSILYLLENEK  244
              L   PE AEV+K IY  YLEG +  +I++ L+  G+ T +GK+ WR  ++  +L+NEK
Sbjct  195  KQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEK  254

Query  245  YKGDLLQQKTYTPG-VRKGKRKNQGEVEAYLMEDHHEPIVSKDMWQAVQEERLRRK----  299
            Y GD L QKTYT + + K + KN+G V  Y +E+ HEPI+++++   VQEE +RR     
Sbjct  255  YIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRG  314

Query  300  ----RNHQMNKRYPASGKLHCSKCGGTLRRRIWNKGKPYETIVWQCSTYIQQGKSACEGT  355
                +++  + +Y+ S+ + C+ CG+  RR  WN+ + Y +IVW+C + +++  S C + 
Sbjct  315  RKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNN-RGYKSIVWRCVSRLEEKGSECTAP  373

Query  356  TVKDEALPN  364
            T+++E+L  
Sbjct  374  TINEETLQT  382

107) SpiGrapes_2795 in NC_016633


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  234 bits (873),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 166/395 (43%), Positives = 251/395 (64%), Gaps = 28/395 (7%)

Query  1    MRTIKLIQKPKQLATKNRKKRVAAYARVSTVHERQEHSLESQVDHYKRLIQANPEWEYQG  60
            + +IK + + K   +K  K RVAAY RVST  E Q  S E Q++HY   I+ N EWE  G
Sbjct  10   IPAIKRVGNNKTSESK-PKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAG  68

Query  61   IYIDDGVSGTQISGRTQFQELITKCEQGMIDIVLTKSISRFARNTVDLLETVRRLKELNI  120
            I+ DDG++GT+   R +F+ +I  C  G ID+++TKSISRFARNT+D L  +R+LK+ NI
Sbjct  69   IFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNI  128

Query  121  DVRFEKENIETISSTGEFLLTVLASFAQEESRSTSENLRWGVRKRYEKG-ISLHHRVY-G  178
             V FEKENI+T+ S GE++LT++AS+AQ+ES+S S+N++ G++ RY++G + ++H+ + G
Sbjct  129  AVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLG  188

Query  179  Y-RWTGKELVIEPMTAKVVRKIFRDYLKGKSMKRIADELNNRSILHFGKPFN--DVAIHT  235
            Y +   K+LVI+P  A VV++I+R+YL G S+ +I+  L+  +IL  +   +    ++  
Sbjct  189  YTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKK  248

Query  236  ILHNERYIGDTLLQKTYCVDFMSQPRKKNRGEHPMYYVEDTHPPIIKREIFEAVSREIDR  295
            IL+NE+YIGD+LLQKTY VDF+S+ R KN G  P YYVE++H PII RE+F  V  E+ R
Sbjct  249  ILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVR  308

Query  296  RRELGVYNMPKVSRRCFTGK------IICEKCGNNY------IRTYKTPTNANWRCKSNR  343
            R +L   +  K  +R +++K      + C  CG+ Y       R YK+     WRC S  
Sbjct  309  RANLRGRKGGK--KRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIV---WRCVSRL  363

Query  344  RDGIKGCRSIGINEEQL-----KILSNFMLGIDEF  373
             +    C +  INEE L     K +++++   + F
Sbjct  364  EEKGSECTAPTINEETLQTAVVKAINELLANKEPF  398

108) HM1_2865 in NC_010337


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  228 bits (851),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 164/403 (41%), Positives = 263/403 (66%), Gaps = 9/403 (2%)

Query  20   KLRVAAYCRVSTDNDDQLLSLEAQKQHYEKIIRDNPEWEFAGLYCDEGISGTKKENREGL  79
            K+RVAAYCRVSTD+++Q  S E Q +HY + I+ N EWE+AG++ D+GI+GT+  +RE +
Sbjct  27   KIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEF  86

Query  80   LRLLRDCEKHKIDFIITKSISRFARNTADCLEIVRRLSELGIFIYFEKENINTHSMDsel  139
             R++ +C   KID IITKSISRFARNT DCL  +R+L +  I ++FEKENINT    +E+
Sbjct  87   NRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEI  146

Query  140  llsvlsslaenesvsISQNNKWGVKRRFQNGTFKLSSPPY-GYIYCNGT-IVPHPEEAAV  197
            +L++++SLA++ES S+SQN K G++ R+Q+G  +++   + GY   +   +V +PE A V
Sbjct  147  MLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFLGYTKDENKQLVIDPEGAEV  206

Query  198  VKRIFAEILTGRGTHAVAEGLNADGINPARGK-KWTASAVRGILENEKYVGDSLFQKTYT  256
            VKRI+ E L G +   ++ GL+ADGI  A GK KW + +++ IL+NEKY+GD+L+QKTYT
Sbjct  207  VKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTYT  266

Query  257  DDNFI---RHYNHGEEEMYYIKDHHEAIISREDFEAAKRILAQRSREKGIEKGTGK-YLN  312
             D F+   R  N+G    YY+ + HE+II+RE F   +  + +R+  +G   G  + Y +
Sbjct  267  VD-FLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVYSS  325

Query  313  RYAFSGRIICGECGSVFKRRIHMANKPGQYVAWCCSKHIASKTKDCSMVYIRDDRIKEAF  372
            +YA+S+ + CG+CG ++ RR+H  N+  + + W C  ++  K  +C+   I ++ ++ A 
Sbjct  326  KYALSSIVYCGHCGDIY-RRVHWNNRGYKSIVWRCVSRLEEKGSECTAPTINEETLQTAV  384

Query  373  VLMMNKLYSNHNIILKPLVEAMKEQDASGSYAKIREIDAKIEE  415
            V  +N L +N + +L  L   +       +     +I++K+EE
Sbjct  385  VKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGKLEE  427

109) Desde_1454 in NC_018017


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  218 bits (813),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 272/414 (66%), Gaps = 19/414 (4%)

Query  2    KTVRIIPAIPK--------ENIKLRVAAYCRVSTYGPAQLRSLELQIKTYTRMIQSHPDW  53
            + V +IPAI +         + K+RVAAYCRVST +  Q  S E+QI  YT  I+ + +W
Sbjct  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64

Query  54   IFAGVFFDVGKsglrrsgrsglDKMLKKAAKGKIDYIITKSISRVSRDTLEVLKIIRFLR  113
             +AG+F D G +G     R  +++M+     GKID IITKSISR +R+TL+ LK IR L+
Sbjct  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124

Query  114  ERGINMHFENEGLDSIEIGKEFEITLRGMLAQDESRNTSENIQWGFQRKFEKGDIFTKYK  173
            ++ I + FE+E +++++   E+ +T+ + LAQ+ES++ S+N++ G+Q ++++G++  + K
Sbjct  125  DKNIAVFFEKENINTMDSKGEIMLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHK  184

Query  174  SFMGYTCIDD-EIVIVPEQAEVVRKMFDLYLQGLSFGQIKAYLESQGIKTVTGKEVWDKK  232
             F+GYT  ++ ++VI PE AEVV++++  YL+G S+ QI   LE++GI T +GK  W   
Sbjct  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244

Query  233  TIQKMLKNEKYKGDTMLQKTFTEDFMTGKKRKNIGQRYRYYVKDSHPAIVSAEVFNKVQE  292
            T++K+L+NEKY GD++LQKT+T DF++ K+ KN G   +YYV +SH +I++ E+F +VQE
Sbjct  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304

Query  293  EMARRGGLVHKEDGTVESSGSKYNGKYllgnllmcgncgASYRR--RTERG--KVVWRCA  348
            EM RR+ L  + +G        Y++KY L++++ CG+CG  YRR  + +RG   +VWRC 
Sbjct  305  EMVRRANLRGRKGGK----KRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCV  360

Query  349  TRVEKGTAACFNSPTLDEEWIKSCLGEAVCEHGIYEETFVRNTIENI-RVFEEH  401
            +R+E   + C  +PT++EE +++ +  A+ E     E F+     NI  VF+E+
Sbjct  361  SRLEEKGSEC-TAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEE  413


 Score = 34.0 bits (109),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 15/44 (35%), Positives = 27/44 (62%), Gaps = 0/44 (0%)

Query  373  LGEAVCEHGIYEETFVRNTIENIRVFEEHILICYKDKLCINIKL  416
            L E  CE   Y+E +VR  IE++ VF++ + + +K  + I+I +
Sbjct  480  LNEQSCELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDIEI  523

110) Clocel_0801 in NC_014393


> NC_013853_P1|25|G25|289168546|YP_003446815.1|Streptococcus_mitis_B6|-|20700..22271|-|smi_1713|site-specific 
recombinase
Length=523

 Score =  205 bits (764),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 151/371 (41%), Positives = 234/371 (64%), Gaps = 19/371 (5%)

Query  18   KKRVAAYARVSSGKDAMLHSLSAQVSYYSDLIQKQVGWEYAGVFADEALTGTKEI-RPEF  76
            K RVAAY RVS++ +    S   Q+  Y++ I+K+  WE AG+FAD+++TGT+   R EF
Sbjct  27   KIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEWELAGIFADDGITGTNTKKREEF  86

Query  77   QRLLNECRSGNIDMVITKSISRLARNTVTMLETVRELKSLNIDVYFEKENIHSLSGDGEL  136
            +R+++EC +G+IDM+ITKSISR+ARNT+  L  +R+LK  NI V+FEKENI+++ + GE+
Sbjct  87   NRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLKDKNIAVFFEKENINTMDSKGEI  146

Query  137  MLTILASFAQEESRSVSENCKWRIRKGFEAGE--LINLRFMYGY-Hiekekieineseae  193
            MLTI+AS+AQ+ES+S+S+N K  I+  ++ GE  + + RF+ GY   E+ ++ I+   AE
Sbjct  147  MLTIMASLAQQESQSLSQNVKLGIQYRYQQGEVQVNHKRFL-GYTKDENKQLVIDPEGAE  205

Query  194  iVRMIFDDYIEGIGCTLIAKKLRDMNVPKIRG-GIWNSERVANIIKNEKYAGNALLQKKY  252
            +V+ I+ +Y+EG +   I++ L    +    G + W +E + +I++NEKY G+ALLQK Y
Sbjct  206  VVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPETLKKILQNEKYIGDALLQKTY  265

Query  253  VKNHLTKTLVINKGNLPMYYAEGTHPAIINVETFQRAQEIMSKNVEKYTRDNTR-----V  307
              + L+K  V N+G +P YY E +H +II  E F + QE M +  +   R   +      
Sbjct  266  TVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQEEMVRRANLRGRKGGKKRVYSS  325

Query  308  KYPFTSIIVCGICGKNYRHK--NTRG--RISWNCSTHLKYGKDSCHSKQIPEEIL----I  359
            KY+++SI+ CG CG  YR+   N RG   I W C ++L      C +  I EE L    +
Sbjct  326  KYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLEEKGSECTAPTINEETLQTAVV  385

Query  360  SVTTEVLGLKE  370
                E+L+ KE
Sbjct  386  KAINELLANKE  396