Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
hypothetical protein |
NC_011498 (Helicobacter pylori P12) |
2e-33 |
100 |
|
hypothetical protein |
NC_017919 (Helicobacter pylori XZ274) |
3e-33 |
99 |
|
hypothetical protein |
NC_017926 (Helicobacter pylori XZ274) |
3e-33 |
99 |
|
hypothetical protein |
NC_014555 (Helicobacter pylori PeCan4) |
1e-32 |
96 |
|
hypothetical protein |
NC_017741 (Helicobacter pylori Shi112) |
3e-32 |
95 |
|
hypothetical protein |
NC_017740 (Helicobacter pylori Shi169) |
3e-32 |
95 |
|
hypothetical protein |
NC_017739 (Helicobacter pylori Shi417) |
3e-32 |
95 |
|
hypothetical protein |
NC_017358 (Helicobacter pylori Cuz20) |
3e-32 |
94 |
|
hypothetical protein |
NC_011333 (Helicobacter pylori G27) |
1e-31 |
98 |
|
hypothetical protein |
NC_017376 (Helicobacter pylori Santal49) |
6e-32 |
100 |
|
hypothetical protein |
NC_014256 (Helicobacter pylori B8) |
1e-31 |
99 |
|
hypothetical protein |
NC_021218 (Helicobacter pylori UM066) |
2e-31 |
99 |
|
hypothetical protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
2e-31 |
95 |
|
hypothetical protein |
NC_017374 (Helicobacter pylori 2017) |
2e-31 |
95 |
|
hypothetical protein |
NC_017381 (Helicobacter pylori 2018) |
2e-31 |
95 |
|
hypothetical protein |
NC_017357 (Helicobacter pylori 908) |
2e-31 |
95 |
|
hypothetical protein |
NC_017367 (Helicobacter pylori F57) |
3e-31 |
98 |
|
hypothetical protein |
NC_017379 (Helicobacter pylori Puno135) |
3e-31 |
97 |
|
hypothetical protein |
NC_019560 (Helicobacter pylori Aklavik117) |
6e-31 |
96 |
|
hypothetical protein |
NC_022130 (Helicobacter pylori SouthAfrica20) |
5e-30 |
94 |
|
hypothetical protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
5e-30 |
93 |
|
hypothetical protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
7e-30 |
92 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011498_P1' AND ph.id_pai_orf='25' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc