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Homologs of XC_3025 gene of NC_007086_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) XC_3025
( YP_244093.1 )

HrpF protein

NC_007086
(Xanthomonas campestris 8004)

0.0

100

2) hrpF
( NP_636591.1 )

HrpF protein

NC_003902
(Xanthomonas campestris ATCC 33913)

0.0

100

3) hrpF
( YP_001904493.1 )

type III secretion system host membrane insertion protein

NC_010688
(Xanthomonas campestris B100)

0.0

4) XCR_1459
( YP_005636476.1 )

type III secretion translocon protein HrpF

NC_017271
(Xanthomonas campestris 756C)

0.0

5) hrpF
( YP_362142.1 )

HrpF protein

NC_007508
(Xanthomonas campestris 85-10)

0.0

6) XAC29_02025
( YP_007634898.1 )

HrpF protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

0.0

7) hrpF
( YP_007648817.1 )

HrpF protein

NC_020815
(Xanthomonas citri Aw12879)

0.0

8) hrpF
( NP_640749.1 )

HrpF protein

NC_003919
(Xanthomonas axonopodis 306)

0.0

9) hrpF
( YP_005630689.1 )

type III secretion translocon protein HrpF

NC_017267
(Xanthomonas oryzae BLS256)

0.0

10) hrpF
( YP_004849989.1 )

HrpF protein

NC_016010
(Xanthomonas axonopodis F1)

0.0

11) XOO_0109
( YP_449138.1 )

HrpF protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

0.0

12) hrpF
( YP_001911263.1 )

HrpF/NolX/HrpK

NC_010717
(Xanthomonas oryzae PXO99A)

0.0

13) hrpF
( YP_198705.1 )

HrpF protein

NC_006834
(Xanthomonas oryzae KACC10331)

0.0

• Sequence Alignments

1) XC_3025 in NC_007086


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score = 1328 bits (5039),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 921/921 (100%), Positives = 921/921 (100%), Gaps = 0/921 (0%)

Query  1    MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG  60
            MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG
Sbjct  1    MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG  60

Query  61   NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV  120
            NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV
Sbjct  61   NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV  120

Query  121  TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF  180
            TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF
Sbjct  121  TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF  180

Query  181  AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW  240
            AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW
Sbjct  181  AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW  240

Query  241  DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM  300
            DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM
Sbjct  241  DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM  300

Query  301  ASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD  360
            ASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD
Sbjct  301  ASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD  360

Query  361  GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP  420
            GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP
Sbjct  361  GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP  420

Query  421  ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT  480
            ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT
Sbjct  421  ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT  480

Query  481  EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ  540
            EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ
Sbjct  481  EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ  540

Query  541  WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV  600
            WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV
Sbjct  541  WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV  600

Query  601  KDDKADPAVRDAAKQllgdpllfgllNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY  660
            KDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY
Sbjct  601  KDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY  660

Query  661  EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW  720
            EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW
Sbjct  661  EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW  720

Query  721  DSKILDGISVALSAMNGIPLIGevadaaalafeseaqaaQVIDTALQGGNLSLAWKLAGI  780
            DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGI
Sbjct  721  DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGI  780

Query  781  NMagavvgavggPTARLaakgaakgvaegaakgatqgttkgaakgggkgVAEREKPLDIA  840
            NMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIA
Sbjct  781  NMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIA  840

Query  841  KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA  900
            KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA
Sbjct  841  KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA  900

Query  901  IADNFEADTKENLRHVRGRRK  921
            IADNFEADTKENLRHVRGRRK
Sbjct  901  IADNFEADTKENLRHVRGRRK  921

2) hrpF in NC_003902


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score = 1328 bits (5039),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 921/921 (100%), Positives = 921/921 (100%), Gaps = 0/921 (0%)

Query  1    MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG  60
            MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG
Sbjct  1    MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG  60

Query  61   NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV  120
            NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV
Sbjct  61   NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV  120

Query  121  TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF  180
            TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF
Sbjct  121  TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF  180

Query  181  AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW  240
            AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW
Sbjct  181  AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW  240

Query  241  DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM  300
            DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM
Sbjct  241  DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM  300

Query  301  ASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD  360
            ASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD
Sbjct  301  ASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD  360

Query  361  GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP  420
            GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP
Sbjct  361  GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP  420

Query  421  ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT  480
            ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT
Sbjct  421  ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT  480

Query  481  EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ  540
            EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ
Sbjct  481  EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ  540

Query  541  WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV  600
            WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV
Sbjct  541  WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV  600

Query  601  KDDKADPAVRDAAKQllgdpllfgllNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY  660
            KDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY
Sbjct  601  KDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY  660

Query  661  EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW  720
            EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW
Sbjct  661  EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW  720

Query  721  DSKILDGISVALSAMNGIPLIGevadaaalafeseaqaaQVIDTALQGGNLSLAWKLAGI  780
            DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGI
Sbjct  721  DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGI  780

Query  781  NMagavvgavggPTARLaakgaakgvaegaakgatqgttkgaakgggkgVAEREKPLDIA  840
            NMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIA
Sbjct  781  NMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIA  840

Query  841  KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA  900
            KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA
Sbjct  841  KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA  900

Query  901  IADNFEADTKENLRHVRGRRK  921
            IADNFEADTKENLRHVRGRRK
Sbjct  901  IADNFEADTKENLRHVRGRRK  921

3) hrpF in NC_010688


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score = 1327 bits (5034),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 919/921 (99%), Positives = 920/921 (99%), Gaps = 0/921 (0%)

Query  1    MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG  60
            MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG
Sbjct  1    MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYG  60

Query  61   NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNAKDIKGSRLPPAVDGSSV  120
            NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFN KDIKGSRLPPAVDGSSV
Sbjct  61   NTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSV  120

Query  121  TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF  180
            TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF
Sbjct  121  TWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFF  180

Query  181  AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW  240
            AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW
Sbjct  181  AIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW  240

Query  241  DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM  300
            DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM
Sbjct  241  DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAM  300

Query  301  ASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD  360
            ASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD
Sbjct  301  ASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVD  360

Query  361  GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP  420
            GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP
Sbjct  361  GSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDP  420

Query  421  ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT  480
            ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT
Sbjct  421  ALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT  480

Query  481  EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ  540
            EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ
Sbjct  481  EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQ  540

Query  541  WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV  600
            WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV
Sbjct  541  WKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIV  600

Query  601  KDDKADPAVRDAAKQllgdpllfgllNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY  660
            KDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY
Sbjct  601  KDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFY  660

Query  661  EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW  720
            EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW
Sbjct  661  EHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW  720

Query  721  DSKILDGISVALSAMNGIPLIGevadaaalafeseaqaaQVIDTALQGGNLSLAWKLAGI  780
            DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGI
Sbjct  721  DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGI  780

Query  781  NMagavvgavggPTARLaakgaakgvaegaakgatqgttkgaakgggkgVAEREKPLDIA  840
            NMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIA
Sbjct  781  NMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIA  840

Query  841  KGYIIGTTINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA  900
            KGYIIGT+INRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA
Sbjct  841  KGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKA  900

Query  901  IADNFEADTKENLRHVRGRRK  921
            IADNFEADTKENLRHVRGRRK
Sbjct  901  IADNFEADTKENLRHVRGRRK  921

4) XCR_1459 in NC_017271


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score = 1269 bits (4813),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 881/888 (99%), Positives = 883/888 (99%), Gaps = 0/888 (0%)

Query  1    MNDSDLLLAMDNLFLQQIYLLIAATYGNTSLNGPGSGIPGLDTPSADDLQASQPIEKRTS  60
            MNDSDLLLAMDNLFLQQIY LIAATYGNTSLNGPGSGIPGLDTPSADDLQASQPIEKRTS
Sbjct  34   MNDSDLLLAMDNLFLQQIYRLIAATYGNTSLNGPGSGIPGLDTPSADDLQASQPIEKRTS  93

Query  61   WPTLSAPFNAKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLD  120
            WPTLSAPFN KDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLD
Sbjct  94   WPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLD  153

Query  121  DKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALG  180
            DKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALG
Sbjct  154  DKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALG  213

Query  181  GKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEK  240
            GKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEK
Sbjct  214  GKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEK  273

Query  241  INDPATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHP  300
            INDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHP
Sbjct  274  INDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHP  333

Query  301  QVTAQGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKW  360
            QVTAQGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKW
Sbjct  334  QVTAQGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKW  393

Query  361  TDLDAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKH  420
            TDLDAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKH
Sbjct  394  TDLDAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKH  453

Query  421  AQIAQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQL  480
            AQIAQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQL
Sbjct  454  AQIAQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQL  513

Query  481  VEGDSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTVPELKT  540
            VEGDSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLT PELKT
Sbjct  514  VEGDSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKT  573

Query  541  LDTINSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGY  600
            LDTINSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGY
Sbjct  574  LDTINSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGY  633

Query  601  KKPHSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMG  660
            KKPHSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMG
Sbjct  634  KKPHSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMG  693

Query  661  KADQPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGefadaaalafe  720
            KADQPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGE ADAAALAFE
Sbjct  694  KADQPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFE  753

Query  721  seaqaaqVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakg  780
            SEAQAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKG
Sbjct  754  SEAQAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKG  813

Query  781  atqgttkgaakgggkgVAEREKPRDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDK  840
            ATQGTTKGAAKGGGKGVAEREKP DIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDK
Sbjct  814  ATQGTTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDK  873

Query  841  ERKKGEIRKNLEAAGGVPLGKQFIPRAIADNFEADTKENLRHVRGRRK  888
            E+KKGEIRKNLEAAGGVPLGKQFIP+AIADNFEADTKENLRHVRGRRK
Sbjct  874  EKKKGEIRKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK  921

5) hrpF in NC_007508


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  699 bits (2642),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/700 (67%), Positives = 594/700 (85%), Gaps = 21/700 (3%)

Query  106  DFDPKHIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDP  165
            +F+PK+IKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  166  STPADLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKISAQDLWDFSDSHPQVKE  217
            +TP+DLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV  
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  218  LGGKNDEFNPKNIKGSNPPPAAEGSTVTWNEGQLNQSELEIVSVLDRHKDQVDSLSFDQL  277
             GGKN  +NP ++KG + PP+ +GS+VTW+ G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396

Query  278  DAKINDPSTQPDLKKALQGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  334
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456

Query  335  AEYNDKQAKSYTQNYIASDSPDKTKASVMTKSDALRELYRYSDYLPGNLSEDEFAKIVDG  394
            A+Y ++QAK+YTQNY+ASDSPDKT ++VMT SDA+RELYRYSDYLP +L++D F ++V+G
Sbjct  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516

Query  395  DSKTGKCPPQVIAAAQYFRDHPDEWKEFAGDSGSMSTPDFLQKSTSEMHLTADEQKTLDT  454
            DS T K PPQVIAAAQYFR+HPD+WK +AGD  SMST+DFLQKSTSEMHLTA E KTLDT
Sbjct  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576

Query  455  INSHQDAFYGDGKEITRDKLDAISKDDKADPAVKQAATQLLADPLLFGLLNNSITGYKKP  514
            INSHQ+AF+GDGKE+TRDKLD+I KDDKADPAV++AA QLL+DPLLFGLLNN+ITGYKKP
Sbjct  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKP  636

Query  515  HHFFGGGHVVDSGKISQDDFRQFYDHMSAANKTVDTPATHEASSPDQQKAVADMLVGkdd  574
            H FFGGGHVVDSGKIS+ DF+QFY+HM+A NKT+DTP+TH A+SP+Q+KAVADML+GK D
Sbjct  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696

Query  575  ppaikkpkkdVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPIIGEIADAASIALESEA  634
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAA++A+ESEA
Sbjct  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEA  756

Query  635  QAAQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARIgakgvakgvaeaaakeaae  694
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+         A +AAK  AE
Sbjct  757  QAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARL--------AAKGAAKGVAE  808

Query  695  gaakgaakgtaksvakgggktaaERPSAAEFAKGYVGGTAISKSTEILKTPVLAGLHYEE  754
            GAAKGA++GT+K+ AKGGGK  AER  + ++AKGY+ GT+I+++TE+LKTPVLAGLHYEE
Sbjct  809  GAAKGATQGTTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEE  868

Query  755  YQLDKQ-KDGEIHQKMENAGGVPVGKQIIPKGIADNFEGD  793
             +LDK+ K GEI++++E AGGVP+GKQ+IPK+IADNFE+D
Sbjct  869  VRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  307 bits (1151),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 205/410 (50%), Positives = 286/410 (70%), Gaps = 43/410 (10%)

Query  43   TMDNIF-QRIYLLLEALQANTPNSASGNAPANTASGDADTQLSASDWQATQPIEKRTSWP  101
            +MDN+F Q+IY L+ A  +NT+ +++G++ +   +  AD      D QA+QPIEKRTSWP
Sbjct  42   AMDNLFLQQIYRLIAATYGNTSLNGPGSGIPGLDTPSAD------DLQASQPIEKRTSWP  95

Query  102  SLGYDFDPKHIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDK  161
            +L+  F+ K+IKG   PPA++GS+VTW++GTLT SELQIVSTLN HKD+ PLE+ +LDDK
Sbjct  96   TLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDK  155

Query  162  INDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKISAQDLWDFSDSHPQVKELGGK  221
            INDPSTP+DLK+ALQGL++DPRLFFAIGSQGDGKCGGKI A DLWDF+D H QV  LGGK
Sbjct  156  INDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGK  215

Query  222  NDEFNPKNIKGSNPPPAAEGSTVTWNEGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKI  281
            N EFNPKNIKG+ PPPAAEGS+VTW+ G L QS+LEIVS L++H+D + ++ F +LD KI
Sbjct  216  NAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMM-PIEFAKLDEKI  274

Query  282  NDPSTQPDLKKALQGLQKDPRLFFAIGSQ--------KDGKCGGKIKAQDLTDFSYYHPQ  333
            NDP+T PDLKKALQGLQ+DP LFFA++SQ         +GKC GK+ A++L DF+  HPQ
Sbjct  275  NDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQ  334

Query  334  IAEYNDKQAKSYTQNYIASDSPDKTKASVMTKSDALRELYRYSDYLPGNLSEDEFAKIVD  393
            ++   +K+A +Y        +P+K K+  +  +     + + +    G L+++E+  +  
Sbjct  335  VTAQGGKNA-TY--------NPEKMKGRDLPPPVDGSSVTWDG----GTLTQNELEIVAT  381

Query  394  GDSKTGKCPPQVIAAAQYFRDHPDEWKEFAGDSGSMSTPDFLQKSTSEMH  443
             +   +KCP +              W ++ + S   + P  LQK+ ++++
Sbjct  382  LNRHKDKCPVK--------------WTDLDAKSKDPAIPPDLQKAFADLQ  417

6) XAC29_02025 in NC_020800


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  695 bits (2628),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 474/691 (69%), Positives = 589/691 (86%), Gaps = 16/691 (2%)

Query  67   DFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDP  126
            +F+PK+IKG  +PPA EGS+VTW+GGTLT S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  127  STPADLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKIKAQDLWDFSDSHPQVKA  178
            +TP+DLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV A
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  179  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  238
             GGKN  +NP  +KG   PP+VDGSSVTWDGGTLTQNELEIV+TLNRHKD+CP+KW+DLD
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLD  397

Query  239  AKINDPSTPPDLKKALTDLQSDPRLFFAIGSQgdgkcggki-kdgdlgkFV--SHHAQVA  295
            AK +DP+ PPDL+KA++DLQ DP LF AIG+QG     +    + DL +F     HAQ+A
Sbjct  398  AKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIA  457

Query  296  EYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGE  355
            +YA++QAK YTQNYVASDSPDKT ++VM ESDAMRELYRYSDYLP DLNQD+FK LV+G+
Sbjct  458  QYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGD  517

Query  356  SSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTI  415
            S+TKK PPQVIAAAQYFR+HPDQWKALAGD  SMS +DFLQK++SE+HLTA E KTLDTI
Sbjct  518  STTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTI  577

Query  416  NSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQllndpllfgllnnSITGYKKPH  475
            NSHQ+AF+GDGKEVTRDKLD+I KDDKADPAV++AA QLL DPLLFGLLNN+ITGYKKPH
Sbjct  578  NSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPH  637

Query  476  RFFGGGHVVDSGKISKDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddp  535
             FFGGGHVVDSGKIS+ DF++FY++M+A NKT+D P TH A+S+EQ+KAV+DMLMGK D 
Sbjct  638  SFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQ  697

Query  536  paikkpkkdVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQ  595
            P IK+ K DVG F  GLHEFLKWDSKILD +SV+LSA+NGIP+IGE++DAA++A+ESEAQ
Sbjct  698  PEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQ  757

Query  596  AAQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARI----gakavakgvaeaaakg  651
            AAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    +AK+VA G A +A++G
Sbjct  758  AAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQG  817

Query  652  takgvakgagrtaaERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQ-KE  710
            T+KG AKG+G+  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE RLDK+ K 
Sbjct  818  TTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKK  877

Query  711  GEIHQKMENAGGIPMGKQIVPTNVANNFEGD  741
            GEI++++E AGG+P+GKQ++P  +A+NFE+D
Sbjct  878  GEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  301 bits (1127),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 185/271 (69%), Positives = 226/271 (84%), Gaps = 11/271 (4%)

Query  1    MDDIFLL-IYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRT  59
            MD++FL  IY+L+AA  T + TS +G GS+ +   +PS+D        D QA+QPIEKRT
Sbjct  43   MDNLFLQQIYRLIAA--TYGNTSLNGPGSGIPGLDTPSAD--------DLQASQPIEKRT  92

Query  60   SWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNL  119
            SWP+L+  F+ KDIKG   PPA++GS+VTW+GGTLTPSELQIVSTLN HKD+ PLE+ +L
Sbjct  93   SWPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKL  152

Query  120  DDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAM  179
            DDKINDPSTP+DLK+ALQGL++DPRLFFAIGSQGDGKCGGKIKA DLWDF+D H QV A+
Sbjct  153  DDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTAL  212

Query  180  GGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDA  239
            GGKN +FNPK+IKG+TPPPA +GSSVTWDGGTLTQ++LEIVSTLN+H+D  P+  + LD 
Sbjct  213  GGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDE  272

Query  240  KINDPSTPPDLKKALTDLQSDPRLFFAIGSQ  270
            KINDP+TPPDLKKAL +LQ DP LFFA++SQ
Sbjct  273  KINDPATPPDLKKALQGLQQDPGLFFAMASQ  303

7) hrpF in NC_020815


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  695 bits (2630),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 474/691 (69%), Positives = 589/691 (86%), Gaps = 16/691 (2%)

Query  110  DFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDP  169
            +F+PK+IKG  +PPA EGS+VTW+GGTLT S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  170  STPADLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKIKAQDLWDFSDSHPQVKA  221
            +TP+DLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV A
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  222  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  281
             GGKN  +NP  +KG   PP+VDGSSVTWDGGTLTQNELEIV+TLNRHKD+CP+KW+DLD
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLD  397

Query  282  AKINDPSTPPDLKKALTDLQSDPRLFFAIGSQgdgkcggki-kdgdlgkFV--SHHAQVA  338
            AK +DP+ PPDL+KA++DLQ DP LF AIG+QG     +    + DL +F     HAQ+A
Sbjct  398  AKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIA  457

Query  339  EYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGE  398
            +YA++QAK YTQNYVASDSPDKT ++VM ESDAMRELYRYSDYLP DLNQD+FK LV+G+
Sbjct  458  QYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGD  517

Query  399  SSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTI  458
            S+TKK PPQVIAAAQYFR+HPDQWKALAGD  SMS +DFLQK++SE+HLTA E KTLDTI
Sbjct  518  STTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTI  577

Query  459  NSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQllndpllfgllnnSITGYKKPH  518
            NSHQ+AF+GDGKEVTRDKLD+I KDDKADPAV++AA QLL DPLLFGLLNN+ITGYKKPH
Sbjct  578  NSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPH  637

Query  519  RFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddp  578
             FFGGGHVVDSGKIS+ DF++FY++M+A NKT+D P TH A+S+EQ+KAV+DMLMGK D 
Sbjct  638  SFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQ  697

Query  579  paikkpkkdVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQ  638
            P IK+ K DVG F  GLHEFLKWDSKILD +SV+LSA+NGIP+IGE++DAA++A+ESEAQ
Sbjct  698  PEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQ  757

Query  639  AAQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARI----gakavakgvaeaaakg  694
            AAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    +AK+VA G A +A++G
Sbjct  758  AAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQG  817

Query  695  takgvakgagrtaaERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQ-KE  753
            T+KG AKG+G+  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE RLDK+ K 
Sbjct  818  TTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKK  877

Query  754  GEIHQKMENAGGIPMGKQIVPTNVANNFEGD  784
            GEI++++E AGG+P+GKQ++P  +A+NFE+D
Sbjct  878  GEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  305 bits (1142),  Expect = 9e-84, Method: Compositional matrix adjust.
 Identities = 209/315 (67%), Positives = 260/315 (83%), Gaps = 14/315 (4%)

Query  1    MSLNTLSTGSNPSQLLGTPL-NEsdssellgsdsskddsdlpsTMDDIFLL-IYQLLAAL  58
            MSLNTLSTGS ++ +L  PL +++ S+ LLGSDS+ +DSDL  +MD++FL  IY+L+AA 
Sbjct  1    MSLNTLSTGSTAGLFL--PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAA-  57

Query  59   QTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKG  118
             T + TS +G GS+ +   +PS+D        D QA+QPIEKRTSWP+L+  F+ KDIKG
Sbjct  58   -TYGNTSLNGPGSGIPGLDTPSAD--------DLQASQPIEKRTSWPTLSAPFNVKDIKG  108

Query  119  KDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAA  178
               PPA++GS+VTW+GGTLTPSELQIVSTLN HKD+ PLE+ +LDDKINDPSTP+DLK+A
Sbjct  109  SRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSA  168

Query  179  LQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGST  238
            LQGL++DPRLFFAIGSQGDGKCGGKIKA DLWDF+D H QV A+GGKN +FNPK+IKG+T
Sbjct  169  LQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGAT  228

Query  239  PPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALT  298
            PPPA +GSSVTWDGGTLTQ++LEIVSTLN+H+D  P+  + LD KINDP+TPPDLKKAL 
Sbjct  229  PPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQ  288

Query  299  DLQSDPRLFFAIGSQ  313
            +LQ DP LFFA++SQ
Sbjct  289  GLQQDPGLFFAMASQ  303

8) hrpF in NC_003919


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  693 bits (2621),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 476/691 (69%), Positives = 592/691 (86%), Gaps = 16/691 (2%)

Query  137  DFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDP  196
            +F+PK+IKG  +PPA EGS+VTW+GGTLT S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  197  STPADLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKIKAQDLWDFSDSHPQVKA  248
            +TP+DLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV A
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  249  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  308
             GGKN  +NP  +KG   PP+VDGSSVTWDGGTLTQNELEIV+TLNRHKD+CP+KW+DLD
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLD  397

Query  309  AKINDPSTPPDLKKALTDLQSDPRLFFAIGSQgdgkc-ggkikdgdlgkFV--SHHAQVA  365
            AK +DP+ PPDL+KA++DLQ DP LF AIG+QG     +GK+ + DL +F     HAQ+A
Sbjct  398  AKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIA  457

Query  366  EYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGE  425
            +YA++QAK YTQNYVASDSPDKT ++VM ESDAMRELYRYSDYLP DLNQD+FK LV+G+
Sbjct  458  QYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGD  517

Query  426  SSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTI  485
            S+TKK PPQVIAAAQYFR+HPDQWKALAGD  SMS +DFLQK++SE+HLTA E KTLDTI
Sbjct  518  STTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTI  577

Query  486  NSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQllndpllfgllnnSITGYKKPH  545
            NSHQ+AF+GDGKEVTRDKLD+I KDDKADPAV++AA QLL DPLLFGLLNN+ITGYKKPH
Sbjct  578  NSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPH  637

Query  546  RFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddp  605
             FFGGGHVVDSGKIS+ DF++FY++M+A NKT+D P TH A+S+EQ+KAV+DMLMGK D 
Sbjct  638  SFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQ  697

Query  606  paikkpkkdVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQ  665
            P IK+ K DVG F  GLHEFLKWDSKILD +SV+LSA+NGIP+IGE++DAA++A+ESEAQ
Sbjct  698  PEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQ  757

Query  666  AAQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARI----gakavakgvaeaaakg  721
            AAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    +AK+VA G A +A++G
Sbjct  758  AAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQG  817

Query  722  takgvakgagrtaaERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQ-KE  780
            T+KG AKG+G+  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE RLDK+ K 
Sbjct  818  TTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKK  877

Query  781  GEIHQKMENAGGIPMGKQIVPTNVANNFEGD  811
            GEI++++E AGG+P+GKQ++P  +A+NFE+D
Sbjct  878  GEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  304 bits (1140),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 209/315 (67%), Positives = 260/315 (83%), Gaps = 14/315 (4%)

Query  28   MSLNTLSTGSNPSQLLGTPL-NEsdssellgsdsskddsdlpsTMDDIFLL-IYQLLAAL  85
            MSLNTLSTGS ++ +L  PL +++ S+ LLGSDS+ +DSDL  +MD++FL  IY+L+AA 
Sbjct  1    MSLNTLSTGSTAGLFL--PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAA-  57

Query  86   QTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKG  145
             T + TS +G GS+ +   +PS+D        D QA+QPIEKRTSWP+L+  F+ KDIKG
Sbjct  58   -TYGNTSLNGPGSGIPGLDTPSAD--------DLQASQPIEKRTSWPTLSAPFNVKDIKG  108

Query  146  KDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAA  205
               PPA++GS+VTW+GGTLTPSELQIVSTLN HKD+ PLE+ +LDDKINDPSTP+DLK+A
Sbjct  109  SRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSA  168

Query  206  LQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGST  265
            LQGL++DPRLFFAIGSQGDGKCGGKIKA DLWDF+D H QV A+GGKN +FNPK+IKG+T
Sbjct  169  LQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGAT  228

Query  266  PPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALT  325
            PPPA +GSSVTWDGGTLTQ++LEIVSTLN+H+D  P+  + LD KINDP+TPPDLKKAL 
Sbjct  229  PPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQ  288

Query  326  DLQSDPRLFFAIGSQ  340
            +LQ DP LFFA++SQ
Sbjct  289  GLQQDPGLFFAMASQ  303

9) hrpF in NC_017267


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  690 bits (2608),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 465/731 (64%), Positives = 610/731 (84%), Gaps = 18/731 (2%)

Query  72   ANTASGDADTQMSASD-WQATQPIEKRTSWPSLDYDFDPKNIKGKDAPPALEGSTVTWND  130
            ++ + G  + ++ A+D W+ ++  ++ T+  + + +F+PKNIKG  +PPA EGS+VTW++
Sbjct  183  GSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTWDG  242

Query  131  GTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAIGS  190
            GTLT+S+L+IVSTLN H+D MP+E+ +LD+KINDP+TPPDLK ALQGL+QDP LFFA++S
Sbjct  243  GTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAMAS  302

Query  191  QG--------DGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAEGS  242
            QG        +GKC GK+ A++L DF+D HPQV   GGKN  +NP  +KG + P + +GS
Sbjct  303  QGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVDGS  362

Query  243  TVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKEALKGLQKDPR  302
            +VTW++G L Q+ELEIV+ L+RHKD+  ++   +LDAK +DP+  PDL+ A+ +LQ+DP 
Sbjct  363  SVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDLDAKSKDPAIPPDLQKAFADLQQDPA  421

Query  303  LFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQIAEYNDKKAKSYTQNYIASDSPDKTK  359
            LF AIG+Q   G C+GK+  +DLT FS    H+QIA+Y +++AK+YTQNY+ASDSPDKT 
Sbjct  422  LFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKTE  481

Query  360  ASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEW  419
            ++VMT SDA+RE+YRYSDYLP +L++D F ++V+GDS T K PPQ+IAAAQYFR+HPD+W
Sbjct  482  PTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQW  541

Query  420  KEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISK  479
            K ++GD  +MST+DFLQKSTSEMHLTA E KTLDTINSHQ+AF+GDGKE+TRDKLD+I K
Sbjct  542  KALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIVK  601

Query  480  DDKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYD  539
            DDKADPAV++AA QL +DPLLFGLLNN+ITGYKKPH FFGGGHVVDSGKIS++DF+QFY+
Sbjct  602  DDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFYE  661

Query  540  HMSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFLKWD  599
            HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D P IK+ K DVGTF +GLHEFLKWD
Sbjct  662  HMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKWD  721

Query  600  SKILDWMSVGLSALNGIPVIGEIADAASIALESEAQAAQVVDTAIQGGDMSLALKLAGIN  659
            SKILD +SV+LSA+NGIP+IGE+ADAA++A+ESEAQAAQV+DTA+QGG++SLA KLAGIN
Sbjct  722  SKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGIN  781

Query  660  MagavvgavggPTARIgakgaakgvaevaakeaaegaakgtakgaakgagktaaeRPSAA  719
            MAGAVVGAVGGPTAR+    AAKG A   A  AA GA++GT+KGAAKG+GK  AER  + 
Sbjct  782  MAGAVVGAVGGPTARL----AAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPL  837

Query  720  EFAKGYVAGSNISKSTEILKTPVMAGLHYEEYQLDKQ-KDGEIHQKLEHAGGVPVGKQII  778
            ++AKGY+ G++I+++TE+LKTPV+AGLHYEE +LDK+ K GEI+++LE AGGVP+GKQ+I
Sbjct  838  DIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEIRKNLEAAGGVPLGKQFI  897

Query  779  PKGIADNFEGD  789
            PK+IADNFE+D
Sbjct  898  PKAIADNFEAD  908


 Score =  304 bits (1141),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 202/415 (49%), Positives = 284/415 (69%), Gaps = 45/415 (10%)

Query  39   DLPSTMDTLF-QQIY-LVLAALQANTQTGASGDTPANTASGDADTQMSASDWQATQPIEK  96
            DL  +MD LF QQIY L+ A+    +  G++++ P+  ++       SA D QA+QPIEK
Sbjct  38   DLLLAMDNLFLQQIYRLIAATYGNTSLNGPGSGIPGLDTP-------SADDLQASQPIEK  90

Query  97   RTSWPSLDYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYK  156
            RTSWP+L   F+ K+IKG   PPA++GS+VTW++GTLT SELQIVSTLN HKD+ PLE+ 
Sbjct  91   RTSWPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFA  150

Query  157  NLDDKINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVK  216
            +LDDKINDPSTPPDLK+ALQGL++DPRLFFAIGSQGDGKCGGK+ A DLWDF+D H QV 
Sbjct  151  KLDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVT  210

Query  217  DLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQ  276
             LGGKN EFNPK+IKG+ PP AAEGS+VTW++G L QS+LEIVS L++H+D + ++ F +
Sbjct  211  ALGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMM-PIEFAK  269

Query  277  LDAKINDPSTQPDLKEALKGLQKDPRLFFAIGSQ--------KDGKCGGKIKAQDLTDFS  328
            LD KINDP+T PDLK AL+GLQ+DP LFFA++SQ         +GKC GK+ A++L DF+
Sbjct  270  LDEKINDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFA  329

Query  329  YYHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEF  388
              HPQ++   +K+A +Y        +P+K K+  +  +     + + +    G L+++E+
Sbjct  330  DRHPQVTAQGGKNA-TY--------NPEKMKGRDLPPPVDGSSVTWDG----GTLTQNEL  376

Query  389  AKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMH  443
              +   +   +KCP +              W ++ + +   + P  LQK+ ++++
Sbjct  377  EIVATLNRHKDKCPVK--------------WTDLDAKSKDPAIPPDLQKAFADLQ  417

10) hrpF in NC_016010


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  664 bits (2510),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 468/700 (67%), Positives = 596/700 (86%), Gaps = 21/700 (3%)

Query  110  DFDPKHIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDP  169
            +F+PK+IKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  170  STPADLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKISAQDLWDFSDSHPQVKE  221
            +TP+DLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV  
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  222  LGGKNDEFNPKNIKGSNPPPAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  281
             GGKN  +NP ++KG + PP+ +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396

Query  282  DAKINDPSTQPDLKKALQGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  338
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456

Query  339  AEYNDKQAKSYTQNYIASDSPDKTKASVMTKSDALRELYRYSDYLPGNLSEDEFAKIVDG  398
            A+Y ++QAK+YTQNY+ASDSPDKT ++VMT SDA+RELYRYSDYLP +L++D F ++V+G
Sbjct  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516

Query  399  DSKTGKCPPQVIAAAQYFRDHPDEWKEFAGDSGSMSTPDFLQKSTSEMHLTADEQKTLDT  458
            DS T K PPQVIAAAQYFR+HPD+WK +AGD  SMST+DFLQKSTSEMHLTA E KTLDT
Sbjct  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576

Query  459  INSHQDAFYGDGKEITRdkldaiakddkadpavkqaaTQLLADPLLFGLLNNSITGYKKP  518
            INSHQ+AF+GDGKE+TRDKLD+I KDDKADPAV++AA QLL+DPLLFGLLNN+ITGYKKP
Sbjct  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKP  636

Query  519  HHFFGGGHVVDSGKISQDDFRQFYDHMSAANKTVDTPATHEASSPDQQKAVADMLVGkdd  578
            H FFGGGHVVDSGKIS+ DF+QFY+HM+A NKT+DTP+TH A+SP+Q+KAVADML+GK D
Sbjct  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696

Query  579  ppaikkpkkdVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPIIGEIADAASIALESEA  638
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAA++A+ESEA
Sbjct  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEA  756

Query  639  QAAQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARIGARIgakgvaeaaakgaae  698
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR++A+         AAKG AE
Sbjct  757  QAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKG--------AAKGVAE  808

Query  699  gaakgtakgtakgvakgggktaaeRPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEE  758
            GAAKG+++GT+KG AKGGGK  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE
Sbjct  809  GAAKGATQGTTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEE  868

Query  759  YQLDKQ-KDGQIHQKLENAGGVPVGKQIIPKGIADNFEGD  797
             +LDK+ K G+I+++LE AGGVP+GKQ+IPK+IADNFE+D
Sbjct  869  VRLDKEKKKGEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  300 bits (1123),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 193/369 (53%), Positives = 263/369 (72%), Gaps = 36/369 (9%)

Query  87   SSASDDQATQPIEKRTSWPSLGYDFDPKHIKGKDAPPALEGSTVTWNDGTLTKSELQIVS  146
            +SA D QA+QPIEKRTSWP+L+  F+ K+IKG   PPA++GS+VTW++GTLT SELQIVS
Sbjct  77   PSADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVS  136

Query  147  TLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKISA  206
            TLN HKD+ PLE+ +LDDKINDPSTP+DLK+ALQGL++DPRLFFAIGSQGDGKCGGKI A
Sbjct  137  TLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKA  196

Query  207  QDLWDFSDSHPQVKELGGKNDEFNPKNIKGSNPPPAAEGSTVTWNDGQLNQSELEIVSVL  266
             DLWDF+D H QV  LGGKN EFNPKNIKG+ PPPAAEGS+VTW++G L QS+LEIVS L
Sbjct  197  GDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTL  256

Query  267  DRHKDQVDSLSFDQLDAKINDPSTQPDLKKALQGLQKDPRLFFAIGSQ--------KDGK  318
            ++H+D + ++ F +LD KINDP+T PDLKKALQGLQ+DP LFFA++SQ         +GK
Sbjct  257  NQHRDMM-PIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGK  315

Query  319  CGGKIKAQDLTDFSYYHPQIAEYNDKQAKSYTQNYIASDSPDKTKASVMTKSDALRELYR  378
            C GK+ A++L DF+  HPQ++   +K+A +Y        +P+K K+  +  +     + +
Sbjct  316  CNGKLIADNLYDFADRHPQVTAQGGKNA-TY--------NPEKMKGRDLPPPVDGSSVTW  366

Query  379  YSDYLPGNLSEDEFAKIVDGDSKTGKCPPQVIAAAQYFRDHPDEWKEFAGDSGSMSTPDF  438
             +    G L+++E+  +   +   +KCP +              W ++ + S   + P  
Sbjct  367  DG----GTLTQNELEIVATLNRHKDKCPVK--------------WTDLDAKSKDPAIPPD  408

Query  439  LQKSTSEMH  447
            LQK+ ++++
Sbjct  409  LQKAFADLQ  417

11) XOO_0109 in NC_007705


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  662 bits (2504),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 453/692 (66%), Positives = 582/692 (85%), Gaps = 21/692 (3%)

Query  106  DFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDP  165
            +F+PKNIKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MPIE+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  166  STPPDLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKVSAQDLWDFSDSHPQVKD  217
            +TPPDLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV  
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  218  LGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  277
             GGKN  +NP  +KG + P + +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396

Query  278  DAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  334
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456

Query  335  AEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDG  394
            A+Y +++AK+YTQNY+ASDSPDKT ++VMT SDA+RE+YRYSDYLP +L++D F ++V+G
Sbjct  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516

Query  395  DSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDT  454
            DS T K PPQ+IAAAQYFR+HPD+WK ++GD  +MST+DFLQKSTSEMHLTA E KTLDT
Sbjct  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576

Query  455  INSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKP  514
            INSHQ+AF+GDGKE+TRDKLD+I KD+KADPAV++AA QL +DPLLFGLLNN+ITGYKKP
Sbjct  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKP  636

Query  515  HHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGkdd  574
            H FFGGGHVVDSGKIS++DF+QFY+HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D
Sbjct  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696

Query  575  ppaikkpkkdVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVigeiadaaaialesea  634
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAAA+A+ESEA
Sbjct  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEA  756

Query  635  qaaQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARI--------gakeaaegaak  686
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+         A  AA GA++
Sbjct  757  QAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQ  816

Query  687  gtakgaakgagktaaeRPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQ-K  745
            GT+KGAAKG+GK  AER  +  +AKGY+ G++I+++TE+LK PV+AGLHYEE +LDK+ K
Sbjct  817  GTTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKK  876

Query  746  DGEIHQKLDNAGGAPVGKQIIPTGIADNFEGD  777
             GEI+++L+ AGG P+GKQ+IP +IADNFE+D
Sbjct  877  KGEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  297 bits (1111),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 188/368 (52%), Positives = 261/368 (71%), Gaps = 36/368 (9%)

Query  84   SASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVST  143
            SA D QA+QPIEKRTSWP+L+  F+ K+IKG   PPA++GS+VTW++GTLT SELQIVST
Sbjct  78   SADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVST  137

Query  144  LNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQ  203
            LN HKD+ P+E+ +LDDKINDPSTPPDLK+ALQGL++DPRLFFAIGSQGDGKCGGK+ A 
Sbjct  138  LNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAG  197

Query  204  DLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLD  263
            DLWDF+D H QV  LGGKN EFNPK+IKG+ PP AAEGS+VTW++G L QS+LEIVS L+
Sbjct  198  DLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLN  257

Query  264  RHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ--------KDGKC  315
            +H+D + ++ F +LD KINDP+T PDLKKAL+GLQ+DP LFFA++SQ         +GKC
Sbjct  258  QHRDMM-PIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKC  316

Query  316  GGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRY  375
             GK+ A++L DF+  HPQ++   +K+A +Y        +P+K K+  +  +     + + 
Sbjct  317  NGKLIADNLYDFADRHPQVTAQGGKNA-TY--------NPEKMKGRDLPPPVDGSSVTWD  367

Query  376  SDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFL  435
            +    G L+++E+  +   +   +KCP +              W ++ + +   + P  L
Sbjct  368  G----GTLTQNELEIVATLNRHKDKCPVK--------------WTDLDAKSKDPAIPPDL  409

Query  436  QKSTSEMH  443
            QK+ ++++
Sbjct  410  QKAFADLQ  417

12) hrpF in NC_010717


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  661 bits (2498),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 457/696 (66%), Positives = 587/696 (85%), Gaps = 17/696 (2%)

Query  106  DFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDP  165
            +F+PKNIKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MPIE+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  166  STPPDLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKVSAQDLWDFSDSHPQVKD  217
            +TPPDLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV  
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  218  LGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  277
             GGKN  +NP  +KG + P + +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396

Query  278  DAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  334
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456

Query  335  AEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDG  394
            A+Y +++AK+YTQNY+ASDSPDKT ++VMT SDA+RE+YRYSDYLP +L++D F ++V+G
Sbjct  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516

Query  395  DSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDT  454
            DS T K PPQ+IAAAQYFR+HPD+WK ++GD  +MST+DFLQKSTSEMHLTA E KTLDT
Sbjct  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576

Query  455  INSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKP  514
            INSHQ+AF+GDGKE+TRDKLD+I KD+KADPAV++AA QL +DPLLFGLLNN+ITGYKKP
Sbjct  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKP  636

Query  515  HHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGkdd  574
            H FFGGGHVVDSGKIS++DF+QFY+HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D
Sbjct  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696

Query  575  ppaikkpkkdVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVigeiadaaaialesea  634
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAAA+A+ESEA
Sbjct  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEA  756

Query  635  qaaQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARIgakgaakgvaevaakeaae  694
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    AAKG A   A  AA 
Sbjct  757  QAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARL----AAKGAAKGVAEGAAK  812

Query  695  gaakgtakgsakgagktaaeRPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLD  754
            GA++GT+KG+AKG+GK  AER  +  +AKGY+ G++I+++TE+LK PV+AGLHYEE +LD
Sbjct  813  GATQGTTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLD  872

Query  755  KQ-KDGEIHQKLDNAGGAPVGKQIIPTGIADNFEGD  789
            K+ K GEI+++L+ AGG P+GKQ+IP +IADNFE+D
Sbjct  873  KEKKKGEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  297 bits (1111),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 188/368 (52%), Positives = 261/368 (71%), Gaps = 36/368 (9%)

Query  84   SASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVST  143
            SA D QA+QPIEKRTSWP+L+  F+ K+IKG   PPA++GS+VTW++GTLT SELQIVST
Sbjct  78   SADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVST  137

Query  144  LNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQ  203
            LN HKD+ P+E+ +LDDKINDPSTPPDLK+ALQGL++DPRLFFAIGSQGDGKCGGK+ A 
Sbjct  138  LNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAG  197

Query  204  DLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLD  263
            DLWDF+D H QV  LGGKN EFNPK+IKG+ PP AAEGS+VTW++G L QS+LEIVS L+
Sbjct  198  DLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLN  257

Query  264  RHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ--------KDGKC  315
            +H+D + ++ F +LD KINDP+T PDLKKAL+GLQ+DP LFFA++SQ         +GKC
Sbjct  258  QHRDMM-PIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKC  316

Query  316  GGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRY  375
             GK+ A++L DF+  HPQ++   +K+A +Y        +P+K K+  +  +     + + 
Sbjct  317  NGKLIADNLYDFADRHPQVTAQGGKNA-TY--------NPEKMKGRDLPPPVDGSSVTWD  367

Query  376  SDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFL  435
            +    G L+++E+  +   +   +KCP +              W ++ + +   + P  L
Sbjct  368  G----GTLTQNELEIVATLNRHKDKCPVK--------------WTDLDAKSKDPAIPPDL  409

Query  436  QKSTSEMH  443
            QK+ ++++
Sbjct  410  QKAFADLQ  417

13) hrpF in NC_006834


> NC_007086_P1|25|G25|66769331|YP_244093.1|Xanthomonas_campestris_pv._campestris_str._8004|-|20329..23094|-|XC_3025|HrpF 
protein
Length=921

 Score =  659 bits (2492),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 457/696 (66%), Positives = 587/696 (85%), Gaps = 17/696 (2%)

Query  158  DFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDP  217
            +F+PKNIKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MPIE+ +LD+KINDP
Sbjct  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277

Query  218  STPPDLKAALQGLKQDPRLFFAIGSQG--------DGKCGGKVSAQDLWDFSDSHPQVKD  269
            +TPPDLK ALQGL+QDP LFFA++SQG        +GKC GK+ A++L DF+D HPQV  
Sbjct  278  ATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTA  337

Query  270  LGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  329
             GGKN  +NP  +KG + P + +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396

Query  330  DAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  386
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456

Query  387  AEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDG  446
            A+Y +++AK+YTQNY+ASDSPDKT ++VMT SDA+RE+YRYSDYLP +L++D F ++V+G
Sbjct  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516

Query  447  DSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDT  506
            DS T K PPQ+IAAAQYFR+HPD+WK ++GD  +MST+DFLQKSTSEMHLTA E KTLDT
Sbjct  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576

Query  507  INSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKP  566
            INSHQ+AF+GDGKE+TRDKLD+I KD+KADPAV++AA QL +DPLLFGLLNN+ITGYKKP
Sbjct  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKP  636

Query  567  HHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGkdd  626
            H FFGGGHVVDSGKIS++DF+QFY+HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D
Sbjct  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696

Query  627  ppaikkpkkdVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVigeiadaaaialesea  686
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAAA+A+ESEA
Sbjct  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEVADAAALAFESEA  756

Query  687  qaaQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARIgakgaakgvaevaakeaae  746
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    AAKG A   A  AA 
Sbjct  757  QAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARL----AAKGAAKGVAEGAAK  812

Query  747  gaakgtakgaakgagktaaeRPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLD  806
            GA++GT+KGAAKG+GK  AER  +  +AKGY+ G++I+++TE+LK PV+AGLHYEE +LD
Sbjct  813  GATQGTTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLD  872

Query  807  KQ-KDGEIHQKLDNAGGAPVGRQIIPTGIADNFEGD  841
            K+ K GEI+++L+ AGG P+G+Q+IP +IADNFE+D
Sbjct  873  KEKKKGEIRKNLEAAGGVPLGKQFIPKAIADNFEAD  908


 Score =  297 bits (1113),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 188/368 (52%), Positives = 261/368 (71%), Gaps = 36/368 (9%)

Query  136  SASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVST  195
            SA D QA+QPIEKRTSWP+L+  F+ K+IKG   PPA++GS+VTW++GTLT SELQIVST
Sbjct  78   SADDLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVST  137

Query  196  LNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQ  255
            LN HKD+ P+E+ +LDDKINDPSTPPDLK+ALQGL++DPRLFFAIGSQGDGKCGGK+ A 
Sbjct  138  LNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAG  197

Query  256  DLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLD  315
            DLWDF+D H QV  LGGKN EFNPK+IKG+ PP AAEGS+VTW++G L QS+LEIVS L+
Sbjct  198  DLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLN  257

Query  316  RHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ--------KDGKC  367
            +H+D + ++ F +LD KINDP+T PDLKKAL+GLQ+DP LFFA++SQ         +GKC
Sbjct  258  QHRDMM-PIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKC  316

Query  368  GGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRY  427
             GK+ A++L DF+  HPQ++   +K+A +Y        +P+K K+  +  +     + + 
Sbjct  317  NGKLIADNLYDFADRHPQVTAQGGKNA-TY--------NPEKMKGRDLPPPVDGSSVTWD  367

Query  428  SDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFL  487
            +    G L+++E+  +   +   +KCP +              W ++ + +   + P  L
Sbjct  368  G----GTLTQNELEIVATLNRHKDKCPVK--------------WTDLDAKSKDPAIPPDL  409

Query  488  QKSTSEMH  495
            QK+ ++++
Sbjct  410  QKAFADLQ  417