Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of pilV gene of NC_004631_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) pilV
( NP_458638.1 )

prepilin

NC_003198
(Salmonella enterica CT18)

0.0

100

2) STBHUCCB_45010
( YP_005219921.1 )

PilV2

NC_016832
(Salmonella enterica P-stx-12)

0.0

100

3) pilV
( NP_807849.1 )

prepilin

NC_004631
(Salmonella enterica Ty2)

0.0

100

4) TY21A_21640
( YP_007928488.1 )

prepilin

NC_021176
(Salmonella enterica Ty21a)

0.0

100

5) pilV
( NP_928387.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

3e-87

6) WFL_23640
( YP_006176106.1 )

pre-pilin pilV

NC_017665
(Escherichia coli W)

9e-87

7) EKO11_4728
( YP_005280345.1 )

shufflon protein B'

NC_016904
(Escherichia coli KO11FL)

1e-86

8) pilV
( YP_006127337.1 )

Type IVB thin prepilin adhesin

NC_017637
(Escherichia coli W)

1e-86

9) UMNK88_pIncI175
( YP_006137021.1 )

IncI1 shufflon protein

NC_017642
(Escherichia coli UMNK88)

8e-86

10) SEEH1578_00615
( YP_008248859.1 )

shufflon protein A'

NC_021811
(Salmonella enterica 41578)

1e-85

11) pilV
( YP_006203606.1 )

typeIV prepilin

NC_017718
(Salmonella enterica SL1344)

9e-86

12) O3K_25677
( YP_006781733.1 )

shufflon protein A

NC_018659
(Escherichia coli 2011C-3493)

2e-85

13) SeHA_A0109
( YP_002043944.1 )

shufflon protein B'

NC_011081
(Salmonella enterica SL476)

1e-84

14) ECSE_P1-0107
( YP_002296132.1 )

shufflon protein

NC_011419
(Escherichia coli SE11)

3e-84

15) CFSAN002069_23030
( YP_008253309.1 )

Shufflon protein A

NC_021813
(Salmonella enterica CFSAN002069)

8e-84

16) EJP617_06700
( YP_005817238.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

4e-80

17) SPAB_05365
( YP_001591471.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-78

18) YE3498
( YP_001007659.1 )

putative type IV pilus protein

NC_008800
(Yersinia enterocolitica 8081)

7e-79

19) ECL_00424
( YP_003610939.1 )

shufflon protein

NC_014121
(Enterobacter cloacae ATCC 13047)

9e-79

20) Ser39006_1490
( YP_008521872.1 )

shufflon domain protein

NC_022268
(Serratia sp. ATCC 39006)

4e-77

21) PAGR_g3865
( YP_005994573.1 )

bacterial shufflon protein

NC_017554
(Pantoea ananatis PA13)

4e-75

22) pilV
( YP_005197429.1 )

shufflon protein

NC_016816
(Pantoea ananatis LMG 5342)

1e-72

23) YpsIP31758_3727
( YP_001402681.1 )

shufflon protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-72

• Sequence Alignments

1) pilV in NC_003198


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  661 bits (2498),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 435/435 (100%), Positives = 435/435 (100%), Gaps = 0/435 (0%)

Query  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60
            MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV
Sbjct  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60

Query  61   GKFYPtvlasattttpavvttQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120
            GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG
Sbjct  61   GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120

Query  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180
            MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA
Sbjct  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180

Query  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240
            VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN
Sbjct  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240

Query  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300
            FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG
Sbjct  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300

Query  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360
            GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN
Sbjct  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360

Query  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420
            FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG
Sbjct  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420

Query  421  GTISVTCLNLPGAGL  435
            GTISVTCLNLPGAGL
Sbjct  421  GTISVTCLNLPGAGL  435

2) STBHUCCB_45010 in NC_016832


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  661 bits (2498),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 435/435 (100%), Positives = 435/435 (100%), Gaps = 0/435 (0%)

Query  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60
            MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV
Sbjct  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60

Query  61   GKFYPtvlasattttpavvttQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120
            GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG
Sbjct  61   GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120

Query  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180
            MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA
Sbjct  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180

Query  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240
            VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN
Sbjct  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240

Query  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300
            FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG
Sbjct  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300

Query  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360
            GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN
Sbjct  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360

Query  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420
            FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG
Sbjct  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420

Query  421  GTISVTCLNLPGAGL  435
            GTISVTCLNLPGAGL
Sbjct  421  GTISVTCLNLPGAGL  435

3) TY21A_21640 in NC_021176


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  661 bits (2498),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 435/435 (100%), Positives = 435/435 (100%), Gaps = 0/435 (0%)

Query  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60
            MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV
Sbjct  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60

Query  61   GKFYPtvlasattttpavvttQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120
            GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG
Sbjct  61   GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120

Query  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180
            MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA
Sbjct  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180

Query  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240
            VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN
Sbjct  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240

Query  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300
            FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG
Sbjct  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300

Query  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360
            GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN
Sbjct  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360

Query  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420
            FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG
Sbjct  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420

Query  421  GTISVTCLNLPGAGL  435
            GTISVTCLNLPGAGL
Sbjct  421  GTISVTCLNLPGAGL  435

4) pilV in NC_004631


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  661 bits (2498),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 435/435 (100%), Positives = 435/435 (100%), Gaps = 0/435 (0%)

Query  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60
            MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV
Sbjct  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60

Query  61   GKFYPtvlasattttpavvttQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120
            GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG
Sbjct  61   GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120

Query  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180
            MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA
Sbjct  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180

Query  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240
            VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN
Sbjct  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240

Query  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300
            FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG
Sbjct  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300

Query  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360
            GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN
Sbjct  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSSYRLN  360

Query  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420
            FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG
Sbjct  361  FNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEIHSNGSNGWYISNYRWGNYESG  420

Query  421  GTISVTCLNLPGAGL  435
            GTISVTCLNLPGAGL
Sbjct  421  GTISVTCLNLPGAGL  435

5) pilV in NC_005126


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  315 bits (1181),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 181/344 (53%), Positives = 263/344 (77%), Gaps = 6/344 (1%)

Query  2    LGTAAGLMILLVLSALGTRIYNDYLTEKSWQVMAAQSSRFSAASKAYIGRYYDRLRNSAT  61
            ++ +AGL+I+LV+++L++R   DYL  + WQV+A Q++RF+ A  +Y+G++Y  +  SAT
Sbjct  13   MSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKFYPTVLASAT  72

Query  62   TTQPVMITPDMLRKTGLLPSGFKDTNSSGQRYQTAVVRNTQDPALLQAMVVTQEGSPLPY  121
            TT P ++T +ML++TGLLP++F +TNS GQ+YQ+ +VRN Q+  LLQ+MVV++ G ++P+
Sbjct  73   TTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVVSRGGHAMPF  132

Query  122  KALRLISMDISTGLGGYIRDGKTATGAMSTWTVPLKDFGINSGEGHLAVLLSADELSTAR  181
             AL  IS DI++G+GGY+ DG+TA GAM +W +PL  +G ++G GHLAV+LS+D+LS AR
Sbjct  133  TALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVMLSTDDLSGAR  192

Query  182  EERDRLYRFAVPGRPELNKMHTDINMGGNNLNNTATVNA-----QAGHFSGDIRANAGQF  236
            E+ DRLYRF V GRP+LNKMHT I+MGGNNLN+ +TV A     Q G+F+  + +N+   
Sbjct  193  EDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGNFGVSLVSNGPIT  252

Query  237  Q-GDIRSHDGWVVTTKNKGWLNETYGGGWVMSDSNWLRSVNNKSVYTEGQIKSGTLRADG  295
              GDIRS +GW+VT   KGW++ET GGG  MSD++WLR +NNK+ YT G+I++G +R+DG
Sbjct  253  AGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTGGEIRGGKIRSDG  312

Query  296  RLSIGEFLQLDKVAVAGTACLPNGLVSRDSKGAILSCQSGLWTK  339
             +S G +L LDK+ VA+TAC  NG +SRD+ GA LSCQSG+W+ 
Sbjct  313  DVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSS  356

6) WFL_23640 in NC_017665


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  314 bits (1176),  Expect = 9e-87, Method: Compositional matrix adjust.
 Identities = 215/446 (49%), Positives = 314/446 (71%), Gaps = 37/446 (8%)

Query  6    KKYDRGWASLEIGAALLIVMIIVAWGAGIWQDYLKTKGWQAEARLVSNWASAARSYIGKN  65
            +K D G  ++ +GA+LLIV+++ + +A    DYLK++ WQ  A   +  + A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  66   YttlqassttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNTQNPELLQAMVV  125
            Y T+ AS+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  126  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  185
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  186  STDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvngv  245
            STD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  246  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  299
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  300  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  359
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  360  LSCQSGTWRTIGGKLKVTQLS-----NTGYLGQFDFCAIARMGNAEDAHYCQVVESPAGS  414
            LSCQSG W +   ++++  ++        Y+G   +CA + +  +  + + ++   + GS
Sbjct  347  LSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEI--HSNGS  404

Query  415  RKWY-------KYEHKTGCIASCVTL  433
              WY       +YE       +C+ L
Sbjct  405  NGWYISNYRWGNYESGGTISVTCLNL  430

7) EKO11_4728 in NC_016904


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  313 bits (1175),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 215/446 (49%), Positives = 314/446 (71%), Gaps = 37/446 (8%)

Query  2    KKYDRGWASLEIGAALLIVMIIVAWGAGIWQDYLKTKGWQAEARLVSNWASAARSYIGKN  61
            +K D G  ++ +GA+LLIV+++ + +A    DYLK++ WQ  A   +  + A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  62   YttlqassttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNTQNPELLQAMVV  121
            Y T+ AS+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  122  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  181
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  182  STDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvngv  241
            STD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  242  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  295
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  296  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  355
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  356  LSCQSGTWRTIGGKLKVTQLS-----NTGYLGQFDFCAIARMGNAEDAHYCQVVESPAGS  410
            LSCQSG W +   ++++  ++        Y+G   +CA + +  +  + + ++   + GS
Sbjct  347  LSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEI--HSNGS  404

Query  411  RKWY-------KYEHKTGCIASCVTL  429
              WY       +YE       +C+ L
Sbjct  405  NGWYISNYRWGNYESGGTISVTCLNL  430

8) pilV in NC_017637


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  313 bits (1175),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 215/446 (49%), Positives = 314/446 (71%), Gaps = 37/446 (8%)

Query  2    KKYDRGWASLEIGAALLIVMIIVAWGAGIWQDYLKTKGWQAEARLVSNWASAARSYIGKN  61
            +K D G  ++ +GA+LLIV+++ + +A    DYLK++ WQ  A   +  + A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  62   YttlqassttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNTQNPELLQAMVV  121
            Y T+ AS+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  122  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  181
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  182  STDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvngv  241
            STD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  242  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  295
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  296  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  355
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  356  LSCQSGTWRTIGGKLKVTQLS-----NTGYLGQFDFCAIARMGNAEDAHYCQVVESPAGS  410
            LSCQSG W +   ++++  ++        Y+G   +CA + +  +  + + ++   + GS
Sbjct  347  LSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEI--HSNGS  404

Query  411  RKWY-------KYEHKTGCIASCVTL  429
              WY       +YE       +C+ L
Sbjct  405  NGWYISNYRWGNYESGGTISVTCLNL  430

9) UMNK88_pIncI175 in NC_017642


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  311 bits (1164),  Expect = 8e-86, Method: Compositional matrix adjust.
 Identities = 203/368 (56%), Positives = 282/368 (77%), Gaps = 23/368 (6%)

Query  6    KKYDRGWASLEIGAALLIVMIIVAWGAGIWQDYLKTKGWQAEARLVSNWASAARSYIGKN  65
            +K D G  ++ +GA+LLIV+++ + +A    DYLK++ WQ  A   +  + A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  66   YttlqassttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNTQNPELLQAMVV  125
            Y T+ AS+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  126  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  185
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  186  STDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvngv  245
            STD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  246  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  299
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  300  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  359
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  360  LSCQSGTW  367
            LSCQSG W
Sbjct  347  LSCQSGIW  354

10) SEEH1578_00615 in NC_021811


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  310 bits (1162),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 213/446 (48%), Positives = 314/446 (71%), Gaps = 37/446 (8%)

Query  6    KKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGKN  65
            +K D G  ++  GA+LLIV+++ + +A    DY++++ WQ  A   +  T A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  66   YttlqgssttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMVV  125
            Y T+ +S+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  126  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  185
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  186  STDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvngv  245
            STD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  246  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  299
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  300  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  359
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  360  LSCQSGTWGTIGGKLKVTQLST-----TGYLGQFDFCAIARMGNAEDAHYCQVVESPAGS  414
            LSCQSG W++   ++++  ++        Y+G   +CA + +  +  + + ++   + GS
Sbjct  347  LSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEI--HSNGS  404

Query  415  RKWY-------KYEHKTGCIASCVTL  433
              WY       +YE       +C+ L
Sbjct  405  NGWYISNYRWGNYESGGTISVTCLNL  430

11) pilV in NC_017718


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  310 bits (1163),  Expect = 9e-86, Method: Compositional matrix adjust.
 Identities = 213/446 (48%), Positives = 314/446 (71%), Gaps = 37/446 (8%)

Query  2    KKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGKN  61
            +K D G  ++  GA+LLIV+++ + +A    DY++++ WQ  A   +  T A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  62   YttlqgssttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMVV  121
            Y T+ +S+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  122  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  181
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  182  STDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvngv  241
            STD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  242  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  295
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  296  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  355
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  356  LSCQSGTWGTIGGKLKVTQLST-----TGYLGQFDFCAIARMGNAEDAHYCQVVESPAGS  410
            LSCQSG W++   ++++  ++        Y+G   +CA + +  +  + + ++   + GS
Sbjct  347  LSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEI--HSNGS  404

Query  411  RKWY-------KYEHKTGCIASCVTL  429
              WY       +YE       +C+ L
Sbjct  405  NGWYISNYRWGNYESGGTISVTCLNL  430

12) O3K_25677 in NC_018659


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  309 bits (1160),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 201/371 (55%), Positives = 282/371 (77%), Gaps = 23/371 (6%)

Query  5    MKKYDRGWASLEIGAALLIVMIIVAWGAGIWQDYLKTKGWQAEARLVSNWASAARSYIGK  64
             +K D G  ++ +GA+LLIV+++ + +A    DYLK++ WQ  A   +  + A  SY+GK
Sbjct  3    KQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGK  62

Query  65   NYTTLQAssttstpavitttMLKNTGFLSSGFIETNSEGQRLQAYVVRNAQNPELLQAMV  124
             Y T+ AS+TT+TPAV+TT MLKNTG+L+++F ETNS GQ+ QA +VRN QN ELLQ+MV
Sbjct  63   FYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMV  122

Query  125  VSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVL  184
            VS GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+
Sbjct  123  VSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVM  182

Query  185  LSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNIGAVNAQtgnfsgnvng  244
            LSTD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN++G+V A           
Sbjct  183  LSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA-----------  231

Query  245  vngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSD  298
                  ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD
Sbjct  232  ------SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSD  285

Query  299  GSWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGA  358
              W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA
Sbjct  286  NDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGA  345

Query  359  ILSCQSGTWKT  369
             LSCQSG W +
Sbjct  346  TLSCQSGIWSS  356

13) SeHA_A0109 in NC_011081


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  307 bits (1149),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 201/368 (55%), Positives = 281/368 (77%), Gaps = 23/368 (6%)

Query  6    KKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGKN  65
            +K D G  ++  GA+LLIV+++ + +A    DY++++ WQ  A   +  T A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  66   YttlqgssttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMVV  125
            Y T+ +S+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  126  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  185
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  186  STDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvngv  245
            STD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  246  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  299
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  300  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  359
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  360  LSCQSGTW  367
            LSCQSG W
Sbjct  347  LSCQSGIW  354

14) ECSE_P1-0107 in NC_011419


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  305 bits (1143),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 211/446 (48%), Positives = 311/446 (70%), Gaps = 37/446 (8%)

Query  2    KKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGKN  61
            +K D G  ++  GA+LLIV+++ + +A    DY++++ WQ  A   +  T A  SY+GK 
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  62   YttlqgssttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMVV  121
            Y T+ +S+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MVV
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  122  SSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLL  181
            S GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  182  STYELSGAAEDTDRLYRFQVNGRPDLNKMHTVIDMGSNNLNNVGAVNAQtgnfsgnvngv  241
            ST +LSGA ED DRLYRFQVNGRPDLNKMHT IDMG+NNLN+VG+V A            
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA------------  231

Query  242  ngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDG  295
                 ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD 
Sbjct  232  -----SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDN  286

Query  296  SWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAI  355
             W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA 
Sbjct  287  DWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGAT  346

Query  356  LSCQSGTWRTIGGKLKVTQLS-----NTGYLGQFDFCAIARMGNAEDAHYCQVVESPAGS  410
            LSCQSG W +   ++++  ++        Y+G   +CA + +  +  + + ++   + GS
Sbjct  347  LSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCAWTYLNGSPLGGFQEI--HSNGS  404

Query  411  RKWY-------KYEHKTGCIASCVTL  429
              WY       +YE       +C+ L
Sbjct  405  NGWYISNYRWGNYESGGTISVTCLNL  430

15) CFSAN002069_23030 in NC_021813


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  304 bits (1140),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 201/371 (55%), Positives = 282/371 (77%), Gaps = 23/371 (6%)

Query  1    MKKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGK  60
             +K D G  ++  GA+LLIV+++ + +A    DY++++ WQ  A   +  T A  SY+GK
Sbjct  3    KQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGK  62

Query  61   NYttlqgssttttpavitttMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMV  120
             Y T+ +S+TTTTPAV+TT MLKNTG+L+++F+ETNS GQ+ QA +VRN QN ELLQ+MV
Sbjct  63   FYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMV  122

Query  121  VSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVL  180
            VS GG + P  AL Q++KDIT+G+GGY++DG+TA GA+RSW ++LS+YG+ +G GH+AV+
Sbjct  123  VSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVM  182

Query  181  LSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQtgnfsgnvng  240
            LSTD+LSGA ED DRLYRFQVNGRPDLNKMHTAIDMG+NNLN+VG+V A           
Sbjct  183  LSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTA-----------  231

Query  241  vngtfsgQVKGNSGNFDVN------VTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSD  294
                  ++V G++GNF+V+      +TAGGDIRS  GW++TR++KGW++ETHGGG+YMSD
Sbjct  232  ------SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSD  285

Query  295  GSWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGA  354
              W+R +NNKG+YTGG+++GG +R+DG + +G  L L++  VA+++C+ NG ++RD +GA
Sbjct  286  NDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGA  345

Query  355  ILSCQSGTWKT  365
             LSCQSG W +
Sbjct  346  TLSCQSGIWSS  356

16) EJP617_06700 in NC_017445


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 189/399 (48%), Positives = 277/399 (70%), Gaps = 20/399 (5%)

Query  5    KHTDRGWAILSTGVALIILLLVSSWGYSLVNDWLAKRTWINTAAQVSRFTQAVKSYTGRY  64
            KH D G   +S G +L+I+L+++S +   + D L  R W   A Q +RFTQAV SY G++
Sbjct  5    KH-DGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  65   YDMLLStatatapvtvtpaMLKNTGFLEQGFSETTSDGQSYRAAIVRNATNTDQLQALVY  124
            Y  +L++AT+T+P  VT  MLKNTG+L  +FSET S GQ Y+A IVRN  N + LQ++V 
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  125  TQNGAALPFLALRQISMDITSGMGGYIWTPGIATGAMSSWTVPLTSFGASTTQGHIAALL  184
            ++ G A+PF AL QIS DIT+G GGY+     A GAM SW +PL+S+G+ST +GH+A +L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  185  TSDELGAARGENDRLYRFSVTGKPDLNTMHTSIDMggnnlnntgtvnaenGNFSRNVAAG  244
            ++D+L++AR + DRLYRF V G+PDLN MHT+IDMG                 + N+ + 
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMG-----------------GNNLNSV  226

Query  245  ESVTAGGTVTGQDvnahgnvnagnaISANNDIRSNNGWLITRDGKGWLDESHGGGFYMSD  304
             +VTA + V+GQ+ N   ++ +  +I+A  DIRS  GW++TR GKGW+DE+HGGG+YMSD
Sbjct  227  GTVTA-SNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSD  285

Query  305  NDWVRVLNNKSLYTAGQVRGGSVRSDGNISAGGVLQPEQINYAGAACPQNGNISRDGSGS  364
            NDW+R+LNNK++YT+G++RGG +RSDG++SAGG+L  ++IN A++ACP NG ISRD +G+
Sbjct  286  NDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGA  345

Query  365  VLSCVNGVWKTTSITETVNGYGDVKCNNKSGQSI-AYCP  402
             LSC +G+W +  +   ++ +   K   +   ++ AYC+
Sbjct  346  TLSCQSGIWSSYRLNFNIQTFNVGKNVRNQYIGVHAYCA  384

17) SPAB_05365 in NC_010102


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  287 bits (1074),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 183/369 (50%), Positives = 261/369 (71%), Gaps = 18/369 (4%)

Query  5    KTTDRGWAILSTGASLIILLVVSVWGFTLISDWMQKRTWLNTASQVSRFTQAVKSYTGRY  64
            +  D G   +S GA+L+I+LV++  +   ++D ++ R W   A Q +RFTQAV SY G++
Sbjct  4    QKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKF  63

Query  65   YDTLLSSAttttpvtvtptMLKNTGFLEQGFSETTVDGQAYLAAVVRNATNTDQLQALVY  124
            Y T+L+SATTTTP  VT  MLKNTG+L  +FSET   GQ Y A +VRN  N + LQ++V 
Sbjct  64   YPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVV  123

Query  125  TQNGAALPFLALRQISMDITSGMGGYIWTSGTATGAMGSWTLPLSQFGISTTQGHIAALL  184
            ++ G A+PF AL QIS DIT+G GGY+  + TA GAM SW +PLS +G ST +GH+A +L
Sbjct  124  SRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVML  183

Query  185  TTDELGAARGENDRLYRFSVTGKPDLNTMHTSIDMggnnlnntgtinAVTGNFSGNVAAT  244
            +TD+L++AR + DRLYRF V G+PDLN MHT+IDMG                 + N+ + 
Sbjct  184  STDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMG-----------------GNNLNSV  226

Query  245  GNITANGTVTGQNVTAGSNVTAGNTITANNDIRSNNGWFITRGSKGWLNETYGGGFYMSD  304
            G +TA+  V+GQN   G ++ +   ITA  DIRS  GW++TR++KGW++ET GGG+YMSD
Sbjct  227  GTVTAS-NVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSD  285

Query  305  NDWVRVINNKNIYTSGQVRGGSVRADGRLSTGEVLQLEGVNTAGAVCSPNGLVSRDATGA  364
            NDW+R++NNK +YT+G++RGG +R+DG +S+G +L L+ +N A++ C+ NG +SRD++GA
Sbjct  286  NDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGA  345

Query  365  ILSCQSGVW  373
             LSCQSG+W
Sbjct  346  TLSCQSGIW  354

18) YE3498 in NC_008800


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  287 bits (1076),  Expect = 7e-79, Method: Compositional matrix adjust.
 Identities = 176/323 (55%), Positives = 251/323 (78%), Gaps = 7/323 (2%)

Query  36   GDYIKQKEYQVTAVQFSRFKSALKGYVGRHYDTLLVSAGTHQPVMVTTAMLKNTGFLPMG  95
            GDY+K +E QV A+Q +RF  A+ +YVG+ Y T+L SA T  P +VTT MLKNTG+LP +
Sbjct  34   GDYLKSREWQVVAMQTNRFTQAVSSYVGKFYPTVLASATTTTPAVVTTQMLKNTGLLPAS  93

Query  96   FSDTTTSGQRFQAAIVRNAMQKEQLQALIVTQGGHRLPYKALRLISADI-EGLGGYVWNN  154
            FS+T + GQ++QA IVRN  ++E LQ+++V++GGH +P+ AL  IS DI  G+GGYV + 
Sbjct  94   FSETNSYGQQYQAMIVRNQQNQELLQGMVVSRGGHAMPFTALSQISKDITAGFGGYVEDG  153

Query  155  ANVTGAMGSWIVPLSSFGISTSTGHVAALLTTDELSGARNESDRLYRFAVTGKPDLNRMH  214
                GAM SW +PLSS+G ST+ GH+A +L+TD+LSGAR+++DRLYRF V G+PDLN+MH
Sbjct  154  QTAVGAMRSWRIPLSSYGTSTGRGHLAVMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMH  213

Query  215  TSIDMGGNHLNNTDTVNAIT-----GSFSGN-VSAAKVTAEGDIRSQQGWLISRGDKGWL  268
            T+IDMGGN+LN+ +TV A       G+F+ + VS + +TA GDIRS  GW+++R++KGW+
Sbjct  214  TAIDMGGNNLNSVGTVTASNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWM  273

Query  269  NESYGGGFYMSDNNWVRSVNNKGIVTGGQVKGGSIRSDGRLSAGEVLQLDQINSVGSGCS  328
            +E+ GGG+YMSDN+W+R +NNKG+ TGG+++GG IRSDG +SAG +L LD+IN  +++C+
Sbjct  274  DETHGGGLYMSDNDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACP  333

Query  329  SNGLVSRDVHGALLACQSGVWGT  351
             NG +SRD  GA L+CQSG+W++
Sbjct  334  VNGAISRDTAGATLSCQSGIWSS  356

19) ECL_00424 in NC_014121


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  287 bits (1075),  Expect = 9e-79, Method: Compositional matrix adjust.
 Identities = 180/372 (49%), Positives = 265/372 (72%), Gaps = 18/372 (4%)

Query  4    TKTTDRGWAILSTGAALVILLLVSVWGYSLISDWMQRRTWMNTSAQVSRFTQAVKSYTGR  63
             +  D G   +S GA+L+I+L+++  +   ++D ++ R W   + Q +RFTQAV SY G+
Sbjct  3    KQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGK  62

Query  64   YYDTLLasatttapvivtpaMLKNTGFLEQGFSETTIDGQAYSAAVIRNATNTDQLQAMI  123
            +Y T+LASATTT+P +VT  MLKNTG+L  +FSET   GQ Y A ++RN  N + LQ+M+
Sbjct  63   FYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMV  122

Query  124  YTQNGSALPFLALRQISMDISAGMGGYIWTSGIATGAMGSWTVPLAQFGVSSTQGHIATL  183
             ++ G A+PF AL QIS DI+AG GGY+  +  A GAM SW +PL+ +G S+ +GH+A +
Sbjct  123  VSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVM  182

Query  184  LTADELGVARGESDRLYRFSVTGKPDLNTMHTSIDMggnnlnntgtvnavtgtFSGNVTA  243
            L++D+L+ AR ++DRLYRF V G+PDLN MHT+IDMG                 + N+ +
Sbjct  183  LSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMG-----------------GNNLNS  225

Query  244  GGNMTANGTVTGQNVAAGTNVTAGNTITASNDIRSNNGWFITRDGKGWLDETHGGGFYMS  303
             G +TA+  V+GQN   G ++ +   ITA+ DIRS  GW++TR GKGW+DETHGGG+YMS
Sbjct  226  VGTVTAS-NVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMS  284

Query  304  DNDWVRVVNNKNIYTAGQVRGGSVRADGRLSTGEVLQLDGVNTAGATCSPNGLVSRDASG  363
            DNDW+R++NNK +YT+G++RGG +R+DG +S+G +L LD +N A+++C+ NG +SRD++G
Sbjct  285  DNDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAG  344

Query  364  AILSCQSGVWTG  375
            A LSCQSG+W++
Sbjct  345  ATLSCQSGIWSS  356

20) Ser39006_1490 in NC_022268


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  282 bits (1054),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 185/393 (48%), Positives = 281/393 (72%), Gaps = 23/393 (5%)

Query  1    MKGKSADRGWAMMSTgigllilliVAVWSMGYYNDYIQQRGWQVTASQLSRFRASVKTYV  60
            MK +  D G   MS G GLLI+L++A  +  Y  DY++ R WQV A Q +RF  +V +YV
Sbjct  1    MKKQKHDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYV  60

Query  61   GRYYDTLLAAASttvpvivtptiLKNTGLLEAGFSNTTADGQQISAVVTRNATNTDQLQA  120
            G++Y T+LA+A+TT P +VT  +LKNTGLL A+FS+T + GQQ  A++ RN  N + LQ+
Sbjct  61   GKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQG  120

Query  121  LVITQGGASLPYTALRNISVDI-DGMGGYVWKSTNVTGAMASWSVPLASFGVSTSSGHVG  179
            +V+++GG ++P+TAL +IS DI  G GGYV  +    GAM SW +PL+S+G ST+ GH++
Sbjct  121  MVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLA  180

Query  180  ALIPSDELGVAREESDRLYRFSVTGKPDLNRMHTNIDMGSnn-----lnntntvnAQTGN  234
             ++++D+L+ ARE++DRLYRF V G+PDLN+MHT IDMG+NN        ++ V +Q GN
Sbjct  181  VMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLNSVGTVTASNVAGQNGN  240

Query  235  F------SGNVTAGGDIRSNGGWLISRGSNGWLNETHGGGFTMTDNDWVRAINNKNIYTG  288
            F      +G +TAGGDIRS GGW+++R+++GW++ETHGGG+ M+DNDW+R +NNK +YTG
Sbjct  241  FGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTG  300

Query  289  GQVRGGSVRSDSNLSGGGVLQLDQVNAAGAPCSRNGDISHDASGGILSCKDGVWVASGGE  348
            G++RGG +RSD+++S+GG+L LD++N A+++C+ NG IS+D++G+ LSC+ G+W +    
Sbjct  301  GEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIWSS----  356

Query  349  STNINIYQCPYSICDNNSASTCGGQ-LSTHSYC  380
                  Y+  ++I   N +     Q ++ H+YC
Sbjct  357  ------YRLNFNIQTFNVGKNVRNQYIGVHAYC  383

21) PAGR_g3865 in NC_017554


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  275 bits (1029),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 165/367 (45%), Positives = 262/367 (72%), Gaps = 17/367 (4%)

Query  1    MPTQKCHDQGWALLSVGAALIVLVYITTWGSSLIQDWNARQNWLRSATQASRFTQAVKSY  60
            M  QK HD G   +SVGA+L++++ +++ ++  + D    ++W   A Q++RFTQAV SY
Sbjct  1    MKKQK-HDGGFVAMSVGAGLLIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSY  59

Query  61   TGRYYDTLLSTAPVTVTPS----MLKNTGFLEQGFNENNDYGQQYLANVVRNPSQNNQLQ  116
             G++Y T+L++A  T  +     MLKNTG+L  +F+E N YGQQY A +VRN  +++ LQ
Sbjct  60   VGKFYPTVLASATTTTPAVVTTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQ  119

Query  117  ALVYTQNGNPLPFMAMDQIAVSINSGMGGYINTAGTVTGARGGWSASLQTFNANTSPGHI  176
            ++V ++ G+++PF A+ QI+  I +G GGY++ + T  GA  +W  +L ++ ++T+ GH+
Sbjct  120  GMVVSRGGHAMPFTALSQISKDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHL  179

Query  177  AALLTTDDLGASRAESDRLYRFAVNGKPDLNTMHTSIDMggndlnntgnvnaangnFSSN  236
            A +L+TDDL+++R ++DRLYRF VNG+PDLN MHT+IDMGGN+LN            S  
Sbjct  180  AVMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMHTAIDMGGNNLN------------SVG  227

Query  237  VTANGTVTGQDVNARGNMSAGSNITANGDIRSNSGWLITRDGKGWLDEAHGGGFYMSDND  296
              + + V+GQ+ N   ++ + + ITA GDIRS +GW++TR GKGW+DE+HGGG+YMSDND
Sbjct  228  TVTASNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDND  287

Query  297  WVRAVNDKSIYTGGQLQGGTVRSNGRLSTGDVLQLDGVNSPGAGCGPNGLVSRDWSGGIL  356
            W+R +N+K++YTGG+++GG +RS+G +S+G++L LD +N ++++C  NG +SRD +G+ L
Sbjct  288  WLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATL  347

Query  357  SCKDGKW  363
            SC+ G W
Sbjct  348  SCQSGIW  354

22) pilV in NC_016816


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  267 bits (998),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 157/347 (46%), Positives = 246/347 (71%), Gaps = 16/347 (4%)

Query  1    MVMLYMSVWGGSLVRDWNDRQNWLRSATQASRFTQAVKSYTGRYYDTLLSTAPVTVTP--  58
            +++L M+  ++  + D    ++W   A Q++RFTQAV SY G++Y T+L++A  T  +  
Sbjct  20   LIVLVMASLAARYMGDYLKSREWQVVAMQTNRFTQAVSSYVGKFYPTVLASATTTTPAVV  79

Query  59   --AMLKNTGFLEPGFTENNDYGQQYLATVVRNPSQNNQLQALVYTQNGSPLPFVAMDQIA  116
               MLKNTG+L ++F+E N YGQQY A +VRN  +++ LQ++V ++ G ++PF A+ QI+
Sbjct  80   TTQMLKNTGLLPASFSETNSYGQQYQAMIVRNQQNQELLQGMVVSRGGHAMPFTALSQIS  139

Query  117  VSINAGMGGYIDTAGTVTGARGGWSAPLQTFNANTTPGHIAALLTTDDLGASRAESDRLY  176
              I AG GGY++ + T  GA  +W  PL ++ ++T  GH+A +L+TDDL+++R ++DRLY
Sbjct  140  KDITAGFGGYVEDGQTAVGAMRSWRIPLSSYGTSTGRGHLAVMLSTDDLSGAREDGDRLY  199

Query  177  RFAVNGKPDLNTMHTSIDMggndlnntgnvnaangnFSSNVTANGTVTGQDVNARGNMSA  236
            RF VNG+PDLN MHT+IDMGGN+LN            S    + + V+GQ+ N   ++ +
Sbjct  200  RFQVNGRPDLNKMHTAIDMGGNNLN------------SVGTVTASNVAGQNGNFGVSLVS  247

Query  237  GNNITANGDIRSNSGWLITRDGKGWLDEAHGGGFYMSDNDWVRAVNDKSIYTGGQLQGGT  296
               ITA GDIRS +GW++TR GKGW+DE+HGGG+YMSDNDW+R +N+K++YTGG+++GG 
Sbjct  248  NGPITAGGDIRSTGGWIVTRSGKGWMDETHGGGLYMSDNDWLRILNNKGFYTGGEIRGGK  307

Query  297  VRSNGRLSTGDVLQLDGVSSPGAGCGPNGLVSRDWSGGILSCKDGKW  343
            +RS+G +S+G++L LD ++ ++++C  NG +SRD +G+ LSC+ G W
Sbjct  308  IRSDGDVSAGGILTLDKINVASTACPVNGAISRDTAGATLSCQSGIW  354

23) YpsIP31758_3727 in NC_009708


> NC_004631_P3|25|G22|29144507|NP_807849.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|24033..25340|pilV|t4250|prepilin
Length=435

 Score =  265 bits (989),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 164/323 (51%), Positives = 243/323 (76%), Gaps = 7/323 (2%)

Query  36   GDYIKQKEYQVTAVQLSRFKFALKGYVGRHYDKLLASAGTNQPVMVTTAMLKNTGFLPGG  95
            GDY+K +E QV A+Q +RF  A+ +YVG+ Y  +LASA T  P +VTT MLKNTG+LP++
Sbjct  34   GDYLKSREWQVVAMQTNRFTQAVSSYVGKFYPTVLASATTTTPAVVTTQMLKNTGLLPAS  93

Query  96   FSDTTTTGQRFQAAIVRNAMRTEQLQALIVTQGGSRLPYKALRIISADI-EGLGGYVWNN  154
            FS+T + GQ++QA IVRN    E LQ+++V++GG  +P+ AL  IS DI  G+GGYV + 
Sbjct  94   FSETNSYGQQYQAMIVRNQQNQELLQGMVVSRGGHAMPFTALSQISKDITAGFGGYVEDG  153

Query  155  ANVTGAMGSWSVPLNSFGLSTSTGHVAALLTTDELSDARNESDRLYRFAVTGKPDFNRMH  214
                GAM SW +PL+S+G ST+ GH+A +L+TD+LS+AR+++DRLYRF V G+PD+N+MH
Sbjct  154  QTAVGAMRSWRIPLSSYGTSTGRGHLAVMLSTDDLSGAREDGDRLYRFQVNGRPDLNKMH  213

Query  215  TSIDM-----ggnnlnntgtvnAIEGRFSGN-INVVDVTAEGNIRSQQGWLISRGDKGWL  268
            T+IDM      +     ++ V + +G F+ + ++   +TA G+IRS  GW+++R++KGW+
Sbjct  214  TAIDMGGNNLNSVGTVTASNVAGQNGNFGVSLVSNGPITAGGDIRSTGGWIVTRSGKGWM  273

Query  269  NESYGGGFYMSDNDWVRSVNNKGIVTGGQIKGGNIRSDGRLSVGEVLQLDQVNSAGSECG  328
            +E+ GGG+YMSDNDW+R +NNKG+ TGG+I+GG+IRSDG +S G +L LD++N A++ C 
Sbjct  274  DETHGGGLYMSDNDWLRILNNKGFYTGGEIRGGKIRSDGDVSAGGILTLDKINVASTACP  333

Query  329  SNGLVSRDASGALLSCQSGVWGT  351
             NG +SRD++GA LSCQSG+W++
Sbjct  334  VNGAISRDTAGATLSCQSGIWSS  356