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Homologs of EXB23 gene of DQ437743

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PA14_59220
( YP_792918.1 )

pyocin S5

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

0.0

2) pyoS5
( NP_249676.1 )

pyocin S5

NC_002516
(Pseudomonas aeruginosa PAO1)

0.0

• Sequence Alignments

1) PA14_59220 in NC_008463


> DQ437743|25|G23|90569640|ABD94710.1|Pseudomonas_aeruginosa_19660|-|10519..12015|-|EXB23|putative 
pyocin S5
Length=498

 Score =  737 bits (2787),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/498 (97%), Positives = 492/498 (99%), Gaps = 0/498 (0%)

Query  1    MSNDNEVPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQRDIYLQKNIYYPVRSI  60
            MSNDNE+PGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQRDIYLQKNI YPVRSI
Sbjct  1    MSNDNELPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQRDIYLQKNIHYPVRSI  60

Query  61   VEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKMESDLEGYKKTF  120
            VEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKMESDLEGYKKTF
Sbjct  61   VEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKMESDLEGYKKTF  120

Query  121  TKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEA  180
            TKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEA
Sbjct  121  TKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEA  180

Query  181  VKVLRQELNKQKALKEKEDLSQLERDYKTRKANLEMKVQSELDQAGSALPPLVSPTPEQW  240
            V+VLRQELNKQKALKEKEDLSQLE+DY+TRKANLEMKVQSELDQAGSALPPLVSPTPEQW
Sbjct  181  VNVLRQELNKQKALKEKEDLSQLEWDYRTRKANLEMKVQSELDQAGSALPPLVSPTPEQW  240

Query  241  LERATRLVTQAIADKKQLQTTNNTLIKNAPTPLEKQKAIYNGELLVDEIASLQTRLDKLN  300
            LERATRLVTQAIADKKQLQ TNNTLIKNAPTPLEKQKAIYNGELLVDEIASLQ+RLDKLN
Sbjct  241  LERATRLVTQAIADKKQLQNTNNTLIKNAPTPLEKQKAIYNGELLVDEIASLQARLDKLN  300

Query  301  aettrrrteaerkaaeeQALQDAVKFTADFYKEVTEKFGARTSEMAHQLAEGARGKNIRS  360
            AE TRRRTEAERKAAEEQALQDAVKFTADFYKEVTEKFGARTSEMA+QLAEGA+GKNIRS
Sbjct  301  AEMTRRRTEAERKAAEEQALQDAVKFTADFYKEVTEKFGARTSEMARQLAEGAKGKNIRS  360

Query  361  SAEAINSFEKHKDALNKKLSLKDRQAIAKAFDSLDKQMMAKSLEKFSKGFGVVGKAIDAA  420
            SAEAI+SFEKHKDALNKK+SLKDRQAIAKAFDSLDKQMMAKSLEKFSKGFGVVGKAIDAA
Sbjct  361  SAEAIKSFEKHKDALNKKISLKDRQAIAKAFDSLDKQMMAKSLEKFSKGFGVVGKAIDAA  420

Query  421  SLYQEFKISTETGDWKPFFVKVETLAAGAAASWLVGIAFATATATPIGILGFALVMAVTG  480
            SLYQEFK STET DWKP+FVKVETLAAGAAASWLVGIAFATATATPIGILGFALVM VTG
Sbjct  421  SLYQEFKRSTETRDWKPLFVKVETLAAGAAASWLVGIAFATATATPIGILGFALVMVVTG  480

Query  481  AMIDEGLLEKANNLVMSI  498
            AMIDE+LLEKANNLVMSI
Sbjct  481  AMIDEDLLEKANNLVMSI  498

2) pyoS5 in NC_002516


> DQ437743|25|G23|90569640|ABD94710.1|Pseudomonas_aeruginosa_19660|-|10519..12015|-|EXB23|putative 
pyocin S5
Length=498

 Score =  733 bits (2774),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 479/498 (97%), Positives = 490/498 (99%), Gaps = 0/498 (0%)

Query  1    MSNDNEVPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQREIYLQKNIYYPVRSI  60
            MSNDNE+PGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQR+IYLQKNI YPVRSI
Sbjct  1    MSNDNELPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQRDIYLQKNIHYPVRSI  60

Query  61   FEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKMESDLEGYKKTF  120
             EQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKMESDLEGYKKTF
Sbjct  61   VEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKMESDLEGYKKTF  120

Query  121  TKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEA  180
            TKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEA
Sbjct  121  TKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEA  180

Query  181  VKVLRQELNKQKALKEKEDLSQLERDYRTRKANLEMKVQSELDQAGSALPPLVSPTPEQW  240
            V+VLRQELNKQKALKEKEDLSQLE+DYRTRKANLEMKVQSELDQAGSALPPLVSPTPEQW
Sbjct  181  VNVLRQELNKQKALKEKEDLSQLEWDYRTRKANLEMKVQSELDQAGSALPPLVSPTPEQW  240

Query  241  LERATRLVTQAIADKKQLQTTNNTLIKNSPTPLEKQKAIYNGELLVDEIASLQARLVKLN  300
            LERATRLVTQAIADKKQLQ TNNTLIKN+PTPLEKQKAIYNGELLVDEIASLQARL KLN
Sbjct  241  LERATRLVTQAIADKKQLQNTNNTLIKNAPTPLEKQKAIYNGELLVDEIASLQARLDKLN  300

Query  301  aettrrrteaerkaaeeQALQDAIKFTADFYKEVTEKFGARTSEMARQLAEGARGKNIRS  360
            AE TRRRTEAERKAAEEQALQDA+KFTADFYKEVTEKFGARTSEMARQLAEGA+GKNIRS
Sbjct  301  AEMTRRRTEAERKAAEEQALQDAVKFTADFYKEVTEKFGARTSEMARQLAEGAKGKNIRS  360

Query  361  SAEAIKSFEKHKDALNKKLSLKDRQAIAKAFDSLDKQMMAKSLEKFSKGFGVVGKAIDAA  420
            SAEAIKSFEKHKDALNKK+SLKDRQAIAKAFDSLDKQMMAKSLEKFSKGFGVVGKAIDAA
Sbjct  361  SAEAIKSFEKHKDALNKKISLKDRQAIAKAFDSLDKQMMAKSLEKFSKGFGVVGKAIDAA  420

Query  421  SLYQEFKISTETGDWKPFFVKIETLAAGAAASWLVGIAFATATATPIGILGFALVMAVTG  480
            SLYQEFK STET DWKP+FVK+ETLAAGAAASWLVGIAFATATATPIGILGFALVM VTG
Sbjct  421  SLYQEFKRSTETRDWKPLFVKVETLAAGAAASWLVGIAFATATATPIGILGFALVMVVTG  480

Query  481  AMIDEDLLEKANNLVISI  498
            AMIDEDLLEKANNLV+SI
Sbjct  481  AMIDEDLLEKANNLVMSI  498