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Homologs of hrcU gene of AY597278

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HrcU
( YP_234297.1 )

type III secretion protein HrcU

NC_007005
(Pseudomonas syringae B728a)

1e-155

2) hrcU
( YP_273541.1 )

type III secretion component protein HrcU

NC_005773
(Pseudomonas syringae 1448A)

3e-153

3) hrcU
( NP_791219.1 )

type III secretion protein HrcU

NC_004578
(Pseudomonas syringae DC3000)

1e-148

4) Pmen_0049
( YP_001185555.1 )

YscU/HrpY family type III secretion protein

NC_009439
(Pseudomonas mendocina ymp)

2e-121

5) hrcU
( YP_005210966.1 )

protein HrcU

NC_016830
(Pseudomonas fluorescens F113)

1e-93

6) hrcU
( YP_003883249.1 )

type III secretion inner membrane protein

NC_014500
(Dickeya dadantii 3937)

4e-91

7) Dd1591_1882
( YP_003004211.1 )

YscU/HrpY family type III secretion protein

NC_012912
(Dickeya zeae Ech1591)

2e-87

8) PSEBR_a5379
( YP_004356889.1 )

type III secretion protein, membrane protein

NC_015379
(Pseudomonas brassicacearum NFM421)

3e-87

9) hrcU
( YP_003539971.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

4e-87

10) hrcU
( YP_003529883.1 )

type III secretion protein HrcU

NC_013961
(Erwinia amylovora CFBP1430)

4e-87

11) Dd586_1879
( YP_003333443.1 )

type III secretion protein, YscU/HrpY family

NC_013592
(Dickeya dadantii Ech586)

5e-87

12) Ser39006_2922
( YP_008523304.1 )

type III secretion protein, YscU/HrpY family

NC_022268
(Serratia sp. ATCC 39006)

2e-84

13) hrcU
( YP_005818252.1 )

HrcU

NC_017445
(Erwinia sp. Ejp617)

3e-84

14) hrcU
( YP_005804094.1 )

type III secretion protein HrcU

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-81

15) hrcU
( YP_002650077.1 )

Hrp/hrc secretion/translocation pathway protein HrcU

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-81

16) hrcU
( YP_001906460.1 )

HrcU protein

NC_010694
(Erwinia tasmaniensis Et1/99)

3e-81

17) rscU
( YP_002870383.1 )

putative type III secretion protein

NC_012660
(Pseudomonas fluorescens SBW25)

6e-78

18) H045_00205
( YP_007395613.1 )

putative type III secretion protein

NC_020209
(Pseudomonas poae RE*1-1-14)

2e-76

19) hrcU
( YP_050171.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-75

20) D781_3935
( YP_007346310.1 )

type III secretion protein, YscU/HrpY family

NC_020064
(Serratia marcescens FGI94)

2e-75

21) Marme_1068
( YP_004312179.1 )

type III secretion protein, YscU/HrpY family

NC_015276
(Marinomonas mediterranea MMB-1)

4e-75

22) PC1_2215
( YP_003017790.1 )

YscU/HrpY family type III secretion protein

NC_012917
(Pectobacterium carotovorum PC1)

1e-72

23) PCC21_022940
( YP_006646950.1 )

type III secretion protein

NC_018525
(Pectobacterium carotovorum PCC21)

2e-67

24) rscU
( YP_006322234.1 )

type III secretion protein RscU

NC_017911
(Pseudomonas fluorescens A506)

7e-66

• Sequence Alignments

1) HrcU in NC_007005


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  542 bits (2044),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 319/359 (89%), Positives = 348/359 (97%), Gaps = 0/359 (0%)

Query  1    MSEKTEKATPKQLRDAREKGQVGQSQDLGKLLVLMAVSEITLALADESVNRLEALLSLSF  60
            MSEKTEKATPKQ+RDAREKGQVGQSQDLGKLLVLMAVSE+TL+LADESVNRL+ALL+LSF
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   QGIDRSFAASVELIASEGLSVLLSFTLCSVGIAMLMRLISSWMQIGFLFAPKALKIDPNK  120
            +GIDRSF ++VE ++SEGLSVL+SFTLCSVG+AMLMRLISSW+Q+GFLFAPKALKID NK
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  INPFSHAKQMFSGQnllnlllSVLKAIAIGATLYVQVKPVLGTLVLLANSDLTTYWHALV  180
            INPFSHAKQMFSGQN+  LLLS+LKA+AI+ATLY QVKP LGTL++LANSDL TYWHALV
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  ELFRHILRVILGLLLAIAMIDFAMQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240
            ELFRHILRVILGLLLAIAM DFA+QKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AQEILNQEPSAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEEALALIAR  300
            ++EILNQEP+AAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDE+AL LIAR
Sbjct  241  SHEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIAR  300

Query  301  AKKAGIPVVQSIWLTRTLYRSKVGKYIPRPTLQAVGHIYKVVRQLDEVTDEVIQVEVEL  359
            AK+AGIPVVQSIWL+RTLYR +VGKYIPRPTLQAVGHIYKVVRQLDE+TDEVIQVEVEL
Sbjct  301  AKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDEITDEVIQVEVEL  359

2) hrcU in NC_005773


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  533 bits (2013),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 323/359 (90%), Positives = 348/359 (97%), Gaps = 0/359 (0%)

Query  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMVVSEITLGLADDSVDRLQALLALSF  60
            MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLM VSE+TLGLAD+SV+RLQALLALSF
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   KGIDRSFAASVELIASEGLSVLLSFTLCSVGMAMLMRLVSSWMQIGFLFAPKALKLDINK  120
            KGIDRSF ++VE ++SEGLSVL+SFTLCSVG+AMLMRL+SSW+Q+GFLFAPKALK+DINK
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  INPFSHAKQMFSGQNILNLLLSILKAVAIGATLYMQVKPALGALILLANSDLTTYWHALV  180
            INPFSHAKQMFSGQNI  LLLSILKAVAI+ATLY QVKPALG+LI+LANSDL TYWHALV
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  ELFRHilrvilglllvvAMVDFAMQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240
            ELFRHILRVILGLLL +AM DFA+QKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  SHEILNQEPSAAPNPVEEADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEEALALIAR  300
            SHEILNQEP+AAP+PVE+ADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDE+AL LIAR
Sbjct  241  SHEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIAR  300

Query  301  AKKAGIPVVQSIWLTRTLYRAKVGKYIPRPTLQAVGHIYKVVRQLDEITDEVIQVEVEL  359
            AK+AGIPVVQSIWL+RTLYR +VGKYIPRPTLQAVGHIYKVVRQLDEITDEVIQVEVEL
Sbjct  301  AKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDEITDEVIQVEVEL  359

3) hrcU in NC_004578


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  518 bits (1955),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 313/359 (88%), Positives = 349/359 (98%), Gaps = 0/359 (0%)

Query  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLLAVSEVTLGLANESVNRLQALLALTF  60
            MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVL+AVSEVTLGLA+ESVNRLQALLAL+F
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   KGIERPFMSAVELIASEGLSVVLSFTLCSVGLAMLMRLISSWVQIGFLFAPKALKLDIKK  120
            KGI+R+F+SAVE ++SEGLSV++SFTLCSVGLAMLMRLISSWVQ+GFLFAPKALK+DI+K
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  IDPFSHAKQMFSGQNILNLLLSILKAVAIGATLYTQVKPALGTLILLANSDLATYLHALI  180
            I+PFSHAKQMFSGQNI  LLLSILKAVAI+ATLY+QVKPALGTLI+LANSDL TY HAL+
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  ELFQHvlrvilglllvialiDFAMQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240
            ELF+H+LRVILGLLL IA+ DFA+QKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AHEILNQEPSAAPKPVEEADMLLVNPTHYAVALYYRPGETPLPMIHCKGEDEDALALIAQ  300
            +HEILNQEP+AAPKPVE+ADMLLVNPTHYAVALYYRPGETPLP+IHCKGEDEDAL LIA+
Sbjct  241  SHEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIAR  300

Query  301  AKKAGIPVVQSIWLARTLYKVNVGKYIPRPTLLAVGHIYKVVRQLEEITDEVIRIDDDM  359
            AK+AGIPVVQSIWLARTLY+V+VGKYIPRPTL AVGHIYKVVRQL+EITDEVI+++ ++
Sbjct  301  AKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDEITDEVIQVEVEL  359

4) Pmen_0049 in NC_009439


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  428 bits (1611),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 246/359 (69%), Positives = 317/359 (89%), Gaps = 0/359 (0%)

Query  1    MSEKTEKATPKQLRDAREKGQIAQSQDVSKLLILLMVSEITWSLATESVQRLQHLMALAI  60
            MSEKTEKATPKQ+RDAREKGQ++QSQD++KLL+L+ VSE+T +LA ESV+RLQ L+AL++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   NATGQPFLRIVGQLVDEAVTVLLGFLIFSVGVAMVMRLAGGWAQFGFLFAPKALKIDFNK  120
            ++ +++FL  V +L  E+++VL++F + SVG+AM+MRL ++W Q GFLFAPKALKID+NK
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  LNPFPQLKQMFSAQNLTNLLMSILKAAVIGITLYVLLWPELGTLILLANSDLDTYWQSLM  180
            +NPF++ KQMFS+QN++ LL+SILKA  I+ TLY  + P LGTLI+LANSDL TYW++L+
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  EVFRYILRCTLGLLLVLAAVDFGLQKYFHAKKLRMSKDDVKKEYKQSEGDPMVKGQRRQL  240
            E+FR ILR  LGLLL +A  DF+LQKYFHAKKLRMS +D+KKEYKQSEGDP VKG+RRQL
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AHELLNQPPSTAARPVEEADMLVVNPTHYAVALYYRPGKTPLPMIHCKGEDEDalaliar  300
            +HE+LNQ P++A++PVE+ADML+VNPTHYAVALYYRPG TPLP+IHCKGEDEDAL LIAR
Sbjct  241  SHEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIAR  300

Query  301  akkariPVVQSVWLARTLYKVNAGRHIPRPTLEAVAHIYQLVKQLDEVTDEIIQADSGL  359
            AK+A IPVVQS+WLARTLY+V+ G+ IPRPTL+AV+HIY++V+QLDE+TDE+IQ +  L
Sbjct  301  AKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDEITDEVIQVEVEL  359

5) hrcU in NC_016830


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  336 bits (1261),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 197/355 (56%), Positives = 287/355 (81%), Gaps = 1/355 (0%)

Query  6    GEKTKRATPKKIRDARNKGQVGQSQDLSSLLVLAAITEVALTQADDSMQALGDMVTFPLR  65
            +EKT +ATPK+IRDAR+KGQVGQSQDL+ LLVL A++EV+L  AD+S++ L  +++++++
Sbjct  2    SEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSFK  61

Query  66   RLDVDFVRAFEETLAHAGGVLLNFTLMTVGLAIVTRLVAGWIQFGFLFAPEALQPDPNRL  125
             +D  F+ A E+  +++ +VL++FTL +VGLA++ RL+++W+Q GFLFAP AL+ D N++
Sbjct  62   GIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINKI  121

Query  126  NPLNQAKQMFSGQALINLFMGLVKAVFIGTVIYLVTLPALGSLINLVNGDLHSYWRGLAS  185
            NP+++AKQMFSGQ +  L+++++KAV I++ +Y    PALG+LI L N+DL +YW++L  
Sbjct  122  NPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALVE  181

Query  186  LFRHIMHICLGVLLVLAILDFGLQKYFFAKRLRMSeeevrkefkemeGDPHVKMHRRSLA  245
            LFRHI+++ LG+LL +A+ DF+LQKYF AK+LRMS+E+++KE+K+ EGDPHVK HRR L+
Sbjct  182  LFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQLS  241

Query  246  RQLVDQPVNKETKPVEDADMLVVNPTHFAVALLYRPEETPLPQLIVKGVDAEARALIERA  305
            +++++Q      KPVEDADML+VNPTH+AVAL YRP ETPLP +  KG D +A  LI RA
Sbjct  242  HEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIARA  301

Query  306  KAARVPVIQCVWLARTIYREDVGGYIPRETLQAVAHIYRVLRELDDEAKGEVIEI  360
            K A +PV+Q +WLART+YR +VG YIPR TLQAV+HIY+V+R+L DE  +EVI++
Sbjct  302  KRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQL-DEITDEVIQV  355

6) hrcU in NC_014500


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  328 bits (1229),  Expect = 4e-91, Method: Compositional matrix adjust.
 Identities = 185/347 (54%), Positives = 280/347 (81%), Gaps = 1/347 (0%)

Query  1    MSEKTEKPTPKKLQDARKKGEVGQSQDVPKLLISFALLEMILALTDSGMSKLQALMQLPL  60
            MSEKTEK+TPK+++DAR KG+VGQSQD+ KLL+  A+ E+ L+L+D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   SRITDPFGHAADEIFSEALSLLTTFCLLTISVALLMRLVGGWIQYGPLFAVEALKIDFNR  120
              I  +F  A +++ SE+LS+L +F L ++++A+LMRL+++W+Q G LFA  ALKID+N+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  LNPINQIKQMFTMRKLTDMLTNILKAVTIGLVFWLVVMPQLEWLVELAYGDLTTFWKGVE  180
            +NP+++ KQMF+ ++++ +L +ILKAV+I+  +   V P L  L+ LA +DL T+W ++ 
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  NVLKSVARTTLSALLALGVLDFGLQKYYFLKQQRMSHEDIRNEFKNSEGDPHMKGHRKSV  240
            ++++ + R  L+ LLA+++ DF+LQKY+  K+ RMSHEDI++E+K+SEGDPH+KGHR+ +
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AQEILNEPASPRVKPKVEDADLLLVNPTHYAVALFYRPGKTPLPRILLKGEDDQAKALIA  300
            ++EILN+ +++  KP VEDAD+LLVNPTHYAVAL+YRPG TPLP I  KGED++A  LIA
Sbjct  241  SHEILNQEPTAAPKP-VEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIA  299

Query  301  RAHQAGVPVIRFIWLARTLYRIPEGHYIPRDTLQPVAQVYKVLRQLE  347
            RA +AG+PV++ IWLARTLYR+  G YIPR TLQ+V+++YKV+RQL+
Sbjct  300  RAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLD  346

7) Dd1591_1882 in NC_012912


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  315 bits (1182),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 181/347 (53%), Positives = 279/347 (81%), Gaps = 1/347 (0%)

Query  1    MSEKTEKPTPKKLQDARKKGEVGQSQDVPKLLISFALLEMILALTDSGMSKLQALMQLPL  60
            MSEKTEK+TPK+++DAR KG+VGQSQD+ KLL+  A+ E+ L+L+D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   SRISDPFGHAADEVFSEalallaTFCLLTISVALLMRIVGGWIQYGPLFAVEALKLDFNR  120
              I  +F  A +++ SE+L++L +F L ++++A+LMR++++W+Q G LFA  ALK+D+N+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  LNPINQIKQMFTMRKLTDMLTNLLKATTIGLVFWLVVTPQLEWLVELAYGDLTAFWKGVE  180
            +NP+++ KQMF+ ++++ +L ++LKA +I+  +   V P L  L+ LA +DL ++W ++ 
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  NVLKSVSRTTLSALLALGVFDFGLQKYYFLKQQRMSHEDIRNEYKNSEGDPHMKGHRKSV  240
            ++++ + R  L+ LLA+++ DF+LQKY+  K+ RMSHEDI++EYK+SEGDPH+KGHR+ +
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AQEILNEPASPRVKPKVEDADLLLVNPTHYAVALFYRPGKTPLPRILLKGEDDHARALIA  300
            ++EILN+ +++  KP VEDAD+LLVNPTHYAVAL+YRPG TPLP I  KGED++A  LIA
Sbjct  241  SHEILNQEPTAAPKP-VEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIA  299

Query  301  RAHQAGVPVIRFIWLARTLYRVPEGHYIPRDTLQPVAQVYKVLRQLE  347
            RA +AG+PV++ IWLARTLYRV  G YIPR TLQ+V+++YKV+RQL+
Sbjct  300  RAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLD  346

8) PSEBR_a5379 in NC_015379


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  314 bits (1179),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 198/355 (56%), Positives = 285/355 (81%), Gaps = 1/355 (0%)

Query  6    GEKTKRATPKKIRDARNKGQVGQSQDLSSLLVLAAITEVALTQADDSMQALGDMVTFPLH  65
            +EKT +ATPK+IRDAR+KGQVGQSQDL+ LLVL A++EV+L  AD+S++ L  ++++++ 
Sbjct  2    SEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSFK  61

Query  66   RLDVDFVRAFEETLAHAGGVLLNFTLMTVGLAIVTRLVAGWIQFGFLFAPEALQPDPNRL  125
             +D  F+ A E+  +++ +VL++FTL +VGLA++ RL+++W+Q GFLFAP AL+ D N++
Sbjct  62   GIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINKI  121

Query  126  NPMNQAKQMFSGQALINLFMGLVKAVFIGTVIYLVTLPALGSLINLVNGDLNSYWRGLAS  185
            NP ++AKQMFSGQ +  L+++++KAV I++ +Y    PALG+LI L N+DL +YW++L  
Sbjct  122  NPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALVE  181

Query  186  LFRHIMHIClgvllvlalldfglQKYFFAKRLRMSeeevrkefkemeGDPHVKMHRRSLA  245
            LFRHI+++ LG+LL +A+ DF+LQKYF AK+LRMS+E+++KE+K+ EGDPHVK HRR L+
Sbjct  182  LFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQLS  241

Query  246  RQLVDQPVNKETKPVEDADMLVVNPTHFAVALLYRPEETPLPQLIVKGVDAEARALIERA  305
            +++++Q      KPVEDADML+VNPTH+AVAL YRP ETPLP +  KG D +A  LI RA
Sbjct  242  HEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIARA  301

Query  306  KVARVPVIQCIWLARTIYREDVGAYIPRETLQAVAHIYRVLRELDDEAKGEVIEI  360
            K A +PV+Q IWLART+YR +VG YIPR TLQAV+HIY+V+R+L DE  +EVI++
Sbjct  302  KRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQL-DEITDEVIQV  355

9) hrcU in NC_013971


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  314 bits (1178),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 195/362 (54%), Positives = 285/362 (79%), Gaps = 6/362 (1%)

Query  1    MAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGVVETVLALDDVGMQKLQALMMLPL  60
            M+EKTEK+T+K+++DAR KGQV QSQD+ KLL+  +V E  L+L D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   ARIGQPFELALSEVVSSAIILVATF--CGLTVAIAALLRIIGGWIQYGPLFAPEALQPDF  118
              I+++F  A+ ++ S ++ ++ +F  C  +V++A L+R+I++W+Q G LFAP AL+ D+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLC--SVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  119  NRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFYLVLTPDLESLSRLAYGDLDSFWPA  178
            N++NP+++ KQMFS +++S +L SI+KAVAI + +Y  + P L +L  LA +DL ++W A
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  179  VETLLIHVSRQtlltllvltllDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRH  238
            +  L+ H+ R  L  LL +++ DF+LQKYF  K+ RMSH+DI+ E KQSEGDPH+KGHR+
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  239  ALAHELLNQPATAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDQQAKEL  298
             L+HE+LNQ +TA  +KPVE+AD+LLVNPTHYAVALYYRP  TPLP I CKGED++A +L
Sbjct  239  QLSHEILNQEPTAA-PKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  299  IARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAVAQVYRVLRQLEDQITDEVIELE  358
            IARA++A IPV++ IWLARTLYR Q G+ IPR TLQAV+++Y+V+RQL++ ITDEVI++E
Sbjct  298  IARAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDE-ITDEVIQVE  356

Query  359  AE  360
             E
Sbjct  357  VE  358

10) hrcU in NC_013961


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  314 bits (1178),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 195/362 (54%), Positives = 285/362 (79%), Gaps = 6/362 (1%)

Query  1    MAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGVVETVLALDDVGMQKLQALMMLPL  60
            M+EKTEK+T+K+++DAR KGQV QSQD+ KLL+  +V E  L+L D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   ARIGQPFELALSEVVSSAIILVATF--CGLTVAIAALLRIIGGWIQYGPLFAPEALQPDF  118
              I+++F  A+ ++ S ++ ++ +F  C  +V++A L+R+I++W+Q G LFAP AL+ D+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLC--SVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  119  NRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFYLVLTPDLESLSRLAYGDLDSFWPA  178
            N++NP+++ KQMFS +++S +L SI+KAVAI + +Y  + P L +L  LA +DL ++W A
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  179  VETLLIHVSRQtlltllvltllDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRH  238
            +  L+ H+ R  L  LL +++ DF+LQKYF  K+ RMSH+DI+ E KQSEGDPH+KGHR+
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  239  ALAHELLNQPATAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDQQAKEL  298
             L+HE+LNQ +TA  +KPVE+AD+LLVNPTHYAVALYYRP  TPLP I CKGED++A +L
Sbjct  239  QLSHEILNQEPTAA-PKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  299  IARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAVAQVYRVLRQLEDQITDEVIELE  358
            IARA++A IPV++ IWLARTLYR Q G+ IPR TLQAV+++Y+V+RQL++ ITDEVI++E
Sbjct  298  IARAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDE-ITDEVIQVE  356

Query  359  AE  360
             E
Sbjct  357  VE  358

11) Dd586_1879 in NC_013592


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  314 bits (1176),  Expect = 5e-87, Method: Compositional matrix adjust.
 Identities = 184/359 (52%), Positives = 288/359 (81%), Gaps = 3/359 (0%)

Query  1    MSEKTEKPTSKKLQDARKKGEVGQSQDVPKLLISFALLEMILALTDNGMSKLQALMQLPL  60
            MSEKTEK+T+K+++DAR KG+VGQSQD+ KLL+  A+ E+ L+L+D+++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   SRLSDPFVHAADEVFSEALSLLSTFCLLTISVALLMRIVGGWIQYGPLFAVEALKIDFNR  120
              +  +F+ A +++ SE+LS+L +F L ++++A+LMR++++W+Q G LFA  ALKID+N+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  LNPVNQIKQMFTMRKLTDMLTSILKATTIGLVFWLVVIPQLEWLVELAYGDLTAFWKGVE  180
            +NP ++ KQMF+ ++++ +L SILKA +I+  +   V P L  L+ LA +DL ++W ++ 
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  SVLKSVARttlssllalaILDFGLQKYYFLKQQRMSHEDIRNEFKNSEGDPHMKGHRKSV  240
             +++ + R  L+ LLA+A+ DF+LQKY+  K+ RMSHEDI++E+K+SEGDPH+KGHR+ +
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AQEILNEPASPRAKPNIEDADLLLVNPTHYAVALFYRPGKTPLPRILLKGEDEQAKALIA  300
            ++EILN+ +++ +KP +EDAD+LLVNPTHYAVAL+YRPG TPLP I  KGEDE+A  LIA
Sbjct  241  SHEILNQEPTAAPKP-VEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIA  299

Query  301  RAQHANVPVIRFIWLARTLYRVPEGHYIPRHTLQSVAQVYRVLRQLDNDLSQQEIIELD  359
            RA++A +PV++ IWLARTLYRV  G YIPR TLQ+V+++Y+V+RQLD+    +E+I+++
Sbjct  300  RAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDE--ITDEVIQVE  356

12) Ser39006_2922 in NC_022268


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  305 bits (1144),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 177/340 (53%), Positives = 266/340 (79%), Gaps = 1/340 (0%)

Query  1    MSEKTEKPTTKKLQDARRKGEVGQSQDVPKLLICTSLLETILALADRSMGKLQSLMQLPL  60
            MSEKTEK+T K+++DAR KG+VGQSQD+ KLL+  ++ E  L+LAD S+ +LQ+L+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   ARLSDPFGHAAEEIFSEALSLLATFCLLTISVAVLLRLVGGWLQYGPLFAPEALRIDLSR  120
              +  +F  A E++ SE+LS+L +F L ++++A+L+RL+++W+Q G LFAP AL+ID+++
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  LNPINQFKQMFSMRKLTEMLTNILKASTIGTIFYLVIIPDLESLAELSYGDLDGFWHGVA  180
            +NP+++ KQMFS ++++ +L +ILKA +I++ +Y  + P L +L  L+ +DL  +WH++ 
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  KILHHSarttltallvlsalDFGLQKYFFMKQQRMSHEDLRSEHKDSEGDPHMKGHRKSL  240
             +++H  R  L  LL ++  DF+LQKYF  K+ RMSHED++ E K+SEGDPH+KGHR+ L
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  ANEILNKPATQRPKGKVEDADLLLVNPTHYAVALFYRPGKTPLPRILCKGKDDQAKKLIT  300
            ++EILN+ +T  PK  VEDAD+LLVNPTHYAVAL+YRPG TPLP I CKG D++A  LI+
Sbjct  241  SHEILNQEPTAAPKP-VEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIA  299

Query  301  RAHQADIPVIRFVWLARTLYRIPTGNYIPRDTLQAVAQVY  340
            RA +A+IPV++ +WLARTLYR+  G+YIPR TLQAV+++Y
Sbjct  300  RAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIY  339

13) hrcU in NC_017445


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  305 bits (1142),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 195/362 (54%), Positives = 282/362 (78%), Gaps = 6/362 (1%)

Query  6    VAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGVVETVLALDDVGMQKLQALMMLPL  65
            ++EKTEK+T+K+++DAR KGQV QSQD+ KLL+  +V E  L+L D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  66   ARIGQPFelalsevvssalvlvaTF--CGLTVAIAALLRIIGGWIQYGPLFAPEALKPDF  123
              I+++F  A+ ++ S +L ++ +F  C  +V++A L+R+I++W+Q G LFAP ALK D+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLC--SVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  124  NRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFYLVLTPDLESLARLAYGDLDSFWPA  183
            N++NP+++ KQMFS +++S +L SI+KAVAI + +Y  + P L +L  LA +DL ++W A
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  184  VETLLIHVSRQtlltllvltllDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRH  243
            +  L+ H+ R  L  LL +++ DF+LQKYF  K+ RMSH+DI+ E KQSEGDPH+KGHR+
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  244  ALAHELLNQPVAAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDGEAKAL  303
             L+HE+LNQ  +A  +KPVE+AD+LLVNPTHYAVALYYRP  TPLP I CKGED +A  L
Sbjct  239  QLSHEILNQEPTAA-PKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  304  IARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAVAQVYRVLRQLEDQITDEVIELE  363
            IARA++A IPV++ IWLARTLYR Q G+ IPR TLQAV+++Y+V+RQL++ ITDEVI++E
Sbjct  298  IARAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDE-ITDEVIQVE  356

Query  364  AE  365
             E
Sbjct  357  VE  358

14) hrcU in NC_017390


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  294 bits (1102),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 190/362 (53%), Positives = 282/362 (78%), Gaps = 6/362 (1%)

Query  1    MAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGLVETVLALDDVGMQKLQALMRLPL  60
            M+EKTEK+T+K+++DAR KGQV QSQD+ KLL+  ++ E  L+L D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   ARIGQPFelalsevvssalvlvaTF--CGLTVAIAALLRIIGGWIQYGPLFAPEALKPDF  118
              I+++F  A+ ++ S +L ++ +F  C  +V++A L+R+I++W+Q G LFAP ALK D+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLC--SVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  119  NRLNPINQFKQMFSVKKLSEMFNNIVKAAAISTIFYLVLTPDLESLARLAYGDLDSFWPA  178
            N++NP+++ KQMFS +++S ++ +I+KA AI++ +Y  + P L +L  LA +DL ++W A
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  179  VEvlltrvsrqtlltllvltllDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRH  238
            +  L+ ++ R  L  LL +++ DF+LQKYF  K+ RMSH+DI+ E KQSEGDPH+KGHR+
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  239  ALAHELLNQPAAAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDGEAKAL  298
             L+HE+LNQ ++A  +KPVE+AD+LLVNPTHYAVALYYRP  TPLP I CKGED +A  L
Sbjct  239  QLSHEILNQEPTAA-PKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  299  IARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAVAQVYRVLRQLEGQINDEVIELE  358
            IARA++A IPV++ IWLARTLYR Q G+ IPR TLQAV+++Y+V+RQL+ +I DEVI++E
Sbjct  298  IARAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLD-EITDEVIQVE  356

Query  359  AE  360
             E
Sbjct  357  VE  358

15) hrcU in NC_012214


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  294 bits (1102),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 190/362 (53%), Positives = 282/362 (78%), Gaps = 6/362 (1%)

Query  1    MAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGLVETVLALDDVGMQKLQALMRLPL  60
            M+EKTEK+T+K+++DAR KGQV QSQD+ KLL+  ++ E  L+L D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   ARIGQPFelalsevvssalvlvaTF--CGLTVAIAALLRIIGGWIQYGPLFAPEALKPDF  118
              I+++F  A+ ++ S +L ++ +F  C  +V++A L+R+I++W+Q G LFAP ALK D+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLC--SVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  119  NRLNPINQFKQMFSVKKLSEMFNNIVKAAAISTIFYLVLTPDLESLARLAYGDLDSFWPA  178
            N++NP+++ KQMFS +++S ++ +I+KA AI++ +Y  + P L +L  LA +DL ++W A
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  179  VEvlltrvsrqtlltllvltllDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRH  238
            +  L+ ++ R  L  LL +++ DF+LQKYF  K+ RMSH+DI+ E KQSEGDPH+KGHR+
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  239  ALAHELLNQPAAAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDGEAKAL  298
             L+HE+LNQ ++A  +KPVE+AD+LLVNPTHYAVALYYRP  TPLP I CKGED +A  L
Sbjct  239  QLSHEILNQEPTAA-PKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  299  IARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAVAQVYRVLRQLEGQINDEVIELE  358
            IARA++A IPV++ IWLARTLYR Q G+ IPR TLQAV+++Y+V+RQL+ +I DEVI++E
Sbjct  298  IARAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLD-EITDEVIQVE  356

Query  359  AE  360
             E
Sbjct  357  VE  358

16) hrcU in NC_010694


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  294 bits (1102),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 190/362 (53%), Positives = 282/362 (78%), Gaps = 6/362 (1%)

Query  1    MAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGLVETVLALDDVGMQKLQALMRLPL  60
            M+EKTEK+T+K+++DAR KGQV QSQD+ KLL+  ++ E  L+L D ++++LQAL+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   ARIGQPFelalsevvssalvlvaTF--CGLTVAIAALLRIIGGWIQYGPLFAPEALKPDF  118
              I+++F  A+ ++ S +L ++ +F  C  +V++A L+R+I++W+Q G LFAP ALK D+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLC--SVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  119  NRLNPINQFKQMFSVKKLSEMFNNIVKAAAISTIFYLVLTPDLESLARLAYGDLDSFWPA  178
            N++NP+++ KQMFS +++S ++ +I+KA AI++ +Y  + P L +L  LA +DL ++W A
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  179  VEvlltrvsrqtlltllvltllDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRH  238
            +  L+ ++ R  L  LL +++ DF+LQKYF  K+ RMSH+DI+ E KQSEGDPH+KGHR+
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  239  ALAHELLNQPAAAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDGEAKAL  298
             L+HE+LNQ ++A  +KPVE+AD+LLVNPTHYAVALYYRP  TPLP I CKGED +A  L
Sbjct  239  QLSHEILNQEPTAA-PKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  299  IARAQQANIPVIRFIWLARTLYRSQEGQLIPRHTLQAVAQVYRVLRQLEGQINDEVIELE  358
            IARA++A IPV++ IWLARTLYR Q G+ IPR TLQAV+++Y+V+RQL+ +I DEVI++E
Sbjct  298  IARAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLD-EITDEVIQVE  356

Query  359  AE  360
             E
Sbjct  357  VE  358

17) rscU in NC_012660


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  283 bits (1061),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 178/346 (52%), Positives = 271/346 (79%), Gaps = 0/346 (0%)

Query  5    GEKKHPASAKKLRDQRKKGQVAQSQDVAKLLALTAISEIALFTAETSLQRFQQLMLLPLS  64
            +EK + A++K++RD R KGQV+QSQD++KLL L A+SE++L  A+ S++R+Q L+ L++ 
Sbjct  2    SEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSFK  61

Query  65   RLTQPFTRALEEVLFEGMTVFFSFALLMVGVAITTKLISSWMQFGLLFAPETLKLDFNRL  124
             + ++F  A+E++  EG++V++SF+L  VG+A+  +LISSW+Q G+LFAP +LK+D+N++
Sbjct  62   GIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINKI  121

Query  125  NPISQVKQMFSAQQLMNLLMSIAKACLIASILYVVIWPSLGTLINLATSDLQSYILALIA  184
            NP+S+ KQMFS+Q++  LL+SI KA  IA+ LY  + P+LGTLI LA SDL +Y  AL+ 
Sbjct  122  NPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALVE  181

Query  185  LFRhllhvclgmllvlalIDLIMVRHFFAKRMRMTQVEVVKEYKDMEGDPHVKGQRRSLA  244
            LFRH+L+V LG+LL +A+ D+ + + F AK++RM++ ++ KEYK+ EGDPHVKG+RR L+
Sbjct  182  LFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQLS  241

Query  245  YQLAQeepkvklpkleeSDMLVVNPTHFAVALYYRPGKTPLPMLVSKGTDDEARTLIRRA  304
             ++ ++EP      +E++DML+VNPTH+AVALYYRPG TPLP++  KG D++A  LI RA
Sbjct  242  HEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIARA  301

Query  305  KAADVPVIQCVWLARTLYTKKLGASIPRETLRAVALIYRTLRELDD  350
            K A++PV+Q +WLARTLY  ++G  IPR TL+AV+ IY+ +R+LD+
Sbjct  302  KRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDE  347

18) H045_00205 in NC_020209


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 180/346 (53%), Positives = 273/346 (79%), Gaps = 0/346 (0%)

Query  5    GEKKHPASAKKLRDQRKKGQVSQSQDIGKLLALTAISEIALFTAETSLQRFQQLMRLPLS  64
            +EK + A++K++RD R KGQV+QSQD+GKLL L A+SE++L  A+ S++R+Q L+ L++ 
Sbjct  2    SEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSFK  61

Query  65   SMAQPFTRALEEVLFEGLTVFFSFALLMVATAILMKLISSWMQFGLLFAPETLKLDFNRL  124
            ++ ++F  A+E++  EGL+V++SF+L  V+ A+LM+LISSW+Q G+LFAP +LK+D+N++
Sbjct  62   GIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINKI  121

Query  125  NPLKQLKQMFSAQSVMNLLMSIAKALLLGMVVYLVIRPSLGTLINLASSDLQTYILALIA  184
            NP+ + KQMFS+Q++  LL+SI KA+ ++  +Y  ++P+LGTLI LA+SDL TY  AL+ 
Sbjct  122  NPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALVE  181

Query  185  lfryllhaclalllvlalidlvlQKHFFAKRMRMTQVEVVKEYKDMEGDPHVKGKRRALA  244
            LFR +L+  L+LLL +A+ D+ LQK F AK++RM++ ++ KEYK+ EGDPHVKG RR L+
Sbjct  182  LFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQLS  241

Query  245  QELAQeepkvklpkleeSDMLVVNPTHFAVALYYRPGKTPLPVLVNKGTDDEARELIRQA  304
            +E+ ++EP      +E++DML+VNPTH+AVALYYRPG TPLP++  KG D++A +LI +A
Sbjct  242  HEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIARA  301

Query  305  KAAEVPVIQCVWLARTLYTHKLGAGIPRETLQAVALIYRTLRELDD  350
            K A +PV+Q +WLARTLY  ++G  IPR TLQAV+ IY+ +R+LD+
Sbjct  302  KRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDE  347

19) hrcU in NC_004547


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  275 bits (1028),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 182/361 (51%), Positives = 277/361 (77%), Gaps = 7/361 (1%)

Query  1    MSEKTEQPTEKKLEDARRKGEVGQSQDVPKLLICVGLLECVLALADSTMGKLQTLVQLPL  60
            MSEKTE++T K++ DAR KG+VGQSQD+ KLL+ +++ E  L+LAD ++ +LQ+L+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   QRLGTPFAQVAKEVFHDA-AVLAG-TLCLLSAAIAVLLRIAGGWLQYGPLFAPEALKLDL  118
            + ++ +F     ++  ++ +VL + TLC  S ++A+L+R+ ++W+Q G LFAP ALK+D+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLC--SVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  119  NRLNPINQFKQMFSMRKLVEMLTNILKAVVIGTVFYKvvvpelealvelaYGDLHGFWQG  178
            N++NP+++ KQMFS +++  +L +ILKAV I++ +Y  V P L +L+ LA +DL  +W++
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  179  VKalltritrttltallvlsalDFGMQKYFFLKQQRMSHEDLRNEHKDSEGDPHMKGHRK  238
            +  L+ +I R  L  LL ++  DF++QKYF  K+ RMSHED+++E K+SEGDPH+KGHR+
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  239  SLAHELANESAAPRPKPKLEDADMLLVNPTHYAVGLYYRPGKTPLPRILFKGENKAAQEL  298
             L+HE+ N+ +++ PKP +EDADMLLVNPTHYAV+LYYRPG TPLP I  KGE+  A +L
Sbjct  239  QLSHEILNQEPTAAPKP-VEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  299  IAQAKKAGIPVIRFIWLTRTLYRTTPEGHYIPRETLQAVAQVYRVLRQLEDEQKRDIIEM  358
            IA+AK+AGIPV++ IWL+RTLYR    G YIPR TLQAV+++Y+V+RQL DE   ++I++
Sbjct  298  IARAKRAGIPVVQSIWLARTLYR-VQVGKYIPRPTLQAVGHIYKVVRQL-DEITDEVIQV  355

Query  359  E  359
            E
Sbjct  356  E  356

20) D781_3935 in NC_020064


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 173/363 (48%), Positives = 283/363 (78%), Gaps = 7/363 (1%)

Query  1    MSEKTEQATPQKLQESRKKGQVGQSQDIPKLLISIGILEAIFALVEDGMQrmesmmllpl  60
            MSEKTE+ATP++++++R KGQVGQSQD+ KLL+ +++ E  ++L +++++R+++++ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   lrlrDPFGHAMEEVLSDSLLVLALFSAIVCSIAL--LLRVLGGWIQFGPLFSVEALLPKP  118
              +  +F  A+E++ S++L VL  F+  +CS++L  L+R++++W+Q G LF+  AL    
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFT--LCSVGLAMLMRLISSWVQVGFLFAPKALKIDI  118

Query  119  ESLNPVNHFKNMFSGRQMAQLLTSIIKAAAIGLVLWLSLAPEMGNLARLAQSTLDGFWHG  178
            + +NP +H K+MFSG++++ LL SI+KA AI+  L   + P +G L  LA+S L  +WH+
Sbjct  119  NKINPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHA  178

Query  179  VLQLFISCarrvllvllalSLMDFGVQRFFFLKQQRMSHEDIRNEYKQNEGDPHMKGHRR  238
            +++LF    R +L +LLA+++ DF++Q++F  K+ RMSHEDI++EYKQ+EGDPH+KGHRR
Sbjct  179  LVELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRR  238

Query  239  QVAQDILNEEPSAARNVAVEEADVLLVNPTHYAVGLYYRPGETPLPRLVFKAHGDDAHYL  298
            Q++++ILN+EP+AA + +VE+AD+LLVNPTHYAV+LYYRPGETPLP +  K++++DA  L
Sbjct  239  QLSHEILNQEPTAAPK-PVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  299  VDQAQRAHIPVVRYIWLTRTLYRTTPEGSWIPRETLKAVAQVYRLLRELEDSYLNEVIEL  358
            + +A+RA IPVV+ IWL+RTLYR    G  IPR TL+AV+++Y+++R+L++   +EVI++
Sbjct  298  IARAKRAGIPVVQSIWLARTLYR-VQVGKYIPRPTLQAVGHIYKVVRQLDEI-TDEVIQV  355

Query  359  EEE  361
            E E
Sbjct  356  EVE  358

21) Marme_1068 in NC_015276


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  274 bits (1026),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 172/349 (50%), Positives = 258/349 (74%), Gaps = 3/349 (0%)

Query  1    MSEKTEKATPKKIKDSRKKGQVGQSQDIHKlmilgvllevvlgmvDSGVRNLEKLTSIPL  60
            MSEKTEKATPK+I+D+R KGQVGQSQD+ KL++L  + EV LG+ D +V  L+ L ++++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   SMINQPFQYALQATVVNCLTIAASMVMMALGIAVLFRLLGGWLQFGFLIAPEALKIDFNR  120
              I+++F  A++    + L++  S  + ++G+A+L RL+++W+Q GFL+AP ALKID+N+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  LNPFSQLKNMFSGKKLFELFNSFIKAITIGVVMYFILTPILPSLGKLALTDLDTTWRGIA  180
            +NPFS+ K+MFSG+++  L+ S++KA++I+  +Y  + P L +L  LA +DL T W+++ 
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  ELFLKVERACVGVLIVIASIDFGMQKYFHFKSLKMSKDDVKQEYKNQEGDPHLKGQRKSE  240
            ELF  + R  +G+L+ IA  DF++QKYFH K L+MS +D+K+EYK+ EGDPH+KG+R+  
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AVRLATeepspapsakpeLGEADTLVVNPTHFAVALYYRSEETPLPKILTKGQDQDALDL  300
            +          + +A   + +AD L+VNPTH+AVALYYR+ ETPLP I  KG+D+DALDL
Sbjct  241  S---HEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDL  297

Query  301  IEQAKEKGIPVIRFIWLARTLYKEQEGHYIPRTTLRYVAKIYQVLGELD  349
            I +AK  GIPV++ IWLARTLY+ Q G YIPR TL+ V+ IY+V+ +LD
Sbjct  298  IARAKRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLD  346

22) PC1_2215 in NC_012917


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 179/359 (50%), Positives = 277/359 (78%), Gaps = 3/359 (0%)

Query  1    MSEKTEQPTDKKLEDARRKGEVGQSQDVPKLLICVGLLECVLALADSTMGKLQTLVQLPL  60
            MSEKTE++T K++ DAR KG+VGQSQD+ KLL+ +++ E  L+LAD ++ +LQ+L+ L++
Sbjct  1    MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSF  60

Query  61   QRLDAPFAQVAKEVFHDAAVLAGTlcllaaaiavllRIVGGWIQYGPLFAPEALKLDLNR  120
            + +D +F     ++  ++  +  ++ L + ++A+L+R++++W+Q G LFAP ALK+D+N+
Sbjct  61   KGIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINK  120

Query  121  LNPINQFKQMFSMRKLVEMLTNILKAVVIGTVFYKvvvpelealvelaYGDLHGFWQGVK  180
            +NP+++ KQMFS +++  +L +ILKAV I++ +Y  V P L +L+ LA +DL  +W+++ 
Sbjct  121  INPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALV  180

Query  181  alltriarttltallvlsalDFGLQKYFFLKQQRMSHEDLRNEHKDSEGDPHMKGHRKSL  240
             L+ +I R  L  LL ++  DF+LQKYF  K+ RMSHED+++E K+SEGDPH+KGHR+ L
Sbjct  181  ELFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL  240

Query  241  AHELMNEPAAPRPKAKVEDADMLLVNPTHYAVGLYYRPGKTPLPRILFKGEDSAAQELIA  300
            +HE++N+ +++ PK+ VEDADMLLVNPTHYAV+LYYRPG TPLP I  KGED  A +LIA
Sbjct  241  SHEILNQEPTAAPKP-VEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIA  299

Query  301  QAKKADIPVIRFIWLTRTLYRTTPEGQYIPRETLQAVAQVYRVLRQLEDEQKRDIIEME  359
            +AK+A+IPV++ IWL+RTLYR    G+YIPR TLQAV+++Y+V+RQL DE   ++I++E
Sbjct  300  RAKRAGIPVVQSIWLARTLYR-VQVGKYIPRPTLQAVGHIYKVVRQL-DEITDEVIQVE  356

23) PCC21_022940 in NC_018525


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  249 bits (929),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 171/347 (50%), Positives = 263/347 (76%), Gaps = 7/347 (2%)

Query  15   DARRKGEVGQSQDVPKLLICVGLLECVLALADSTMGKLQTLVQLPLQRLDAPFAQVAKEV  74
            DAR KG+VGQSQD+ KLL+ +++ E  L+LAD ++ +LQ+L+ L+++ +D +F     ++
Sbjct  15   DAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSFKGIDRSFLSAVEHL  74

Query  75   FHDA-AVLAG-TLCllaaaiavllrvvGGWLQYGPLFAPEALNLDLNRLNPINQFKQMFS  132
              ++ +VL + TLC ++ A+ + L   ++W+Q G LFAP AL++D+N++NP+++ KQMFS
Sbjct  75   TSEGLSVLISFTLCSVGLAMLMRLI--SSWVQVGFLFAPKALKIDINKINPFSHAKQMFS  132

Query  133  MRKLVEMLTNILKAVVIGTVFYKvvvpelealvelaYGDLHGFWQGVKallmrvarttlt  192
             +++  +L +ILKAV I++ +Y  V P L +L+ LA +DL  +W+++  L+ ++ R  L 
Sbjct  133  GQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALVELFRHILRVILG  192

Query  193  allvlsalDFGLQKYFFLKQQRMSHEDLRNEHKDSEGDPHMKGHRKSLAHELMNEPAAPR  252
             LL ++  DF+LQKYF  K+ RMSHED+++E K+SEGDPH+KGHR+ L+HE++N+ +++ 
Sbjct  193  LLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQLSHEILNQEPTAA  252

Query  253  PKAKVEDADMLLVNPTHYAVGLYYRPGKTPLPRILFKGEDRAAQELIAQAQKADIPVIRF  312
            PK+ VEDADMLLVNPTHYAV+LYYRPG TPLP I  KGED  A +LIA+A++A+IPV++ 
Sbjct  253  PKP-VEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIARAKRAGIPVVQS  311

Query  313  IWLTRTLYRTTPEGHYIPRETLQAVAQVYRVLRQLEDEQKRDIIEME  359
            IWL+RTLYR    G YIPR TLQAV+++Y+V+RQL DE   ++I++E
Sbjct  312  IWLARTLYR-VQVGKYIPRPTLQAVGHIYKVVRQL-DEITDEVIQVE  356

24) rscU in NC_017911


> AY597278|25|G25|51103057|AAT96203.1|Pseudomonas_viridiflava_PNA3.3a|+|22310..23389|hrcU|-|HrcU
Length=359

 Score =  244 bits (909),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 180/346 (53%), Positives = 272/346 (79%), Gaps = 0/346 (0%)

Query  5    GEKKHPASAKKLRDQRKKGQVAQSQDVSKLLALTAISEVALFTAETSLQRFQQLMVFPMS  64
            +EK + A++K++RD R KGQV+QSQD++KLL L A+SEV+L  A+ S++R+Q L+ ++  
Sbjct  2    SEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLMAVSEVTLGLADESVNRLQALLALSFK  61

Query  65   RLSQPFvrvleevlveglvMFFSFSLLMAGLAIAAKLIGSWMQFGLLFAPQTLKLDFNRL  124
             + ++F+  +E++  EGL +++SF+L   GLA+  +LI+SW+Q G+LFAP++LK+D+N++
Sbjct  62   GIDRSFLSAVEHLTSEGLSVLISFTLCSVGLAMLMRLISSWVQVGFLFAPKALKIDINKI  121

Query  125  NPISQIKQMFSAQSLMNLLMSIAKAFLLGLIVYVVVWPSLGALINLANSDLQSYllalia  184
            NP+S+ KQMFS+Q++  LL+SI KA  ++  +Y  V P+LG+LI LANSDL +Y  AL+ 
Sbjct  122  NPFSHAKQMFSGQNISTLLLSILKAVAIAATLYSQVKPALGTLIILANSDLVTYWHALVE  181

Query  185  lfrhllhaclglllvlalidltlQKHFFAKRMRMTQVEVVKEYKDMEGDPHVKGqrrqla  244
            LFRH+L+  LGLLL +A+ D++LQK F AK++RM++ ++ KEYK+ EGDPHVKG+RRQL+
Sbjct  182  LFRHILRVILGLLLAIAMADFALQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQLS  241

Query  245  qqlaqeepkvklpkleeADMLVVNPTHFAVALYYRPGKTPLPLLISKGTDDEARKLIARA  304
            +++ ++EP      +E+ADML+VNPTH+AVALYYRPG TPLPL+  KG D++A  LIARA
Sbjct  242  HEILNQEPTAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEDALDLIARA  301

Query  305  KAAEVPVIQCVWLARTIYTKKLGASIPREALQAVALIYRTLRELDD  350
            K A +PV+Q +WLART+Y  ++G  IPR +LQAV+ IY+ +R+LD+
Sbjct  302  KRAGIPVVQSIWLARTLYRVQVGKYIPRPTLQAVGHIYKVVRQLDE  347