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PAthogenisity Island DataBase (PAI DB)

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Homologs of hrpG gene of AF232004

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpG
( NP_791215.1 )

type III secretion protein HrpG

NC_004578
(Pseudomonas syringae DC3000)

7e-52

2) hrpG
( YP_273538.1 )

type III secretion component protein HrpG

NC_005773
(Pseudomonas syringae 1448A)

7e-52

3) Psyr_1199
( YP_234291.1 )

type III secretion protein HrpG

NC_007005
(Pseudomonas syringae B728a)

1e-51

4) Pmen_0024
( YP_001185531.1 )

hypothetical protein

NC_009439
(Pseudomonas mendocina ymp)

1e-29

• Sequence Alignments

1) hrpG in NC_004578


> AF232004|25|G24|3228546|AAC34755.1|Pseudomonas_syringae_pv._tomato_DC3000|-|25071..25502|hrpG|-|HrpG
Length=143

 Score =  196 bits (727),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 142/143 (99%), Positives = 143/143 (100%), Gaps = 0/143 (0%)

Query  1    MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSIELLDPYDAGDPQRlea  60
            MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSIELLDPYDAGDPQRLEA
Sbjct  1    MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSIELLDPYDAGDPQRLEA  60

Query  61   llgeggaslacacDGALAIDPQTRCVVLVSWMANPCSLGDLLDRLESLANQRAAMLSLMQ  120
            LLGEGGASLACACDGALAIDPQTRCVVLVSWMANPCSLGDLLDRLESLANQRA+MLSLMQ
Sbjct  61   LLGEGGASLACACDGALAIDPQTRCVVLVSWMANPCSLGDLLDRLESLANQRAGMLSLMQ  120

Query  121  TTIRNTTPTLSGRSILNHRQPGV  143
            TTIRNTTPTLSGRSILNHRQPGV
Sbjct  121  TTIRNTTPTLSGRSILNHRQPGV  143

2) hrpG in NC_005773


> AF232004|25|G24|3228546|AAC34755.1|Pseudomonas_syringae_pv._tomato_DC3000|-|25071..25502|hrpG|-|HrpG
Length=143

 Score =  196 bits (728),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 109/143 (77%), Positives = 133/143 (94%), Gaps = 0/143 (0%)

Query  4    MDFSEFAEVVGQWCDQRPATALDCWVDDANVRLEVVGHGIRCSIELLDPYDANDSQRIEA  63
            M+FSEF+E+VGQW  QRPA +LDCW+DDAN RL VVG+G+RCSIELLDPYDA D+QR+EA
Sbjct  1    MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSIELLDPYDAGDPQRLEA  60

Query  64   LLSHGGASLACACDGAFAIDPQTRCMVLVTWIPNPCNLADLLARLESLANQRAALLSLMQ  123
            LL++GGASLACACDGA+AIDPQTRC+VLV+W++NPC+L+DLL RLESLANQRA++LSLMQ
Sbjct  61   LLGEGGASLACACDGALAIDPQTRCVVLVSWMANPCSLGDLLDRLESLANQRAGMLSLMQ  120

Query  124  TTIGDMTPAISGRTTLNHRQPGV  146
            TTI + TP++SGR+ LNHRQPGV
Sbjct  121  TTIRNTTPTLSGRSILNHRQPGV  143

3) Psyr_1199 in NC_007005


> AF232004|25|G24|3228546|AAC34755.1|Pseudomonas_syringae_pv._tomato_DC3000|-|25071..25502|hrpG|-|HrpG
Length=143

 Score =  195 bits (724),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 111/143 (78%), Positives = 131/143 (92%), Gaps = 0/143 (0%)

Query  4    MDFSEFEEVVGLWRDQRPASPLDCWVDDANARLERVGGGVRCSIELLDPYDANDPQRIEA  63
            M+FSEF E+VG W  QRPA PLDCW+DDANARL  VG+GVRCSIELLDPYDA DPQR+EA
Sbjct  1    MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSIELLDPYDAGDPQRLEA  60

Query  64   LLSHGGASLACACDGAFAIDPQTRCMVLVSWMPGPCSLADLLNRLESLANQRAALLSLMH  123
            LL++GGASLACACDGA+AIDPQTRC+VLVSWM+ PCSL+DLL+RLESLANQRA++LSLM+
Sbjct  61   LLGEGGASLACACDGALAIDPQTRCVVLVSWMANPCSLGDLLDRLESLANQRAGMLSLMQ  120

Query  124  TTLVNSVPALAGRTTLNHRQPGV  146
            TT+ N+ P+L+GR+ LNHRQPGV
Sbjct  121  TTIRNTTPTLSGRSILNHRQPGV  143

4) Pmen_0024 in NC_009439


> AF232004|25|G24|3228546|AAC34755.1|Pseudomonas_syringae_pv._tomato_DC3000|-|25071..25502|hrpG|-|HrpG
Length=143

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 80/143 (56%), Positives = 124/143 (87%), Gaps = 2/143 (1%)

Query  1    MEFSEFSDVIAQWC-EASALPLDCWIDDANARLAEMGGGVRCSLEVLNPFEASDQQRLQA  59
            MEFSEF+++++QW  + +A+PLDCWIDDANARLA +G+GVRCS+E+L+P++A+D QRL+A
Sbjct  1    MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSIELLDPYDAGDPQRLEA  60

Query  60   VLSQggaglacacdgafaIDPDTHALVLVNWHRAPCSVDQLLASLERLANQRAALISLLH  119
            +L++GGA+LACACDGA+AIDP+T+ +VLV+W   PCS+++LL  LE LANQRA+++SL++
Sbjct  61   LLGEGGASLACACDGALAIDPQTRCVVLVSWMANPCSLGDLLDRLESLANQRAGMLSLMQ  120

Query  120  VSIREAA-LIAPQPSFNALHPGV  141
             +IR+++  ++ ++ +N  +PGV
Sbjct  121  TTIRNTTPTLSGRSILNHRQPGV  143