Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
translocon EspB |
NC_011601 (Escherichia coli E2348/69) |
6e-92 |
92 |
|
T3SS effector protein EspB |
NC_013716 (Citrobacter rodentium ICC168) |
1e-89 |
84 |
|
translocon EspB |
NC_013364 (Escherichia coli 11128) |
4e-77 |
100 |
|
translocon EspB |
NC_013353 (Escherichia coli 12009) |
2e-60 |
70 |
|
translocator EspB |
NC_013361 (Escherichia coli 11368) |
7e-60 |
70 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_013364_P1' AND ph.id_pai_orf='24' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc