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PAthogenisity Island DataBase (PAI DB)

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Homologs of SAUSA300_1404 gene of NC_007793_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAUSA300_1404
( YP_494101.1 )

phiSLT ORF 563-like protein, terminase, large subunit

NC_007793
(Staphylococcus aureus FPR3757)

0.0

100

2) SAA6159_01378
( YP_005739524.1 )

phage terminase large subunit

NC_017338
(Staphylococcus aureus JKD6159)

0.0

100

3) USA300HOU_1453
( YP_001575341.1 )

terminase large subunit

NC_010079
(Staphylococcus aureus TCH1516)

0.0

100

4) BN843_14510
( YP_007868516.1 )

Phage terminase large subunit

NC_021059
(Staphylococcus aureus M1)

0.0

5) MS7_1468
( YP_005757909.1 )

phage Terminase family protein

NC_017351
(Staphylococcus aureus 11819-97)

0.0

6) CA347_1447
( YP_008128305.1 )

phage Terminase family protein

NC_021554
(Staphylococcus aureus CA-347)

0.0

7) SACOL0367
( YP_185259.1 )

prophage L54a, terminase, large subunit

NC_002951
(Staphylococcus aureus COL)

0.0

8) SAEMRSA15_13740
( YP_006237718.1 )

terminase large subunit

NC_017763
(Staphylococcus aureus HO 5096 0412)

0.0

9) SaurJH1_1079
( YP_001316222.1 )

phage terminase

NC_009632
(Staphylococcus aureus JH1)

0.0

10) SaurJH9_1059
( YP_001246436.1 )

phage terminase

NC_009487
(Staphylococcus aureus JH9)

0.0

11) C248_0349
( YP_006709110.1 )

terminase large subunit

NC_018608
(Staphylococcus aureus 08BA02176)

0.0

12) SAS0932
( YP_043059.1 )

terminase large subunit

NC_002953
(Staphylococcus aureus MSSA476)

0.0

13) SAPIG0373
( YP_005733183.1 )

putative phage terminase, large subunit

NC_017333
(Staphylococcus aureus ST398)

0.0

14) SAPIG1518
( YP_005734314.1 )

putative phage terminase, large subunit

NC_017333
(Staphylococcus aureus ST398)

0.0

15) SAOV_0318
( YP_005735835.1 )

terminase-large subunit

NC_017337
(Staphylococcus aureus ED133)

0.0

16) SABB_00008
( YP_008168232.1 )

putative phage terminase large subunit

NC_021670
(Staphylococcus aureus Bmb9393)

0.0

17) MW1401
( NP_646218.1 )

terminase large subunit

NC_003923
(Staphylococcus aureus MW2)

0.0

18) SAOUHSC_01538
( YP_500054.1 )

phage terminase large subunit

NC_007795
(Staphylococcus aureus NCTC 8325)

0.0

19) SAAV_2032
( YP_003282888.1 )

putative phage terminase, large subunit

NC_013450
(Staphylococcus aureus ED98)

0.0

20) HMPREF0772_11690
( YP_005747772.1 )

terminase large subunit

NC_017342
(Staphylococcus aureus TCH60)

0.0

21) SAR1519
( YP_040920.1 )

terminase large subunit

NC_002952
(Staphylococcus aureus MRSA252)

0.0

22) A284_07900
( YP_007385341.1 )

terminase large subunit

NC_020164
(Staphylococcus warneri SG1)

0.0

23) GK0528
( YP_146381.1 )

phage-terminase large subunit

NC_006510
(Geobacillus kaustophilus HTA426)

9e-173

24) BTG_30025
( YP_006607431.1 )

phage-terminase large subunit

NC_018500
(Bacillus thuringiensis HD-771)

5e-170

25) BAA_4119
( YP_002868188.1 )

putative prophage LambdaBa02, terminase, large subunit

NC_012659
(Bacillus anthracis A0248)

5e-160

26) BAMEG_0535
( YP_002813146.1 )

putative prophage LambdaBa02, terminase, large subunit

NC_012581
(Bacillus anthracis CDC 684)

5e-160

27) H9401_3904
( YP_006210958.1 )

Prophage LambdaBa02, terminase, large subunit

NC_017729
(Bacillus anthracis H9401)

5e-160

28) BAS3806
( YP_030056.1 )

prophage LambdaBa02, terminase, large subunit

NC_005945
(Bacillus anthracis Sterne)

5e-160

29) BCAH187_A2237
( YP_002338190.1 )

putative prophage LambdaBa02, terminase, large subunit

NC_011658
(Bacillus cereus AH187)

7e-160

30) BCN_2050
( YP_005104583.1 )

prophage LambdaBa02, terminase, large subunit

NC_016771
(Bacillus cereus NC7401)

7e-160

31) BA_4094
( NP_846333.1 )

prophage LambdaBa02, terminase, large subunit

NC_003997
(Bacillus anthracis Ames)

1e-159

32) GBAA_4094
( YP_020739.2 )

prophage LambdaBa02, terminase, large subunit

NC_007530
(Bacillus anthracis Ames Ancestor)

1e-159

33) BLi01548
( YP_006712933.1 )

phage terminase large subunit

NC_006322
(Bacillus licheniformis DSM 13)

1e-147

34) BL00882
( YP_078731.1 )

phage related, terminase large sub-unit

NC_006270
(Bacillus licheniformis DSM 13)

1e-147

35) CEA_G1907
( YP_005671039.1 )

phage terminase-like protein large subunit

NC_017295
(Clostridium acetobutylicum EA 2018)

1e-136

36) CA_C1895
( NP_348518.1 )

phage terminase-like protein large subunit

NC_003030
(Clostridium acetobutylicum ATCC 824)

8e-137

37) ymfN
( YP_004636558.1 )

Phage terminase-like protein, large subunit

NC_015687
(Clostridium acetobutylicum DSM 1731)

8e-137

38) EHR_00650
( YP_006486015.1 )

phage terminase-like protein large subunit

NC_018081
(Enterococcus hirae ATCC 9790)

2e-133

39) MC28_3173
( YP_006829994.1 )

hypothetical protein

NC_018693
(Bacillus thuringiensis MC28)

4e-132

40) gp02
( YP_003919442.1 )

phage terminase-like protein, large subunit

NC_014551
(Bacillus amyloliquefaciens DSM 7)

9e-131

41) LL3_00908
( YP_005544679.1 )

phage terminase-like protein large subunit

NC_017190
(Bacillus amyloliquefaciens LL3)

9e-131

42) HN6_00658
( YP_005863723.1 )

Terminase large subunit

NC_017481
(Lactobacillus salivarius CECT 5713)

2e-120

43) LSL_0783
( YP_535676.1 )

terminase large subunit

NC_007929
(Lactobacillus salivarius UCC118)

3e-120

44) EFAU085_02466
( YP_008395988.1 )

Phage terminase-like protein, large subunit

NC_021994
(Enterococcus faecium AUS0085)

7e-100

45) BCAH820_4385
( YP_002453334.1 )

putative phage terminase, large subunit

NC_011773
(Bacillus cereus AH820)

6e-87

• Sequence Alignments

1) SAA6159_01378 in NC_017338


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  891 bits (3374),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 563/563 (100%), Positives = 563/563 (100%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDKGEGNIEFISIKDIMR  563
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

2) SAUSA300_1404 in NC_007793


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  891 bits (3374),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 563/563 (100%), Positives = 563/563 (100%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDKGEGNIEFISIKDIMR  563
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

3) USA300HOU_1453 in NC_010079


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  891 bits (3374),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 563/563 (100%), Positives = 563/563 (100%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDKGEGNIEFISIKDIMR  563
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

4) BN843_14510 in NC_021059


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  887 bits (3360),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 562/563 (99%), Positives = 563/563 (100%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDKGEGNIEFISIKDIMR  563
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

5) MS7_1468 in NC_017351


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  886 bits (3356),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 560/563 (99%), Positives = 562/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECDRHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KEC+RHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

6) CA347_1447 in NC_021554


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  886 bits (3355),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/563 (99%), Positives = 562/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

7) SACOL0367 in NC_002951


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  886 bits (3355),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/563 (99%), Positives = 562/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

8) SAEMRSA15_13740 in NC_017763


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  886 bits (3357),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/563 (99%), Positives = 563/563 (100%), Gaps = 0/563 (0%)

Query  4    VTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYLENGGKWVFDEELAHRP  63
            +TIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  64   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  123
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  124  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  183
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  184  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  243
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  244  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  303
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  304  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  363
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  364  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  423
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  424  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  483
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  484  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  543
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  544  MNKVVSDKGEGNIEFISIKDIMR  566
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

9) SaurJH1_1079 in NC_009632


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  886 bits (3355),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/563 (99%), Positives = 562/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

10) SaurJH9_1059 in NC_009487


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  886 bits (3355),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 561/563 (99%), Positives = 562/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

11) C248_0349 in NC_018608


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  885 bits (3351),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 560/563 (99%), Positives = 561/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATTSKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            AT SKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

12) SAS0932 in NC_002953


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  884 bits (3348),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 558/563 (99%), Positives = 562/563 (99%), Gaps = 0/563 (0%)

Query  4    VTIKILNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECDRHLRYLENGGKWVFDEELAHRP  63
            +TIK+LNEPSPKLLTTWYAEQVTQGKIKTSKYV+KEC+RHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  64   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  123
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  124  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  183
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  184  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  243
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  244  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  303
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  304  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  363
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  364  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  423
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  424  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  483
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  484  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  543
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  544  MNKVVSDSGEGNIEFISIKDIMR  566
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

13) SAPIG0373 in NC_017333


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  880 bits (3333),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 553/563 (99%), Positives = 560/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECDRHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KEC+RHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIISLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEI+SLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVL+HSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVFDWIIKMNAHYPVEKVTYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDV++WIIKMN HY VEK+TYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

14) SAPIG1518 in NC_017333


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  880 bits (3334),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 554/563 (99%), Positives = 560/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECDRHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYV+KEC+RHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSINLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVL+HSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVFDWIIKMNAHYPVEKVTYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDV++WIIKMN HY VEK+TYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

15) SAOV_0318 in NC_017337


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  878 bits (3327),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 552/563 (99%), Positives = 559/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLRENFRPLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKL  NFR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVNMVEAGRDTLDRIIEDERTFYYLASLdddddindssnWIKANPNLGVSIDLD  300
            YQLDGPLV+MVEAGRDTLD+IIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSI+LD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPDERGDFITKRFNIFANNNEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360
            EMKEEWEKAKRTP ERGDFITKRFNIFANN+EMSFIDYPTLQKNNEIVSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYREWEEDGLLTIQDN  420
            GYDLSETEDFTAACATFALDNGKVAVL+HSWIPKHKVEYSNEKIPYREWEEDGLLT+QD+
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDKGEGNIEFISIKDIMR  563
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

16) SABB_00008 in NC_021670


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  875 bits (3315),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/563 (98%), Positives = 558/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVIQGKIKTSKYVKKECERHIRYLENGGKWMFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQV QGKIKTSKYVKKECERH+RYLENGGKW+FDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLRENFRPLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKL  NFR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLdddddindssnWIKANPNLGVSIDLD  300
            YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSI+LD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNDIISLDELEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNN+I+SL+ELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYREWEEDGLLTIQDK  420
            GYDLSETEDFTAACATFALDNGKVAVL+HSWIPKHKVEYSNEKIPYREWEEDGLLT+QDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVFNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDV+NWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

17) MW1401 in NC_003923


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  875 bits (3315),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/563 (98%), Positives = 558/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLRENFRPLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKL  NFR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVNMVEAGRDTLDRIIEDERTFYYLASLdddddindssnWIKANPNLGVSIDLD  300
            YQLDGPLV+MVEAGRDTLD+IIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSI+LD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPDERGDFITKRFNIFANNDEMSFIDYPTLQKNNDIISLDELEGRPCTI  360
            EMKEEWEKAKRTP ERGDFITKRFNIFANNDEMSFIDYPTLQKNN+I+SL+ELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYIEWEEDGLLTIQDN  420
            GYDLSETEDFTAACATFALDNGKVAVL+HSWIPKHKVEYSNEKIPY EWEEDGLLT+QD+
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDKGEGNIEFISIKDIMR  563
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

18) SAOUHSC_01538 in NC_007795


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  875 bits (3313),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 548/563 (98%), Positives = 557/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLRENFRPLRDEIHYD  180
            ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKL  NFR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVNMVEAGRDTLDRIIEDERTFYYLASLdddddindssnWIKANPNLGVSIDLA  300
            YQLDGPLV+MVEAGRDTLD+IIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSI+L 
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPDERGDFITKRFNIFANNDEMSFIDYPTLQKNNDIISLDELEGRPCTI  360
            EMKEEWEKAKRTP ERGDFITKRFNIFANNDEMSFIDYPTLQKNN+I+SL+ELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYIEWEEDGLLTIQDN  420
            GYDLSETEDFTAACATFALDNGKVAVL+HSWIPKHKVEYSNEKIPY EWEEDGLLT+QD+
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDKGEGNIEFISIKDIMR  563
            MNKVVSDKGEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

19) SAAV_2032 in NC_013450


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  870 bits (3295),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 543/563 (97%), Positives = 553/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVSQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQV+QGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFREALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRF+EALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYGVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPILSREFRPLRDEIHYD  180
            ISGVANY+VSQDGENGAEIHLLANVMKQARILFDESKAMIKASP L ++FR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  KTISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
             TISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEMGRDILDGVIEDERTFYYLASLdddddindssnWIKANPNLGVSIDLE  300
            YQLDGPLVDMVE GRD LD +IEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSI+L+
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWKKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNETVSLEELEGRPCTI  360
            EMKEEW KAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNE VSLEELEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTIQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLT+QDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYVDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PY+DYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

20) HMPREF0772_11690 in NC_017342


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  870 bits (3293),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 540/563 (96%), Positives = 554/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60
            MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFREALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRF+EALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYGVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPILSREFRPLRDEIHYD  180
            ISGVANY+VSQDGENGAEIHLLANVMKQARILFDESKAMIKASP L ++FR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  KTISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
             TISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEMGRDILDGVIEDERTFYYLASLdddddmndssnWIKANPNLGVSIDLE  300
            YQLDGPLVDMVE GRD LD +IEDERTFYYLASLDDDDD+NDSSNWIKANPNLGVSI+L+
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYQTLQKNNDVIALDDLEGRPCTI  360
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDY TLQKNN++++L++LEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSDSGEGNIEFISIKDIMR  563
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

21) SAR1519 in NC_002952


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  868 bits (3287),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 538/563 (96%), Positives = 554/563 (99%), Gaps = 0/563 (0%)

Query  4    VTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  63
            +TIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  64   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFREALIFMGRKNGKTTT  123
            IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRF+EALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  124  ISGVANYGVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPILSREFRPLRDEIHYD  183
            ISGVANY+VSQDGENGAEIHLLANVMKQARILFDESKAMIKASP L ++FR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  184  KTISKIMPQASDSDKLDGLNTHIGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  243
             TISKIMPQASDSDKLDGLNTH+GIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  244  YQLDGPLVDMVEMGRDILDGVIEDERTFYYLASLdddddmndssnWIKANPNLGVSIDLE  303
            YQLDGPLVDMVE GRD LD +IEDERTFYYLASLDDDDD+NDSSNWIKANPNLGVSI+L+
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  304  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYQTLQKNNDVIALDDLEGRPCTI  363
            EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDY TLQKNN++++L++LEGRPCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  364  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  423
            GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  424  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  483
            PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  484  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  543
            DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  544  MNKVVSDSGEGNIEFISIKDIMR  566
            MNKVVSD GEGNIEFISIKDIMR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

22) A284_07900 in NC_020164


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  856 bits (3242),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 523/563 (93%), Positives = 553/563 (99%), Gaps = 0/563 (0%)

Query  1    MTIKILNEPSPKLLTTWYAQQVIDGKIIASKFVIKECERHLRYLENGGKWVFDEELAHRP  60
            MTIK+LNEPSPKLLTTWYA+QV +GKI +SK+V KECERHLRYLENGGKWVFDEELAHRP
Sbjct  1    MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRP  60

Query  61   IRFIEKFCKPSKGSKQQLVLQPWQHFIIGSLFGWVHKETRLRRFREALIFMGRKNGKTTT  120
            IRFIEKFCKPSKGSK+QLVLQPWQHFIIGSLFGWVHKET+LRRF+EALIFMGRKNGKTTT
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  121  ISGVANYGVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLSKNFRPLRDEIHYD  180
            ISGVANY+VSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKL KNFR LRDEIHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240
            ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  241  YQLDGPLVDMVEAGRDTLDGIIEDERTFYYLASLdddddmndssnWIKANPNMGVSIDIE  300
            YQLDGPLVDMVEAGRDTLD IIEDERTFYYLASLDDDDD+NDSSNWIKANPN+GVSI+++
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  301  EMKEEWEKAKRIPAERGDFITKRFNIFANNDEMSFIDYQTLQKNNEVIALDELEGQPCTI  360
            EMKEEWEKAKR PAERGDFITKRFNIFANNDEMSFIDY TLQKNNE+++L+ELEG+PCTI
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  361  GYDLSETEDFTSACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEEGFLTIQDS  420
            GYDLSETEDFT+ACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEE+G+LT+QD 
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  421  PYIEYQDVLDWIIKMNEHYPVEKITYDRANAFKLNQELKNYGFDTEETRQGALTLSPALK  480
            PYI+YQDVL+WIIKMNEHY VEKITYDRANAFKLNQELKNYGF+TEETRQGALTLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  481  DLKEMFLDGKVIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540
            DLKEMFLDGK+IFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  541  MNKVVSENGEGNIEFISIKDLMR  563
            MNKVVS++GEGNIEFISIKD+MR
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

23) GK0528 in NC_006510


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  600 bits (2266),  Expect = 9e-173, Method: Compositional matrix adjust.
 Identities = 349/563 (62%), Positives = 457/563 (82%), Gaps = 4/563 (0%)

Query  9    ILTKPSDKLLTTWYAEQVVKGKIIASKKVKLACKRHLNDLKRQGTKEFPWIFDEEKGHRP  68
            +L  PS KLLTTWYAEQV +GKI +SK VK  C RHL  L   G     W+FDEE +HRP
Sbjct  5    VLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRP  60

Query  69   IKFIETFCRPSKGNFQSLVAQAWQHFIIGSLYGWVHKDTGLRRFKEGLVFVGRKNGKSTM  128
            I+FIE FC+PSKG+ + LV Q+WQHFIIGSL+GWVHK+T LRRFKE+L+F+GRKNGK+T 
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  129  VSGLANYGCSKDGEKGADVYLLANSMKQARVIFEECQKMIWSSHLLFKHFRVLRDAIHYD  188
            +SG+ANY+ S+DGE+GA++ LLAN MKQAR++F+E + MI +S  L K+FR LRD IHYD
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  189  KTFSKIEPQASDSEKLDGLNAHLAIFDEIHEYKDYKLINVIKNSTGARRQPLILYITTAG  248
             T+SKI PQASDS+KLDGLN+H++IFDEIHE+KDYKLI+VIKNS +AR QPL++YITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  249  YQLDGPLVDYYSKAADVLDGVIEDERSFYFIAEVDEGDDIEDPKNWIKANPNIGVTLDLD  308
            YQLDGPLVD    + D LD +IEDER+FY++A +D++DDI+D+ NWIKANPN+GV+++LD
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLD  300

Query  309  TLIEEWNARKHIPAERNDFITKRLNVFVKSDEQSFLDYEVIKRNDKTIDIEKLVGMPCIG  368
             + EEW+  K+ PAER DFITKR+N+F ++DE SF+DY  +++N+  + +E L G PC  
Sbjct  301  EMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTI  360

Query  369  GFDLSQTEDFTSACLEFWLDTREIFVLSHSWIPRKKVIADNEKIPYHEWEKEGLLTICEG  428
            G+DLS+TEDFT+AC  F LD   + VLSHSWIP+ KV   NEKIPY+EWE +GLLT+ + 
Sbjct  361  GYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDK  420

Query  429  DYVEYEKVLNWFIEQSKRFCIELITYDPANAFRLVKDLENYGFKTEVVRQGAITLSPALK  488
             Y++Y+ VLNW+I  + ++ +E ITYD ANAF+L ++L NYGF TE  RQGA+TLSPALK
Sbjct  421  PYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK  480

Query  489  DVKELFLDGKVIFNNNRLFRWYINNVKLVEDRNGNWLPTKQNRYRKIDGFMAFLNAHTEV  548
            D+KE+FLDGK+IFNNN L +WYINNV+L  DRNGNWLP+KQ+RYRKIDGF AFLN+ T++
Sbjct  481  DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDI  540

Query  549  MKRMTAPKGDGNISVITMSDLLK  571
            M+++ + KG+GNI  I++ D+++
Sbjct  541  MNKVVSDKGEGNIEFISIKDIMR  563

24) BTG_30025 in NC_018500


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  591 bits (2232),  Expect = 5e-170, Method: Compositional matrix adjust.
 Identities = 348/566 (62%), Positives = 456/566 (81%), Gaps = 5/566 (0%)

Query  9    IIRILAKPSPNILATWYAEQVVKGNIIASKKVILASRRHLNDLKKQGTEEFPYIFDEDLA  68
             I++L  PSP++L+TWYAEQV +G+I +SK V     RHL  L + G      +FDE+LA
Sbjct  2    TIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELA  57

Query  69   HRPIKFIEKFCRPSKGNFKQLILQPWQHFVLGSLFGWVHKETRLRRFKEGLIFVGRKNGK  128
            HRPI+FIEKFC+PSKG+ +QL+LQPWQHF++GSLFGWVHKET+LRRFKE+LIF+GRKNGK
Sbjct  58   HRPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGK  117

Query  129  TTIISGVANYGVSKDGEKGADIPLLANSMKQARLLFDESKAMIKASPLLKKHFRTLRDAI  188
            TT ISGVANY+VS+DGE+GA+I LLAN MKQAR+LFDESKAMIKASP L K+FRTLRD I
Sbjct  118  TTTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEI  177

Query  189  HYDKTFSKIEPQASDSEKLDGLNTHIGIFDEIHEYKDYKLISVIKNSRGARDQPLLIYIT  248
            HYD T+SKI PQASDS+KLDGLNTH+GIFDEIHE+KDYKLISVIKNSR+AR QPLLIYIT
Sbjct  178  HYDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYIT  237

Query  249  TAGYQLDGPLVNYYEQGTDVLNGVFDDDRTFYFLAELDDPKEFEMPEMWVKANPNMDVSI  308
            TAGYQLDGPLV+  E G D L+ +++D+RTFY+LA LDD  +++ +  W+KANPN++VSI
Sbjct  238  TAGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSI  297

Query  309  KLSDMIEDWKKDKRTPSERNDFITKRFNMFVNNNEQSFLDYEIIKKNNKVRDINDFTGKS  368
            +L +M E+W K KRTP+ER DFITKRFN+F NN+E SF+DY  ++KNN +  ++++ G++
Sbjct  298  NLDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRP  357

Query  369  CIGGFDLSDSEDFTSACLEFPIIETGEVFVFSHSWVPEKKVLMDNEKIPYREYERMGLLT  428
            C  G+DLS++EDFT+AC  F+ ++ G V V+SHSW+P  KV   NEKIPYRE E  GLLT
Sbjct  358  CTIGYDLSETEDFTAACATFA-LDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLT  416

Query  429  IVKGEYVKKEDVFDWFVEQSKLYNIELITYDPAKAYGLVVSLQKHGFETVVVRQGYLTLG  488
            +    Y+  +DV++W++  +  Y +E ITYD A+A+ L   L++ GFET   RQG LTL+
Sbjct  417  VQDKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLS  476

Query  489  QAVDDVKERFIDGNVIFNKNRLFRWYVNNVKMIEDRNRNKLPQKQGRYRKIDGFAAFLNA  548
             A+ D+KE F+DG++IFN+N L +WY+NNV++  DRN N LP KQ+RYRKIDGFAAFLN+
Sbjct  477  PALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNT  536

Query  549  HTEVMKKFVDVQGNADIGVVSMKDLL  574
             T++M+K V  +G+++I  +S+KD++
Sbjct  537  YTDIMNKVVSDKGEGNIEFISIKDIM  562

25) BAA_4119 in NC_012659


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  558 bits (2105),  Expect = 5e-160, Method: Compositional matrix adjust.
 Identities = 324/565 (58%), Positives = 444/565 (79%), Gaps = 4/565 (0%)

Query  26   FNILIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAH  85
            +++L +PSP L TTWYA QV +G+I +SK     C+RHL  L   G     W+FDEE AH
Sbjct  3    IKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAH  58

Query  86   RPIRYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKT  145
            RPIR+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKT
Sbjct  59   RPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKT  118

Query  146  TMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIF  205
            T ISG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I 
Sbjct  119  TTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIH  178

Query  206  HDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITT  265
             D T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITT
Sbjct  179  YDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITT  238

Query  266  AGYQLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLD  325
            AGYQL+GPLV+  E + D L+ +I+++R FY++A +D  D+I+++  WIKANPN+GVS++
Sbjct  239  AGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  326  LPSLIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKEC  385
            L  + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+E++ +  L G+ C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  386  VAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTII  445
              GYDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  E G LT+ 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  446  PGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPA  505
               Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPA
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  506  LKDVKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHT  565
            LKD+KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  566  EVIPMLSQLQGDGNIEFISVNDLFK  590
            +++  +   +G+GNIEFIS++D+ +
Sbjct  539  DIMNKVVSDKGEGNIEFISIKDIMR  563

26) BAMEG_0535 in NC_012581


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  558 bits (2105),  Expect = 5e-160, Method: Compositional matrix adjust.
 Identities = 324/565 (58%), Positives = 444/565 (79%), Gaps = 4/565 (0%)

Query  26   FNILIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAH  85
            +++L +PSP L TTWYA QV +G+I +SK     C+RHL  L   G     W+FDEE AH
Sbjct  3    IKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAH  58

Query  86   RPIRYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKT  145
            RPIR+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKT
Sbjct  59   RPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKT  118

Query  146  TMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIF  205
            T ISG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I 
Sbjct  119  TTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIH  178

Query  206  HDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITT  265
             D T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITT
Sbjct  179  YDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITT  238

Query  266  AGYQLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLD  325
            AGYQL+GPLV+  E + D L+ +I+++R FY++A +D  D+I+++  WIKANPN+GVS++
Sbjct  239  AGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  326  LPSLIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKEC  385
            L  + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+E++ +  L G+ C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  386  VAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTII  445
              GYDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  E G LT+ 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  446  PGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPA  505
               Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPA
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  506  LKDVKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHT  565
            LKD+KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  566  EVIPMLSQLQGDGNIEFISVNDLFK  590
            +++  +   +G+GNIEFIS++D+ +
Sbjct  539  DIMNKVVSDKGEGNIEFISIKDIMR  563

27) H9401_3904 in NC_017729


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  558 bits (2105),  Expect = 5e-160, Method: Compositional matrix adjust.
 Identities = 324/565 (58%), Positives = 444/565 (79%), Gaps = 4/565 (0%)

Query  26   FNILIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAH  85
            +++L +PSP L TTWYA QV +G+I +SK     C+RHL  L   G     W+FDEE AH
Sbjct  3    IKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAH  58

Query  86   RPIRYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKT  145
            RPIR+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKT
Sbjct  59   RPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKT  118

Query  146  TMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIF  205
            T ISG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I 
Sbjct  119  TTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIH  178

Query  206  HDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITT  265
             D T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITT
Sbjct  179  YDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITT  238

Query  266  AGYQLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLD  325
            AGYQL+GPLV+  E + D L+ +I+++R FY++A +D  D+I+++  WIKANPN+GVS++
Sbjct  239  AGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  326  LPSLIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKEC  385
            L  + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+E++ +  L G+ C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  386  VAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTII  445
              GYDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  E G LT+ 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  446  PGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPA  505
               Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPA
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  506  LKDVKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHT  565
            LKD+KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  566  EVIPMLSQLQGDGNIEFISVNDLFK  590
            +++  +   +G+GNIEFIS++D+ +
Sbjct  539  DIMNKVVSDKGEGNIEFISIKDIMR  563

28) BAS3806 in NC_005945


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  558 bits (2105),  Expect = 5e-160, Method: Compositional matrix adjust.
 Identities = 324/565 (58%), Positives = 444/565 (79%), Gaps = 4/565 (0%)

Query  26   FNILIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAH  85
            +++L +PSP L TTWYA QV +G+I +SK     C+RHL  L   G     W+FDEE AH
Sbjct  3    IKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAH  58

Query  86   RPIRYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKT  145
            RPIR+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKT
Sbjct  59   RPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKT  118

Query  146  TMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIF  205
            T ISG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I 
Sbjct  119  TTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIH  178

Query  206  HDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITT  265
             D T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITT
Sbjct  179  YDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITT  238

Query  266  AGYQLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLD  325
            AGYQL+GPLV+  E + D L+ +I+++R FY++A +D  D+I+++  WIKANPN+GVS++
Sbjct  239  AGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  326  LPSLIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKEC  385
            L  + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+E++ +  L G+ C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  386  VAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTII  445
              GYDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  E G LT+ 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  446  PGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPA  505
               Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPA
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  506  LKDVKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHT  565
            LKD+KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  566  EVIPMLSQLQGDGNIEFISVNDLFK  590
            +++  +   +G+GNIEFIS++D+ +
Sbjct  539  DIMNKVVSDKGEGNIEFISIKDIMR  563

29) BCAH187_A2237 in NC_011658


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  557 bits (2103),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 323/565 (58%), Positives = 445/565 (79%), Gaps = 4/565 (0%)

Query  27   FNILIDPSPELRTTWYAEQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAH  86
            +++L +PSP L TTWYAEQV +G+I +SK     C+RHL  L   G     W+FDEE AH
Sbjct  3    IKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAH  58

Query  87   RPIRYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKT  146
            RPIR+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKT
Sbjct  59   RPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKT  118

Query  147  TMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIF  206
            T ISG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I 
Sbjct  119  TTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIH  178

Query  207  HDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITT  266
             D T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITT
Sbjct  179  YDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITT  238

Query  267  AGYQLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDNVDEIENPELWIKANPNMGVSLD  326
            AGYQL+GPLV+  E + D L+ +I+++R FY++A +D+ D+I+++  WIKANPN+GVS++
Sbjct  239  AGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  327  LPSLIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEGVIDIKGLTGKEC  386
            L  + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+ ++ +  L G+ C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  387  VAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKDKGWLTII  446
              GYDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  + G LT+ 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  447  PGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPA  506
               Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPA
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  507  LKDVKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHT  566
            LKD+KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  567  EVIPMLSQLQGDGNIEFISVNDLFK  591
            +++  +   +G+GNIEFIS++D+ +
Sbjct  539  DIMNKVVSDKGEGNIEFISIKDIMR  563

30) BCN_2050 in NC_016771


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  557 bits (2103),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 323/565 (58%), Positives = 445/565 (79%), Gaps = 4/565 (0%)

Query  27   FNILIDPSPELRTTWYAEQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAH  86
            +++L +PSP L TTWYAEQV +G+I +SK     C+RHL  L   G     W+FDEE AH
Sbjct  3    IKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAH  58

Query  87   RPIRYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKT  146
            RPIR+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKT
Sbjct  59   RPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKT  118

Query  147  TMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIF  206
            T ISG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I 
Sbjct  119  TTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIH  178

Query  207  HDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITT  266
             D T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITT
Sbjct  179  YDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITT  238

Query  267  AGYQLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDNVDEIENPELWIKANPNMGVSLD  326
            AGYQL+GPLV+  E + D L+ +I+++R FY++A +D+ D+I+++  WIKANPN+GVS++
Sbjct  239  AGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  327  LPSLIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEGVIDIKGLTGKEC  386
            L  + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+ ++ +  L G+ C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  387  VAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKDKGWLTII  446
              GYDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  + G LT+ 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  447  PGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPA  506
               Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPA
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  507  LKDVKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHT  566
            LKD+KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  567  EVIPMLSQLQGDGNIEFISVNDLFK  591
            +++  +   +G+GNIEFIS++D+ +
Sbjct  539  DIMNKVVSDKGEGNIEFISIKDIMR  563

31) GBAA_4094 in NC_007530


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  556 bits (2099),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 323/562 (58%), Positives = 441/562 (79%), Gaps = 4/562 (0%)

Query  1    MIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAHRPI  60
            + +PSP L TTWYA QV +G+I +SK     C+RHL  L   G     W+FDEE AHRPI
Sbjct  6    LNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRPI  61

Query  61   RYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKTTMI  120
            R+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKTT I
Sbjct  62   RFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTI  121

Query  121  SGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIFHDK  180
            SG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I  D 
Sbjct  122  SGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDA  181

Query  181  THSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITTAGY  240
            T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITTAGY
Sbjct  182  TISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGY  241

Query  241  QLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLDLPS  300
            QL+GPLV+  E + D L+ +I+++R FY++A +D  D+I+++  WIKANPN+GVS++L  
Sbjct  242  QLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDE  301

Query  301  LIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKECVAG  360
            + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+E++ +  L G+ C  G
Sbjct  302  MKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIG  361

Query  361  YDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTIIPGE  420
            YDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  E G LT+    
Sbjct  362  YDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKP  421

Query  421  YVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPALKD  480
            Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPALKD
Sbjct  422  YIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALKD  481

Query  481  VKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHTEVI  540
            +KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T+++
Sbjct  482  LKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIM  541

Query  541  PMLSQLQGDGNIEFISVNDLFK  562
              +   +G+GNIEFIS++D+ +
Sbjct  542  NKVVSDKGEGNIEFISIKDIMR  563

32) BA_4094 in NC_003997


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  556 bits (2099),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 323/562 (58%), Positives = 441/562 (79%), Gaps = 4/562 (0%)

Query  1    MIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAHRPI  60
            + +PSP L TTWYA QV +G+I +SK     C+RHL  L   G     W+FDEE AHRPI
Sbjct  6    LNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRPI  61

Query  61   RYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKTTMI  120
            R+IEKFC+PSKG  ++LVLQPWQHF+IGSL+GW+HK+T  RRF+E+LIF+GRKNGKTT I
Sbjct  62   RFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTI  121

Query  121  SGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIFHDK  180
            SG++NYAV++D E GA + +LAN  +QA  LFDES+AM++ SP L K++R  +  I  D 
Sbjct  122  SGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDA  181

Query  181  THSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITTAGY  240
            T SKI P+ASDS KLDGLNTH+GIFDEIHEFK++KLI+VIK+SR+AR QP+++YITTAGY
Sbjct  182  TISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGY  241

Query  241  QLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLDLPS  300
            QL+GPLV+  E + D L+ +I+++R FY++A +D  D+I+++  WIKANPN+GVS++L  
Sbjct  242  QLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDE  301

Query  301  LIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKECVAG  360
            + ++W+  K+T AE+ D ITK+FNIF +NDEMSF++   L++N+E++ +  L G+ C  G
Sbjct  302  MKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIG  361

Query  361  YDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTIIPGE  420
            YDLS TEDFT+AC  F+LD+G+V VLSHSW+P+ KV+  NE+I+++E  E G LT+    
Sbjct  362  YDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKP  421

Query  421  YVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPALKD  480
            Y+ Y+ V +W++  +EHY + KITYD ANA++LN++LK YGF TE  RQG LTLSPALKD
Sbjct  422  YIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALKD  481

Query  481  VKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHTEVI  540
            +KE++LDGKII N+N L +WY+NNV+L  DRNGN LPSKQS+YRKIDGFAAFLN+ T+++
Sbjct  482  LKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIM  541

Query  541  PMLSQLQGDGNIEFISVNDLFK  562
              +   +G+GNIEFIS++D+ +
Sbjct  542  NKVVSDKGEGNIEFISIKDIMR  563

33) BL00882 in NC_006270


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  517 bits (1949),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 306/560 (55%), Positives = 421/560 (76%), Gaps = 4/560 (0%)

Query  32   EKPAEKLLTTWYAEKVVSGEIIASKKNILACKRHLRDLKRAGTDEFPYVFNEEKGHRPIQ  91
            + P+ KLLTTWYAE+V  G I +SK     C RHLR L  +G      VF+EE +HRPI+
Sbjct  7    NEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRPIR  62

Query  92   FIEKFCKPSQGQYNSLTLQPWQHFVIGSLYGWVHRDTGLRRFREGLVFVARKNGKTTKIS  151
            FIEKFCKPS+G    L LQPWQHF+IGSL+GWVH++T LRRF+E+L+F++RKNGKTT IS
Sbjct  63   FIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTIS  122

Query  152  GLANFAITKDDEPGARAYVLANSKQQAGVLFEESRAMVQKSPVLRKRLRENQKGIYHDAS  211
            G+AN+A+++D+E GA   +LAN  +QA +LF+ES+AM++ SP L K +R  +  I  DA+
Sbjct  123  GVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDAT  182

Query  212  MSQIEARASDSEKLDGLNTHLGIFDEIHEFKDSKLISVIKNSRAARRQPLIIYITTAGYQ  271
            +S+I ++ASDS+KLDGLNTH+GIFDEIHEFKD KLISVIKNSRAAR QPL+IYITTAGYQ
Sbjct  183  ISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGYQ  242

Query  272  LDGPLVEYYEIASDVLDGSNVQERNFYFMAELDDISEVENPEMWIKANPNIGVTMDIPSM  331
            LDGPLV+  E + D LD    +ER FY++A LDD  +++++  WIKANPN+GV++++  M
Sbjct  243  LDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEM  302

Query  332  IQDFNADRHVPREYNDWLVKRFNIFVDNGEESFIDFEVIKSNNGHVDPESLRGMRCIGGF  391
             ++ +  ++ P E  D + KRFNIF +N+E SFID+  ++ NN  V  E L G  C  G+
Sbjct  303  KEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIGY  362

Query  392  DLSQTEDFTSACLEFLLPDNRVFVMSHSWVPAAKVQKDNEKIDYRGFEADGFLTIIPGNY  451
            DLS+TEDFT+AC  F L + +V V+SHSW+P  KV+  NEKI YR  E DG+LT+    Y
Sbjct  363  DLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKPY  422

Query  452  VQYEYVYDWFVEMSRKYQIDKITFDPANAMRLVHDLQNYGFQTEVVRQGYITLSDPLKHI  511
            ++Y+ V +W++ M+  Y ++KIT+D ANA +L ++L+NYGF+TE  RQG +TLS +LK++
Sbjct  423  IDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALKDL  482

Query  512  KELLLDGNVVYNENKLFTWYLNNVKLVEDRNGNWLPTKQTRYRKIDGFAAFLNAHTQVYL  571
            KE++LDG++++N+N L  WY+NNV+L  DRNGNWLP+KQ+RYRKIDGFAAFLN+ T++  
Sbjct  483  KEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMN  542

Query  572  DMTKPVEGGSVGFISISDLL  591
             +      G++ FISI D++
Sbjct  543  KVVSDKGEGNIEFISIKDIM  562

34) BLi01548 in NC_006322


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  517 bits (1949),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 306/560 (55%), Positives = 421/560 (76%), Gaps = 4/560 (0%)

Query  32   EKPAEKLLTTWYAEKVVSGEIIASKKNILACKRHLRDLKRAGTDEFPYVFNEEKGHRPIQ  91
            + P+ KLLTTWYAE+V  G I +SK     C RHLR L  +G      VF+EE +HRPI+
Sbjct  7    NEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRPIR  62

Query  92   FIEKFCKPSQGQYNSLTLQPWQHFVIGSLYGWVHRDTGLRRFREGLVFVARKNGKTTKIS  151
            FIEKFCKPS+G    L LQPWQHF+IGSL+GWVH++T LRRF+E+L+F++RKNGKTT IS
Sbjct  63   FIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTIS  122

Query  152  GLANFAITKDDEPGARAYVLANSKQQAGVLFEESRAMVQKSPVLRKRLRENQKGIYHDAS  211
            G+AN+A+++D+E GA   +LAN  +QA +LF+ES+AM++ SP L K +R  +  I  DA+
Sbjct  123  GVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDAT  182

Query  212  MSQIEARASDSEKLDGLNTHLGIFDEIHEFKDSKLISVIKNSRAARRQPLIIYITTAGYQ  271
            +S+I ++ASDS+KLDGLNTH+GIFDEIHEFKD KLISVIKNSRAAR QPL+IYITTAGYQ
Sbjct  183  ISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGYQ  242

Query  272  LDGPLVEYYEIASDVLDGSNVQERNFYFMAELDDISEVENPEMWIKANPNIGVTMDIPSM  331
            LDGPLV+  E + D LD    +ER FY++A LDD  +++++  WIKANPN+GV++++  M
Sbjct  243  LDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEM  302

Query  332  IQDFNADRHVPREYNDWLVKRFNIFVDNGEESFIDFEVIKSNNGHVDPESLRGMRCIGGF  391
             ++ +  ++ P E  D + KRFNIF +N+E SFID+  ++ NN  V  E L G  C  G+
Sbjct  303  KEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIGY  362

Query  392  DLSQTEDFTSACLEFLLPDNRVFVMSHSWVPAAKVQKDNEKIDYRGFEADGFLTIIPGNY  451
            DLS+TEDFT+AC  F L + +V V+SHSW+P  KV+  NEKI YR  E DG+LT+    Y
Sbjct  363  DLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKPY  422

Query  452  VQYEYVYDWFVEMSRKYQIDKITFDPANAMRLVHDLQNYGFQTEVVRQGYITLSDPLKHI  511
            ++Y+ V +W++ M+  Y ++KIT+D ANA +L ++L+NYGF+TE  RQG +TLS +LK++
Sbjct  423  IDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALKDL  482

Query  512  KELLLDGNVVYNENKLFTWYLNNVKLVEDRNGNWLPTKQTRYRKIDGFAAFLNAHTQVYL  571
            KE++LDG++++N+N L  WY+NNV+L  DRNGNWLP+KQ+RYRKIDGFAAFLN+ T++  
Sbjct  483  KEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMN  542

Query  572  DMTKPVEGGSVGFISISDLL  591
             +      G++ FISI D++
Sbjct  543  KVVSDKGEGNIEFISIKDIM  562

35) CEA_G1907 in NC_017295


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  480 bits (1810),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 297/562 (53%), Positives = 420/562 (75%), Gaps = 8/562 (1%)

Query  30   ILEEPYPELLTTWYAERLVDRTIPASKENILAAKRHLKDLERQGTDDFPWVFDEEKGHRP  89
            +L+EP P LLTTWYAE++ +  I +SK       RHL+ LE  G     WVFDEE +HRP
Sbjct  5    VLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRP  60

Query  90   IRFIEQKCKPSKGDFDQLVLQPWQHFIIGSLYGWVHKDTGIRRFREGLIFVGRKNGKTTL  149
            IRFIE+ CKPSKG   QLVLQPWQHFIIGSL+GWVHK+T +RRF+E+LIF+GRKNGKTT 
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  150  ISGLSNYSVGFDYENGARVYVLANAEQQAHELFDEAKAMVKTSPFLKKRYKPLRSIIRYE  209
            ISG++NY+V+ D ENGA + +LAN  +QA+ LFDE+KAM+K+SP L K ++ LR  I+Y+
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  210  DKFSQIEARASDSKRLDGLNTHLGIFDEIHEFQDFKLINVIKKSRGARKQPLIIYITTAG  269
              +S+I ++ASDS +LDGLNTH+GIFDEIHEF+D+KLI+VIK+SR+AR QPL+IYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  270  YVLDGPLMQFYDDGKECLENIDDNIDERTFYYMAKLDSIEEAEEPRNWIKANPNIGL-MD  328
            Y LDGPL++  + G++ L++I +  DERTFYY+A LD  ++ +++ NWIKANPN+G+ ++
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIE--DERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  329  FVGLVSDWKKDRKSPQERADWITKQFNIFADVTELSLVDIETINKNSKTIDIDTLKGLEC  388
            +  +  +W K +++P ER+D ITK+FNIFA+  E+S++D  T++KN+  + ++ L G  C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  389  TGGYDLSETEDFTSAVLEFPLPTSEVFVLCHSWISKARYNRDKNKQRLDEWIKAGDLTVI  448
            T GYDLSETEDFT+A   F+L  + V VL HSWI+K + +  ++K    EW   G LTV 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  449  PGMYVKDIYVQEWFVEQRKKYKITKIMYDPAKALRLNEALKDLGFKTEIVRQGFITLGGP  508
               Y+    V +W++     Y + KI YD A+A++LN+ LK+ GF TE  RQG +TL+ +
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  509  LQDFKQMLLDGKVIYNNSKIYRWYLKNVKLVEDRNKNWIPTKQSKNRKIDGFAATLDAHV  568
            L+D+K+M+LDGK+I+NN+ + +WY++NV+L  DRN NW+P+KQS+ RKIDGFAA L++  
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  569  DIVTKLARIKKGPASVGFASLR  590
            DI+ K+    KG +++ F S++
Sbjct  539  DIMNKVVS-DKGEGNIEFISIK  559

36) CA_C1895 in NC_003030


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  480 bits (1811),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 297/562 (53%), Positives = 420/562 (75%), Gaps = 8/562 (1%)

Query  35   ILEEPYPELLTTWYAERLVDRTIPASKENILAAKRHLKDLERQGTDDFPWVFDEEKGHRP  94
            +L+EP P LLTTWYAE++ +  I +SK       RHL+ LE  G     WVFDEE +HRP
Sbjct  5    VLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRP  60

Query  95   IRFIEQKCKPSKGDFDQLVLQPWQHFIIGSLYGWVHKDTGIRRFREGLIFVGRKNGKTTL  154
            IRFIE+ CKPSKG   QLVLQPWQHFIIGSL+GWVHK+T +RRF+E+LIF+GRKNGKTT 
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  155  ISGLSNYSVGFDYENGARVYVLANAEQQAHELFDEAKAMVKTSPFLKKRYKPLRSIIRYE  214
            ISG++NY+V+ D ENGA + +LAN  +QA+ LFDE+KAM+K+SP L K ++ LR  I+Y+
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  215  DKFSQIEARASDSKRLDGLNTHLGIFDEIHEFQDFKLINVIKKSRGARKQPLIIYITTAG  274
              +S+I ++ASDS +LDGLNTH+GIFDEIHEF+D+KLI+VIK+SR+AR QPL+IYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  275  YVLDGPLMQFYDDGKECLENIDDNIDERTFYYMAKLDSIEEAEEPRNWIKANPNIGL-MD  333
            Y LDGPL++  + G++ L++I +  DERTFYY+A LD  ++ +++ NWIKANPN+G+ ++
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIE--DERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  334  FVGLVSDWKKDRKSPQERADWITKQFNIFADVTELSLVDIETINKNSKTIDIDTLKGLEC  393
            +  +  +W K +++P ER+D ITK+FNIFA+  E+S++D  T++KN+  + ++ L G  C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  394  TGGYDLSETEDFTSAVLEFPLPTSEVFVLCHSWISKARYNRDKNKQRLDEWIKAGDLTVI  453
            T GYDLSETEDFT+A   F+L  + V VL HSWI+K + +  ++K    EW   G LTV 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  454  PGMYVKDIYVQEWFVEQRKKYKITKIMYDPAKALRLNEALKDLGFKTEIVRQGFITLGGP  513
               Y+    V +W++     Y + KI YD A+A++LN+ LK+ GF TE  RQG +TL+ +
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  514  LQDFKQMLLDGKVIYNNSKIYRWYLKNVKLVEDRNKNWIPTKQSKNRKIDGFAATLDAHV  573
            L+D+K+M+LDGK+I+NN+ + +WY++NV+L  DRN NW+P+KQS+ RKIDGFAA L++  
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  574  DIVTKLARIKKGPASVGFASLR  595
            DI+ K+    KG +++ F S++
Sbjct  539  DIMNKVVS-DKGEGNIEFISIK  559

37) ymfN in NC_015687


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  480 bits (1811),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 297/562 (53%), Positives = 420/562 (75%), Gaps = 8/562 (1%)

Query  35   ILEEPYPELLTTWYAERLVDRTIPASKENILAAKRHLKDLERQGTDDFPWVFDEEKGHRP  94
            +L+EP P LLTTWYAE++ +  I +SK       RHL+ LE  G     WVFDEE +HRP
Sbjct  5    VLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRP  60

Query  95   IRFIEQKCKPSKGDFDQLVLQPWQHFIIGSLYGWVHKDTGIRRFREGLIFVGRKNGKTTL  154
            IRFIE+ CKPSKG   QLVLQPWQHFIIGSL+GWVHK+T +RRF+E+LIF+GRKNGKTT 
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  155  ISGLSNYSVGFDYENGARVYVLANAEQQAHELFDEAKAMVKTSPFLKKRYKPLRSIIRYE  214
            ISG++NY+V+ D ENGA + +LAN  +QA+ LFDE+KAM+K+SP L K ++ LR  I+Y+
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  215  DKFSQIEARASDSKRLDGLNTHLGIFDEIHEFQDFKLINVIKKSRGARKQPLIIYITTAG  274
              +S+I ++ASDS +LDGLNTH+GIFDEIHEF+D+KLI+VIK+SR+AR QPL+IYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  275  YVLDGPLMQFYDDGKECLENIDDNIDERTFYYMAKLDSIEEAEEPRNWIKANPNIGL-MD  333
            Y LDGPL++  + G++ L++I +  DERTFYY+A LD  ++ +++ NWIKANPN+G+ ++
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIE--DERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  334  FVGLVSDWKKDRKSPQERADWITKQFNIFADVTELSLVDIETINKNSKTIDIDTLKGLEC  393
            +  +  +W K +++P ER+D ITK+FNIFA+  E+S++D  T++KN+  + ++ L G  C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  394  TGGYDLSETEDFTSAVLEFPLPTSEVFVLCHSWISKARYNRDKNKQRLDEWIKAGDLTVI  453
            T GYDLSETEDFT+A   F+L  + V VL HSWI+K + +  ++K    EW   G LTV 
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQ  418

Query  454  PGMYVKDIYVQEWFVEQRKKYKITKIMYDPAKALRLNEALKDLGFKTEIVRQGFITLGGP  513
               Y+    V +W++     Y + KI YD A+A++LN+ LK+ GF TE  RQG +TL+ +
Sbjct  419  DKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPA  478

Query  514  LQDFKQMLLDGKVIYNNSKIYRWYLKNVKLVEDRNKNWIPTKQSKNRKIDGFAATLDAHV  573
            L+D+K+M+LDGK+I+NN+ + +WY++NV+L  DRN NW+P+KQS+ RKIDGFAA L++  
Sbjct  479  LKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYT  538

Query  574  DIVTKLARIKKGPASVGFASLR  595
            DI+ K+    KG +++ F S++
Sbjct  539  DIMNKVVS-DKGEGNIEFISIK  559

38) EHR_00650 in NC_018081


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  469 bits (1767),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 279/567 (50%), Positives = 415/567 (74%), Gaps = 9/567 (1%)

Query  28   ILLEPYPELLTTWYAERLIDESIPASKENILAAKRHILDLERQGTEEFPWIFDEEVGHRP  87
            +L EP P LLTTWYAE++ +  I +SK       RH+  LE  G     W+FDEE++HRP
Sbjct  5    VLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRP  60

Query  88   IRFIEDNCRPTEGDFDRFILQPWQHFIIGSMFGWIHKDTGIRRFREALTFVGRKNGKTSL  147
            IRFIE  C+P+ G   +++LQPWQHFIIGS+FGW+HK+T +RRF+EAL F+GRKNGKT+ 
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  148  ISGLSAYMLGYDNEQGANVYVLANAKDQASILFDKTKEMVKQSPRLDKKYKPQRSLIKDE  207
            ISG++ Y ++ D E+GA++ +LAN   QA ILFD +K M+K SP+LDK+++  R  I  +
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  208  ATFSKMEARASDSKKLDGLNTHFAIFDEIHEFINFKLINVIKKSRGTRRQPLIVYITTAG  267
            AT+SK+ ++ASDS KLDGLNTH +IFDEIHEF ++KLI+VIK+SR++R QPL++YITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  268  YVLDGPLMQYYDNALDCLEHLEDGLDERVFYFVAKLDDVSEADDPRNWIKANPNIGL-MS  326
            Y LDGPL++  + + D L+++ +  DER FY++A LDD  + +D+ NWIKANPN+G+ ++
Sbjct  241  YQLDGPLVDMVEAGRDTLDQIIE--DERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  327  FVDLVTDWKTERNSPQEKADWFTKQFNLFSDIDELSFLDMQTINKNNKIIDWKTMEGEEC  386
            + ++  +W   + +P E++D +TK+FN+F++ DE+SF+D  T++KNN I+    +EG  C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  387  VGGYDLSETQDFTSANLEFPIYETGEIAVLEHSWISQERYNNDNNKQRLDAWIKSGDLTV  446
              GYDLSET+DFT+A   F++ + G +AVL HSWI++++ +  N+K     W   G LTV
Sbjct  359  TIGYDLSETEDFTAACATFAL-DNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTV  417

Query  447  TPGSYVDYQFVFDWFVEQSKKYKVLKVRYDRRNSLILNQQMIDFGFVMEEAIQGFTTLGG  506
               +Y+DYQ V++W++  +  Y V K+ YDR N++ LNQ++ ++GF  EE+ QG  TL+ 
Sbjct  418  QDKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSP  477

Query  507  PMKDLKERFLDGKVIYNQQKIFRWYLSNVKLVQDRNNNWMPTKQSKNRKIDGFASVLNSH  566
            ++KDLKE FLDGK+I+N++ + +WY++NV+L  DRN NW+P+KQS+ RKIDGFA+ LN+ 
Sbjct  478  ALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTY  537

Query  567  VSVVEMFAKKSKQTGTVGFISIREMMR  593
              +++      K  G + FISI+++MR
Sbjct  538  TDIMNKVV-SDKGEGNIEFISIKDIMR  563

39) MC28_3173 in NC_018693


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 268/473 (57%), Positives = 377/473 (80%), Gaps = 0/473 (0%)

Query  1    MYGWIHKDTGYRRFREGLIFIGRKNGKTTMISGLSNYAVAKDNEPGARVYVLANTKQQAG  60
            ++GW+HK+T  RRF+E+LIF+GRKNGKTT ISG++NYAV++D E GA + +LAN  +QA 
Sbjct  91   LFGWVHKETKLRRFKEALIFMGRKNGKTTTISGVANYAVSQDGENGAEIHLLANVMKQAR  150

Query  61   ELFDESRAMVQKSPFLRKHLRENQKGIFHDKTHSKIEPRASDSKKLDGLNTHLGIFDEIH  120
             LFDES+AM++ SP L K++R  +  I  D T SKI P+ASDS KLDGLNTH+GIFDEIH
Sbjct  151  ILFDESKAMIKASPKLDKNFRTLRDEIHYDATISKIMPQASDSDKLDGLNTHMGIFDEIH  210

Query  121  EFKNFKLINVIKKSRGARKQPMIVYITTAGYQLEGPLVQYYEIATDVLEGVIDQDRKFYF  180
            EFK++KLI+VIK+SR+AR QP+++YITTAGYQL+GPLV+  E + D L+ +I+++R FY+
Sbjct  211  EFKDYKLISVIKNSRAARLQPLLIYITTAGYQLDGPLVDMVEAGRDTLDQIIEDERTFYY  270

Query  181  MAEMDSVDEIENPELWIKANPNMGVSLDLPSLIDDWNTDKHTDAEKNDWITKQFNLFVDN  240
            +A +D  D+I+++  WIKANPN+GVS++L  + ++W+  K+T AE+ D ITK+FN+F +N
Sbjct  271  LASLDDDDDINDSSNWIKANPNLGVSINLDEMKEEWEKAKRTPAERGDFITKRFNIFANN  330

Query  241  DEMSFVGIEILKRNEKVIDIKGLAGKECVAGYDLSATEDFTSACLEFPLDDGKVFVLSHS  300
            DEMSF++   L++N+ ++ +  L G+ C  GYDLS TEDFT+AC  F+LD+GKV VLSHS
Sbjct  331  DEMSFIDYPTLQKNNEIVSLEELEGRPCTIGYDLSETEDFTAACATFALDNGKVAVLSHS  390

Query  301  WVPQAKVDRDNENISFKEFEDKGWLTIIPGEYVKYEYVYDWFVKQSEQYFIKKITYDPAN  360
            W+P+ KV+  NE+I+++E E+ G LT+    Y+ Y+ V +W++K +E+Y + KITYD AN
Sbjct  391  WIPKHKVEYSNEKIPYREWEEDGLLTVQDKPYIDYQDVLNWIIKMNEHYVVEKITYDRAN  450

Query  361  AYRLNEDLKAYGFNTESVRQGHLTLSPALKDVKELLLDGKIISNKNRLFRWYMNNVKLVE  420
            A++LN++LK YGF+TE  RQG LTLSPALKD+KE++LDGKII N+N L +WY+NNV+L  
Sbjct  451  AFKLNQELKNYGFETEETRQGALTLSPALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKL  510

Query  421  DRNGNFLPSKQSKYRKIDGFAAFLNAHTEVIPMLTQLQGDGNIEFISVSDLFK  473
            DRNGN LPSKQS+YRKIDGFAAFLN+ T+++  +   +G+GNIEFIS+ D+ +
Sbjct  511  DRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMNKVVSDKGEGNIEFISIKDIMR  563

40) gp02 in NC_014551


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  460 bits (1735),  Expect = 9e-131, Method: Compositional matrix adjust.
 Identities = 283/564 (51%), Positives = 407/564 (73%), Gaps = 8/564 (1%)

Query  31   ILVQPYPELLTTWYAERLIDGSIPASKENILAAKRHMRDLERQGTDDFPWVFDEEKGHRP  90
            +L +P P LLTTWYAE++ +G I +SK       RH+R LE  G     WVFDEE +HRP
Sbjct  5    VLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRP  60

Query  91   IRFIEKKCKPSKGDHDQLVLQPWQHFVIGSIFGWVHKDTGIRKYREAVDFVGRKNGKTTI  150
            IRFIEK CKPSKG   QLVLQPWQHF+IGS+FGWVHK+T +R+++EA+ F+GRKNGKTT 
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  151  ISGTSNYMLGFDGERGANVYVLANSQKQSSILFNESKAMIENSPYLDKRFKALRSEIRYE  210
            ISG +NY ++ DGE GA++ +LAN  KQ+ ILF+ESKAMI  SP LDK F++LR EI+Y+
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  211  TMKCTMQAMSAEKNNKDGENLHFAVFDEIHEYVDYALINVMKKSRGMRKQPLIIYITTAG  270
            +    + + +++ ++ DG N H ++FDEIHE+ DY LI+V+K+SR+ R QPL+IYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  271  YVLDGPLMNFFEAGKEClenleddldeRTFYYLAKLDKPEEADDPRMWIKANPNIGL-MD  329
            Y LDGPL++  EAG++     +   DERTFYYLA LD  ++ +D+  WIKANPN+G+ ++
Sbjct  241  YQLDGPLVDMVEAGRD--TLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  330  FVNLVTDYKKDRKNPQELADWLTKQFNIFSDVDELSFVDVATINKNNKEIDIDLLKGREC  389
            + ++  +  K ++ P E +D +TK+FNIF++ DE+SF+D +T++KNN  + ++ L GR C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  390  VGGYDLSETEDFTSACLEFPLDNGEIFFLTHSWIPEARYNRDNNQQRLDEWRKKGYLTII  449
              GYDLSETEDFT+AC  F+LDNG +  L+HSWIP  + +  N++    EW   G LT +
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLT-V  417

Query  450  PEAEYVNYEVVLDWFIEKSKLYKIKKIGYDKSKALFLNAALEEHGFETEIVIQGFKTLGG  509
             +  Y++Y+ VL+W+I  +  Y + KI YD+++A+ LN  L + GFETE   QG  TL+ 
Sbjct  418  QDKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSP  477

Query  510  PMQNFKELMLDGKVIFNNNKLFRWYLNNVRMVKDRNNNWMPTKQSKNRKIDGVAAALTAH  569
            +++++KE+ LDGK+IFNNN L +WY+NNV++  DRN NW+P+KQS+ RKIDG AA L + 
Sbjct  478  ALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTY  537

Query  570  TFVIPMIIKPKKSGKVKYYSVADL  593
            T ++  ++  K  G++ + S+ D+
Sbjct  538  TDIMNKVVSDKGEGNIEFISIKDI  561

41) LL3_00908 in NC_017190


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  460 bits (1735),  Expect = 9e-131, Method: Compositional matrix adjust.
 Identities = 283/564 (51%), Positives = 407/564 (73%), Gaps = 8/564 (1%)

Query  31   ILVQPYPELLTTWYAERLIDGSIPASKENILAAKRHMRDLERQGTDDFPWVFDEEKGHRP  90
            +L +P P LLTTWYAE++ +G I +SK       RH+R LE  G     WVFDEE +HRP
Sbjct  5    VLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRP  60

Query  91   IRFIEKKCKPSKGDHDQLVLQPWQHFVIGSIFGWVHKDTGIRKYREAVDFVGRKNGKTTI  150
            IRFIEK CKPSKG   QLVLQPWQHF+IGS+FGWVHK+T +R+++EA+ F+GRKNGKTT 
Sbjct  61   IRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTT  120

Query  151  ISGTSNYMLGFDGERGANVYVLANSQKQSSILFNESKAMIENSPYLDKRFKALRSEIRYE  210
            ISG +NY ++ DGE GA++ +LAN  KQ+ ILF+ESKAMI  SP LDK F++LR EI+Y+
Sbjct  121  ISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYD  180

Query  211  TMKCTMQAMSAEKNNKDGENLHFAVFDEIHEYVDYALINVMKKSRGMRKQPLIIYITTAG  270
            +    + + +++ ++ DG N H ++FDEIHE+ DY LI+V+K+SR+ R QPL+IYITTAG
Sbjct  181  ATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG  240

Query  271  YVLDGPLMNFFEAGKEClenleddldeRTFYYLAKLDKPEEADDPRMWIKANPNIGL-MD  329
            Y LDGPL++  EAG++     +   DERTFYYLA LD  ++ +D+  WIKANPN+G+ ++
Sbjct  241  YQLDGPLVDMVEAGRD--TLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSIN  298

Query  330  FVNLVTDYKKDRKNPQELADWLTKQFNIFSDVDELSFVDVATINKNNKEIDIDLLKGREC  389
            + ++  +  K ++ P E +D +TK+FNIF++ DE+SF+D +T++KNN  + ++ L GR C
Sbjct  299  LDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPC  358

Query  390  VGGYDLSETEDFTSACLEFPLDNGEIFFLTHSWIPEARYNRDNNQQRLDEWRKKGYLTII  449
              GYDLSETEDFT+AC  F+LDNG +  L+HSWIP  + +  N++    EW   G LT +
Sbjct  359  TIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLT-V  417

Query  450  PEAEYVNYEVVLDWFIEKSKLYKIKKIGYDKSKALFLNAALEEHGFETEIVIQGFKTLGG  509
             +  Y++Y+ VL+W+I  +  Y + KI YD+++A+ LN  L + GFETE   QG  TL+ 
Sbjct  418  QDKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSP  477

Query  510  PMQNFKELMLDGKVIFNNNKLFRWYLNNVRMVKDRNNNWMPTKQSKNRKIDGVAAALTAH  569
            +++++KE+ LDGK+IFNNN L +WY+NNV++  DRN NW+P+KQS+ RKIDG AA L + 
Sbjct  478  ALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTY  537

Query  570  TFVIPMIIKPKKSGKVKYYSVADL  593
            T ++  ++  K  G++ + S+ D+
Sbjct  538  TDIMNKVVSDKGEGNIEFISIKDI  561

42) HN6_00658 in NC_017481


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  426 bits (1603),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 279/560 (50%), Positives = 402/560 (72%), Gaps = 7/560 (1%)

Query  7    LDKPSPVVLTTYYAKMVVEGDIPAGKNIILACKRHLRDLERQGDEDFPWVFDEEKAHRPI  66
            L+ PSP +LTT YA  V +G I ++K +   C RHLR LE  G     WVFDEE AHRPI
Sbjct  6    LNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRPI  61

Query  67   RFIEKKCKPSKSVNAQLILQPWQHFIVGSMFGWVHRDTGLrrfregvvfvgrKNGKTTLE  126
            RFIEK CKPSK+ + QL+LQPWQHFI+GS+FGWVH++T LRRF+E+++F+GRKNGKTT  
Sbjct  62   RFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTI  121

Query  127  SGLADYMAGFDGERGANVYFLANAQVQARKLYDESKAMIEHSPYLAKRFVTTRSEIRFPK  186
            SG+A+Y  + DGE GA++ +LAN   QAR L+DESKAMI  SP L K F T R EI++  
Sbjct  122  SGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDA  181

Query  187  TNSTIVPMSVEKKNKDGENVHFAVFDEIHEYKDYFLISAMKQARGARLQPLIMYISTAGY  246
            T S I+P + +  + DG N H ++FDEIHE+KDY LIS +K++R+ARLQPL++YI+TAGY
Sbjct  182  TISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGY  241

Query  247  VLDGPLMDFIDNGKEALSDYDAHVDERTFYYLASLDKVEESDDPELWIKANPNLCL-MDT  305
             LDGPL+D ++ G+++L +     DERTFYYLASLD  ++ +D+  WIKANPNL + ++ 
Sbjct  242  QLDGPLVDMVEAGRDTLDQIIE--DERTFYYLASLDDDDDINDSSNWIKANPNLGVSINL  299

Query  306  VNLISDYIKDKRTPAEYATWLTKQFNIFSSTDELSFVTIETINKNKRMIDEDTLLGRSCI  365
             ++  +  K KRTPAE +  +TK+FNIF++ DE+SF+   T++KN+ ++  + L GR+C 
Sbjct  300  DEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCT  359

Query  366  GGYDLSETEDFTATGLEFKLDDGSIFWKMQSFVPEERVRIDKNPERLQEWEKQGYLTIVP  425
             GYDLSETEDFTA+   F LD+G +    +S +P ++V   ++    +EWE +G LT+  
Sbjct  360  IGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQD  419

Query  426  GEYVNYEYVYNWFVEQAKKYKIQQINYDPNKALFLNQSLQQYGFNTKVVRQGFTTLGGPM  485
              Y++Y+ V NW++     Y +++I YD  +A+ LNQ L++YGF+T   RQG  TL+ ++
Sbjct  420  KPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPAL  479

Query  486  QNMKELLLDGKVVTNNNLMFRWYLNNVKLVTDRNNNWMPTKQSRNRKIDGFAALLNAHES  545
            +++KE++LDGK++ NNN + +WY+NNV+L  DRN NW+P+KQSR RKIDGFAA+LN+   
Sbjct  480  KDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTD  539

Query  546  LWENLNVKEKKARIKFVSLR  565
            + +++      + I F+S++
Sbjct  540  IMNKVVSDKGEGNIEFISIK  559

43) LSL_0783 in NC_007929


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  425 bits (1601),  Expect = 3e-120, Method: Compositional matrix adjust.
 Identities = 279/560 (50%), Positives = 402/560 (72%), Gaps = 7/560 (1%)

Query  30   LDKPSPVVLTTYYAKMVVEGDIPAGKNIILACKRHLRDLERQGDEDFPWVFDEEKAHRPI  89
            L+ PSP +LTT YA  V +G I ++K +   C RHLR LE  G     WVFDEE AHRPI
Sbjct  6    LNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGK----WVFDEELAHRPI  61

Query  90   RFIEKKCKPSKSVNAQLILQPWQHFIVGSMFGWVHRDTGLrrfregvvfvgrKNGKTTLE  149
            RFIEK CKPSK+ + QL+LQPWQHFI+GS+FGWVH++T LRRF+E+++F+GRKNGKTT  
Sbjct  62   RFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTI  121

Query  150  SGLADYMAGFDGERGANVYFLANAQVQARKLYDESKAMIEHSPYLAKRFVTTRSEIRFPK  209
            SG+A+Y  + DGE GA++ +LAN   QAR L+DESKAMI  SP L K F T R EI++  
Sbjct  122  SGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDA  181

Query  210  TNSTIVPMSVEKKNKDGENVHFAVFDEIHEYKDYFLISAMKQARGARLQPLIMYISTAGY  269
            T S I+P + +  + DG N H ++FDEIHE+KDY LIS +K++R+ARLQPL++YI+TAGY
Sbjct  182  TISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGY  241

Query  270  VLDGPLMDFIDNGKEALSDYDAHVDERTFYYLASLDKVEESDDPELWIKANPNLCL-MDT  328
             LDGPL+D ++ G+++L +     DERTFYYLASLD  ++ +D+  WIKANPNL + ++ 
Sbjct  242  QLDGPLVDMVEAGRDTLDQIIE--DERTFYYLASLDDDDDINDSSNWIKANPNLGVSINL  299

Query  329  VNLISDYIKDKRTPAEYATWLTKQFNIFSSTDELSFVTIETINKNKRMIDEDTLLGRSCI  388
             ++  +  K KRTPAE +  +TK+FNIF++ DE+SF+   T++KN+ ++  + L GR+C 
Sbjct  300  DEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCT  359

Query  389  GGYDLSETEDFTATGLEFKLDDGSIFWKMQSFVPEERVRIDKNPERLQEWEKQGYLTIVP  448
             GYDLSETEDFTA+   F LD+G +    +S +P ++V   ++    +EWE +G LT+  
Sbjct  360  IGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQD  419

Query  449  GEYVNYEYVYNWFVEQAKKYKIQQINYDPNKALFLNQSLQQYGFNTKVVRQGFTTLGGPM  508
              Y++Y+ V NW++     Y +++I YD  +A+ LNQ L++YGF+T   RQG  TL+ ++
Sbjct  420  KPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPAL  479

Query  509  QNMKELLLDGKVVTNNNLMFRWYLNNVKLVTDRNNNWMPTKQSRNRKIDGFAALLNAHES  568
            +++KE++LDGK++ NNN + +WY+NNV+L  DRN NW+P+KQSR RKIDGFAA+LN+   
Sbjct  480  KDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTD  539

Query  569  LWENLNVKEKKARIKFVSLR  588
            + +++      + I F+S++
Sbjct  540  IMNKVVSDKGEGNIEFISIK  559

44) EFAU085_02466 in NC_021994


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  357 bits (1342),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 220/437 (51%), Positives = 328/437 (76%), Gaps = 4/437 (0%)

Query  2    VAYDDEQGANVYVLANARDQASLLFDKAAEMVKQSPALFKKFGKPKRSSINYAPAFSKME  61
            V+ D+E+GA++ +LAN   QA +LFD +  M+K SP L K+F +  R  I+Y +++SK+ 
Sbjct  129  VSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNF-RTLRDEIHYDATISKIM  187

Query  62   PRASDSRKLDGLNTHFGIFDEIHEFTNYNLINVIKKSRGTRKQPLIVYITTAGYVLDGPL  121
            P+ASDS KLDGLNTH GIFDEIHEF +Y+LI+VIK+SR++R QPL++YITTAGY LDGPL
Sbjct  188  PQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGYQLDGPL  247

Query  122  MSYFEQGVDCLEHLEDDIDERTFYYLAKLDSAEEADDPRLWIKANPNICL-MNFVGMLDD  180
            +   E G D L+++ +D  ERTFYYLA LD  ++ +D+  WIKANPN+ + +N+  M ++
Sbjct  248  VDMVEAGRDTLDQIIED--ERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEMKEE  305

Query  181  YVKDKKDPKEYADWITKQFNLFSDIDELSFVDMPTIKRNNKTIDIETLKGKKCVGGFDLS  240
              K K+ P E +D ITK+FN+F++ DE+SF+D PT+++NN  + +E L G+ C  G+DLS
Sbjct  306  WEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIGYDLS  365

Query  241  ETEDFTAAVLEFPLERGEVFILQHTWIPQARFDRDNNQERIKAWEKVGDLTIIPGDYVNY  300
            ETEDFTAA   F+L+ G V +L H+WIP+ + +  N++   + WE  G LT+    Y++Y
Sbjct  366  ETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKPYIDY  425

Query  301  EYVLNWFVENSKIYDIVKINYDKAKALRLNKELENAGFETNEIRQGFLSLGGPMQNFKEM  360
            + VLNW++  +  Y + KI YD+A+A++LN+EL N GFET+E RQG L+L+ +++++KEM
Sbjct  426  QDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALKDLKEM  485

Query  361  LLDGKVIFNNSKLYRWYLSNVKLVMDRNSNWMPSKQSKSRKIDGFAASLNSHAEVLNMLV  420
            +LDGK+IFNN+ L +WY++NV+L +DRN+NW+PSKQS+ RKIDGFAA LN+ ++++N +V
Sbjct  486  FLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMNKVV  545

Query  421  NPVGTGKVTYYSISDLM  437
            +  G G++ + SI D+M
Sbjct  546  SDKGEGNIEFISIKDIM  562

45) BCAH820_4385 in NC_011773


> NC_007793_P4|24|G24|87162180|YP_494101.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|24163..25854|-|SAUSA300_1404|phiSLT 
ORF 563-like protein, terminase, large subunit
Length=563

 Score =  315 bits (1181),  Expect = 6e-87, Method: Compositional matrix adjust.
 Identities = 230/526 (44%), Positives = 345/526 (66%), Gaps = 9/526 (1%)

Query  18   YAKKVISGKIVTSKKVRKACQRHIRDLQRQDDETFPYEYSVKEANRAIIFIERFCKHSIG  77
            YA +V  GKI TSK V+K C+RH+R L+  ++    ++  +  A+R+I FIE+FCK S G
Sbjct  18   YAEQVTQGKIKTSKYVKKECERHLRYLE--NGGKWVFDEEL--AHRPIRFIEKFCKPSKG  73

Query  78   KMAGKPLLLELWQKFNVGSLFGWVEKETGYRRFLEALIMIARKNGKSTLASAIALYLFMK  137
              + + L+L+ WQ F +GSLFGWV+KET  RRF EALI ++RKNGK+T  S++A Y   +
Sbjct  74   --SKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTISGVANYAVSQ  131

Query  138  DNEYGARVYTLANKRDQAKLVFEEAKRMVKQSPALRRRVRIIRDKLYYNAMNSELEPLAS  197
            D E GA +  LAN   QA+++F+E+K M+K SP L +  R +RD + Y+A  S + P AS
Sbjct  132  DGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDATISKIMPQAS  191

Query  198  DSKKQDGLNTHGAIFDEIHEYKDRKLINVIQSSYDARTQPLILHITTAGFVLDGPLMKFY  257
            DS K DGLNTH +IFDEIHE+KD KLI+VI++S  AR QPL++ ITTAG+ LDGPL+   
Sbjct  192  DSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGYQLDGPLVDMV  251

Query  258  EVADKMLNETVEHDRFFAFIAEIDPEDDWKDEECWVKANPNLDVTITLEKLREAY-KTYV  316
            E +   L++ +E++R F ++A +D +DD +D   W+KANPNL+V+I L+ ++E   K+  
Sbjct  252  EAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEMKEEWEKAKR  311

Query  317  LNNEVNEFKTKRLNLFVNAAE-KWLEWDVIKKNYEKEYDLEVLEGCMCIGGADLSETTDL  375
               E  +F TKR+N+F N  E   ++   ++KN E    LE LEG  C  G DLSET D+
Sbjct  312  TPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIV-SLEELEGRPCTIGYDLSETEDF  370

Query  376  TSSFLEFPQEDGSVKCIHHSFIPEAKLLNSEDRANYELWVEKGYLTVIPGEVIDYDFVTN  435
            T++   F+ ++G V  + HS IP  K+  S+++  Y  W E G LTV     IDY+ V N
Sbjct  371  TAACATFALDNGKVAVLSHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKPYIDYQDVLN  430

Query  436  WFVRMSEKYHVQEVCYDPFNAAQWFTQMQNLGFEMVKVQQGFKSMNLSMKDFERLLLQGK  495
            W+++M+E Y V+ + YD  NA +   +++N GFE    +QG  +++ ++KD+  ++L+GK
Sbjct  431  WIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALKDLKEMFLDGK  490

Query  496  VNFNGDLMFRWYMSNVKTQKDSTGNIKPVKANKYSRIDGVAAALTA  541
            + FN + + +WY++NV+ + D  GN  P K ++Y +IDG AA L +
Sbjct  491  IIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNT  536