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PAthogenisity Island DataBase (PAI DB)

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Homologs of tnp gene of NC_007168_R4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) tnp
( YP_254536.1 )

transposase for ISSha1

NC_007168
(Staphylococcus haemolyticus JCSC1435)

5e-78

100

2) tnp
( YP_254362.1 )

transposase for ISSha1

NC_007168
(Staphylococcus haemolyticus JCSC1435)

9e-78

3) tnp
( YP_254385.1 )

transposase for ISSha1

NC_007168
(Staphylococcus haemolyticus JCSC1435)

2e-74

4) SAMSHR1132_19860
( YP_005326484.1 )

transposase (pseudogene)

NC_016941
(Staphylococcus aureus MSHR1132)

4e-40

5) C248_2181
( YP_006710878.1 )

transposase

NC_018608
(Staphylococcus aureus 08BA02176)

7e-39

6) ST398NM01_2207
( YP_006196241.1 )

transposase

NC_017673
(Staphylococcus aureus 71193)

7e-39

7) SAPIG2207
( YP_005734965.1 )

transposase

NC_017333
(Staphylococcus aureus ST398)

7e-39

• Sequence Alignments

1) tnp in NC_007168


> NC_007168_R4|24|G24|70727620|YP_254536.1|Staphylococcus_haemolyticus_JCSC1435|+|16119..16643|tnp|SH2621|transposase 
for ISSha1
Length=174

 Score =  283 bits (1061),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%)

Query  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60
            MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL
Sbjct  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60

Query  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120
            FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN
Sbjct  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120

Query  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKLKVA  174
            LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKLKVA
Sbjct  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKLKVA  174

2) tnp in NC_007168


> NC_007168_R4|24|G24|70727620|YP_254536.1|Staphylococcus_haemolyticus_JCSC1435|+|16119..16643|tnp|SH2621|transposase 
for ISSha1
Length=174

 Score =  282 bits (1057),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 171/174 (99%), Positives = 173/174 (99%), Gaps = 0/174 (0%)

Query  42   MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  101
            MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL
Sbjct  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60

Query  102  FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLAAFIENTMTYSN  161
            FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLA+FIENTMTYSN
Sbjct  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120

Query  162  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKQPKVA  215
            LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIK+ KVA
Sbjct  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKLKVA  174

3) tnp in NC_007168


> NC_007168_R4|24|G24|70727620|YP_254536.1|Staphylococcus_haemolyticus_JCSC1435|+|16119..16643|tnp|SH2621|transposase 
for ISSha1
Length=174

 Score =  271 bits (1014),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 165/174 (95%), Positives = 172/174 (99%), Gaps = 0/174 (0%)

Query  1    MNCYRASNRPLYNKYKSYWKLFLKPFETLEAFNYRKVHLFKEWKTEKGIVNYLLDVDEEL  60
            MNCYR+SNRPLYNKYKSYWKLFLKPFETLEAFNY+KVHLFKEWKTEKGI+NYLL+VD EL
Sbjct  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60

Query  61   YNTYHYVHELRRFLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120
            +NTYHYVHELRR+LKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN
Sbjct  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120

Query  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKQPKVA  174
            LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIK+ KVA
Sbjct  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKLKVA  174

4) SAMSHR1132_19860 in NC_016941


> NC_007168_R4|24|G24|70727620|YP_254536.1|Staphylococcus_haemolyticus_JCSC1435|+|16119..16643|tnp|SH2621|transposase 
for ISSha1
Length=174

 Score =  157 bits (580),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 95/170 (56%), Positives = 132/170 (78%), Gaps = 0/170 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLEAFEYRNVALFKEWKTQKGIVKYLLDQDDSL  100
            MN  RT+N+PLYNK+K Y KL+LKP E LEAF+Y++V LFKEWKT+KGI++YLL+ D  L
Sbjct  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60

Query  101  NESYKYINQLRFKLKHNDYEGFIHELKHTPLSQAHSVVQRAIKTLNKHAYFIKNTFGYYN  160
             ++Y Y+++LR  LK+N+ E F H L    LS+  + ++  I+TL + A FI NT  Y N
Sbjct  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120

Query  161  LSNGPLEGINNKIKLIKRTPFGYGSYNHLRNRILLCSKLYAPKSKKEVKQ  210
            L+NGPLEGINNKIKLIKR +FGY +Y++LRNRI++ S+L+A+ +KKE+K+
Sbjct  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKK  170

5) C248_2181 in NC_018608


> NC_007168_R4|24|G24|70727620|YP_254536.1|Staphylococcus_haemolyticus_JCSC1435|+|16119..16643|tnp|SH2621|transposase 
for ISSha1
Length=174

 Score =  153 bits (565),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 93/171 (55%), Positives = 131/171 (77%), Gaps = 0/171 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLGAFEYRKVALFKEWKTQKGIVKYLLDQDDSL  100
            MN  RT+N+PLYNK+K Y KL+LKP E L AF+Y+KV LFKEWKT+KGI++YLL+ D  L
Sbjct  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60

Query  101  NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQTHLVVQRAIKTLNKHAYFIKNTFDYYN  160
             ++Y+Y+++LR  LK+N+ E F H L  + LS+    ++  I+TL + A FI NT  Y N
Sbjct  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120

Query  161  LSNGPLEGINNKIKLIKRTSFSYGNYNHLRNRILLCSKLYAPKSKRKLSNV  211
            L+NGPLEGINNKIKLIKR SF+Y NY++LRNRI++ S+L+A+ +K+ + ++
Sbjct  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKL  171

6) ST398NM01_2207 in NC_017673


> NC_007168_R4|24|G24|70727620|YP_254536.1|Staphylococcus_haemolyticus_JCSC1435|+|16119..16643|tnp|SH2621|transposase 
for ISSha1
Length=174

 Score =  153 bits (565),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 93/171 (55%), Positives = 131/171 (77%), Gaps = 0/171 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLGAFEYRKVALFKEWKTQKGIVKYLLDQDDSL  100
            MN  RT+N+PLYNK+K Y KL+LKP E L AF+Y+KV LFKEWKT+KGI++YLL+ D  L
Sbjct  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60

Query  101  NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQTHLVVQRAIKTLNKHAYFIKNTFDYYN  160
             ++Y+Y+++LR  LK+N+ E F H L  + LS+    ++  I+TL + A FI NT  Y N
Sbjct  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120

Query  161  LSNGPLEGINNKIKLIKRTSFSYGNYNHLRNRILLCSKLYAPKSKRKLSNV  211
            L+NGPLEGINNKIKLIKR SF+Y NY++LRNRI++ S+L+A+ +K+ + ++
Sbjct  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKL  171

7) SAPIG2207 in NC_017333


> NC_007168_R4|24|G24|70727620|YP_254536.1|Staphylococcus_haemolyticus_JCSC1435|+|16119..16643|tnp|SH2621|transposase 
for ISSha1
Length=174

 Score =  153 bits (565),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 93/171 (55%), Positives = 131/171 (77%), Gaps = 0/171 (0%)

Query  41   MNELRTTNQPLYNKFKRYAKLLLKPGEDLGAFEYRKVALFKEWKTQKGIVKYLLDQDDSL  100
            MN  RT+N+PLYNK+K Y KL+LKP E L AF+Y+KV LFKEWKT+KGI++YLL+ D  L
Sbjct  1    MNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVEL  60

Query  101  NDAYQYINQLRFKLKHNDYEGFIHELKHMPLSQTHLVVQRAIKTLNKHAYFIKNTFDYYN  160
             ++Y+Y+++LR  LK+N+ E F H L  + LS+    ++  I+TL + A FI NT  Y N
Sbjct  61   FNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSN  120

Query  161  LSNGPLEGINNKIKLIKRTSFSYGNYNHLRNRILLCSKLYAPKSKRKLSNV  211
            L+NGPLEGINNKIKLIKR SF+Y NY++LRNRI++ S+L+A+ +K+ + ++
Sbjct  121  LTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKL  171