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Homologs of Z4338 gene of NC_002655_P4

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SbBS512_E2142
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-168

93.2

2) SbBS512_E2398
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-167

93.2

3) EC042_pAA024
( - )

NC_017627
(Escherichia coli 042)

e-131

96.1

4) ROD_31801
( - )

NC_013716
(Citrobacter rodentium ICC168)

5e-63

88.8

• Sequence Alignments

1) SbBS512_E2142 in NC_010658


>NC_002655_P4|24|G23|15803530|NP_289563.1|Escherichia_coli_O157:H7_EDL933|+|20979..21329|-|Z4338|hypothetical 
          Length = 351

 Score = 588 bits (1516), Expect = e-168
 Identities = 313/336 (93%)
 Strand = Plus / Minus

Query: 40  ttacaacattgtcagagcgttaaggcgggatgtttttggctgacgccagtccagcttatc 99
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttacaacattgtcagggcgttaaggcgggatgtttttggctgacgccagtccagcttatc 292

Query: 100 gaggagcattgccagttgcgagcgggtaatggataccttgccgtcacgcacagcaggcca 159
           ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 291 gaggagcattgccagttgcgagcgggtaatggataccttaccgtcacgcaccgcaggcca 232

Query: 160 gataaactggccttcctccaggcgtctggtgaacaggcacagaccatcagcatcagccca 219
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 231 gataaactggccttcctccaggcgtttggtgaacaggcacagaccatcagcatcagccca 172

Query: 220 caggattttaatcatgtcaccccgtcggccacggaagatgaacaggtgaccggagaaggg 279
            || |||||||   |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 171 aagaattttaacggtgtccccccgtcggccacggaagataaacaggtgaccggagaaggg 112

Query: 280 attatcattcagcacatgctgtacctgttcacccagcccgttgaaagacttacgcatatc 339
           |||||||||||||||||| ||||||||||| ||||| |||||||| || |||| ||||||
Sbjct: 111 attatcattcagcacatgttgtacctgttctcccagtccgttgaaggatttacacatatc 52

Query: 340 ggttatcccagcaacgagccagatgcgggtgcctga 375
           ||| |  || |||||||||||||| ||||| |||||
Sbjct: 51  ggtaacgccggcaacgagccagatacgggtacctga 16

2) SbBS512_E2398 in NC_010658


>NC_002655_P4|24|G23|15803530|NP_289563.1|Escherichia_coli_O157:H7_EDL933|+|20979..21329|-|Z4338|hypothetical 
          Length = 351

 Score = 586 bits (1512), Expect = e-167
 Identities = 313/336 (93%)
 Strand = Plus / Minus

Query: 97  ttacaacattgtcagtgcgttaaggcgggatgtttttggctgacgccagtccagcttatc 156
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttacaacattgtcagggcgttaaggcgggatgtttttggctgacgccagtccagcttatc 292

Query: 157 gaggagcattgccagttgcgagcgggtaatggataccttgccgtcacgcacagcaggcca 216
           ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 291 gaggagcattgccagttgcgagcgggtaatggataccttaccgtcacgcaccgcaggcca 232

Query: 217 gataaactggccttcctccaggcgtctggtgaacaggcacagaccatcagcatcagccca 276
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 231 gataaactggccttcctccaggcgtttggtgaacaggcacagaccatcagcatcagccca 172

Query: 277 caggattttaatcatgtcaccccgtcggccacggaagatgaacaggtgaccggagaaggg 336
            || |||||||   |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 171 aagaattttaacggtgtccccccgtcggccacggaagataaacaggtgaccggagaaggg 112

Query: 337 attatcattcagcacatgctgtacctgttcacccagcccgttgaaagacttacgcatatc 396
           |||||||||||||||||| ||||||||||| ||||| |||||||| || |||| ||||||
Sbjct: 111 attatcattcagcacatgttgtacctgttctcccagtccgttgaaggatttacacatatc 52

Query: 397 ggttatcccagcaacgagccagatgcgggtgcctga 432
           ||| |  || |||||||||||||| ||||| |||||
Sbjct: 51  ggtaacgccggcaacgagccagatacgggtacctga 16

3) EC042_pAA024 in NC_017627


>NC_002655_P4|24|G23|15803530|NP_289563.1|Escherichia_coli_O157:H7_EDL933|+|20979..21329|-|Z4338|hypothetical 
          Length = 351

 Score = 466 bits (1203), Expect = e-131
 Identities = 245/255 (96%)
 Strand = Plus / Plus

Query: 1   gtgctgaatgataatcccgtctccggccacctgtttatcttccttggccgacggggtgac 60
           |||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||
Sbjct: 97  gtgctgaatgataatcccttctccggtcacctgtttatcttccgtggccgacggggggac 156

Query: 61  accgttaaaattctttgggctgatgctgatggtctgtgcctgttcaccaaacgcctggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 accgttaaaattctttgggctgatgctgatggtctgtgcctgttcaccaaacgcctggag 216

Query: 121 gaaggccagtttatctggcctgcggtacgtgacggcaaggtatccattacccgttcgcaa 180
           |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 217 gaaggccagtttatctggcctgcggtgcgtgacggtaaggtatccattacccgctcgcaa 276

Query: 181 ctggtaatgctcctcgataagctggactggcgtcagccaaaaacatcccgccttaactca 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 277 ctggcaatgctcctcgataagctggactggcgtcagccaaaaacatcccgccttaacgcc 336

Query: 241 ctgacaatgttgtaa 255
           |||||||||||||||
Sbjct: 337 ctgacaatgttgtaa 351

4) ROD_31801 in NC_013716


>NC_002655_P4|24|G23|15803530|NP_289563.1|Escherichia_coli_O157:H7_EDL933|+|20979..21329|-|Z4338|hypothetical 
          Length = 351

 Score = 238 bits (615), Expect = 5e-63
 Identities = 131/146 (90%)
 Strand = Plus / Plus

Query: 10  ctcccatcaggtacccgtatctggctggttgcaggtgtgacagatatgcgtaaatccttc 69
           |||||||||||||||||||||||||| ||||| || || || |||||| |||||||||||
Sbjct: 10  ctcccatcaggtacccgtatctggctcgttgccggcgttaccgatatgtgtaaatccttc 69

Query: 70  aacggactgagggaacaaatacaacatatgctgaatgataacaccttctccgatcacctg 129
           ||||||||| | |||||  |||||||| |||||||||||||  ||||||||| |||||||
Sbjct: 70  aacggactgggagaacaggtacaacatgtgctgaatgataatcccttctccggtcacctg 129

Query: 130 tttatcttccgtagccgacgggggga 155
           |||||||||||| |||||||||||||
Sbjct: 130 tttatcttccgtggccgacgggggga 155


 Score = 230 bits (593), Expect = 2e-60
 Identities = 127/142 (89%)
 Strand = Plus / Plus

Query: 194 accaaacgccttgaagaagggtcgtttatctggcctgcggtgcgtgatggtaagatctcc 253
           ||||||||||| || |||||   |||||||||||||||||||||||| |||||| | |||
Sbjct: 202 accaaacgcctggaggaaggccagtttatctggcctgcggtgcgtgacggtaaggtatcc 261

Query: 254 atgacccgctcacaactggcaatgctcttcaataaactggactggcgtcagccgaaaaca 313
           || |||||||| ||||||||||||||| || |||| ||||||||||||||||| ||||||
Sbjct: 262 attacccgctcgcaactggcaatgctcctcgataagctggactggcgtcagccaaaaaca 321

Query: 314 tcccgccttaacgcactgacaa 335
           |||||||||||||| |||||||
Sbjct: 322 tcccgccttaacgccctgacaa 343


 Score = 45 bits (117), Expect = 8e-05
 Identities = 27/33 (82%)
 Strand = Plus / Plus

Query: 161 gttaaaaacctctgggtagatgctgatggcctg 193
           |||||||  || ||||  ||||||||||| |||
Sbjct: 160 gttaaaattctttgggctgatgctgatggtctg 192