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PAthogenisity Island DataBase (PAI DB)

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Homologs of i-inlJ gene of AJ004808

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) i-inlJ
( YP_004854954.1 )

putative internalin J

NC_016011
(Listeria ivanovii PAM 55)

1e-180

2) LIV_1690
( YP_004855440.1 )

putative soluble internalin

NC_016011
(Listeria ivanovii PAM 55)

3e-105

3) inlC
( NP_465311.1 )

internalin C

NC_003210
(Listeria monocytogenes EGD-e)

2e-60

4) LMOG_03235
( YP_005965770.1 )

internalin C

NC_017545
(Listeria monocytogenes J0161)

2e-60

5) inlC
( YP_006673602.1 )

internalin C

NC_018584
(Listeria monocytogenes ATCC 19117)

2e-60

6) LMOf2365_1812
( YP_014406.1 )

internalin family protein

NC_002973
(Listeria monocytogenes F2365)

2e-60

7) LM220_20060
( YP_008290037.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

2e-60

8) M640_08035
( YP_008302125.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

2e-60

9) LM1816_01047
( YP_008287768.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

2e-60

10) M644_06885
( YP_008283997.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

2e-60

11) M645_14925
( YP_008306349.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

2e-60

12) M638_11795
( YP_008278970.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

2e-60

13) inlB_2
( YP_007015378.1 )

Internalin B

NC_019556
(Listeria monocytogenes LL195)

2e-60

14) inlC
( YP_006676476.1 )

internalin C

NC_018585
(Listeria monocytogenes SLCC2378)

2e-60

15) inlC
( YP_003414096.1 )

internalin C

NC_013766
(Listeria monocytogenes 08-5578)

3e-60

16) inlC
( YP_003417141.1 )

internalin C

NC_013768
(Listeria monocytogenes 08-5923)

3e-60

17) LMRG_02825
( YP_005962899.1 )

internalin C

NC_017544
(Listeria monocytogenes 10403S)

3e-60

18) M642_07015
( YP_008272238.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

3e-60

19) LMLG_2842
( YP_005971598.1 )

internalin C

NC_017547
(Listeria monocytogenes Finland 1988)

3e-60

20) LMKG_03090
( YP_005968754.1 )

internalin C

NC_017546
(Listeria monocytogenes FSL R2-561)

3e-60

21) M639_08255
( YP_008296241.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

3e-60

22) BN418_2146
( YP_007604209.1 )

Internalin B

NC_020557
(Listeria monocytogenes La111)

3e-60

23) BN419_2146
( YP_007607339.1 )

Internalin B

NC_020558
(Listeria monocytogenes N53-1)

3e-60

24) inlC
( YP_006685179.1 )

internalin C

NC_018588
(Listeria monocytogenes SLCC2372)

3e-60

25) inlC
( YP_006688113.1 )

internalin C

NC_018589
(Listeria monocytogenes SLCC2479)

3e-60

26) inlC
( YP_006696675.1 )

internalin C

NC_018592
(Listeria monocytogenes SLCC5850)

3e-60

27) inlC
( YP_006699451.1 )

internalin C

NC_018593
(Listeria monocytogenes SLCC7179)

3e-60

28) inlC
( YP_006754922.1 )

internalin C

NC_018642
(Listeria monocytogenes L312)

3e-60

29) M643_04250
( YP_008280413.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

3e-60

30) M641_12810
( YP_008300046.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

3e-60

31) inlC
( YP_006693800.1 )

internalin C

NC_018591
(Listeria monocytogenes SLCC2482)

3e-60

32) inlC
( YP_006679409.1 )

internalin C

NC_018586
(Listeria monocytogenes SLCC2540)

3e-60

33) inlC
( YP_006682294.1 )

internalin C

NC_018587
(Listeria monocytogenes SLCC2755)

3e-60

34) inlC
( YP_002758496.1 )

internalin C

NC_012488
(Listeria monocytogenes Clip81459)

4e-60

35) MUO_09170
( YP_006206021.1 )

internalin C

NC_017728
(Listeria monocytogenes 07PF0776)

5e-60

36) M637_12050
( YP_008276175.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

1e-59

37) i-inlK
( YP_004854952.1 )

putative internalin K

NC_016011
(Listeria ivanovii PAM 55)

5e-58

38) i-inlD
( YP_004856222.1 )

putative i-internalin D

NC_016011
(Listeria ivanovii PAM 55)

1e-53

• Sequence Alignments

1) i-inlJ in NC_016011


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  625 bits (2363),  Expect = 1e-180, Method: Compositional matrix adjust.
 Identities = 412/415 (99%), Positives = 414/415 (99%), Gaps = 0/415 (0%)

Query  7    LKKVLRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  66
            +KK +RALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  67   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPlkslkklvvlnlD  126
            VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  127  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  186
            ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  187  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  246
            EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  247  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLERKKLFID  306
            APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLERKKLFID
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLERKKLFID  301

Query  307  NLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFN  366
            NLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFN
Sbjct  302  NLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFN  361

Query  367  LNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  421
            LNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN
Sbjct  362  LNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

2) LIV_1690 in NC_016011


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  375 bits (1409),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 233/407 (58%), Positives = 328/407 (81%), Gaps = 0/407 (0%)

Query  13   AMLLLIIGLCINTGSGMKVHAANIPNPMPLNQLFPDSNLAYEMKKNLRKASVTDVVTQPE  72
            A+LL +I  C+NT+ G KV+AA+IP+PMP++++FPD++LA EMK  L K SVTDVVTQ E
Sbjct  8    ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTDVVTQKE  67

Query  73   LDSLRQVNADDSGIQSVEGLQYLTNVEVLYLSGNQITDISPLASLKKLIVLYLERNKLAD  132
            L+S  + NA +  IQS+EGLQYLTN+EVLYLSGNQIT ISPL SLKKL+VL L+ N L+D
Sbjct  68   LESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLDANELSD  127

Query  133  ISGIKKIAKTNPLAHLFLGDNELTDISPlenltnletlsleHNKLSNVQILPSLTNLKEL  192
            IS+I K++ +++L+HLFL +N+LTDIS+L NLTNLETL   +NKLS++Q L+SL +LK L
Sbjct  128  ISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASLEKLKML  187

Query  193  DLRGNKLRDIRGLEKLKNMERLLVSMQQCVNEPVDYQSKLVIPNTFKDMDGKLIAPSYIS  252
             L GN++ DI GLE L+N+E + +  Q+C+NEP+ YQ+ L+IPNT+K ++GKLIAP  I 
Sbjct  188  RLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLIAPKKIR  247

Query  253  NDGTYTDGKLIWNLPAYIKTVSCSFNKEVKIGKSTTMFHGVMTQPLQQKAPEIENSKPIN  312
            N+G Y++ ++ W L++Y+  VS +F+  ++IGK+ + FHG + QPL++K   I+N K+I+
Sbjct  248  NNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLERKKLFIDNLKSIK  307

Query  313  QIFPDVNLAEIVKKSLRKKYITDVVSQVELNKIHEIHADSKDIHSIEGLQHLYNLKRLFL  372
            +IFPD NLAEI++++L+KK +TD+VSQ EL+KI E+HAD +DI SIEGLQ L+NL++L+L
Sbjct  308  EIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYL  367

Query  373  SDNHISNIRPLENSVHLTELYLDNNDLTDENVSELTNLSQLEVLSIR  419
            +DN+IS+IR+LE   +L ELYLDNN+LTD +VS L NL++L+ LSIR
Sbjct  368  ADNQISDIRSLEVLTNLKELYLDNNGLTDKSVSGLINLAHLNTLSIR  414

3) inlC in NC_003210


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (837),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  7    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  66
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  67   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  126
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  127  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  182
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  183  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  242
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  243  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  294
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  36   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  95
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  96   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  153
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  154  TDSLIHLKNLEILSIRNN  171
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  103  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  161
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  162  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  193
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

4) LMOG_03235 in NC_017545


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (837),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 206/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGNYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G+Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.022, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

5) inlC in NC_018584


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (838),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLKDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPLK L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSVNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 86/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L  LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

6) LM220_20060 in NC_021830


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (838),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLKDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPLK L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSVNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 86/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L  LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

7) LM1816_01047 in NC_021829


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (839),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 131/293 (45%), Positives = 209/293 (72%), Gaps = 4/293 (1%)

Query  8    LQNAVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTKLEELSMN  127
            +V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
            +P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

8) LMOf2365_1812 in NC_002973


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (838),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLKDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPLK L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSVNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 86/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L  LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

9) inlB_2 in NC_019556


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (838),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLKDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPLK L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSVNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 86/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L  LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

10) inlC in NC_018585


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (838),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLKDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPLK L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSVNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 86/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L  LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

11) M640_08035 in NC_021839


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (839),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 131/293 (45%), Positives = 209/293 (72%), Gaps = 4/293 (1%)

Query  8    LQNAVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTKLEELSMN  127
            +V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
            +P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

12) M644_06885 in NC_021827


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (839),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 131/293 (45%), Positives = 209/293 (72%), Gaps = 4/293 (1%)

Query  8    LQNAVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTKLEELSMN  127
            +V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
            +P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

13) M645_14925 in NC_021840


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (839),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 131/293 (45%), Positives = 209/293 (72%), Gaps = 4/293 (1%)

Query  8    LQNAVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTKLEELSMN  127
            +V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
            +P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

14) M638_11795 in NC_021825


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  225 bits (838),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLKDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPLK L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSVNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 86/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L  LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.054, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

15) inlC in NC_013768


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

16) LMRG_02825 in NC_017544


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

17) LMLG_2842 in NC_017547


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

18) LMKG_03090 in NC_017546


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

19) BN418_2146 in NC_020557


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

20) BN419_2146 in NC_020558


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

21) inlC in NC_018588


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

22) inlC in NC_018589


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

23) inlC in NC_018592


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

24) inlC in NC_018593


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

25) M642_07015 in NC_021823


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

26) M639_08255 in NC_021837


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

27) inlC in NC_013766


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (836),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/292 (46%), Positives = 205/292 (71%), Gaps = 4/292 (1%)

Query  8    LQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQVFPDPGLANAVKQNLGKQSVTD  67
            +++++ A+L+ ++  C+N + GTKV+A SI +P PI++VFPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  68   LVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVN  127
            +V+QKEL + ++FN+ + NIQS+ G+Q++TNL  L LS NQI+ +SPLK L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  128  RNRLKNLNGI----PSACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  183
             N L ++++I    +S+ L++LFL+NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  184  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWI  243
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  244  SPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEYINVGETEAIFDGTVTQPI  295
            +P  I N G Y +  V W L+ Y DEVSY F E I +G T A F+G V QP+
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/138 (38%), Positives = 87/138 (64%), Gaps = 23/138 (16%)

Query  37   IQRPTPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF  96
            I+   +I+++FPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNEL--RD  154
             NL+ L L++NQISD+ +L  LT+L E                     L+LDNN L  + 
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKE---------------------LYLDNNGLTDKS  398

Query  155  TDSLIHLKNLEILSIRNN  172
              +LI+L +L+ LSIR+N
Sbjct  399  VSGLINLAHLNTLSIRDN  416


 Score = 32.7 bits (104),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 28/94 (30%), Positives = 55/94 (59%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSA-CLSRLFLDNNELRDTDSLIHLK  162
            L  ++++DL +  +L K+ E+  +   + +++G+     L++L+L +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

28) inlC in NC_018642


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

29) inlC in NC_018587


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

30) inlC in NC_018591


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

31) inlC in NC_018586


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

32) M643_04250 in NC_021826


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

33) M641_12810 in NC_021838


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.047, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

34) inlC in NC_012488


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (834),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 131/293 (45%), Positives = 208/293 (71%), Gaps = 4/293 (1%)

Query  7    LQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNLGKQSVTD  66
            +++ + A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  LGK+SVTD
Sbjct  2    VKKSIRALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTD  61

Query  67   LVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTKLEELSMN  126
            +V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L KL  L+++
Sbjct  62   VVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLD  121

Query  127  RNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKSIVMLGFL  182
             N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL SI  L+ L
Sbjct  122  ANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASL  181

Query  183  SKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDPDGRWI  242
             KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K  +G+ I
Sbjct  182  EKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLI  241

Query  243  SPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  295
            +P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  242  APKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  36   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  95
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  96   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  155
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  156  SLIHLKNLEILSIRNN  171
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.051, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  103  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  161
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  162  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  193
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

35) MUO_09170 in NC_017728


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  224 bits (834),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 134/300 (45%), Positives = 210/300 (70%), Gaps = 10/300 (3%)

Query  17   MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNL  76
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P PI+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  77   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  136
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  137  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  192
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  193  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  252
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  253  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  312
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.5 bits (267),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  53   IQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  112
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  113  TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  172
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  173  SLIHLKNLEILSIRNN  188
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.9 bits (101),  Expect = 0.041, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  120  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  178
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  179  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  210
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

36) M637_12050 in NC_021824


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  222 bits (827),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 133/300 (45%), Positives = 209/300 (70%), Gaps = 10/300 (3%)

Query  1    MLKKNNWLQNVVIAMLVLIVGLCINTGSGTKVQAESIQRPTTINQIFPDPGLANAVKQNL  60
            M+KK+ +      A+L+ ++  C+NT+ GTKV+A SI +P  I+++FPDP+LAN +K  L
Sbjct  1    MVKKSIR------ALLLTFIVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITL  54

Query  61   GKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTK  120
            GK+SVTD+V+QKEL + ++FN+ + NI+S+ G+Q++TNL  L LS NQI+ +SPL+ L K
Sbjct  55   GKKSVTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKK  114

Query  121  LEELSMNRNRLKNLNGI----PSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKS  176
            L  L+++ N L ++++I    +S+ L++LF++NN+L D  +L +L NLE L   +NKL S
Sbjct  115  LVVLNLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSS  174

Query  177  IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVK  236
            I  L+ L KL +L L GN++++  GL  L++++ +++  Q C+NEP+ YQP L I NT+K
Sbjct  175  IQALASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIK  234

Query  237  DPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ  296
              +G+ I+P  I N G+Y +  V W L+ Y +EVSY F E I +G T A F+G VIQP++
Sbjct  235  TLEGKLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLE  294


 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/136 (37%), Positives = 87/136 (64%), Gaps = 19/136 (13%)

Query  37   IQRPTTINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFF  96
            I+   +I++IFPD+ LA+ +++ L K+ VTDLVSQ EL  +++ ++D+ +I S+ G+Q++
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYL  359

Query  97   TNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTD  156
             NL+ L L++NQISD+ +L+ LT+L EL ++ N L +                   +   
Sbjct  360  FNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTD-------------------KSVS  400

Query  157  SLIHLKNLEILSIRNN  172
            +LI+L +L+ LSIR+N
Sbjct  401  GLINLAHLNTLSIRDN  416


 Score = 31.4 bits (99),  Expect = 0.049, Method: Compositional matrix adjust.
 Identities = 27/94 (29%), Positives = 56/94 (60%), Gaps = 3/94 (3%)

Query  104  LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSA-CLSRLFVDNNELRDTDSLIHLK  162
            L  ++++DL + ++L K+ E+  +   + +++G+     L++L++ +N++ D  SL  L 
Sbjct  323  LKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLT  382

Query  163  NLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGN  194
            NL  L + NN L  KS+  L  L+ L+ L +++N
Sbjct  383  NLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

37) i-inlK in NC_016011


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  217 bits (808),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 134/295 (46%), Positives = 208/295 (71%), Gaps = 8/295 (2%)

Query  4    KSWLKNLLIAVSVIVITTCITASLETKVQAASLPYPMPISKIFPDRALANEVKRSFKKAS  63
            K  ++ LL++     I +C+ +SL TKV+AAS+P PMPI K+FPD +LANE+K ++ K S
Sbjct  3    KKSIRALLLTF----IVACLNTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKS  58

Query  64   IKDLISQRELDEVQEFNANGLNIKSIEGLQYFTFLKELYLFHNQVSDLSPLKNLTNLNLL  123
            + D+++Q+EL+  +EFNA   NI+SIEGLQY+T L  LYL  NQ++ +SPLK+L +L +L
Sbjct  59   VTDVVTQKELESKNEFNAAHKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVL  118

Query  124  CANDNKLKNLNGL----PSTKLTRLHVDDNELTDADSLAHLTQLEVLTIRKNKLRNIDAL  179
              + N L +++++    +S+ LT+L +++N+LTD  +LA+LT+LE L    NKL +I+AL
Sbjct  119  NLDANELSDISDITKFSSSSALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQAL  178

Query  180  AHLSKLKILDLRYNELRDVSALGELKEVMRAVLACQKCVNEPAEYQPNVVIPNNIKGTEG  239
            A L KLK+L L  N++ D+++L  L+++    +  Q C+NEP  YQP ++IPN IK  EG
Sbjct  179  ASLEKLKMLRLSGNQVSDITGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEG  238

Query  240  ALITPDFISDNGKYINGHVVWNLPAYTKEVNYTFGQNVKVGETETVFNGVVEQPL  294
             LI+P  I +NGKY + +V W L++Y  EV+YTF++ +++G T + F+G V QPL
Sbjct  239  KLIAPKKIRNNGKYAQENVQWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPL  293


 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/112 (45%), Positives = 80/112 (72%), Gaps = 3/112 (2%)

Query  41   PISKIFPDRALANEVKRSFKKASIKDLISQRELDEVQEFNANGLNIKSIEGLQYFTFLKE  100
            +I  IFPD  LA+ ++R++KK  + DL+SQ+ELD ++E +A++ +I SIEGLQY+  L+ 
Sbjct  305  SIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKEVHADDRDITSIEGLQYLFNLNK  364

Query  101  LYLFHNQVSDLSPLKNLTNLNLLCANDNKL--KNLNGLPS-TKLTRLHVDDN  149
            LYL +NQ+SD+ +L  LTNL+ L  ++N L  K+++GL + + L  L + DN
Sbjct  365  LYLADNQISDIRSLEVLTNLKELYLDNNGLTDKSVSGLINLAHLNTLSIRDN  416

38) i-inlD in NC_016011


> AJ004808|24|G2|12054728|CAC20607.1|Listeria_ivanovii_ATCC_19119|+|4273..5523|i-inlJ|-|internalin 
J
Length=416

 Score =  202 bits (752),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 130/293 (45%), Positives = 207/293 (71%), Gaps = 10/293 (3%)

Query  24   NTNLGTKVEAAIIPHPMPIDQIFPDPGLAKAVKEALKKRSVTDVVSQRELDGIRKYLYGN  83
            NT+LGTKV+AA IPHPMPID++FPDP+LA+ +K +L K+SVTDVV+Q+EL++   +  + 
Sbjct  19   NTSLGTKVNAASIPHPMPIDKVFPDPSLANEMKITLGKKSVTDVVTQKELESKNEF-NAA  77

Query  84   DKDIKSLEGLQCLNNLEELHLSRNQISDLSPLKDLAnltllclndnklknlnGI----PS  139
            +K+I+S+EGLQ L NLE L LS NQI+ +SPLK L +L +L L+ N L ++++I    +S
Sbjct  78   HKNIQSIEGLQYLTNLEVLYLSGNQITSISPLKSLKKLVVLNLDANELSDISDITKFSSS  137

Query  140  AKLVRLLVDGNEITDISSLVHVPQLETLTISKNKLSNIDVLAHLTNLRILDLRNNKVRDL  199
            + L +L+++ N++TDIS+L ++ +LETL    NKLS+I+ LA L +L++L L  N+V D+
Sbjct  138  SALTHLFLNNNQLTDISALANLTNLETLDAMDNKLSSIQALASLEKLKMLRLSGNQVSDI  197

Query  200  SAIGNLKKLTLLDAAFQNCVNEPVAYKANLVIPNTIKGPDGALVLPTDISDNGEYTNGYV  259
            +++  L++L  ++   Q+C+NEP+ Y++ L+IPNTIK  +G L+ P  I +NG Y++  V
Sbjct  198  TGLEGLNNLEYVEIINQECINEPICYQPFLIIPNTIKTLEGKLIAPKKIRNNGKYAQENV  257

Query  260  KWKLSAYTKEVSYKYARIIEVGEAEGNFTVTVKQP-----LYLKALENCQGSF  307
            +W LS+Y  EVSY +  +I +G + ++F   V QP     L++  L + +  F
Sbjct  258  QWVLSSYVDEVSYTFDELIRIGKTRAKFHGRVIQPLERKKLFIDNLKSIKEIF  310


 Score = 67.1 bits (235),  Expect = 9e-13, Method: Compositional matrix adjust.
 Identities = 55/139 (40%), Positives = 87/139 (63%), Gaps = 24/139 (17%)

Query  36   IPHPMPIDQIFPDPGLAKAVKEALKKRSVTDVVSQRELDGIRKYLYGNDKDIKSLEGLQC  95
            I +  +I +IFPD+ LA  ++ ALKK+ VTD+VSQ+ELD I+  + ++D+DI S+EGLQ 
Sbjct  300  IDNLKSIKEIFPDANLAEILRRALKKKHVTDLVSQHELDKIKE-VHADDRDITSIEGLQY  358

Query  96   LNNLEELHLSRNQISDLSPLKDLAnltllclndnklknlnGIPSAKLVRLLVDGNEITD-  154
            L NL+ L L+ NQISD+ +L  L                     ++L  L +D N +TD 
Sbjct  359  LFNLNKLYLADNQISDIRSLEVL---------------------TNLKELYLDNNGLTDK  397

Query  155  -ISSLVHVPQLETLTISKN  172
             +S+L+++++L+TL+I  N
Sbjct  398  SVSGLINLAHLNTLSIRDN  416


 Score = 28.7 bits (89),  Expect = 0.32, Method: Compositional matrix adjust.
 Identities = 21/68 (31%), Positives = 43/68 (64%), Gaps = 5/68 (7%)

Query  148  DGNEITDISSLVHVPQLETLTISKNKLSNIDVLAHLTNLRIL-----DLRNNKVRDLSAI  202
            D+ +IT I +L  + +L+ L ++ N++S+I  L  LTNL+ L     +L ++ V +L  +
Sbjct  346  DDRDITSIEGLQYLFNLNKLYLADNQISDIRSLEVLTNLKELYLDNNGLTDKSVSGLINL  405

Query  203  GNLKKLTL  210
            ++L+ L++
Sbjct  406  AHLNTLSI  413