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Homologs of unnamed gene of AF311901

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) sepQ
( YP_003366499.1 )

T3SS structural protein SepQ

NC_013716
(Citrobacter rodentium ICC168)

3e-139

2) sepQ
( YP_003236085.1 )

T3SS structure protein SepQ

NC_013364
(Escherichia coli 11128)

2e-124

3) sepQ
( YP_002331407.1 )

T3SS structure protein SepQ

NC_011601
(Escherichia coli E2348/69)

3e-122

4) ECH74115_5060
( YP_002273164.1 )

protein SepQ

NC_011353
(Escherichia coli EC4115)

1e-118

5) sepQ
( NP_290265.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

1e-118

6) ECs4565
( NP_312592.1 )

SepQ

NC_002695
(Escherichia coli Sakai)

1e-118

7) escQ
( YP_003080477.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

1e-118

8) CDCO157_4300
( YP_006315165.1 )

protein SepQ

NC_017906
(Escherichia coli Xuzhou21)

1e-118

9) sepQ
( YP_003223472.1 )

T3SS structure protein SepQ

NC_013353
(Escherichia coli 12009)

1e-118

10) sepQ
( YP_003232156.1 )

T3SS structure protein SepQ

NC_013361
(Escherichia coli 11368)

2e-118

11) sepQ
( YP_003501871.1 )

sepQ

NC_013941
(Escherichia coli CB9615)

3e-118

12) ECO55CA74_21215
( YP_006161348.1 )

sepQ

NC_017656
(Escherichia coli RM12579)

3e-118

• Sequence Alignments

1) sepQ in NC_013716


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  487 bits (1835),  Expect = 3e-139, Method: Compositional matrix adjust.
 Identities = 302/305 (99%), Positives = 302/305 (99%), Gaps = 0/305 (0%)

Query  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60
            MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   CFWVSEEQLIQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120
            CFWVSEEQL QWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGKNRLNVIILETTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180
            IYPVIENNNGKNRLNVIIL TTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240
            LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYFNI  300
            IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFY NI
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SVVCD  305
            SVVCD
Sbjct  301  SVVCD  305

2) sepQ in NC_013364


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  438 bits (1648),  Expect = 2e-124, Method: Compositional matrix adjust.
 Identities = 257/305 (85%), Positives = 285/305 (94%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSEGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITSEGHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  VYPVIENNNGKNRLNVIILETTVQSLQYLINDNWQFVPHSNTLFFDGYIVPGWTDYPVTE  180
            +YPVIENNNGKNRLNVIIL TTVQSLQYLINDNWQ+VPHSNTLFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWLVINNPLATVKLSDNNLSITDVQAADPLCTISSETVMNR  240
            L +GDSLRLYHVDDSQER+CWLVINNPLATVKLSDNNLS+TDVQAADPLC IS+ETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTINVDIHMLRNVQKDDIIDSTGYHLLGGCQLVRNNITIAYGSIIKINEDFYFTI  300
            IYCAIGTINVDIH LRN++KDD I+S GYHL+GG +L+RNN  IAYG+IIKINEDFY  I
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SVVCD  305
            SVVCD
Sbjct  301  SVVCD  305

3) sepQ in NC_011601


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  430 bits (1620),  Expect = 3e-122, Method: Compositional matrix adjust.
 Identities = 250/305 (82%), Positives = 281/305 (93%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSEGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITSEGHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDMIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPED IKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  VYPVIENNNGENRLNVIILETTVQSLQHLINDNWQFVPHSNALFFDGYIVPGWTDYPVTE  180
            +YPVIENNNG NRLNVIIL TTVQSLQ LINDNWQ+VPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINNPLATVKLSDNNLSVTDVLAADPLCTISSETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VINNPLATVKLSDNNLSVTDV AADPLC IS+ETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCVIGTVHIDIHMLRNVQKDDIIDSTGYHLFGGCQLVRNNTTIAYGSIIKINEDFYFTI  300
            IYC IGT+++DIH LRN++KDD I+S GYHLFGG +L+RNNT IAYG+IIKINEDFY  I
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SVVCD  305
            SVVCD
Sbjct  301  SVVCD  305

4) ECH74115_5060 in NC_011353


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  419 bits (1576),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 249/305 (82%), Positives = 279/305 (92%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITS GHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHSNALFFDGYIVPGWTDYPVTE  180
            IYPVIENNNG NRLNVIIL TTVQSLQYLINDNWQLVPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVlaadllsalsNETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VIN PLATV+LSDNNLSVTDV AAD L  +SNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV  300
            IYCAIGT+++DIH LRN+KKDD I S GYHLFGG +LIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SIVCD  305
            S+VCD
Sbjct  301  SVVCD  305

5) sepQ in NC_002655


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  419 bits (1576),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 249/305 (82%), Positives = 279/305 (92%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITS GHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHSNALFFDGYIVPGWTDYPVTE  180
            IYPVIENNNG NRLNVIIL TTVQSLQYLINDNWQLVPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVlaadllsalsNETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VIN PLATV+LSDNNLSVTDV AAD L  +SNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV  300
            IYCAIGT+++DIH LRN+KKDD I S GYHLFGG +LIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SIVCD  305
            S+VCD
Sbjct  301  SVVCD  305

6) ECs4565 in NC_002695


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  419 bits (1576),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 249/305 (82%), Positives = 279/305 (92%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITS GHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHSNALFFDGYIVPGWTDYPVTE  180
            IYPVIENNNG NRLNVIIL TTVQSLQYLINDNWQLVPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVlaadllsalsNETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VIN PLATV+LSDNNLSVTDV AAD L  +SNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV  300
            IYCAIGT+++DIH LRN+KKDD I S GYHLFGG +LIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SIVCD  305
            S+VCD
Sbjct  301  SVVCD  305

7) escQ in NC_013008


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  419 bits (1576),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 249/305 (82%), Positives = 279/305 (92%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITS GHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHSNALFFDGYIVPGWTDYPVTE  180
            IYPVIENNNG NRLNVIIL TTVQSLQYLINDNWQLVPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVlaadllsalsNETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VIN PLATV+LSDNNLSVTDV AAD L  +SNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV  300
            IYCAIGT+++DIH LRN+KKDD I S GYHLFGG +LIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SIVCD  305
            S+VCD
Sbjct  301  SVVCD  305

8) CDCO157_4300 in NC_017906


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  419 bits (1576),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 249/305 (82%), Positives = 279/305 (92%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITS GHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHSNALFFDGYIVPGWTDYPVTE  180
            IYPVIENNNG NRLNVIIL TTVQSLQYLINDNWQLVPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVlaadllsalsNETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VIN PLATV+LSDNNLSVTDV AAD L  +SNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV  300
            IYCAIGT+++DIH LRN+KKDD I S GYHLFGG +LIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SIVCD  305
            S+VCD
Sbjct  301  SVVCD  305

9) sepQ in NC_013353


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  418 bits (1574),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 245/305 (81%), Positives = 277/305 (91%), Gaps = 0/305 (0%)

Query  1    MNLLNSQLNMKINDFYLPLLSVIGTGRLYITPEGHACHAYFREVSGNGIRFTLTCSGYEG  60
            M+ LNSQ NMKINDFYLPLL+VIG GRLYIT+EGHACHAYFREVSGNG+RFTL+ SGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDMIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPED IKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  VYPVIENNNGENRLNVIILEITVQSLQYLINENWQFVPHSNTIFFDGYIAPGWTDYPVTE  180
            +YPVIENNNG NRLNVIIL  TVQSLQYLIN+NWQ+VPHSNT+FFDGYIAPGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LTVGDSLRLYHVDDSKERECWLVINNPLATVKLCDNNLFITDVQAADLLCAISNEAVMDR  240
            L++GDSLRLYHVDDS+ER CWLVINNPLATVKL DNNL +TDVQAAD LC ISNE+VM+R
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCVIGTIHVDIHMLRNAKKDDIIDSTGYHLFGGCRLIRNNTTIAYGSIVKINEDFYFTV  300
            IYC IGTI+VDIH LRN KKDD I+S GYHLFGG RLIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SLVCD  305
            S+VCD
Sbjct  301  SVVCD  305

10) sepQ in NC_013361


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  418 bits (1573),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 244/305 (80%), Positives = 277/305 (91%), Gaps = 0/305 (0%)

Query  1    MNLLNSQLNMKINDFYLPLLSVIGTGRLYITPEGHACHAYFREVSGNGIRFTLTCSGYEG  60
            M+ LNSQ NMKINDFYLPLL+VIG GRLYIT+EGHACHAYFREVSGNG+RFTL+ SGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDMIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPED IKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  VYPVIENNNGENRLNVIILEITVQSLQYLINENWQFVPHSNTIFFDGYIAPGWTDYPVTE  180
            +YPVIENNNG NRLNVIIL  TVQSLQYLIN+NWQ+VPHSNT+FFDGYIAPGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LTVGDSLRLYHVDDSKERECWLVINNPLATVKLCDNNLFIADVQAADLLCTISNEAVMDR  240
            L++GDSLRLYHVDDS+ER CWLVINNPLATVKL DNNL ++DVQAAD LC ISNE+VM+R
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCVIGTIHVDIHMLRNAKKDDIIDSTGYHLFGGCRLIRNNTTIAYGSIVKINEDFYFTV  300
            IYC IGTI+VDIH LRN KKDD I+S GYHLFGG RLIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SLVCD  305
            S+VCD
Sbjct  301  SVVCD  305

11) sepQ in NC_013941


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  417 bits (1570),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 248/305 (82%), Positives = 279/305 (92%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITS GHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQFVPHSNALFFDGYIVPGWTDYPVTE  180
            IYPVIENNNG NRLNVIIL TTVQSLQYLINDNWQ+VPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVlaadllsalsNETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VIN PLATV+LSDNNLSVTDV AAD L  +SNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV  300
            IYCAIGT+++DIH LRN+KKDD I S GYHLFGG +LIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SIVCD  305
            S+VCD
Sbjct  301  SVVCD  305

12) ECO55CA74_21215 in NC_017656


> AF311901|24|G24|15723925|AAL06372.1|Citrobacter_rodentium_DBS100|+|19433..20350|-|-|SepQ
Length=305

 Score =  417 bits (1570),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 248/305 (82%), Positives = 279/305 (92%), Gaps = 0/305 (0%)

Query  1    MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG  60
            MKPL+SQ NMKINDFYLPLLPVIG GRLYITS GHACHAYFREVSG+G+RFTL+YSGYEG
Sbjct  1    MKPLNSQSNMKINDFYLPLLPVIGIGRLYITSEGHACHAYFREVSGNGFRFTLAYSGYEG  60

Query  61   RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD  120
             FW+SEEQ+ QWC+ELFPYS+SRLIPEDTIKLM+LW ++++LPE+D SVDDVQFT LNKD
Sbjct  61   CFWVSEEQLTQWCHELFPYSDSRLIPEDTIKLMLLWAIHATLPEDDASVDDVQFTTLNKD  120

Query  121  IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQFVPHSNALFFDGYIVPGWTDYPVTE  180
            IYPVIENNNG NRLNVIIL TTVQSLQYLINDNWQ+VPHSN+LFFDGYI PGWTDYP+T 
Sbjct  121  IYPVIENNNGKNRLNVIILKTTVQSLQYLINDNWQLVPHSNTLFFDGYIAPGWTDYPITK  180

Query  181  LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVlaadllsalsNETVMNR  240
            L +GDSLRLYHVDDSQER+CW+VIN PLATV+LSDNNLSVTDV AAD L  +SNETVMNR
Sbjct  181  LSIGDSLRLYHVDDSQERKCWLVINNPLATVKLSDNNLSVTDVQAADPLCIISNETVMNR  240

Query  241  IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV  300
            IYCAIGT+++DIH LRN+KKDD I S GYHLFGG +LIRNNT IAYG+I+KINEDFY  +
Sbjct  241  IYCAIGTINVDIHKLRNLKKDDTIGSVGYHLFGGGRLIRNNTIIAYGTIIKINEDFYSNI  300

Query  301  SIVCD  305
            S+VCD
Sbjct  301  SVVCD  305