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Homologs of cap1C gene of U10927

126

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAMSHR1132_01250
( YP_005324647.1 )

capsular polysaccharide synthesis enzyme

NC_016941
(Staphylococcus aureus MSHR1132)

3e-82

2) cap5C
( YP_185038.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_002951
(Staphylococcus aureus COL)

6e-82

3) cap5C
( YP_492869.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_007793
(Staphylococcus aureus FPR3757)

6e-82

4) BN843_1560
( YP_007867235.1 )

Capsular polysaccharide synthesis enzyme Cap5C; Manganese-dependent protein-tyrosine phosphatase

NC_021059
(Staphylococcus aureus M1)

6e-82

5) SAOUHSC_00116
( YP_498716.1 )

capsular polysaccharide biosynthesis protein Cap8C

NC_007795
(Staphylococcus aureus NCTC 8325)

6e-82

6) capC
( YP_001331132.1 )

capsular polysaccharide synthesis enzyme CapC

NC_009641
(Staphylococcus aureus Newman)

6e-82

7) capC
( YP_007582716.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020536
(Staphylococcus aureus ST228)

6e-82

8) capC
( YP_007620430.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020566
(Staphylococcus aureus ST228)

6e-82

9) capC
( YP_007622417.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020568
(Staphylococcus aureus ST228)

6e-82

10) capC
( YP_007576729.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

6e-82

11) capC
( YP_007618444.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

6e-82

12) capC
( YP_007578737.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

6e-82

13) capC
( YP_007580701.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

6e-82

14) capC
( YP_007584680.1 )

Capsular polysaccharide synthesis enzyme Cap8C

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

6e-82

15) cap5C
( YP_001574078.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_010079
(Staphylococcus aureus TCH1516)

6e-82

16) SAVC_00525
( YP_005289706.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_016912
(Staphylococcus aureus VC40)

6e-82

17) capC
( YP_005740901.1 )

Capsular polysaccharide synthesis enzyme Cap5C; Manganese-dependent protein-tyrosine phosphatase

NC_017340
(Staphylococcus aureus 04-02981)

7e-82

18) ECTR2_108
( YP_005748861.1 )

putative tyrosine-protein phosphatase capC

NC_017343
(Staphylococcus aureus ECT-R 2)

7e-82

19) cap5C
( YP_003281072.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_013450
(Staphylococcus aureus ED98)

7e-82

20) SaurJH1_0142
( YP_001315291.1 )

protein-tyrosine-phosphatase

NC_009632
(Staphylococcus aureus JH1)

7e-82

21) SaurJH9_0137
( YP_001245520.1 )

protein-tyrosine-phosphatase

NC_009487
(Staphylococcus aureus JH9)

7e-82

22) capC
( YP_001440740.1 )

capsular polysaccharide synthesis enzyme Cap8C

NC_009782
(Staphylococcus aureus Mu3)

7e-82

23) capC
( NP_370675.1 )

capsular polysaccharide synthesis enzyme Cap8C

NC_002758
(Staphylococcus aureus Mu50)

7e-82

24) capC
( NP_373388.1 )

capsular polysaccharide synthesis protein Cap8C

NC_002745
(Staphylococcus aureus N315)

7e-82

25) capC
( YP_006708902.1 )

capsular polysaccharide synthesis enzyme

NC_018608
(Staphylococcus aureus 08BA02176)

1e-81

26) MS7_0145
( YP_005756610.1 )

PHP domain-containing protein

NC_017351
(Staphylococcus aureus 11819-97)

1e-81

27) SAAG_00634
( YP_008448147.1 )

capsular polysaccharide synthesis enzyme CapC

NC_022113
(Staphylococcus aureus 55/2053)

1e-81

28) ST398NM01_0165
( YP_006194312.1 )

phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis)

NC_017673
(Staphylococcus aureus 71193)

1e-81

29) cap8C
( YP_008167314.1 )

Putative tyrosine-protein phosphatase CapC

NC_021670
(Staphylococcus aureus Bmb9393)

1e-81

30) CA347_162
( YP_008127045.1 )

PHP domain protein

NC_021554
(Staphylococcus aureus CA-347)

1e-81

31) SAOV_0098
( YP_005735616.1 )

capsular polysaccharide biosynthesis protein CapC

NC_017337
(Staphylococcus aureus ED133)

1e-81

32) capC
( YP_006236491.1 )

capsular polysaccharide synthesis enzyme

NC_017763
(Staphylococcus aureus HO 5096 0412)

1e-81

33) cap5C
( YP_005743523.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_017341
(Staphylococcus aureus JKD6008)

1e-81

34) cap5C
( YP_005738301.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_017338
(Staphylococcus aureus JKD6159)

1e-81

35) capC
( YP_005754135.1 )

capsular polysaccharide synthesis enzyme

NC_017349
(Staphylococcus aureus LGA251)

1e-81

36) SAS0126
( YP_042248.1 )

capsular polysaccharide synthesis enzyme

NC_002953
(Staphylococcus aureus MSSA476)

1e-81

37) cap8C
( NP_644941.1 )

capsular polysaccharide synthesis enzyme Cap8C

NC_003923
(Staphylococcus aureus MW2)

1e-81

38) capC
( YP_415605.1 )

capsular polysaccharide synthesis enzyme CapC

NC_007622
(Staphylococcus aureus RF122)

1e-81

39) SAPIG0165
( YP_005732975.1 )

putative tyrosine-protein phosphatase CapC

NC_017333
(Staphylococcus aureus ST398)

1e-81

40) SAT0131_00141
( YP_005751428.1 )

Capsular polysaccharide synthesis enzyme

NC_017347
(Staphylococcus aureus T0131)

1e-81

41) epsC
( YP_005746429.1 )

capsular polysaccharide biosynthesis protein

NC_017342
(Staphylococcus aureus TCH60)

1e-81

42) capC
( YP_005730184.1 )

capsular polysaccharide synthesis enzyme

NC_017331
(Staphylococcus aureus TW20)

1e-81

43) capC
( YP_039618.1 )

capsular polysaccharide synthesis enzyme

NC_002952
(Staphylococcus aureus MRSA252)

2e-81

44) SAKOR_00131
( YP_008490315.1 )

Phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis)

NC_022226
(Staphylococcus aureus CN1)

5e-81

45) capC1
( YP_008484172.1 )

capsular polysaccharide biosynthesis protein CapC

NC_022222
(Staphylococcus aureus 6850)

4e-74

46) M013TW_0141
( YP_005296609.1 )

capsular polysaccharide synthesis enzyme Cap5C

NC_016928
(Staphylococcus aureus M013)

4e-74

47) capC
( YP_008584231.1 )

capsular polysaccharide synthesis enzyme

NC_022442
(Staphylococcus aureus SA957)

4e-74

48) capC
( YP_008586765.1 )

capsular polysaccharide synthesis enzyme

NC_022443
(Staphylococcus aureus SA40)

8e-74

49) SAMSHR1132_24900
( YP_005326985.1 )

putative capsule synthesis protein

NC_016941
(Staphylococcus aureus MSHR1132)

2e-73

50) SLGD_00325
( YP_003470600.1 )

capsular polysaccharide synthesis enzyme Cap5C

NC_013893
(Staphylococcus lugdunensis HKU09-01)

2e-73

51) SLUG_03220
( YP_005759447.1 )

putative capsular polysaccharide synthesisenzyme

NC_017353
(Staphylococcus lugdunensis N920143)

2e-73

52) C248_2732
( YP_006711420.1 )

capsule synthesis protein

NC_018608
(Staphylococcus aureus 08BA02176)

2e-73

53) SAAG_00485
( YP_008450531.1 )

protein-tyrosine-phosphatase

NC_022113
(Staphylococcus aureus 55/2053)

2e-73

54) capC2
( YP_008486451.1 )

capsular polysaccharide biosynthesis capC

NC_022222
(Staphylococcus aureus 6850)

2e-73

55) ST398NM01_2714
( YP_006196781.1 )

phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis)

NC_017673
(Staphylococcus aureus 71193)

2e-73

56) capC
( YP_008169769.1 )

tyrosine-protein phosphatase CapC

NC_021670
(Staphylococcus aureus Bmb9393)

2e-73

57) SAOV_2714c
( YP_005738135.1 )

capsular polysaccharide biosynthesis protein

NC_017337
(Staphylococcus aureus ED133)

2e-73

58) SAEMRSA15_25690
( YP_006238883.1 )

putative capsule synthesis protein

NC_017763
(Staphylococcus aureus HO 5096 0412)

2e-73

59) cap1C
( YP_005746029.1 )

capsular polysaccharide biosynthesis protein Cap1C

NC_017341
(Staphylococcus aureus JKD6008)

2e-73

60) cap1C
( YP_005740681.1 )

capsular polysaccharide biosynthesis protein Cap1C

NC_017338
(Staphylococcus aureus JKD6159)

2e-73

61) M013TW_2645
( YP_005299010.1 )

Manganese-dependent protein -tyrosinephosphatase

NC_016928
(Staphylococcus aureus M013)

2e-73

62) SAR2743
( YP_042081.1 )

capsule synthesis protein

NC_002952
(Staphylococcus aureus MRSA252)

2e-73

63) SA40_2420
( YP_008589057.1 )

putative capsule synthesis protein

NC_022443
(Staphylococcus aureus SA40)

2e-73

64) SA957_2504
( YP_008586592.1 )

putative capsule synthesis protein

NC_022442
(Staphylococcus aureus SA957)

2e-73

65) SAPIG2714
( YP_005735466.1 )

putative tyrosine-protein phosphatase CapC

NC_017333
(Staphylococcus aureus ST398)

2e-73

66) SAT0131_02941
( YP_005753959.1 )

protein-tyrosine-phosphatase

NC_017347
(Staphylococcus aureus T0131)

2e-73

67) capC
( YP_005746606.1 )

protein-tyrosine-phosphatase

NC_017342
(Staphylococcus aureus TCH60)

2e-73

68) SATW20_28000
( YP_005732759.1 )

putative capsule synthesis protein

NC_017331
(Staphylococcus aureus TW20)

2e-73

69) ywqE
( YP_005759051.1 )

tyrosine-protein phosphatase YwqE

NC_017351
(Staphylococcus aureus 11819-97)

5e-73

70) SAKOR_02664
( YP_008492852.1 )

Phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis)

NC_022226
(Staphylococcus aureus CN1)

5e-73

71) cap1C
( YP_187472.1 )

capsular polysaccharide biosynthesis protein Cap1C

NC_002951
(Staphylococcus aureus COL)

5e-73

72) ECTR2_2516
( YP_005751195.1 )

putative tyrosine-protein phosphatase capC

NC_017343
(Staphylococcus aureus ECT-R 2)

5e-73

73) cap1C
( YP_003283570.1 )

capsular polysaccharide biosynthesis protein Cap1C

NC_013450
(Staphylococcus aureus ED98)

5e-73

74) cap1C
( YP_495230.1 )

capsular polysaccharide biosynthesis protein Cap1C

NC_007793
(Staphylococcus aureus FPR3757)

5e-73

75) SaurJH1_2743
( YP_001317852.1 )

protein-tyrosine-phosphatase

NC_009632
(Staphylococcus aureus JH1)

5e-73

76) SaurJH9_2686
( YP_001248038.1 )

protein-tyrosine-phosphatase

NC_009487
(Staphylococcus aureus JH9)

5e-73

77) BN843_27000
( YP_007869720.1 )

putative capsule synthesis protein

NC_021059
(Staphylococcus aureus M1)

5e-73

78) SAS2548
( YP_044662.1 )

capsule synthesis protein

NC_002953
(Staphylococcus aureus MSSA476)

5e-73

79) SAHV_2646
( YP_001443236.1 )

capsular polysaccharide biosynthesis

NC_009782
(Staphylococcus aureus Mu3)

5e-73

80) SAV2662
( NP_373186.1 )

capsular polysaccharide biosynthesis protein

NC_002758
(Staphylococcus aureus Mu50)

5e-73

81) capC
( NP_647399.1 )

capsular polysaccharide biosynthesis

NC_003923
(Staphylococcus aureus MW2)

5e-73

82) SA2455
( NP_375781.1 )

capsular polysaccharide synthesis protein CapC

NC_002745
(Staphylococcus aureus N315)

5e-73

83) SAOUHSC_02998
( YP_501447.1 )

capsular polysaccharide biosynthesis protein Cap5C

NC_007795
(Staphylococcus aureus NCTC 8325)

5e-73

84) capC
( YP_001333595.1 )

capsular polysaccharide biosynthesis protein, CapC

NC_009641
(Staphylococcus aureus Newman)

5e-73

85) capC
( YP_001576527.1 )

capsular polysaccharide biosynthesis protein CapC

NC_010079
(Staphylococcus aureus TCH1516)

5e-73

86) SAVC_12190
( YP_005292015.1 )

capsular polysaccharide biosynthesis protein Cap1C

NC_016912
(Staphylococcus aureus VC40)

5e-73

87) capC
( YP_005743350.1 )

Manganese-dependent protein-tyrosine phosphatase

NC_017340
(Staphylococcus aureus 04-02981)

6e-73

88) SARLGA251_24360
( YP_005756404.1 )

putative capsule synthesis protein

NC_017349
(Staphylococcus aureus LGA251)

6e-73

89) SAB2537c
( YP_417981.1 )

capsular polysaccharide biosynthesis protein

NC_007622
(Staphylococcus aureus RF122)

8e-73

90) CA347_2741
( YP_008129536.1 )

PHP domain protein

NC_021554
(Staphylococcus aureus CA-347)

1e-72

91) capC
( YP_002635443.1 )

capsular polysaccharide biosynthesis protein

NC_012121
(Staphylococcus carnosus TM300)

5e-65

92) A284_01075
( YP_007383990.1 )

Manganese-dependent protein -tyrosinephosphatase

NC_020164
(Staphylococcus warneri SG1)

2e-64

93) SSP0062
( YP_300152.1 )

capsular polysaccharide biosynthesis protein

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

3e-63

94) capC
( YP_252305.1 )

capsular polysaccharide synthesis protein CapC

NC_007168
(Staphylococcus haemolyticus JCSC1435)

5e-60

95) capC
( YP_002633919.1 )

putative tyrosine-protein phosphatase capC

NC_012121
(Staphylococcus carnosus TM300)

6e-53

96) SAI6T6_1019910
( YP_007584535.1 )

Capsular polysaccharide biosynthesis

NC_020536
(Staphylococcus aureus ST228)

8e-53

97) SAI5S5_1019900
( YP_007622249.1 )

Capsular polysaccharide biosynthesis

NC_020566
(Staphylococcus aureus ST228)

8e-53

98) SAI8T7_1019940
( YP_007624238.1 )

Capsular polysaccharide biosynthesis

NC_020568
(Staphylococcus aureus ST228)

8e-53

99) SAI1T1_2019960
( YP_007578548.1 )

Capsular polysaccharide biosynthesis

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

8e-53

100) SAI2T2_1019970
( YP_007620264.1 )

Capsular polysaccharide biosynthesis

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

8e-53

101) SAI3T3_1019960
( YP_007580556.1 )

Capsular polysaccharide biosynthesis

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

8e-53

102) SAI4T8_1019970
( YP_007582521.1 )

Capsular polysaccharide biosynthesis

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

8e-53

103) SAI7S6_1019960
( YP_007586503.1 )

Capsular polysaccharide biosynthesis

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

8e-53

104) Exig_2636
( YP_001815101.1 )

protein-tyrosine-phosphatase

NC_010556
(Exiguobacterium sibiricum 255-15)

5e-46

105) BCO26_0340
( YP_004567785.1 )

protein-tyrosine-phosphatase

NC_015634
(Bacillus coagulans 2-6)

6e-46

106) Bcoa_0882
( YP_004858880.1 )

PHP domain-containing protein

NC_016023
(Bacillus coagulans 36D1)

8e-46

107) BATR1942_16045
( YP_003975059.1 )

protein tyrosine-phosphatase

NC_014639
(Bacillus atrophaeus 1942)

1e-45

108) Geoth_3773
( YP_004589667.1 )

protein-tyrosine-phosphatase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

5e-45

109) epsC
( YP_003352608.1 )

protein-tyrosine-phosphatase

NC_013656
(Lactococcus lactis KF147)

7e-45

110) LCGL_0436
( YP_005870180.1 )

phosphatase EpsC

NC_017490
(Lactococcus garvieae Lg2)

2e-44

111) llh_0430
( YP_005874685.1 )

Manganese-dependent protein-tyrosine phosphatase

NC_017492
(Lactococcus lactis A76)

2e-44

112) Eab7_2443
( YP_006792144.1 )

protein-tyrosine-phosphatase

NC_018665
(Exiguobacterium antarcticum Eab7)

5e-44

113) GTNG_3265
( YP_001127349.1 )

phosphotyrosine-protein phosphatase

NC_009328
(Geobacillus thermodenitrificans NG80-2)

8e-44

114) HMPREF9243_0859
( YP_004321157.1 )

putative tyrosine-protein phosphatase CapC

NC_015278
(Aerococcus urinae ACS-120-V-Col10a)

8e-43

115) ptpZ
( YP_007403655.1 )

phosphotyrosine protein phosphatase

NC_020210
(Geobacillus sp. GHH01)

4e-42

116) I33_3755
( YP_005558643.1 )

putative tyrosine-protein phosphatase CapC

NC_017195
(Bacillus subtilis RO-NN-1)

5e-42

117) EHR_03785
( YP_006486618.1 )

manganese-dependent protein-tyrosine phosphatase

NC_018081
(Enterococcus hirae ATCC 9790)

5e-41

118) cpsC
( YP_003426274.1 )

capsular polysaccharide biosynthesis protein

NC_013791
(Bacillus pseudofirmus OF4)

1e-40

119) ywqE
( YP_003867910.1 )

protein tyrosine-phosphatase

NC_014479
(Bacillus subtilis W23)

1e-40

120) MCCL_1635
( YP_002561038.1 )

hypothetical protein

NC_011999
(Macrococcus caseolyticus JCSC5402)

5e-39

121) MPTP_0526
( YP_004455810.1 )

manganese-dependent protein-tyrosine phosphatase

NC_015516
(Melissococcus plutonius ATCC 35311)

4e-38

122) BMQ_1115
( YP_003561582.1 )

protein phosphatase

NC_014019
(Bacillus megaterium QM B1551)

8e-38

123) BMD_1125
( YP_003596336.1 )

tyrosine-protein phosphatase capC

NC_014103
(Bacillus megaterium DSM 319)

4e-37

124) Bsph_1631
( YP_001697359.1 )

tyrosine-protein phosphatase capC

NC_010382
(Lysinibacillus sphaericus C3-41)

6e-37

125) BCA_5419
( YP_002752629.1 )

putative tyrosine-protein phosphatase CapC

NC_012472
(Bacillus cereus 03BB102)

1e-34

126) Pjdr2_5816
( YP_003014507.1 )

protein-tyrosine-phosphatase

NC_012914
(Paenibacillus sp. JDR-2)

1e-29

• Sequence Alignments

1) SAMSHR1132_01250 in NC_016941


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  297 bits (1113),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 156/254 (62%), Positives = 219/254 (87%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPDIDDGPKNETDMLELLKQATTQGITEIIVTPHHLHPRYNTPIEKVKSCLN  60
            M+DIHNHIL D+DDGPK+  + +ELLKQA ++ +T+I+ TPHHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIQNLAEVQKLNLKFYYGQEIRITDQILKDIDHKDITGINDSRYLLIEFPSNEVPHYTDQ  120
            +++N +E++KL L++Y GQEIRITDQI+ +I +K+I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFIPIIAHPERNKAITQNLDILYDLINKGALSQITTSSLAGISGKKIRKLAI  180
            LF+ELQ+ G+IPIIAHPERNKAI QNLD+L++LIN GALSQIT+SSL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNRKIRPFLMNDLFKDKKLRQYQDDMNEFISNAKLVVNNKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++++LF+D+KL+ Y ++++ ++ N+KLV+ N +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

2) cap5C in NC_002951


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I+GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

3) BN843_1560 in NC_021059


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I+GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

4) SAOUHSC_00116 in NC_007795


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I+GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

5) capC in NC_009641


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I+GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

6) capC in NC_020529


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

7) capC in NC_020564


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

8) capC in NC_020532


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

9) capC in NC_020533


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

10) capC in NC_020537


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

11) capC in NC_020566


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

12) capC in NC_020536


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

13) capC in NC_020568


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQSVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA +++VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

14) cap5C in NC_007793


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I+GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

15) cap5C in NC_010079


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I+GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

16) SAVC_00525 in NC_016912


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1109),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 217/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I+GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

17) capC in NC_017340


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

18) ECTR2_108 in NC_017343


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

19) cap5C in NC_013450


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

20) SaurJH1_0142 in NC_009632


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

21) SaurJH9_0137 in NC_009487


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

22) capC in NC_009782


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

23) capC in NC_002758


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

24) capC in NC_002745


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  296 bits (1108),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

25) capC in NC_018608


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGVSGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

26) MS7_0145 in NC_017351


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

27) SAAG_00634 in NC_022113


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

28) ST398NM01_0165 in NC_017673


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGVSGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

29) cap8C in NC_021670


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

30) CA347_162 in NC_021554


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

31) SAOV_0098 in NC_017337


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

32) capC in NC_017763


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

33) cap5C in NC_017341


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

34) cap5C in NC_017338


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

35) capC in NC_017349


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

36) SAS0126 in NC_002953


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 215/254 (85%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGRKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G +IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

37) cap8C in NC_003923


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 215/254 (85%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGRKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G +IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

38) capC in NC_007622


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

39) SAPIG0165 in NC_017333


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMMDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGVSGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

40) SAT0131_00141 in NC_017347


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

41) epsC in NC_017342


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

42) capC in NC_017331


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  295 bits (1104),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

43) capC in NC_002952


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  294 bits (1103),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 150/254 (60%), Positives = 216/254 (86%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEVIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LL+QA ++ VT+++ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

44) SAKOR_00131 in NC_022226


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  293 bits (1097),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 151/254 (60%), Positives = 215/254 (85%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E ++LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKNRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++ RKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF++K+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

45) capC1 in NC_022222


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  270 bits (1009),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 153/254 (61%), Positives = 215/254 (85%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLALLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E + LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPfllkdlfndkklRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF+LK+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

46) M013TW_0141 in NC_016928


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  270 bits (1009),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 153/254 (61%), Positives = 215/254 (85%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLALLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E + LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPfllkdlfndkklRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF+LK+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

47) capC in NC_022442


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  270 bits (1009),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 153/254 (61%), Positives = 215/254 (85%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLALLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E + LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QNLD+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPfllkdlfndkklRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF+LK+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

48) capC in NC_022443


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  269 bits (1006),  Expect = 8e-74, Method: Compositional matrix adjust.
 Identities = 152/254 (60%), Positives = 215/254 (85%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILPNIDDGPTNETEMLALLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLN  60
            M+DIHNHIL ++DDGP +  E + LLKQA ++ VT+I+ T+HHLH RY+  IEKVK  LN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   HIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQ  120
            ++ +  E++ L L++Y GQEIRITDQI+++I  K I GIN+SRYLLIEFPSNE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSKGFVPIIAHPERNKAISQNIDILYDLINKGALSQVTTASLAGISGKKIRKLAI  180
            LF+ELQ+ G++PIIAHPERNKAI QN+D+L++LIN GALSQ+T++SL G  G++IRKL++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLTHFIGSDAHNTEIRPfllkdlfndkklRDYYEDMNGFISNAKLVVDDKKIPKR  240
            +MI++NL+HFI+SDAH+   RPF+LK+LFND+KL+ YYE++++++ N+KLV+ + +I+K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  MPQQDYKQKRWFGL  254
            +P QDYKQK+WFGL
Sbjct  241  IPTQDYKQKKWFGL  254

49) SAMSHR1132_24900 in NC_016941


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  268 bits (1002),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 148/255 (59%), Positives = 208/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYENSFQHVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N ++ V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEIQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTNEVPHYTKQ  120
            EL+ ++EI+ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+NE+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIANNPELLYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N +LL+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFIASDAHSCDQRPFLMQELFHNNKLKKYTNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHFIASDAHS  +RPF++++LF++ KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

50) SLGD_00325 in NC_013893


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  268 bits (1001),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 142/254 (56%), Positives = 213/254 (84%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILINVDDGPKTKEDAITLLTQAKNEGVTEIVATPHHLSPQYDNSYSQVKESLE  60
            M+DIHNHIL++VDDGPK+ ++AI LL QA++E VT+IVATPHHL  +Y N   +VK  L+
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLLDMDEVKDLGIKLYPGQEIRITDQILSLLQKGDAIGLNNSNYLLIELPSNSVPHYTKR  120
            +L +  E+K LG++LY GQEIRITDQI+  +++ +  G+N+S YLLIE+PSN +P YT++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFDLQSNGYIPIIAHPERNKVITQDLDVLYELINSGAFSQLTSASLMGKLGKKVQKLSI  180
            LF++LQ+ GYIPIIAHPERNK I Q+LD+L+ELIN+GA+SQ+T++SL+G +G++++KLS+
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLSHFIASDAHHVTQRPFIMNSLFSNKNLQKYEENIKNFMNNAKSVIKNENIVKK  240
            +MI++NL+HFIASDAH +T+RPF+++ LF++++L+ Y E++ ++++N+K V+ NE I K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  QPLQEYKHKKLFGL  254
             P Q+YK+KK FGL
Sbjct  241  IPTQDYKQKKWFGL  254

51) SLUG_03220 in NC_017353


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  268 bits (1001),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 142/254 (56%), Positives = 213/254 (84%), Gaps = 0/254 (0%)

Query  1    MIDIHNHILINVDDGPKTKEDAITLLTQAKNEGVTEIVATPHHLSPQYDNSYSQVKESLE  60
            M+DIHNHIL++VDDGPK+ ++AI LL QA++E VT+IVATPHHL  +Y N   +VK  L+
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLLDMDEVKDLGIKLYPGQEIRITDQILSLLQKGDAIGLNNSNYLLIELPSNSVPHYTKR  120
            +L +  E+K LG++LY GQEIRITDQI+  +++ +  G+N+S YLLIE+PSN +P YT++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFDLQSNGYIPIIAHPERNKVITQDLDVLYELINSGAFSQLTSASLMGKLGKKVQKLSI  180
            LF++LQ+ GYIPIIAHPERNK I Q+LD+L+ELIN+GA+SQ+T++SL+G +G++++KLS+
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIENNLSHFIASDAHHVTQRPFIMNSLFSNKNLQKYEENIKNFMNNAKSVIKNENIVKK  240
            +MI++NL+HFIASDAH +T+RPF+++ LF++++L+ Y E++ ++++N+K V+ NE I K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  QPLQEYKHKKLFGL  254
             P Q+YK+KK FGL
Sbjct  241  IPTQDYKQKKWFGL  254

52) C248_2732 in NC_018608


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

53) SAAG_00485 in NC_022113


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

54) capC2 in NC_022222


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

55) ST398NM01_2714 in NC_017673


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

56) capC in NC_021670


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

57) SAOV_2714c in NC_017337


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

58) SAEMRSA15_25690 in NC_017763


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

59) cap1C in NC_017341


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

60) cap1C in NC_017338


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

61) M013TW_2645 in NC_016928


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTNPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ N+E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKSIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG++I+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

62) SAR2743 in NC_002952


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

63) SA40_2420 in NC_022443


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTNPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ N+E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKSIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG++I+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

64) SA957_2504 in NC_022442


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTNPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ N+E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKSIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG++I+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

65) SAPIG2714 in NC_017333


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

66) SAT0131_02941 in NC_017347


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

67) capC in NC_017342


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

68) SATW20_28000 in NC_017331


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  267 bits (1000),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

69) ywqE in NC_017351


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

70) SAKOR_02664 in NC_022226


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

71) cap1C in NC_002951


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

72) ECTR2_2516 in NC_017343


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

73) cap1C in NC_013450


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

74) SaurJH1_2743 in NC_009632


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

75) SaurJH9_2686 in NC_009487


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

76) BN843_27000 in NC_021059


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

77) SAS2548 in NC_002953


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

78) SAHV_2646 in NC_009782


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

79) SAV2662 in NC_002758


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

80) capC in NC_003923


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

81) SA2455 in NC_002745


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

82) SAOUHSC_02998 in NC_007795


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

83) capC in NC_009641


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

84) cap1C in NC_007793


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

85) capC in NC_010079


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

86) SAVC_12190 in NC_016912


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

87) capC in NC_017340


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  2    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  61
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  62   ELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  121
            EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  122  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  181
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  182  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  241
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  242  RPTKPGKVKSFLKWF  256
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

88) SARLGA251_24360 in NC_017349


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (995),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIESLLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++ES L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPIKPGKVKSFLKWF  255
             P +  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

89) SAB2537c in NC_007622


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  266 bits (993),  Expect = 8e-73, Method: Compositional matrix adjust.
 Identities = 143/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATAHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVAT+HHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

90) CA347_2741 in NC_021554


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  265 bits (991),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 210/255 (83%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVDIDDGPKTIEKSIALLKQAKYEGVTSIVATPHHLHPRYDNTFQQVLVKLA  60
            M+DIHNHILVD+DDGPK+I+ +I LLKQA+ E VT IVATPHHLH RY N +++V +KL 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ  120
            EL+ ++E++ L+++L+ GQEIRITD I++G+ N  I+GIN S+YLLIEFP+ E+P YT+Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL  180
            LF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD  240
            + I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPTKPGKVKSFLKWF  255
             PT+  K K   KWF
Sbjct  241  IPTQDYKQK---KWF  252

91) capC in NC_012121


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  240 bits (895),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 132/255 (52%), Positives = 200/255 (79%), Gaps = 1/255 (0%)

Query  1    MIDIHNHIISGIDDGPKNEESMLDLIKQAANQGIKGIVATPHHLHTKYSNDFTNVEKRVD  60
            M+DIHNHI+ ++DDGPK+ +  ++L+KQA ++ + +IVATPHHLH +YSND+ +V  +++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   KLNDSLEIKELGITIYTGQEIRVSDQILSDIDDGKIQGVNYSKYLLIELPSHKVPHFTQR  120
             L+++ EIK LG+ +Y GQEIR++DQI+ +I +  I+G+N S+YLLIE+PS+ +P +T++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LIYEIQTRGYIPVIVHPERNKAIAQDVNLLFELINIGALSQLTASSLTGKSGKNIQKLSF  180
            L+YE+QT GYIP+I HPERNKAI Q+++LLFELIN GALSQ+TASSL G  G+NI+KLS+
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QMIEHNLVHFVASDAHSTEQRPFDFGDLFKTPRLDNYQTVIQTFLKNNEAMVLDENIVAS  240
            +MI+ NL HF+ASDAHS  +RPF + +LF+  +L  Y   ++++LKN   ++ +E I   
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPI-EYRKKKFLGLF  254
             P  +Y++KK +GL+
Sbjct  241  IPTQDYKQKKWFGLL  255

92) A284_01075 in NC_020164


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  238 bits (888),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 133/255 (53%), Positives = 196/255 (77%), Gaps = 3/255 (1%)

Query  1    MIDIHNHILVNMDDGPKTKQAMIQLLTQAKKEGITGIIATPHHLNPKFKNSFQDVSLTLA  60
            M+DIHNHILV++DDGPK+ +  I+LL QA+ E +T+I+ATPHHL+ ++ N ++ V + L 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   EMRKVPEIKDLGIELFPGQEVRLTEAMIKEIEYGSIQGLNKSRYLLIELPFGDVPDNANR  120
            E+++ +EIK LG++L+ GQE+R+T+ +I  I    I+G+N SRYLLIE+P  ++P  +N+
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LCNELQTLGYIPIIAHPERNKAIAKNPYLLYELISNGAMSQLTASSLLGDFGRSAQKLSL  180
            L  ELQT+GYIPIIAHPERNKAI +N  LL+ELI+ GA+SQ+TASSLLGDFG + +KLSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  RFIECHLAHFIASDAHSVEHRPFVLNQLFDERKLMPYRNKIEEMIENAKAIVNNEAVYSD  240
            + I+ +LAHFIASDAHS+ +RPF+L+QLF++RKL +Y + +E  + N+K ++ NE +  +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  KPCEPEMMRRFLRWF  255
             P +    +   +WF
Sbjct  241  IPTQDYKQK---KWF  252

93) SSP0062 in NC_007350


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  234 bits (873),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 132/254 (52%), Positives = 193/254 (76%), Gaps = 1/254 (0%)

Query  1    MIDVHNHLLIGVDDGPQSVEETISLLEQAKKQGITGIVVTPHHLHPKYDNIFADVEWGIN  60
            M+D+HNH+L++VDDGP+S++E+I LL QA+ + +T+IV TPHHLH +Y N +  V   +N
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   KLQHNQQIKDLEIQLYAGQEIRITDQILDDLEQHKVKGINGSKYLLIELPSNSVPHYTKN  120
             L++N +IK L ++LY GQEIRITDQI++++ +  + GIN S+YLLIE+PSN +P YT++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LLYEIQTKGFVPIIAHPERNKAIAKNINLLYELINNGALSQITASSLTGELGKNIQKLSI  180
            L+YE+QT G++PIIAHPERNKAI +N++LL+ELIN GALSQITASSL G++G+NI+KLS+
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QILEHNLVHFVASDAHHSESRPFSLDALFSTPKLKNIESVISMLLDNNEAMIQDKSVVTG  240
            ++++ NL HF+ASDAH   +RPF L  LF+  KLK     +   L N   ++ +  +   
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  RPI-EFKRNKFFGL  253
             P  ++K++K FGL
Sbjct  241  IPTQDYKQKKWFGL  254

94) capC in NC_007168


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  223 bits (831),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 144/255 (57%), Positives = 209/255 (82%), Gaps = 0/255 (0%)

Query  1    MIDIHNHILIDVDDGPKTKEDAIALLKQANDEGVTEIIATPHHLSPTFDNAYENVQQKLN  60
            M+DIHNHIL+DVDDGPK+ ++AI LLKQA+ E VT+I+ATPHHL   + N  E+V+ KLN
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLSELQETKDLGIKLYPGQEIRISDQVLPQLRKGEAIGLNHSRYLLIEFPSRGVPHYANR  120
            +L +  E K LG++LY GQEIRI+DQ++  +++ E  G+N+SRYLLIEFPS  +P Y+N+
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFFELQSEGYIPIIAHPERNKEISQNLDVLYNLINQGALAQLTSSSLqgiqgkkiqkisi  180
            LF+ELQ+ GYIPIIAHPERNK I QNLD+L++LIN GAL+Q+T+SSL G  G++I+K+S+
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  qMIENNLVHFIASDAHHESQRPFIMkslynnkklkkyeknienlINNAKYIVNDEDVIKK  240
            +MI++NL HFIASDAH  ++RPF++K L+N++KLK Y  ++E+ ++N+K ++ +E + K+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  241  QPTQNYNDRKLFGLF  255
             PTQ+Y+++K FGL+
Sbjct  241  IPTQDYKQKKWFGLL  255

95) capC in NC_012121


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  200 bits (742),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 119/242 (50%), Positives = 193/242 (80%), Gaps = 1/242 (0%)

Query  1    MIDMHSHILINVDDGAQNSKEAVQLIQQAIDEGITGIIATPH-FTSHYPNSFEKIKLKIK  59
            M+D+H+HIL++VDDG+++ +EA++L++QA  E +T+I+ATPH +  +Y+N +EK+K+K++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  60   ELCNLKEIQHTKIKIFPGQEVRISEDLIEHIHNGNIKGLNHSRYLLIEFPPNEIPNYTQS  119
            EL N  EI+   ++++ GQE+RI++++IE I N +I G+N+SRYLLIEFP+NEIP YT+ 
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  120  IFSELQEMGYVPIIAHPERNQAIMQDMNLLYELVssgalsqltsssIEGYFGRGLQKASI  179
            +F ELQ MGY+PIIAHPERN+AI+Q+++LL+EL+++GALSQ+T+SS+ G FG  ++K S+
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  180  EMMECNLVHFIASDAHHIEYRPFIMQSLFEEKRLIKLQPQLSELIQNAEAIIHNQTIKRK  239
             M++ NL HFIASDAH I  RPF+++ LF++++L     +L   ++N+  ++ N+ I ++
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNERISKQ  240

Query  240  TP  241
             P
Sbjct  241  IP  242

96) SAI1T1_2019960 in NC_020529


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

97) SAI2T2_1019970 in NC_020564


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

98) SAI3T3_1019960 in NC_020532


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

99) SAI4T8_1019970 in NC_020533


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

100) SAI7S6_1019960 in NC_020537


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

101) SAI5S5_1019900 in NC_020566


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

102) SAI6T6_1019910 in NC_020536


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

103) SAI8T7_1019940 in NC_020568


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  199 bits (739),  Expect = 8e-53, Method: Compositional matrix adjust.
 Identities = 106/199 (54%), Positives = 162/199 (82%), Gaps = 3/199 (1%)

Query  3    VKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPH  62
            +KL EL+ ++E++ L+++L+ GQEIRITD I+ G+ N  I+GIN S+YLLIEFP+ E+P 
Sbjct  57   IKLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPY  116

Query  63   YTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQ  122
            YT+QLF+E+Q+ GYIPIIAHPERN++I +N ++L+EL+  GALSQ+T+SSL+G+FG+NI+
Sbjct  117  YTNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIR  176

Query  123  KLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNF  182
            KLSL+ I+ NLAHF+ASDAHS  +RPF++++LF+++KLK Y +++E+ L+N+  V+ ++ 
Sbjct  177  KLSLKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGKLVLTNER  236

Query  183  VYLDRPTKPGKVKSFLKWF  201
            +  + PT+  K K   KWF
Sbjct  237  ISKQIPTQDYKQK---KWF  252

104) Exig_2636 in NC_010556


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  177 bits (655),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 89/203 (44%), Positives = 154/203 (76%), Gaps = 0/203 (0%)

Query  1    MVDLHCHILPLVDDGPASVEQTLHLIEQAANEGINQIIATPHLFHPQFETTDVDVQLTVA  60
            MVD+H HIL  VDDGP S++++++L+ QA +E + +I+ATPH +H ++      V++ + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELNVLLKKRNIPVTIYPGHEVRITGELIEEVNTGVALSLANSRYILIEFPSTGIPSYARQ  120
            EL+     +++ + +Y G+E+RIT+++IE ++     ++ +SRY+LIEFPS  IP Y+ Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  IFAELISDGYVPVIAHPEKNKAIIQNPTLLFDLISNGAISQVTCASLIGKYGKDVQRFAV  180
            +F EL + GY+P+IAHPE+NKAI+QN  LLF+LI+ GA+SQ+T +SL+G +G++++++++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  ALLENGLAHLVASDAHHLEKRPF  203
             ++++ LAH++ASDAH + +RPF
Sbjct  181  KMIDSNLAHFIASDAHSITNRPF  203

105) BCO26_0340 in NC_015634


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  176 bits (653),  Expect = 6e-46, Method: Compositional matrix adjust.
 Identities = 103/256 (41%), Positives = 182/256 (72%), Gaps = 3/256 (1%)

Query  1    MMDIHCHILPGIDDGAQTIYDSLDMAKQAVSQGIKQIIATPHHMNGKYENRKTEIVQKVN  60
            M+DIH HIL ++DDG+++I +++++ KQA S+ + +I+ATPHH++ +Y N    +  K+N
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELNERLKEEQIDLEILPGQENRIYGEILEDYEKGEIQTLAGTSYLFIEFPSGHVPRYAET  120
            EL++     +++L++  GQE RI ++I+E+  + EI+ +  + YL+IEFPS ++P Y++ 
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LLYEIQVKGLMPIIVHPERNAELIQHPDRLYEMVNNGVATQITAASLTGAFGKKIKKFTE  180
            L+YE+Q  G +PII HPERN  ++Q+ D L+E++N G  +QITA+SL G FG++I+K++ 
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QLIEANLAHFLASDAHNVKTRAFKMDEAADEIE-KKYGADMLYFFTENAELLAGGQSIYR  239
            ++I++NLAHF+ASDAH++  R+F + +  ++   K Y  ++  ++  N+ L+   + I +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLK-NGKLVLTNERISK  239

Query  240  EIP-QPVRQKKLFGLF  254
            +IP Q  +QKK FGL+
Sbjct  240  QIPTQDYKQKKWFGLL  255

106) Bcoa_0882 in NC_016023


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 105/256 (42%), Positives = 182/256 (72%), Gaps = 3/256 (1%)

Query  1    MMDIHCHILPGIDDGAQTIYDSLDMAKQAVSQGIKQIIATPHHMNGKYENRKTEIVQKVN  60
            M+DIH HIL ++DDG+++I +++++ KQA S+ + +I+ATPHH++ +Y N    +  K+N
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELNERLKEEQIDLEILPGQENRIYGEILEDYEKGEIQTLAGTSYLFIEFPSGHVPRYAET  120
            EL++     +++L++  GQE RI ++I+E+  + EI+ +  + YL+IEFPS ++P Y++ 
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LLYEIQVKGLMPIIVHPERNAELIQHPDRLYEMVNNGVATQITAASLTGAFGKKIKKFTE  180
            L+YE+Q  G +PII HPERN  ++Q+ D L+E++N G  +QITA+SL G FG++I+K++ 
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QLIEANLAHFLASDAHNVKTRAFKLDEATDELE-KKYGTDMLYFFTENAELLAKGQAIYR  239
            ++I++NLAHF+ASDAH++  R+F L +  ++   K Y  ++  ++  N+ L+   + I +
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLK-NGKLVLTNERISK  239

Query  240  EIP-QPVKQKKLFGLF  254
            +IP Q  KQKK FGL+
Sbjct  240  QIPTQDYKQKKWFGLL  255

107) BATR1942_16045 in NC_014639


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  175 bits (649),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 107/259 (42%), Positives = 181/259 (70%), Gaps = 9/259 (3%)

Query  1    MVDIHCHILPSMDDGAKQYSESLEMARAASSQGIATIIATPHHKNGKYENDPQAVRQAVG  60
            MVDIH HIL  +DDG+K  +E++E+ + A S+ ++ I+ATPHH + +Y ND + V+  + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLNELLIREQVPLNALPGQEIRLYGELAEDMTAHRLLSLNDTKYILIEFPSEQVPRYAEQ  120
            +L++     ++ LN   GQEIR+ +++ E++    + ++N+++Y+LIEFPS+++P Y++Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFYDLQVKGYIPVIAHPERNREIHENPSLLHNLVKKGAAAQITAGSLAGAFGKRIKNFSL  180
            LFY+LQ  GYIP+IAHPERN+ I +N  LL +L++ GA +QITA+SL G FG+ I+++SL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QLAEAHLVHFIASDAHNLKARDFRYQDGLDVLRKKLGAEY----TYMMTENAELLLQNKT  236
            ++ +++L HFIASDAH++  R F  ++ ++   +KL A Y    +Y+   N+ L+L N  
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFN--DRKLKAYYEELESYLK--NGKLVLTNER  236

Query  237  IYKETPVHV-KRRHFLGLF  254
            I K+ P +  K++  +GL+
Sbjct  237  ISKQIPTQDYKQKKWFGLL  255

108) Geoth_3773 in NC_015660


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  173 bits (642),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 160/211 (76%), Gaps = 1/211 (0%)

Query  1    MIDIHSHILPGVDDGAQTVADAIAMAREAVKEGIATIIATPHYKNGKYDNEKQSIMAAVT  60
            M+DIH+HIL +VDDG++++ +AI + ++A  E ++ I+ATPH  + +Y N+ + +   + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   RFNETIKQHKIPLTVLPGQEIRIHGDLQESFEKGEVLPIAGDSQYLLIEFPFDHVPRYAD  120
             +++     K+ L +  GQEIRI +++ E++ + E+  I  +S+YLLIEFP +++P Y++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGI-NESRYLLIEFPSNEIPYYTN  119

Query  121  RLLFDLQLKGLIPVIAHPERNAEIIENPDRLYELVKKGVLTQLTAASVSGHFGKNIKKFS  180
            +L+++LQ  G IP+IAHPERN  I++N D L+EL++ G L+Q+TA+S+ G+FG+NI+K+S
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  181  LQLIEANLAHFIASDAHNTTSRPFRLREAYD  211
            L++I++NLAHFIASDAH+ T+RPF L++ ++
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFN  210

109) epsC in NC_013656


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  173 bits (640),  Expect = 7e-45, Method: Compositional matrix adjust.
 Identities = 106/257 (42%), Positives = 186/257 (73%), Gaps = 5/257 (1%)

Query  1    MIDIHCHILPGIDDGPKTSGDTLTMLKSAIDEGITTITATPHH-NPQFNNESPLILKKVK  59
            M+DIH HIL ++DDGPK+  +++ +LK A  E +T I ATPHH + +++N+   +  K++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  60   EVQNIIDEHQLPIEVLPGQEVRIYGDLLKEFSEGKLLTAAGTSSYILIEFPSNHVPAYAK  119
            E++N  +  +L +++  GQE+RI ++++  + + K + +   S Y+LIEFPSN++P Y++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKN-KEIEGINESRYLLIEFPSNEIPYYTN  119

Query  120  ELFYNIQLEGLQPILVHPERNSGIIENPDILFDFVEQGVLSQITASSVTGHFGKKIQKLS  179
            +LFY++Q  G  PI+ HPERN +I++N D+LF++++ G LSQITASS+ G+FG++I+KLS
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  180  FKMIENHLTHFVASDAHNVTSRAFKMKEAFEIIE-DSYGSGVSRMFQNNAESVILNESFY  238
            +KMI+++L+HF+ASDAH++T+R+F +K+ F+     +Y   +   + +N+  V+ NE + 
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELES-YLKNGKLVLTNERIS  238

Query  239  QEKPTK-IKTKKFLGLF  254
            ++ PT+  K KK +GL+
Sbjct  239  KQIPTQDYKQKKWFGLL  255

110) LCGL_0436 in NC_017490


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  171 bits (633),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 106/257 (42%), Positives = 186/257 (73%), Gaps = 5/257 (1%)

Query  1    MIDIHCHILPGIDDGAKTSGDTLTMLKSAIDEGITTITATPHH-NPQFNNESPLILKKVK  59
            M+DIH HIL ++DDG+K+  +++ +LK A  E +T I ATPHH + +++N+   +  K++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  60   EVQNIIDEHQLPIEVLPGQEVRIYGDLLKEFSEGKLLTAAGTSSYILIEFPSNHVPAYAK  119
            E++N  +  +L +++  GQE+RI ++++  + + K + +   S Y+LIEFPSN++P Y++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKN-KEIEGINESRYLLIEFPSNEIPYYTN  119

Query  120  ELFYNIQLEGLQPILVHPERNSGIIENPDILFDFIEQGVLSQITASSVTGHFGKKIQKLS  179
            +LFY++Q  G  PI+ HPERN +I++N D+LF++I+ G LSQITASS+ G+FG++I+KLS
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  180  FKMIENHLTHFVASDAHNVTSRAFKMKEAFEIIE-DSYGSGVSRMFQNNAESVILNESFY  238
            +KMI+++L+HF+ASDAH++T+R+F +K+ F+     +Y   +   + +N+  V+ NE + 
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELES-YLKNGKLVLTNERIS  238

Query  239  QEKPTK-IKTKKFLGLF  254
            ++ PT+  K KK +GL+
Sbjct  239  KQIPTQDYKQKKWFGLL  255

111) llh_0430 in NC_017492


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 105/257 (41%), Positives = 186/257 (73%), Gaps = 5/257 (1%)

Query  1    MIDIHCHILPGIDDGAKTSGDTLTMLKSAIDEGITTITATPHH-NPQFNNESPLILKKVK  59
            M+DIH HIL ++DDG+K+  +++ +LK A  E +T I ATPHH + +++N+   +  K++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  60   EVQNIIDEHQLPIEVLPGQEVRIYGDLLKEFSEGKLLTAAGTSSYILIEFPSNHVPAYAK  119
            E++N  +  +L +++  GQE+RI ++++  + + K + +   S Y+LIEFPSN++P Y++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKN-KEIEGINESRYLLIEFPSNEIPYYTN  119

Query  120  ELFYNIQLEELQPILVHPERNSGIIENPDILFDFIEQGVLSQITASSVTGHFGKKIQKLS  179
            +LFY++Q     PI+ HPERN +I++N D+LF++I+ G LSQITASS+ G+FG++I+KLS
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  180  FKMIENHLTHFVASDAHNVTSRAFKMKEAFEIIE-DSYGSGVSRMFQNNAESVISNESFY  238
            +KMI+++L+HF+ASDAH++T+R+F +K+ F+     +Y   +   + +N+  V++NE + 
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELES-YLKNGKLVLTNERIS  238

Query  239  QEKPTK-IKTKKFLGLF  254
            ++ PT+  K KK +GL+
Sbjct  239  KQIPTQDYKQKKWFGLL  255

112) Eab7_2443 in NC_018665


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  170 bits (629),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 105/255 (42%), Positives = 167/255 (66%), Gaps = 6/255 (2%)

Query  1    MVDIHCHLLPLVDDGPSSVEHALQLAEQAVEEGITRIIATPHLYHPQFETSDVDVPLTVA  60
            MVDIH H+L  VDDGP S+++A++L  QA  E +T I+ATPH  H ++      V + + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELNVLLKQRDIPLTVYHGHEVRLIGELIEEMEAGVALPLAASRYILIEFPSTGIPSYARQ  120
            EL+     + + L +Y G+E+R+ +++IE +       +  SRY+LIEFPS  IP Y+ Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  VFAELISDGYIPIIAHPEKNKAIIQNPQLLFDLISNGAISQVTCASLIGKYGKDVQRFAV  180
            +F EL + GYIPIIAHPE+NKAI+QN +LLF+LI+ GA+SQ+T +SL+G +G++++++++
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  ALLENGLAHLVASDAHHTMKRPFYWEQCRKFLSEKLEDWLYEEI--YENNEAVLLNQLVT  238
             ++++ LAH++ASDAH   +RPF   Q   F   KL    YEE+  Y +N  ++L +   
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQL--FNDRKLKAY-YEELESYLKNGKLVLTN-ER  236

Query  239  INPPNPVEKNWKGQW  253
            I+   P +   + +W
Sbjct  237  ISKQIPTQDYKQKKW  251

113) GTNG_3265 in NC_009328


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  170 bits (627),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 103/244 (43%), Positives = 175/244 (72%), Gaps = 7/244 (2%)

Query  1    MVDIHSHILPGIDDGAQTMDEAIAMAKAAVDEGITTIIATPHHHNGKYNNPSTTVTAAVR  60
            MVDIH+HIL ++DDG+++++EAI + K A  E +T I+ATPHH + +Y+N    V   + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLNEQLEHHHIPLTVLTGQEIRIHGDFLENWEQGDILSLCGETPYILIEFPSDHVPRYAN  120
            +L+++ E   + L +  GQEIRI ++++E   + +I ++  E+ Y+LIEFPS+++P Y+N
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGI-NESRYLLIEFPSNEIPYYTN  119

Query  121  QLLFELQLKGLTPVIAHPERNAEIIEKPDRLYELVQKGVLTQVTAASVAGRFGKNIQKFS  180
            QL++ELQ  G  P+IAHPERN  I+++ D L+EL++ G L+Q+TA+S+ G FG+NI+K+S
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  181  MQLIEANWAHLIASDAHNLTSRSFQMRAAYDVINREFGLDAVYFFQENAELLVNGQTVYC  240
            +++I++N AH+IASDAH++T+R+F ++  ++  +R   L A  +++E    L NG+ V  
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFN--DRK--LKA--YYEELESYLKNGKLVLT  233

Query  241  DEPV  244
            +E +
Sbjct  234  NERI  237

114) HMPREF9243_0859 in NC_015278


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  166 bits (614),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 93/212 (44%), Positives = 155/212 (74%), Gaps = 1/212 (0%)

Query  1    MIDLHCHILMGLDDGPKQIEDSLALARQAQDQGVTHIVCTPHHMNRSWMNPRPKVVQAVQ  60
            M+D+H HIL+++DDGPK I++++ L +QAQ + VT+IV TPHH+++   N   KV   ++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   EFQAVLDQEGIDITLFPGQELRLHGEILENIKKGEICFFDEFGKYVLIEFPTGGVPQYTD  120
            E++   +   +++ L+ GQE+R+ ++I+E IK+ EI  ++E ++Y+LIEFP+  +P YT+
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINE-SRYLLIEFPSNEIPYYTN  119

Query  121  RVFYELAIQGIRPVIAHPERNKAIQKDPEILKGLVEKGALGQVTAASLNGKLGRQVKRLS  180
            ++FYEL   G  P+IAHPERNKAI ++ ++L  L++ GAL+Q+TA+SL G +G ++++LS
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  181  LDLIEANLIHVVASDAHHPKRRPFDLAPAYDQ  212
            L +I++NL H +ASDAH    RPF L   +++
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFND  211

115) ptpZ in NC_020210


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  164 bits (605),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 87/211 (42%), Positives = 157/211 (75%), Gaps = 1/211 (0%)

Query  1    MIDIHSHILPGVDDGAKTMDDAIAMAKAAVDEGITTIIATPHHHNGKYDNPSSSVTTAVR  60
            M+DIH+HIL +VDDG+K++++AI + K A  E +T I+ATPHH + +Y N    V   + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLNAQLEQNHIPLKVLAGQEVRLHGDLLDNWEKGDLLPLGEETPYILVEFPFDHVPRYAN  120
            +L+ + E + + L++  GQE+R+ +++++   + ++  + +E+ Y+L+EFP +++P Y+N
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGI-NESRYLLIEFPSNEIPYYTN  119

Query  121  QLLFEMQLKGLTPVIAHPERNSEIIEKPDRLYELVQKGVLTQVTAASVAGFFGKNIQKFS  180
            QL++E+Q  G  P+IAHPERN  I+++ D L+EL++ G L+Q+TA+S+ G FG+NI+K+S
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  181  MQLIEANWVHFIASDAHNLTSRSFQMRTAYD  211
            +++I++N  HFIASDAH++T+R+F ++  ++
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFN  210

116) I33_3755 in NC_017195


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  163 bits (604),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 104/258 (41%), Positives = 180/258 (70%), Gaps = 7/258 (2%)

Query  1    MIDIHCHILPALddgagdsadsIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAAN  60
            M+DIH HIL  +DDG+    ++IE+ + A  + +  I+ATPHH +  Y N+   V+   N
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLNKRLIKEDIPLHVLPGQEIRIYGEVEQDLAKQQLLSLNDTKYILIEFPFDHVPRYAEQ  120
            +L++      + L++  GQEIRI +++ +++ ++++ ++N+++Y+LIEFP +++P Y++Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGAASQITSGSLAGTFGKQLKAFSL  180
            LFY+LQ  GYIP+IAHPERN+ I +N  LL++L++ GA SQIT++SL G FG++++ +SL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  RLVEANLIHFVASDAHNVKTRNFHTQEALYVLE--KEFGSEL-PYMLTENAELLLRNQTI  237
            +++++NL HF+ASDAH++  R F  ++ L+     K +  EL +Y+   N+ L+L N+ I
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQ-LFNDRKLKAYYEELESYL--KNGKLVLTNERI  237

Query  238  FRQ-PPQPVKRRKLFGLF  254
             +Q P Q  K++K FGL+
Sbjct  238  SKQIPTQDYKQKKWFGLL  255

117) EHR_03785 in NC_018081


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  160 bits (591),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 89/211 (43%), Positives = 157/211 (75%), Gaps = 1/211 (0%)

Query  1    MIDLHCHILPGVDDGPKTIDESLKMALKAREQGITHLMCTPHHKNGRFLNPATNVANEVA  60
            M+D+H HIL +VDDGPK+I+E++ +  +A+ + +T+++ TPHH + R+ N   +V   + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   KLQTEFDRNNIELKLLVGQENRITGTLIEDLEKREIIGFGQQKQFLLIEFPTNDVPLYAT  120
             L+ + + +++ L+L VGQE RIT+ +IE++ ++EI G+ + + +LLIEFP+N++P Y+ 
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESR-YLLIEFPSNEIPYYTN  119

Query  121  KLFFELIAKGYIPIIVHPERNRIFINDPNKLLPFLDMGALAQGTAPSIVGLFGRKIQKTA  180
            +LF+EL + GYIPII HPERN+ ++++ + L+ +++ GAL+Q TA+S++G FG +I+K +
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  181  KTMIQLNMVQMIASDAHSLEKRNFYLKEAYH  211
              MI+ N+ + IASDAHS+ +R F LK+ ++
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFN  210

118) cpsC in NC_013791


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  158 bits (585),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 88/210 (42%), Positives = 152/210 (73%), Gaps = 0/210 (0%)

Query  1    MIDIHSHILPGLDDGPESMTSAVEMARKAVEQGITGMIATPHHQNGTYENHYEDILAAVH  60
            M+DIH+HIL ++DDGP S+  A+E+ ++A  + +T+++ATPHH +  Y N+ E +   ++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   RFEDELRAHKIDLHIAPGQEVRLYGNIVADAAHSQLITLNQTNHLLIELPSDHVPSYTAR  120
             + ++    K++L++  GQE+R+ ++I+ +  + ++  +N++  LLIE+PS+++P YT +
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  YLYELQLQGIKPVIAHPERNREIAADSSKLYELIKNGALAQVTASSVAGRFGRNVKKLSM  180
             +YELQ  G  P+IAHPERN+ I  +   L+ELI+ GAL+Q+TASS+ G FG N++KLS+
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  QLIEHELVHFVASDTHNNTNRPNELAKSFD  210
            ++I+ +L HF+ASD+H+ TNRP  L + F+
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFN  210

119) ywqE in NC_014479


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  158 bits (585),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 105/257 (41%), Positives = 177/257 (69%), Gaps = 5/257 (1%)

Query  1    MIDIHCHILPamddgasdsadsIEMARAAVYQGIRTIIATPHHKNGVYENDQAAVREAAD  60
            M+DIH HIL  +DDG+    ++IE+ + A  + +  I+ATPHH +  Y ND   V+   +
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLNKRLIKEDIPLTVLPGQEIRIYGDLERDIAEQQLLTLNDTKYILIEFPFDQVPRYAEQ  120
            +L++      + L +  GQEIRI +++  +I ++++  +N+++Y+LIEFP +++P Y++Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  LFYELQLKGYIPVIAHPERNREIRENPSLLYHLVEKGAASQITSGSLAGTFGKQMKAFSL  180
            LFYELQ  GYIP+IAHPERN+ I +N  LL++L++ GA SQIT++SL G FG++++ +SL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  RLAEANLIHFVASDAHNLKTRDFQYQEALHVLK-KEFGPEF-PYMLTENAELLLQNQTIY  238
            ++ ++NL HF+ASDAH++  R F  ++ ++  K K +  E+ +Y+   N+ L+L N+ I 
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYL--KNGKLVLTNERIS  238

Query  239  RQ-PPQPVKRRKLFGLF  254
            +Q P Q  K++K FGL+
Sbjct  239  KQIPTQDYKQKKWFGLL  255

120) MCCL_1635 in NC_011999


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  153 bits (566),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 102/243 (42%), Positives = 170/243 (70%), Gaps = 11/243 (4%)

Query  1    MIDIHNHILYGVDDGAQTEAETLDMARQAMAEGITDIIATPHHKIQLYDNFGPKIKELTD  60
            M+DIHNHIL +VDDG+++  E++++ +QA +E +TDI+ATPHH   L   ++  I  +  
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHH---LHKRYSNDIEKVKI  57

Query  61   KVNHLIKENNI---ALNVHASQEIRIYGDVITDLKSGKALPLA-GPYVLIEFPSNEVPIY  116
            K+N+L ++++I   +LN+  +QEIRI +++I ++K+     +  + Y+LIEFPSNE+P Y
Sbjct  58   KLNELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYY  117

Query  117  TEQLFTQLAMEGYVPIIAHPERNTELQKNPKKLAELIELGALAQVTAGVVVGNLGHHAQS  176
            T+QLF +L   GY+PIIAHPERN  + +N   L ELI+ GAL+Q+TA+ ++G++G++ + 
Sbjct  118  TNQLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRK  177

Query  177  VAELMIEHQLIHFIASDAHNVNNRNFHMKAAYEMIENKFSS--EVADRFKDNAKKVLLGE  234
            ++  MI+ +L HFIASDAH++ NR F +K  ++  + K+ +  E  + +  N+K VL  E
Sbjct  178  LSLKMIDSNLAHFIASDAHSITNRPFMLKQLFN--DRKLKAYYEELESYLKNGKLVLTNE  235

Query  235  QIP  237
            +I+
Sbjct  236  RIS  238

121) MPTP_0526 in NC_015516


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  150 bits (554),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 85/212 (41%), Positives = 148/212 (70%), Gaps = 2/212 (0%)

Query  1    MIDLHCHILPGIDDGTKTLGDAIKMANTAVDQGIHHILCTPHH-NSQYYASVEKIIHLVA  59
            M+D+H HIL ++DDG K++ +AI + + A  + + +I+ TPHH + +Y   +EK+   + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  60   DLKKELDIREIPLTLYEGQEIRIDGTIMNKIENNNLLFVDLSNRYLLIEFPTREVPAYAE  119
            +LK++ +I+ + L LY GQEIRI + I++ I N+++  ++  +RYLLIEFP+ E+P Y++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGIN-ESRYLLIEFPSNEIPYYTN  119

Query  120  QLFFELLNKGHIPIIVHPERNSMLIENPNRLIPFLKMGVLTQMTAPSYVGIFGKKIAQTA  179
            QLF+EL   G IPII HPERN  +++N + L+ +++ G L+Q+TA+S +G FG++I + +
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  180  KQMLSHNMIYMVASDAHCIEDRSFYLASAYEQ  211
             +M+  N+   +ASDAH I +R+F L   +++
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFND  211

122) BMQ_1115 in NC_014019


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  150 bits (551),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 87/208 (42%), Positives = 154/208 (75%), Gaps = 1/208 (0%)

Query  1    MIDLHCHILHGIDDGAQTIEDSLHMAKQAVSEGIHTIVATPHHQNGKYINEKNEIVQHVE  60
            M+D+H HIL ++DDG+++I++++++ KQA SE +  IVATPHH + +Y N+ + +   ++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   QLNTYLLQENIPLTILPGQESRIYGEIIKDYQNGKILTLNQTGKYLFIELPSGQVPKFTE  120
            +L+      ++ L +  GQE RI ++II + +N  I  +N++ +YL+IE+PS ++P +T+
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINES-RYLLIEFPSNEIPYYTN  119

Query  121  KLVYDIQSEGLTPIIVHPERNGRLIEDPDILYNLVNKGVLTQITASSLTGRFGKRIKKFS  180
            +L Y++Q+ G  PII HPERN  ++++ D+L++L+N G L+QITASSL G FG+ I+K+S
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  181  MDLIEANLTHMIASDAHNLSGRNFYMQE  208
            + +I++NL+H IASDAH+++ R F +++
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQ  207

123) BMD_1125 in NC_014103


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  147 bits (542),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 89/208 (43%), Positives = 155/208 (75%), Gaps = 1/208 (0%)

Query  1    MVDLHCHILPKVDDGALDCNMSFEMAKKALSEGITIIIATPHHQNGRYLNEKKDILQYTQ  60
            MVD+H HIL  VDDG+   N ++E+ K+A SE +T I+ATPHH + RY N+   +    +
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   DLNRLLEKEQVPLTVLPGQETRLYGEILQDYQKGKILTLNDTNKYLFIEFPSSQVPRYTE  120
            +L+   E  ++ L +  GQE R+ ++I+++ ++  I  +N++ +YL+IEFPS+++P YT+
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINES-RYLLIEFPSNEIPYYTN  119

Query  121  KLLFKIQSQGLIPIIVHPERNSHLIEEPDLLYNFVNRGALAQVTAGSVTGYFGKKIKKFS  180
            +L++ +Q+ G IPII HPERN  ++++ DLL++++N GAL+Q+TA+S+ G FG++I+K+S
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  181  HQLIESNLVHFVSSDAHNLENRSFHMRE  208
             ++I+SNL HF++SDAH++ NR+F +++
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQ  207

124) Bsph_1631 in NC_010382


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  146 bits (539),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 84/203 (42%), Positives = 146/203 (72%), Gaps = 0/203 (0%)

Query  1    MIDLHAHILFDVDDGPKEETDSLNMLRQAAREGITDIVCTSHAMHPHYHVPYRKVEALVR  60
            M+D+H HIL DVDDGPK   +++++L+QA  E +TDIV T+H +H +Y     KV   + 
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   YlqqlllqqKIPITLHTGHEVRLHDELLAHLQQKQLHTLAHTHYILLELPSTTIPAYTKE  120
             L++    +K+ + L  G+E+R+ D+++  +++K+++ + +++Y+L+E+PS  IP YT++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  IIRRLKCAGYIPILAHPERNLAIRENPKRLDDLIHEGAFTQITTGSLTGLFGKEVQRLSL  180
            ++  L+  GYIPI+AHPERN AI +N   L +LI+ GA++QIT++SL G FG+++++LSL
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  ALVRANYIHMIGSDAHNVSTRTF  203
             ++ +N  H I+SDAH+++ R F
Sbjct  181  KMIDSNLAHFIASDAHSITNRPF  203

125) BCA_5419 in NC_012472


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 105/257 (41%), Positives = 180/257 (71%), Gaps = 4/257 (1%)

Query  19   MIDLHCHILPGIDDGAQTETDSLAMAHQALSEGIHTIVATPHHQNGKYINERTSIIHGVK  78
            M+D+H HIL ++DDG+++  +++ +  QA SE +  IVATPHH + +Y N+   +   ++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  79   QLNDELQQHNIPLTILPGQEIRLYGDLLEDYEAGKIVTLNETNKYIFIEFPSNHVPRYAE  138
            +L+++ +  ++ L +  GQEIR+ ++++E+     I  +NE+ +Y++IEFPSN++P Y++
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINES-RYLLIEFPSNEIPYYTN  119

Query  139  QLFYELRVKGMIPIIVHPERNAELIERPDKLYNLVNKGALTQVTAgsllgkfgkkikkfs  198
            QLFYEL+  G IPII HPERN  +++  D L++L+N GAL+Q+TA+SLLG FG++I+K+S
Sbjct  120  QLFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLS  179

Query  199  lQLVEHNLTHMIASDAHNTTTRGFHLAESYELIE-KEFGMNVMSDLKENPYLIISGKAIY  257
            L++++ NL+H IASDAH+ T R F L + ++    K +  ++ S LK+   L+++   I 
Sbjct  180  LKMIDSNLAHFIASDAHSITNRPFMLKQLFNDRKLKAYYEELESYLKNGK-LVLTNERIS  238

Query  258  KEDPEQ-IKRKKLFGIF  273
            K+ P Q  K+KK FG++
Sbjct  239  KQIPTQDYKQKKWFGLL  255

126) Pjdr2_5816 in NC_012914


> U10927|23|G23|506699|AAA64642.1|Staphylococcus_aureus_M|+|12712..13479|cap1C|-|type 
1 capsule synthesis gene
Length=255

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 85/210 (41%), Positives = 140/210 (67%), Gaps = 0/210 (0%)

Query  1    MIDIHTHILPGIDDGAADWDYSIQLaraaaaegitgiiatPHHYDGKYSNDKETVIALVS  60
            M+DIH HIL ++DDG+   + +I+L + A +E +T+I+ATPHH + +YSND E V   ++
Sbjct  1    MVDIHNHILVDVDDGPKSINEAIELLKQAQSENVTDIVATPHHLHKRYSNDIEKVKIKLN  60

Query  61   ELNGRLSELAIPLKIQTGQEIRIHSEFLSNWQSGKLLPMGESPYVLIEMPSSQVPKSMEQ  120
            EL+       + L++  GQEIRI  +++   ++  +  + ES Y+LIE PS+++P   +Q
Sbjct  61   ELKNNSEIKKLGLNLYVGQEIRITDQIIEGIKNKEIEGINESRYLLIEFPSNEIPYYTNQ  120

Query  121  VVYELRLLGVRAVIAHPERNAEVVQNPDRLAELVELGAYAQVTTHSLLGGFGRGIEKSAW  180
            + YEL+ +G  ++IAHPERN  +VQN D L EL++ GA +Q+T+ SLLG+FG  I K + 
Sbjct  121  LFYELQTMGYIPIIAHPERNKAIVQNLDLLFELINGGALSQITASSLLGDFGNNIRKLSL  180

Query  181  TLCRQGLIHLVSSDAHHLEWRSFKMKEAYE  210
             +    L H+++SDAH +  R+F +K+ ++
Sbjct  181  KMIDSNLAHFIASDAHSITNRPFMLKQLFN  210