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Homologs of dctP-1 gene of NC_009457_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PCNPT3_01880
( YP_007639156.1 )

TRAP-type C4-dicarboxylate transport system, periplasmic component

NC_020802
(Psychromonas sp. CNPT3)

6e-109

2) HIBPF19700
( YP_004136311.1 )

sialic acid transporter, trap-type c4-dicarboxylate transport system, periplasmic component

NC_014920
(Haemophilus influenzae F3031)

7e-70

3) HICON_13270
( YP_004138470.1 )

sialic acid transporter, TRAP-type C4-dicarboxylate transport system, periplasmic component

NC_014922
(Haemophilus influenzae F3047)

7e-70

4) CGSHiGG_03320
( YP_001292040.1 )

hypothetical protein

NC_009567
(Haemophilus influenzae PittGG)

7e-70

5) HI0146
( NP_438315.1 )

hypothetical protein

NC_000907
(Haemophilus influenzae Rd KW20)

7e-70

6) siaP
( YP_005827151.1 )

Sialic acid TRAP transporter, periplasmic-binding protein SiaP

NC_017451
(Haemophilus influenzae R2866)

1e-69

7) NTHI0232
( YP_247866.1 )

sialic acid transporter, TRAP-type C4-dicarboxylate transport system, periplasmic component

NC_007146
(Haemophilus influenzae 86-028NP)

1e-69

8) siaP
( YP_008543953.1 )

sialic acid-binding periplasmic protein siaP

NC_022356
(Haemophilus influenzae KR494)

1e-69

9) siaP
( YP_005828987.1 )

Sialic acid TRAP transporter, periplasmic-binding protein SiaP

NC_017452
(Haemophilus influenzae R2846)

1e-69

10) HIB_01990
( YP_005178234.1 )

transporter

NC_016809
(Haemophilus influenzae 10810)

2e-69

11) siaP2
( YP_006398116.1 )

sialic acid-binding periplasmic protein SiaP

NC_018000
(Sinorhizobium fredii USDA 257)

9e-69

12) CGSHiEE_02555
( YP_001290339.1 )

anaerobic C4-dicarboxylate transporter

NC_009566
(Haemophilus influenzae PittEE)

4e-67

13) SM_b20295
( NP_436825.1 )

ABC transporter substrate-binding protein

NC_003078
(Sinorhizobium meliloti 1021)

6e-67

14) SM2011_b20295
( YP_007613030.1 )

Putative TRAP-type dicarboxylate transporter,periplasmic solute-binding component

NC_020560
(Sinorhizobium meliloti 2011)

6e-67

15) Smed_3836
( YP_001312581.1 )

TRAP dicarboxylate transporter subunit DctP

NC_009620
(Sinorhizobium medicae WSM419)

8e-67

16) HMPREF0946_01162
( YP_008477461.1 )

DctP family TRAP transporter solute receptor

NC_022196
(Fusobacterium sp. 3_1_36A2)

9e-67

17) SinmeB_4374
( YP_005716477.1 )

TRAP dicarboxylate transporter subunit DctP

NC_017323
(Sinorhizobium meliloti BL225C)

9e-67

18) C770_GR4pD1301
( YP_007195003.1 )

tripartite ATP-independent periplasmic transporter solute receptor, DctP family

NC_019849
(Sinorhizobium meliloti GR4)

9e-67

19) BN406_06370
( YP_006843652.1 )

ABC transporter

NC_018701
(Sinorhizobium meliloti Rm41)

9e-67

20) SM11_pD1315
( YP_005723648.1 )

putative ABC transporter

NC_017326
(Sinorhizobium meliloti SM11)

9e-67

21) NT05HA_0544
( YP_003007044.1 )

sialic acid-binding periplasmic protein SiaP

NC_012913
(Aggregatibacter aphrophilus NJ8700)

3e-66

22) FN1472
( NP_604366.1 )

N-acetylneuraminate-binding protein

NC_003454
(Fusobacterium nucleatum ATCC 25586)

9e-66

23) D7S_00406
( YP_006286087.1 )

anaerobic C4-dicarboxylate transporter

NC_017846
(Aggregatibacter actinomycetemcomitans D7S-1)

2e-65

24) ANH9381_1955
( YP_004949599.1 )

anaerobic C4-dicarboxylate transporter

NC_016513
(Aggregatibacter actinomycetemcomitans ANH9381)

6e-65

25) D11S_1584
( YP_003256168.1 )

sialic acid-binding periplasmic protein SiaP

NC_013416
(Aggregatibacter actinomycetemcomitans D11S-1)

8e-65

26) Trebr_2164
( YP_004440709.1 )

TRAP dicarboxylate transporter subunit DctP

NC_015500
(Treponema brennaborense DSM 12168)

6e-64

27) NT08PM_2046
( YP_006240906.1 )

N-acetylneuraminate-binding protein

NC_017764
(Pasteurella multocida 3480)

1e-63

28) siaP
( YP_005177883.1 )

sialic acid-binding periplasmic protein SiaP

NC_016808
(Pasteurella multocida 36950)

1e-63

29) PM1709
( NP_246648.1 )

hypothetical protein

NC_002663
(Pasteurella multocida Pm70)

1e-63

30) siaP
( YP_005364540.1 )

sialic acid-binding periplasmic protein SiaP

NC_017027
(Pasteurella multocida HN06)

2e-63

31) HSM_1112
( YP_001784442.1 )

TRAP dicarboxylate transporter subunit DctP

NC_010519
(Haemophilus somnus 2336)

5e-63

32) dctP
( YP_718913.1 )

TRAP dicarboxylate transporter, periplasmic component

NC_008309
(Haemophilus somnus 129PT)

1e-62

33) UMN179_02203
( YP_004421113.1 )

family 7 extracellular solute-binding protein

NC_015460
(Gallibacterium anatis UMN179)

4e-60

• Sequence Alignments

1) O3Y_08615 in NC_016944


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  500 bits (1887),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSNIGQPIVSKLAAM  321
            PLYKEFDSNIGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

2) dctP-1 in NC_012578


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  500 bits (1887),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSNIGQPIVSKLAAM  321
            PLYKEFDSNIGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

3) VCD_002591 in NC_012668


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  500 bits (1887),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSNIGQPIVSKLAAM  321
            PLYKEFDSNIGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

4) Vch1786_I1273 in NC_016445


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  500 bits (1887),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSNIGQPIVSKLAAM  321
            PLYKEFDSNIGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

5) VC1779 in NC_002505


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  500 bits (1887),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSNIGQPIVSKLAAM  321
            PLYKEFDSNIGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

6) dctP-1 in NC_012582


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  500 bits (1887),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSNIGQPIVSKLAAM  321
            PLYKEFDSNIGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

7) dctP-1 in NC_009457


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  500 bits (1887),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSNIGQPIVSKLAAM  321
            PLYKEFDSNIGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

8) VCLMA_A1541 in NC_017270


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  497 bits (1876),  Expect = 3e-142, Method: Compositional matrix adjust.
 Identities = 318/321 (99%), Positives = 319/321 (99%), Gaps = 0/321 (0%)

Query  1    MKTINKitiailtlsaaasVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60
            MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120
            LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180
            DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240
            SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEEELVSFFKSEGINVTYPDLGPFREAMQ  300
            STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQE ELVSFFKSEGINVTYPDL PFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYKEFDSKIGQPIVSKLAAM  321
            PLYKEFDS+IGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

9) VVMO6_04106 in NC_014966


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  465 bits (1752),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 262/321 (82%), Positives = 303/321 (95%), Gaps = 0/321 (0%)

Query  1    MKTMNRITLAMLTVGLSLSSNAATTLKMGMQASVGSVEYTSAKLLADTVEEMSKGELKLA  60
            MKT+N+IT+A+LT++ + S NAATTLKMGMQASVGSVEY SAK+LADT+EEMS+GE+KLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  61   LYPSAQLGDDRAMLQQLSMGDLDITYAEFGRMGLWIPRAEAVTLPYVARDYDHLRRMFDS  120
            LYPSAQLGDDRAMLQQL++GDLDITYAEFGRMGLWIPRAEAV LPYVA+D+DHLRRMF+S
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  121  EFGQGIRQEMLTKFNWRALDTWYNGTRETTSNRPLKSISDFKGLKLRVPNAKPNLNYAKL  180
            +FGQG+R+EML KFNWRALDTWYNGTRETTSNRPL+SI DFKGLKLRVPNAK NLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  181  SGASPTPMAFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQSNLAITNHIVNDQMVLISE  240
            SGASPTPM+FSEVYLALQTNAVDGQENPLPTIKTMKFYEVQ NLA+T+HIVNDQMV+ISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  241  STWQKLSEQEREIVANAVKQTGEAHTASVKKQEAELISFFEAQGVNVTYPELAPFREAMQ  300
            STWQKLS+ +++I+ +AV++ G+AHT +VK QEAEL+SFF ++G+NVTYP+L PFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  301  PLYSEFEKKIGQPIVSKLAAM  321
            PLY EF+ +IGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

10) VVA1202 in NC_005140


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  465 bits (1753),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 262/321 (82%), Positives = 303/321 (95%), Gaps = 0/321 (0%)

Query  11   MKTMNRITLAMLTVGLSLSANAATTLKMGMQASVGSVEYTSAKLLADTVEEMSKGELKLA  70
            MKT+N+IT+A+LT++ + S NAATTLKMGMQASVGSVEY SAK+LADT+EEMS+GE+KLA
Sbjct  1    MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA  60

Query  71   LYPSAQLGDDRAMLQQLSMGDLDITYAEFGRMGLWIPRAEAVTLPYVARDYDHLRRMFDS  130
            LYPSAQLGDDRAMLQQL++GDLDITYAEFGRMGLWIPRAEAV LPYVA+D+DHLRRMF+S
Sbjct  61   LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES  120

Query  131  EFGQGIRQEMLTKFNWRALDTWYNGTRETTSNRPLKSISDFKGLKLRVPNAKPNLNYAKL  190
            +FGQG+R+EML KFNWRALDTWYNGTRETTSNRPL+SI DFKGLKLRVPNAK NLNYAKL
Sbjct  121  DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL  180

Query  191  SGASPTPMAFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQSNLAITNHIVNDQMVLISE  250
            SGASPTPM+FSEVYLALQTNAVDGQENPLPTIKTMKFYEVQ NLA+T+HIVNDQMV+ISE
Sbjct  181  SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE  240

Query  251  STWQKLSEQEREIVANAVKQTGEAHTASVKKQEAELISFFEAQGVNVTYPELAPFREAMQ  310
            STWQKLS+ +++I+ +AV++ G+AHT +VK QEAEL+SFF ++G+NVTYP+L PFREAMQ
Sbjct  241  STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ  300

Query  311  PLYSEFEKKIGQPIVSKLAAM  331
            PLY EF+ +IGQPIVSKLAAM
Sbjct  301  PLYKEFDSNIGQPIVSKLAAM  321

11) VV2_0733 in NC_004460


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  436 bits (1641),  Expect = 8e-124, Method: Compositional matrix adjust.
 Identities = 243/292 (84%), Positives = 277/292 (95%), Gaps = 0/292 (0%)

Query  1    MQASVGSVEYTSAKLLADTVEEMSKGELKLALYPSAQLGDDRAMLQQLSMGDLDITYAEF  60
            MQASVGSVEY SAK+LADT+EEMS+GE+KLALYPSAQLGDDRAMLQQL++GDLDITYAEF
Sbjct  30   MQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEF  89

Query  61   GRMGLWIPRAEAVTLPYVARDYDHLRRMFDSEFGQGIRQEMLTKFNWRALDTWYNGTRET  120
            GRMGLWIPRAEAV LPYVA+D+DHLRRMF+S+FGQG+R+EML KFNWRALDTWYNGTRET
Sbjct  90   GRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRET  149

Query  121  TSNRPLKSISDFKGLKLRVPNAKPNLNYAKLSGASPTPMAFSEVYLALQTNAVDGQENPL  180
            TSNRPL+SI DFKGLKLRVPNAK NLNYAKLSGASPTPM+FSEVYLALQTNAVDGQENPL
Sbjct  150  TSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPL  209

Query  181  PTIKTMKFYEVQSNLAITNHIVNDQMVLISESTWQKLSEQEREIVANAVKQTGEAHTASV  240
            PTIKTMKFYEVQ NLA+T+HIVNDQMV+ISESTWQKLS+ +++I+ +AV++ G+AHT +V
Sbjct  210  PTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTV  269

Query  241  KKQEAELISFFEAQGVNVTYPELAPFREAMQPLYSEFEKKIGQPIVSKLAAM  292
            K QEAEL+SFF ++G+NVTYP+L PFREAMQPLY EF+ +IGQPIVSKLAAM
Sbjct  270  KTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM  321

12) PBPRA2281 in NC_006370


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  395 bits (1486),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 223/322 (70%), Positives = 279/322 (87%), Gaps = 1/322 (0%)

Query  1    MNNINKItlsllalaltttaVQAETILKMGLQANVGSVEYDSAKILSDKISELSDGEMKL  60
            M+ INKIT+++L+L+ +++ V+A T LKMG+QA+VGSVEY+SAK+L+D + E+S+GE+KL
Sbjct  1    MKTINKITIAILTLSAAAS-VNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   LLYPGAQLGDDRAMLQQLSMGDLDITFAEFGRMGLWIPRAEAVMLPYVVKNYAHIQRIFN  120
             LYP+AQLGDDRAMLQQL++GDLDIT+AEFGRMGLWIPRAEAVMLPYV K++ H++R+F+
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SKFGQGVREEMLTNFNWRALDTWYNGTRQTSSNRPLNTISDFEGLKLRVPNAKANLAFAK  180
            S FGQGVR+EML +FNWRALDTWYNGTR+T+SNRPLN+I DF GLKLRVPNAK NL +AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  YAGASPTPMVFSEVYLALQTNAVDGQENPLPTFNTMKFYEVQPNLAMTNHIVNDQMVLIS  240
             +GASPTPM FSEVYLALQTNAVDGQENPLPT++TMKFYEVQ NLAMT+HIVNDQMV+IS
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDRWQSLSKDQQATITEAVSVAGKRHTNFVNNQEKELITFFKAEGVNITYPDLAPFREAM  300
            E  WQ LS  ++  I  AV   G  HT+ V+ QE EL++FFK+EG+N+TYPDL PFREAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  LPIYKDFDKKIGKQLVEELSDI  322
             P+YK+FD +IG+ +V  L+ +
Sbjct  300  QPLYKEFDSNIGQPIVSKLAAM  321

13) PCNPT3_01880 in NC_020802


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  387 bits (1454),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 218/315 (70%), Positives = 274/315 (87%), Gaps = 0/315 (0%)

Query  1    MKRLTVGllslafaassYAQTTLKMGLQASVGSVEYVSAKLFSDKISELSKGDMKVLLYP  60
            ++++T+++L+L+ AAS  A TTLKMG+QASVGSVEY SAK+++D + E+S+G++K+ LYP
Sbjct  4    INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYP  63

Query  61   SAQLGDDRAMLQQLTLGDLDFTYAEFGRMGLWIPRAGAVMLPYVIKDFAHIKRIFNSDFG  120
            SAQLGDDRAMLQQLTLGDLD+TYAEFGRMGLWIPRA AVMLPYV KDF H++R+F+SDFG
Sbjct  64   SAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFG  123

Query  121  LSVRDEMLNKYGWRALDTWYNGTRQTSSNRPLNNIADFKGLKLRVPNAKANLMFAKYSGA  180
             +VRDEML+K+ WRALDTWYNGTR+T+SNRPLN+I DFKGLKLRVPNAK NL +AK SGA
Sbjct  124  QGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGA  183

Query  181  SPTPMAFSEVYLALQTNAVDGQENPLPTFNTMKFYEVQKHLAITNHIVNDQMLLISNNTW  240
            SPTPM+FSEVYLALQTNAVDGQENPLPT++TMKFYEVQK+LA+T+HIVNDQM++IS++TW
Sbjct  184  SPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTW  243

Query  241  KTLSAEQQNIITKVTALVGKKHTAFVEQQEKELISFFEKEGITVSYPELQPFRDAMKPIY  300
            + LS  +++II K    VG  HT  V  QE EL+SFF  EGI V+YP+L+PFR+AM+P+Y
Sbjct  244  QKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLY  303

Query  301  VEFDKKIGSNVIEEI  315
             EFD +IG  ++  +
Sbjct  304  KEFDSNIGQPIVSKL  318

14) HIBPF19700 in NC_014920


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  257 bits (960),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 156/315 (50%), Positives = 228/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVSFFEKQGVKITHPDLVPFKE  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LVSFF  +G+++T PDL PF+E
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

15) HICON_13270 in NC_014922


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  257 bits (960),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 156/315 (50%), Positives = 228/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVSFFEKQGVKITHPDLVPFKE  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LVSFF  +G+++T PDL PF+E
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

16) CGSHiGG_03320 in NC_009567


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  257 bits (960),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 154/314 (50%), Positives = 227/314 (73%), Gaps = 2/314 (0%)

Query  1    MKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEI  60
            MK  + +  + ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I +
Sbjct  1    MKTINKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   SLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALF  120
            +LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +F
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MF  118

Query  121  DTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYA  180
            +++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL YA
Sbjct  119  ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYA  178

Query  181  KYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLV  240
            K  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ ++
Sbjct  179  KLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVII  238

Query  241  SNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKES  300
            S+ T + L++  + +++ A ++ +  HT+     E +LV+FF  +G+++T PDL PF+E+
Sbjct  239  SESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREA  298

Query  301  MKPYYAEFVKQTGQ  314
            M+P Y EF  + GQ
Sbjct  299  MQPLYKEFDSNIGQ  312

17) HI0146 in NC_000907


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  257 bits (960),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 155/315 (50%), Positives = 228/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKE  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LV+FF  +G+++T PDL PF+E
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

18) siaP in NC_017451


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  256 bits (956),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 155/315 (50%), Positives = 227/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVSFFEKQGVKITHPDLVPFKA  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LVSFF  +G+++T PDL PF+ 
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

19) NTHI0232 in NC_007146


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  256 bits (956),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 154/315 (49%), Positives = 227/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKA  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LV+FF  +G+++T PDL PF+ 
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

20) siaP in NC_022356


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  256 bits (956),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 154/315 (49%), Positives = 227/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKA  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LV+FF  +G+++T PDL PF+ 
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

21) siaP in NC_017452


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  256 bits (956),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 154/315 (49%), Positives = 227/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKA  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LV+FF  +G+++T PDL PF+ 
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

22) HIB_01990 in NC_016809


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  256 bits (955),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 154/315 (49%), Positives = 227/315 (73%), Gaps = 3/315 (0%)

Query  1    MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIE  60
            M  + K+ +A  ++L+ +++V AA   LK GM+A+ +S EY++A M+A  + E SQG I 
Sbjct  1    MKTINKITIAI-LTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK  58

Query  61   ISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKAL  120
            ++LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ +
Sbjct  59   LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-M  117

Query  121  FDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAY  180
            F+++FG+++   M + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL Y
Sbjct  118  FESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNY  177

Query  181  AKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL  240
            AK  GASPTPM+FSEVYLALQTNAVDGQENPL+++++ KFYEVQK LAMT+HI+NDQ+ +
Sbjct  178  AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI  237

Query  241  VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKA  300
            +S+ T + L++  + +++ A ++ +  HT+     E +LV+FF  +G+++T PDL PF+ 
Sbjct  238  ISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE  297

Query  301  SMKPYYAEFVKQTGQ  315
            +M+P Y EF  + GQ
Sbjct  298  AMQPLYKEFDSNIGQ  312

23) siaP2 in NC_018000


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  253 bits (946),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 140/319 (44%), Positives = 225/319 (71%), Gaps = 1/319 (0%)

Query  1    MKTGLISLALAGLLMASQASAQETRTLRLGMQGTAGDPQFEGVTEAARIIKEKSSGRLTL  60
            MKT +  +++A L +++ AS + + TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFSEMMEQVTLGELDFTLNPFGGMDAWVPRAVVASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVEEMRTEHKWRTVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ +EM    +WR++D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQLILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALEPADQQVVMEAFEAGGVLNNKLVNEKEASLVSAFRERDITVVEPDKAAFREAM  300
            E TW+ L  +D++++  A +  G  + + V+ +EA LVS F+  +I V  PD  +FREAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGAGTVQTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

24) CGSHiEE_02555 in NC_009566


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (924),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 144/284 (51%), Positives = 208/284 (74%), Gaps = 1/284 (0%)

Query  1    MNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAES  60
            M+A+ +S EY++A M+A  + E SQG I ++LYPS+QLGDDRAML+QL  G LD+T+AE 
Sbjct  30   MQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEF  89

Query  61   ARFQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQ  120
            +R  L  P A    LPYV  +++  ++ +F+++FG+++   M + +    L   YNGTR+
Sbjct  90   GRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESDFGQGVRDEMLQKFNWRALDTWYNGTRE  148

Query  121  TTSNRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENP  180
            TTSNR++NSI D KGLKLRVPNA  NL YAK  GASPTPM+FSEVYLALQTNAVDGQENP
Sbjct  149  TTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENP  208

Query  181  LAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKL  240
            L+++++ KFYEVQK LAMT+HI+NDQ+ ++S+ T + L++  + +++ A ++ +  HT+ 
Sbjct  209  LPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQT  268

Query  241  FVDGEKDLVTFFEKQGVKITHPDLVPFKASMKPYYAEFVKQTGQ  284
                E +LV+FF  +G+++T PDL PF+ +M+P Y EF  + GQ
Sbjct  269  VKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQ  312

25) SM_b20295 in NC_003078


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (923),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 141/319 (45%), Positives = 222/319 (70%), Gaps = 1/319 (0%)

Query  1    MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL  60
            MKT +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ DEM    +WR +D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALEPADQKVVMEAFEAGGALNDKLVSDKEANLVSDFRERGITVVEPDKAAFQEAM  300
            E TW+ L  +D+ ++  A +  G  + + V  +EA+LVS F+  GI V  PD  +F+EAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGADTVKTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

26) SM2011_b20295 in NC_020560


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (923),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 141/319 (45%), Positives = 222/319 (70%), Gaps = 1/319 (0%)

Query  1    MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL  60
            MKT +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ DEM    +WR +D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALEPADQKVVMEAFEAGGALNDKLVSDKEANLVSDFRERGITVVEPDKAAFQEAM  300
            E TW+ L  +D+ ++  A +  G  + + V  +EA+LVS F+  GI V  PD  +F+EAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGADTVKTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

27) Smed_3836 in NC_009620


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (921),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 137/317 (44%), Positives = 219/317 (70%), Gaps = 0/317 (0%)

Query  3    KGLISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTLEI  62
            K +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L +
Sbjct  2    KTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLAL  61

Query  63   FPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFEHLQKIIASD  122
            +P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DF+HL++++ SD
Sbjct  62   YPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESD  121

Query  123  WGKGIVDELRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFNGMKLRVPNSAPLLTWAKAM  182
             G+G+ DE+    +WR +D+WY GTR+TT+++P++   DF+G+KLRVPN+   L  AK  
Sbjct  122  FGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLS  181

Query  183  GASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQTHVSLTGHLVQDQVVLMSED  242
            GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ+V++SE 
Sbjct  182  GASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISES  241

Query  243  TWNALDPSDQKLVMEAFEAGGALNDKLVANKETSLVSDFRERGITVVEPDKAAFQEAMKP  302
            TW+ L  +D+ ++  A +  G  + + V  +E+ LVS F+  GI V  PD  +F+EAM+P
Sbjct  242  TWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQP  301

Query  303  VYADLDARFGAGTVQTL  319
            +Y ++D+ +G   V  L
Sbjct  302  LYKEFDSNIGQPIVSKL  318

28) HMPREF0946_01162 in NC_022196


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (921),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 150/326 (47%), Positives = 231/326 (71%), Gaps = 5/326 (1%)

Query  1    MKKTSLLKVAILFGVMTTSAFAAKYNLKMGMTAGTSQNEYKAAEVFAKELKKRSNGEIEL  60
            MK  + + +AIL  + ++++  A   LKMGM A+ +  EY++A ++A  L   S+GEI L
Sbjct  1    MKTINKITIAIL-TLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   KLYPNAQLGKDDLAMMQQLEGGALDFTFAETGRFSTFFPEAEVYTLPYMIKDFNHMKKAV  120
             LYP+AQLG DD AM+QQL  G LD+T+AE GR +  +P AE   LPY+ KDF+H+++  
Sbjct  60   ALYPSAQLG-DDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMF  118

Query  121  NTKFGKDLFKKVHDKKGMTVLAQAYNGTRQTTSNKAIKSLSDMKGMKLRVPSAAANLAFA  180
            ++ FG+++   + +K     L   YNGTR+TTSN++++S+ D KG+KLRVP+A  NL +A
Sbjct  119  ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYA  178

Query  181  KYTGASPTPMAFSEVYLALQTNAVDGQENPLSTIKAQKFYEVQKYLAMTNHILNDQLYLV  240
            K +GASPTPM+FSEVYLALQTNAVDGQENPL+TIK+ KFYEVQK LAMT+HI+NDQ+ ++
Sbjct  179  KLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVII  238

Query  241  SNITMEELPENLQKVVKESAEVAAEYHTKLFMDEEKSLKNFFKSKGVTITEPNLADFKKA  300
            S+ T + L++  + +++ + +  ++ HT+    +E  L +FFKS G+ +T P+L  F+ A
Sbjct  239  SESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREA  298

Query  301  MKPFYDEYTKKNGKVGEDAIKAIEAV  326
            M+P+Y E+   ++++G+  +  + A+
Sbjct  299  MQPLYKEF---DSNIGQPIVSKLAAM  321

29) Sinme_3877 in NC_015596


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (921),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 141/319 (45%), Positives = 221/319 (70%), Gaps = 1/319 (0%)

Query  1    MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL  60
            MKT +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVDEMRAEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ DEM    +WR +D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALEPADQKVVMEAFEAGGTLNDKLVTDKEASLVSDFRERGITVVEPDKAAFQEAM  300
            E TW+ L  +D+ ++  A +  G  + + V  +EA LVS F+  GI V  PD  +F+EAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGADTVKTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

30) SinmeB_4374 in NC_017323


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (921),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 141/319 (45%), Positives = 221/319 (70%), Gaps = 1/319 (0%)

Query  1    MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL  60
            MKT +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ DEM    +WR +D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALEPADQKVVMEAFEAGGALNDKLVTDKEASLVSDFRERGITVVEPDKAAFQEAM  300
            E TW+ L  +D+ ++  A +  G  + + V  +EA LVS F+  GI V  PD  +F+EAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGADTVKTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

31) C770_GR4pD1301 in NC_019849


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  247 bits (921),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 141/319 (45%), Positives = 221/319 (70%), Gaps = 1/319 (0%)

Query  1    MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL  60
            MKT +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ DEM    +WR +D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALEPADQKVVMEAFEAGGALNDKLVTDKEASLVSDFRERGITVVEPDKAAFQEAM  300
            E TW+ L  +D+ ++  A +  G  + + V  +EA LVS F+  GI V  PD  +F+EAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGADTVKTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

32) BN406_06370 in NC_018701


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  246 bits (920),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 141/319 (45%), Positives = 221/319 (70%), Gaps = 1/319 (0%)

Query  1    MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL  60
            MKT +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ DEM    +WR +D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALKPADQKVVMEAFEAGGALNDKLVTDKEASLVSDFRERGITVVEPDKAAFQEAM  300
            E TW+ L  +D+ ++  A +  G  + + V  +EA LVS F+  GI V  PD  +F+EAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGADTVKTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

33) SM11_pD1315 in NC_017326


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  246 bits (920),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 141/319 (45%), Positives = 221/319 (70%), Gaps = 1/319 (0%)

Query  1    MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL  60
            MKT +  +++A L +++ A  + A TL++GMQ++ G  ++++    A  + E S G + L
Sbjct  1    MKT-INKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA  120
             ++P++QLG    M++Q+TLG+LD+T   FG M+ W+PRA     +YV  DFDHL++++ 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFE  119

Query  121  SDWGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAK  180
            SD G+G+ DEM    +WR +D+WY GTR+TT+++P++   DF G+KLRVPN+   L  AK
Sbjct  120  SDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAK  179

Query  181  AMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS  240
              GASPTP++F+EVYLALQTN VDGQENPLP I +MKF EVQ ++++T H+V+DQ++++S
Sbjct  180  LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIIS  239

Query  241  EDTWNALKPADQKVVMEAFEAGGALNDKLVTDKEASLVSDFRERGITVVEPDKAAFQEAM  300
            E TW+ L  +D+ ++  A +  G  + + V  +EA LVS F+  GI V  PD  +F+EAM
Sbjct  240  ESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAM  299

Query  301  KPVYADLDAKFGADTVKTL  319
            +P+Y ++D+++G   V  L
Sbjct  300  QPLYKEFDSNIGQPIVSKL  318

34) NT05HA_0544 in NC_012913


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  245 bits (914),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 153/313 (49%), Positives = 224/313 (72%), Gaps = 2/313 (0%)

Query  1    MKLAKLFLATAIALGVTSVANAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSNGKIEI  60
            MK  + +  + ++L+ ++  NAA   LK GM+A+ +S EY++A M+A  + E S+G I +
Sbjct  1    MKTINKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   SLYPSSQLGDDRAMLKQLKDGALDFTFAESARFQLFYPEAAVFALPYVITDYNVAQKALF  120
            +LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  D++  ++ +F
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MF  118

Query  121  DTAFGKDLIQKMNKDLGLTLLSQAYNGTRQTTSNRAIKSIADMKGLKLRVPNAATNLAYA  180
            ++ FG+++ + M + +    L   YNGTR+TTSNR+++SI D KGLKLRVPNA  NL YA
Sbjct  119  ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYA  178

Query  181  KYVGASPTPMAFSEVYLALQTNSVDGQENPLATVQAQKFYEVQKYLAMTNHILNDQLYLV  240
            K  GASPTPM+FSEVYLALQTN+VDGQENPL+T+++ KFYEVQK LAMT+HI+NDQ+ ++
Sbjct  179  KLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVII  238

Query  241  SNETFADLPEDLqkvvkdaaqkaaEYHSKLFFDGEKELIAFFEKQGVTVTHPDLIPFKEA  300
            S+ T   L++  + +++ A QK ++ H++     E EL++FF  +G+ VT PDL PF+EA
Sbjct  239  SESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREA  298

Query  301  MKSYYADFVKQTG  313
            M++ Y +F  + G
Sbjct  299  MQPLYKEFDSNIG  311

35) FN1472 in NC_003454


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  243 bits (908),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 144/318 (46%), Positives = 224/318 (71%), Gaps = 4/318 (1%)

Query  9    AVILFGVMTTSAFAAKYNLKMGMTAGTSQNEYKAAEVFAKELKKRSNGEIELKLYPNAQL  68
            ++ ++ + ++++  A   LKMGM A+ +  EY++A ++A  L   S+GEI L LYP+AQL
Sbjct  8    TIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQL  67

Query  69   GKDDLAMMQQLEGGALDFTFAETGRFSTFFPEAEVFTLPYMIKDFNHMKKAVNTKFGKDL  128
            G DD AM+QQL  G LD+T+AE GR +  +P AE   LPY+ KDF+H+++  ++ FG+++
Sbjct  68   G-DDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGV  126

Query  129  FKKVHDKKGMTVLAQAYNGTRQTTSNKAIKSLADMKGMKLRVPGAAANLAYAKYTEAAPT  188
               + +K     L   YNGTR+TTSN++++S+ D KG+KLRVP A  NL YAK + A+PT
Sbjct  127  RDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPT  186

Query  189  PMAFSEVYLALQTNAVDGQENPLSTIKAQKFYEVQKYLAMTNHILNDQLYLVSNITMEEL  248
            PM+FSEVYLALQTNAVDGQENPL+TIK+ KFYEVQK LAMT+HI+NDQ+ ++S+ T + L
Sbjct  187  PMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKL  246

Query  249  PENLQKVVKESAEVAAEYHTKLFMDEEKSLKDFFKSKGVTITEPNLVDFKKAMKPFYDEY  308
            ++  + +++ + +  ++ HT+    +E  L  FFKS G+ +T P+L  F+ AM+P+Y E+
Sbjct  247  SDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEF  306

Query  309  IKKNGKVGENAIKAIEAV  326
               ++++G+  +  + A+
Sbjct  307  ---DSNIGQPIVSKLAAM  321

36) D7S_00406 in NC_017846


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 154/313 (50%), Positives = 222/313 (71%), Gaps = 2/313 (0%)

Query  1    MKLAKLFLATAMVLGVTSVANAAEYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSNGKIEI  60
            MK  + +  + + L+ ++  NAA   LK GM+A+ +S EY++A M+A  + E S+G I +
Sbjct  1    MKTINKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   SLYPSSQLGDDRAMLKQLKDGALDFTFAESARFQLFYPEAAVFALPYVITNYEVAQKALH  120
            +LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ + 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MF  118

Query  121  DTAFGKDLIQKMNKELGLTLLSQAYNGTRQTTSNRAINGIADMKGLKLRVPNAATNLAYA  180
            ++ FG+++ + M + +    L   YNGTR+TTSNR++N+I D KGLKLRVPNA  NL YA
Sbjct  119  ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYA  178

Query  181  KYVGASPTPMAFSEVYLALQTNSVDGQENPLATVQAQKFYEVQKYLAITNHILNDQLYLV  240
            K  GASPTPM+FSEVYLALQTN+VDGQENPL+T+++ KFYEVQK LA+T+HI+NDQ+ ++
Sbjct  179  KLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVII  238

Query  241  SSETFADLPEDLqkvvkkaaqkaaEYHTKLFVDGEKELVTFFEKQGVTVTHPDLTPFKDA  300
            S  T   L++  + +++KA QK ++ HT+     E ELV+FF  +G+ VT PDL PF++A
Sbjct  239  SESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREA  298

Query  301  MKPYYAEFVKQTG  313
            M+P Y EF  + G
Sbjct  299  MQPLYKEFDSNIG  311

37) ANH9381_1955 in NC_016513


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  241 bits (898),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 153/313 (49%), Positives = 222/313 (71%), Gaps = 2/313 (0%)

Query  1    MKLAKLFLATAIALGVTSVANAAEYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSNGKIEI  60
            MK  + +  + ++L+ ++  NAA   LK GM+A+ +S EY++A M+A  + E S+G I +
Sbjct  1    MKTINKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKL  59

Query  61   SLYPSSQLGDDRAMLKQLKDGALDFTFAESARFQLFYPEAAVFALPYVITNYEVAQKALH  120
            +LYPS+QLGDDRAML+QL  G LD+T+AE +R  L  P A    LPYV  +++  ++ + 
Sbjct  60   ALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MF  118

Query  121  DTAFGKDLIQKMNKELGLTLLSQAYNGTRQTTSNRAINGIADMKGLKLRVPNAATNLAYA  180
            ++ FG+++ + M + +    L   YNGTR+TTSNR++N+I D KGLKLRVPNA  NL YA
Sbjct  119  ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYA  178

Query  181  KYVGASPTPMAFSEVYLALQTNSVDGQENPLATVQAQKFYEVQKYLAITNHILNDQLYLV  240
            K  GASPTPM+FSEVYLALQTN+VDGQENPL+T+++ KFYEVQK LA+T+HI+NDQ+ ++
Sbjct  179  KLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVII  238

Query  241  SSETFADLPEDLqkvvkeaaqkaaeYHTKLFVDGEKELVTFFEKQGVTVTHPDLTPFKDA  300
            S  T   L++  + +++ A QK ++ HT+     E ELV+FF  +G+ VT PDL PF++A
Sbjct  239  SESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREA  298

Query  301  MKPYYAEFVKQTG  313
            M+P Y EF  + G
Sbjct  299  MQPLYKEFDSNIG  311

38) D11S_1584 in NC_013416


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  240 bits (896),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 151/304 (50%), Positives = 216/304 (72%), Gaps = 2/304 (0%)

Query  10   TAMVLGVASIANAAEYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSNGKIEISLYPSSQLG  69
            + + L+ A+  NAA   LK GM+A+ +S EY++A M+A  + E S+G I ++LYPS+QLG
Sbjct  10   AILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLG  68

Query  70   DDRAMLKQLKDGALDFTFAESARFQLFYPETAVFALPYVITNYEVAQKALHDTAFGKDLI  129
            DDRAML+QL  G LD+T+AE +R  L  P +    LPYV  +++  ++ + ++ FG+++ 
Sbjct  69   DDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESDFGQGVR  127

Query  130  QKMNKELGLTLLSQAYNGTRQTTSNRAINGIADMKGLKLRVPNAATNLAYAKYVGASPTP  189
            + M + +    L   YNGTR+TTSNR++N+I D KGLKLRVPNA  NL YAK  GASPTP
Sbjct  128  DEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTP  187

Query  190  MAFSEVYLALQTNSVDGQENPLATVQAQKFYEVQKYLAITNHILNDQLYLVSSETFADLP  249
            M+FSEVYLALQTN+VDGQENPL+T+++ KFYEVQK LA+T+HI+NDQ+ ++S  T   L+
Sbjct  188  MSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLS  247

Query  250  EDLqkavkeaaqkaaeYHTKLFVDGEKELVTFFEKQGVTVTHPDLTPFKDAMKPYYAEFI  309
            +  +  ++ A QK ++ HT+     E ELV+FF  +G+ VT PDL PF++AM+P Y EF 
Sbjct  248  DTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFD  307

Query  310  KQTG  313
             + G
Sbjct  308  SNIG  311

39) Trebr_2164 in NC_015500


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  237 bits (885),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 149/303 (50%), Positives = 222/303 (74%), Gaps = 1/303 (0%)

Query  25   AGTEKTVTLKLGFQANTSSkeyeaaqkfaeeakaLSGGTVNVQIFAGGQLGDDRSMLEQV  84
            A+ + + TLK+G QA+ +S EY++A+ +A+    +S G +++ +++++QLGDDR+ML+Q+
Sbjct  18   ASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQL  77

Query  85   AAGALDLVYAETGRFGLWIEEAEIFSYPFAFNDFAHLERTLASDYGKSLHAKFLEK-GWR  143
            + G LD+ YAE GR GLWI  AE    P+  +DF HL R + SD+G++++   L+K  WR
Sbjct  78   TLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWR  137

Query  144  ILATGYNGTRQTTSNRPINSIADMKGMKLRVPNAAANLNFAKYAGAAPTPMAFAEVYLAL  203
             L T YNGTR+TTSNRP+NSI D KG+KLRVPNA  NLN+AK +GA+PTPM+F+EVYLAL
Sbjct  138  ALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLAL  197

Query  204  KTNAVDGQENPLSTIDVQKFYEVQKYCALTGHILNDNNIVMSEIIYKKLSDHQkeavtea  263
            +TNAVDGQENPL+TI   KFYEVQK  A+T HI+ND+ +++SE   +KLSD +K+ +  A
Sbjct  198  QTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKA  257

Query  264  akraaaYQTELFTADESRLIEVFKANGMTVTAPDKAPFRAACQPMYDEYTAKYGSAAVNA  323
             ++ +  +T+   ++E+ L+  FK++G+ VT PD  PFR A QP+Y E+ ++ G + V+ 
Sbjct  258  VQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSK  317

Query  324  INA  326
            + A
Sbjct  318  LAA  320

40) NT08PM_2046 in NC_017764


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 154/323 (48%), Positives = 229/323 (71%), Gaps = 5/323 (1%)

Query  3    FKKLLLASLCLGVSASVFAADYDLKFGMVAGPSSNEYKAVEFFAKEVKEKSNGKIDVAIF  62
            ++K+ +A L L+ +ASV AA   LK GM A+ +S EY++   +A  + E S+G I +A++
Sbjct  4    INKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALY  62

Query  63   PSSQLGDDRVMIKQLKDGALDFTLGESARFQIYFPEAEVFALPYMIPNFETSKKALLDTK  122
            PS+QLGDDR M++QL  G LD+T +E +R  + +P AE   LPY+  +F+  ++ ++++ 
Sbjct  63   PSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESD  121

Query  123  FGQGLLKKIDKELNVQVLSVAYNGTRQTTSNRAINSIEDMKGLKLRVPNAATNLAYAKYV  182
            FGQG+   + + +N + L   YNGTR+TTSNR++NSIED KGLKLRVPNA  NL YAK  
Sbjct  122  FGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLS  181

Query  183  GAAPTPMAFSEVYLALQTNSVDGQENPLPTIQAQKFYEVQKYLALTNHILNDQLYLISND  242
            GA+PTPM+FSEVYLALQTN+VDGQENPLPTI++ KFYEVQK LA+T+HI+NDQ+ +IS+ 
Sbjct  182  GASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISES  241

Query  243  TLADLPEDLQkvvkdaaakaaEYHTKLFVDGENSLVEFFKSQGVTVTQPDLKPFKAALTP  302
            T   L++  + +++ A  K ++ HT+     E  LV FFKS+G+ VT PDL PF+ A+ P
Sbjct  242  TWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQP  301

Query  303  YYDEYLKKNGEVGKMAIEEISNL  325
             Y E+   ++++G+  +  ++ +
Sbjct  302  LYKEF---DSNIGQPIVSKLAAM  321

41) siaP in NC_016808


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 154/323 (48%), Positives = 229/323 (71%), Gaps = 5/323 (1%)

Query  3    FKKLLLASLCLGVSASVFAADYDLKFGMVAGPSSNEYKAVEFFAKEVKEKSNGKIDVAIF  62
            ++K+ +A L L+ +ASV AA   LK GM A+ +S EY++   +A  + E S+G I +A++
Sbjct  4    INKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALY  62

Query  63   PSSQLGDDRVMIKQLKDGALDFTLGESARFQIYFPEAEVFALPYMIPNFETSKKALLDTK  122
            PS+QLGDDR M++QL  G LD+T +E +R  + +P AE   LPY+  +F+  ++ ++++ 
Sbjct  63   PSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESD  121

Query  123  FGQGLLKKIDKELNVQVLSVAYNGTRQTTSNRAINSIEDMKGLKLRVPNAATNLAYAKYV  182
            FGQG+   + + +N + L   YNGTR+TTSNR++NSIED KGLKLRVPNA  NL YAK  
Sbjct  122  FGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLS  181

Query  183  GAAPTPMAFSEVYLALQTNSVDGQENPLPTIQAQKFYEVQKYLALTNHILNDQLYLISND  242
            GA+PTPM+FSEVYLALQTN+VDGQENPLPTI++ KFYEVQK LA+T+HI+NDQ+ +IS+ 
Sbjct  182  GASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISES  241

Query  243  TLADLPEDLQkvvkdaavkaaEYHTKLFVDGENSLVEFFKSQGVTVTQPDLKPFKAALTP  302
            T   L++  + +++ A  K ++ HT+     E  LV FFKS+G+ VT PDL PF+ A+ P
Sbjct  242  TWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQP  301

Query  303  YYDEYLKKNGEVGKMAIEEISNL  325
             Y E+   ++++G+  +  ++ +
Sbjct  302  LYKEF---DSNIGQPIVSKLAAM  321

42) PM1709 in NC_002663


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 154/323 (48%), Positives = 229/323 (71%), Gaps = 5/323 (1%)

Query  3    FKKLLLASLCLGVSASVFAADYDLKFGMVAGPSSNEYKAVEFFAKEVKEKSNGKIDVAIF  62
            ++K+ +A L L+ +ASV AA   LK GM A+ +S EY++   +A  + E S+G I +A++
Sbjct  4    INKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALY  62

Query  63   PSSQLGDDRVMIKQLKDGALDFTLGESARFQIYFPEAEVFALPYMIPNFETSKKALLDTK  122
            PS+QLGDDR M++QL  G LD+T +E +R  + +P AE   LPY+  +F+  ++ ++++ 
Sbjct  63   PSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESD  121

Query  123  FGQGLLKKIDKELNVQVLSVAYNGTRQTTSNRAINSIEDMKGLKLRVPNAATNLAYAKYV  182
            FGQG+   + + +N + L   YNGTR+TTSNR++NSIED KGLKLRVPNA  NL YAK  
Sbjct  122  FGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLS  181

Query  183  GAAPTPMAFSEVYLALQTNSVDGQENPLPTIQAQKFYEVQKYLALTNHILNDQLYLISND  242
            GA+PTPM+FSEVYLALQTN+VDGQENPLPTI++ KFYEVQK LA+T+HI+NDQ+ +IS+ 
Sbjct  182  GASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISES  241

Query  243  TLADLPEDLQkvvkdaaakaaEYHTKLFVDGENSLVEFFKSQGVTVTQPDLKPFKAALTP  302
            T   L++  + +++ A  K ++ HT+     E  LV FFKS+G+ VT PDL PF+ A+ P
Sbjct  242  TWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQP  301

Query  303  YYDEYLKKNGEVGKMAIEEISNL  325
             Y E+   ++++G+  +  ++ +
Sbjct  302  LYKEF---DSNIGQPIVSKLAAM  321

43) siaP in NC_017027


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  235 bits (878),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 154/323 (48%), Positives = 228/323 (71%), Gaps = 5/323 (1%)

Query  3    FKKLLLASLCLGVSASVFAADYDLKFGMVAGPSSNEYKAVEFFAKEVKEKSNGKIDVAIF  62
            ++K+ +A L L+ +ASV AA   LK GM A+ +S EY++   +A  + E S+G I +A++
Sbjct  4    INKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALY  62

Query  63   PSSQLGDDRVMIKQLKDGALDFTLGESARFQIYFPEAEVFALPYMIPNFETSKKALLDTK  122
            PS+QLGDDR M++QL  G LD+T +E +R  + +P AE   LPY+  +F+  ++ ++++ 
Sbjct  63   PSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESD  121

Query  123  FGQGLLKKIDKELNVQVLSVAYNGTRQTTSNRAINSIEDMKGLKLRVPNAATNLAYAKYV  182
            FGQG+   + + +N + L   YNGTR+TTSNR++NSIED KGLKLRVPNA  NL YAK  
Sbjct  122  FGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLS  181

Query  183  GAAPTPMVFSEVYLALQTNSVDGQENPLPTIQAQKFYEVQKYLALTNHILNDQLYLISND  242
            GA+PTPM FSEVYLALQTN+VDGQENPLPTI++ KFYEVQK LA+T+HI+NDQ+ +IS+ 
Sbjct  182  GASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISES  241

Query  243  TLADLPEDLQkvvkdaaakaaEYHTKLFVDGENSLVEFFKSQGVTVTQPDLKPFKAALTP  302
            T   L++  + +++ A  K ++ HT+     E  LV FFKS+G+ VT PDL PF+ A+ P
Sbjct  242  TWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQP  301

Query  303  YYDEYLKKNGEVGKMAIEEISNL  325
             Y E+   ++++G+  +  ++ +
Sbjct  302  LYKEF---DSNIGQPIVSKLAAM  321

44) HSM_1112 in NC_010519


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  234 bits (873),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 144/300 (48%), Positives = 218/300 (73%), Gaps = 4/300 (1%)

Query  26   LKFGMVAGTSSNEYKAVEFFAKEVKEKSDGKIEIAIFPSAQLGDDRTMLKQLKDGSLDFT  85
            LK GM A+ +S EY++   +A  + E S+G I +A++PSAQLGDDR+ML+QL  G LD+T
Sbjct  26   LKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDIT  85

Query  86   LGETARFQIFFPEAEVFALPYMLPNFEISKKALLETNFGKGLVQKINKELNLELLSVAYN  145
             +E +R  + +P AE   LPY+  +F+  ++ ++E++FG+G+ + + + +N   L   YN
Sbjct  86   YAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESDFGQGVRDEMLQKFNWRALDTWYN  144

Query  146  GTRQTTSNRAINSIADMKGLKLRVPNAATNLAFAKYVGASPTPMAFSEVYLALQTNAVDG  205
            GTR+TTSNR++NSI D KGLKLRVPNA  NL +AK  GASPTPM+FSEVYLALQTNAVDG
Sbjct  145  GTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDG  204

Query  206  QENPLPTVQAQKFYEVQKYLALTNHILNDQLYLASRETLEDLPEDLQKVVKeaaenaaeY  265
            QENPLPT+++ KFYEVQK LA+T+HI+NDQ+ + S  T + L++  + +++ A ++ ++ 
Sbjct  205  QENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDA  264

Query  266  HTKLFKEGEKNLVAFFKEKGVTVTTPDVKPFRDALKPYYDEYLNKNGALGKQAIEEISTL  325
            HT+  K  E +LV+FFK  G+ VT PD+ PFR+A++P Y E+   ++ +G+  +  ++++
Sbjct  265  HTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEF---DSNIGQPIVSKLAAM  321

45) dctP in NC_008309


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  233 bits (869),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 144/300 (48%), Positives = 217/300 (73%), Gaps = 4/300 (1%)

Query  48   LKFGMVAGTSSNEYKAVEFFAKEVKEKSGGKIEIAIFPSAQLGDDRTMLKQLKDGSLDFT  107
            LK GM A+ +S EY++   +A  + E S G I +A++PSAQLGDDR+ML+QL  G LD+T
Sbjct  26   LKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDIT  85

Query  108  LGETARFQIFFPEAEVFALPYMLPNFEISKKALLETNFGKGLIQKINKELNLELLSVAYN  167
             +E +R  + +P AE   LPY+  +F+  ++ ++E++FG+G+ + + + +N   L   YN
Sbjct  86   YAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESDFGQGVRDEMLQKFNWRALDTWYN  144

Query  168  GTRQTTSNRAINSIADMKGLKLRVPNAATNLAFAKYVGASPTPMAFSEVYLALQTNAVDG  227
            GTR+TTSNR++NSI D KGLKLRVPNA  NL +AK  GASPTPM+FSEVYLALQTNAVDG
Sbjct  145  GTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDG  204

Query  228  QENPLPTVQAQKFYEVQKYLALTNHILNDQLYLASRETLEDLPEDLQKVVKeaaenaaeY  287
            QENPLPT+++ KFYEVQK LA+T+HI+NDQ+ + S  T + L++  + +++ A ++ ++ 
Sbjct  205  QENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDA  264

Query  288  HTKLFKEGEKNLVAFFKEKGVTVTTPDVKPFRDALKPYYDEYLNKNGALGKQAIEEISTL  347
            HT+  K  E +LV+FFK  G+ VT PD+ PFR+A++P Y E+   ++ +G+  +  ++++
Sbjct  265  HTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEF---DSNIGQPIVSKLAAM  321

46) UMN179_02203 in NC_015460


> NC_009457_P3|23|G22|147673037|YP_001217320.1|Vibrio_cholerae_O395|-|37513..38478|dctP-1|VC0395_A1377|C4-dicarboxylate-binding 
periplasmic protein
Length=321

 Score =  224 bits (836),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 151/323 (47%), Positives = 229/323 (71%), Gaps = 5/323 (1%)

Query  3    FNKLLLATLCMGLSATAFSAEYDLKMGLVAGPTSNEYkaaeffakevkaNSNGKIEISLY  62
            +NK+ +A L ++ +A++ +A   LKMG+ A+  S EY++A  +A  +   S+G I ++LY
Sbjct  4    INKITIAILTLS-AAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALY  62

Query  63   PSAQLGDDRSMIKQLGDGALDFTFGESARFQLFYPSAEVFALPYMIPNFKVAKEALFDTK  122
            PSAQLGDDR+M++QL  G LD+T++E +R  L  P AE   LPY+  +F   +  +F++ 
Sbjct  63   PSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR-MFESD  121

Query  123  YGQNLVKKVHDELGITILADAYNGTRQTTSNRAINSIKDMKGLKLRVPNAATNLAYAKYS  182
            +GQ +   + + +    L   YNGTR+TTSNR++NSI D KGLKLRVPNA  NL YAK S
Sbjct  122  FGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLS  181

Query  183  GAAPTPMAFSEVYLALQTNSVDGQENPLPTIQAQKFEEVQKYLALTNHILNDQLYLVSNA  242
            GA+PTPM+FSEVYLALQTN+VDGQENPLPTI++ KF EVQK LA+T+HI+NDQ+ ++S++
Sbjct  182  GASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISES  241

Query  243  TLEDLPEDLQkvvkdaaekaadYHTKLFEDGEKNLIAYFESKGMTVTKPDLVPFKEAMKP  302
            T + L++  + +++ A +K +D HT+     E +L+++F S G+ VT PDL PF+EAM+P
Sbjct  242  TWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQP  301

Query  303  YYEEYIKKNGKEGEEAIAEINAL  325
             Y E+   +++ G+  ++ + A+
Sbjct  302  LYKEF---DSNIGQPIVSKLAAM  321