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Homologs of SSP0063 gene of NC_007350_R2

514

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SSP0063
( YP_300153.1 )

capsular polysaccharide biosynthesis protein

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

0.0

100

2) capD
( YP_002635116.1 )

putative capsular polysaccharide synthesis enzyme

NC_012121
(Staphylococcus carnosus TM300)

0.0

3) SLGD_00326
( YP_003470601.1 )

capsular polysaccharide synthesis enzyme Cap8D

NC_013893
(Staphylococcus lugdunensis HKU09-01)

0.0

4) capD
( YP_252306.1 )

capsular polysaccharide biosynthesis protein CapD

NC_007168
(Staphylococcus haemolyticus JCSC1435)

0.0

5) SAMSHR1132_01260
( YP_005324648.1 )

capsular polysaccharide synthesis enzyme

NC_016941
(Staphylococcus aureus MSHR1132)

2e-180

6) CA347_163
( YP_008127046.1 )

short chain dehydrogenase family protein

NC_021554
(Staphylococcus aureus CA-347)

3e-179

7) SAS0127
( YP_042249.1 )

capsular polysaccharide synthesis enzyme

NC_002953
(Staphylococcus aureus MSSA476)

8e-179

8) cap8D
( NP_644942.1 )

capsular polysaccharide synthesis enzyme Cap8D

NC_003923
(Staphylococcus aureus MW2)

8e-179

9) cap5D
( YP_185039.1 )

capsular polysaccharide biosynthesis protein Cap5D

NC_002951
(Staphylococcus aureus COL)

9e-179

10) SAOUHSC_00117
( YP_498717.1 )

capsular polysaccharide biosynthesis protein Cap5D

NC_007795
(Staphylococcus aureus NCTC 8325)

9e-179

11) SAVC_00530
( YP_005289707.1 )

polysaccharide biosynthesis protein CapD

NC_016912
(Staphylococcus aureus VC40)

9e-179

12) capD
( YP_001331133.1 )

polysaccharide biosynthesis protein CapD

NC_009641
(Staphylococcus aureus Newman)

1e-178

13) capD
( YP_005740902.1 )

Capsular polysaccharide synthesis enzyme Cap8D

NC_017340
(Staphylococcus aureus 04-02981)

2e-178

14) SAAG_00635
( YP_008448148.1 )

polysaccharide biosynthesis protein CapD

NC_022113
(Staphylococcus aureus 55/2053)

2e-178

15) ECTR2_109
( YP_005748862.1 )

capsular polysaccharide biosynthesis protein capD

NC_017343
(Staphylococcus aureus ECT-R 2)

2e-178

16) cap5D
( YP_003281073.1 )

capsular polysaccharide biosynthesis protein Cap5D

NC_013450
(Staphylococcus aureus ED98)

2e-178

17) SaurJH9_0138
( YP_001245521.1 )

polysaccharide biosynthesis protein CapD

NC_009487
(Staphylococcus aureus JH9)

2e-178

18) M013TW_0142
( YP_005296610.1 )

capsular polysaccharide synthesis enzyme Cap8D

NC_016928
(Staphylococcus aureus M013)

2e-178

19) capD
( YP_001440741.1 )

capsular polysaccharide synthesis enzyme Cap5D

NC_009782
(Staphylococcus aureus Mu3)

2e-178

20) capD
( NP_370676.1 )

capsular polysaccharide synthesis enzyme Cap5D

NC_002758
(Staphylococcus aureus Mu50)

2e-178

21) capD
( NP_373389.1 )

capsular polysaccharide synthesis protein Cap5D

NC_002745
(Staphylococcus aureus N315)

2e-178

22) SAPIG0166
( YP_005732976.1 )

capsular polysaccharide biosynthesis protein Cap5D

NC_017333
(Staphylococcus aureus ST398)

2e-178

23) SAT0131_00142
( YP_005751429.1 )

Polysaccharide biosynthesis protein CapD

NC_017347
(Staphylococcus aureus T0131)

2e-178

24) capD
( YP_005730185.1 )

capsular polysaccharide synthesis enzyme

NC_017331
(Staphylococcus aureus TW20)

2e-178

25) capD
( YP_006708903.1 )

capsular polysaccharide synthesis enzyme

NC_018608
(Staphylococcus aureus 08BA02176)

3e-178

26) MS7_0146
( YP_005756611.1 )

polysaccharide biosynthesis family protein

NC_017351
(Staphylococcus aureus 11819-97)

3e-178

27) capD
( YP_008484173.1 )

capsular polysaccharide synthesis enzyme CapD

NC_022222
(Staphylococcus aureus 6850)

3e-178

28) capD
( YP_008167315.1 )

Capsular polysaccharide biosynthesis protein CapD

NC_021670
(Staphylococcus aureus Bmb9393)

3e-178

29) SAOV_0099
( YP_005735617.1 )

capsular polysaccharide biosynthesis protein CapD

NC_017337
(Staphylococcus aureus ED133)

3e-178

30) cap5D
( YP_005738302.1 )

capsular polysaccharide biosynthesis protein Cap5D

NC_017338
(Staphylococcus aureus JKD6159)

3e-178

31) SaurJH1_0143
( YP_001315292.1 )

polysaccharide biosynthesis protein CapD

NC_009632
(Staphylococcus aureus JH1)

4e-178

32) SAI6T6_1001070
( YP_007582717.1 )

Polysaccharide biosynthesis protein CapD

NC_020536
(Staphylococcus aureus ST228)

4e-178

33) SAI5S5_1001060
( YP_007620431.1 )

Polysaccharide biosynthesis protein CapD

NC_020566
(Staphylococcus aureus ST228)

4e-178

34) SAI8T7_1001070
( YP_007622418.1 )

Polysaccharide biosynthesis protein CapD

NC_020568
(Staphylococcus aureus ST228)

4e-178

35) SAI1T1_2001070
( YP_007576730.1 )

Polysaccharide biosynthesis protein CapD

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

4e-178

36) SAI2T2_1001070
( YP_007618445.1 )

Polysaccharide biosynthesis protein CapD

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

4e-178

37) SAI3T3_1001070
( YP_007578738.1 )

Polysaccharide biosynthesis protein CapD

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

4e-178

38) SAI4T8_1001070
( YP_007580702.1 )

Polysaccharide biosynthesis protein CapD

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

4e-178

39) SAI7S6_1001070
( YP_007584681.1 )

Polysaccharide biosynthesis protein CapD

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

4e-178

40) ST398NM01_0166
( YP_006194313.1 )

UDP-D-quinovosamine 4-dehydrogenase

NC_017673
(Staphylococcus aureus 71193)

5e-178

41) cap5D
( YP_005743524.1 )

capsular polysaccharide biosynthesis protein Cap5D

NC_017341
(Staphylococcus aureus JKD6008)

5e-178

42) capD
( YP_005746428.1 )

polysaccharide biosynthesis protein CapD

NC_017342
(Staphylococcus aureus TCH60)

5e-178

43) capD
( YP_005754136.1 )

capsular polysaccharide synthesis enzyme

NC_017349
(Staphylococcus aureus LGA251)

6e-178

44) capD
( YP_039619.1 )

capsular polysaccharide synthesis enzyme

NC_002952
(Staphylococcus aureus MRSA252)

6e-178

45) capD
( YP_006236492.1 )

capsular polysaccharide synthesis enzyme

NC_017763
(Staphylococcus aureus HO 5096 0412)

7e-178

46) SAKOR_00132
( YP_008490316.1 )

UDP-D-quinovosamine 4-dehydrogenase

NC_022226
(Staphylococcus aureus CN1)

3e-177

47) capD
( YP_415606.1 )

capsular polysaccharide synthesis enzyme CapD

NC_007622
(Staphylococcus aureus RF122)

1e-176

48) MCCL_0670
( YP_002560073.1 )

capsular polysaccharide biosynthesis protein CapD

NC_011999
(Macrococcus caseolyticus JCSC5402)

2e-171

49) capD
( YP_008586766.1 )

capsular polysaccharide synthesis enzyme

NC_022443
(Staphylococcus aureus SA40)

2e-167

50) capD
( YP_008584232.1 )

capsular polysaccharide synthesis enzyme

NC_022442
(Staphylococcus aureus SA957)

2e-167

51) capD''
( YP_002635441.1 )

capsular polysaccharide synthesis enzyme CapD (fragment 2)

NC_012121
(Staphylococcus carnosus TM300)

3e-159

52) M493_17345
( REF_PRJNA208285:M493 )

hypothetical protein

NC_022080
(Geobacillus sp. JF8)

3e-157

53) BCAH187_A5448
( YP_002341337.1 )

caspsular polysaccharide biosynthesis protein

NC_011658
(Bacillus cereus AH187)

1e-150

54) BCN_5200
( YP_005107733.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_016771
(Bacillus cereus NC7401)

1e-150

55) YBT020_26290
( YP_005568898.1 )

caspsular polysaccharide biosynthesis protein

NC_017200
(Bacillus thuringiensis YBT-020)

2e-150

56) B1NLA3E_20955
( YP_007912428.1 )

capsular polysaccharide biosynthesis protein

NC_021171
(Bacillus sp. 1NLA3E)

9e-150

57) BCE_5395
( NP_981687.1 )

caspsular polysaccharide biosynthesis protein

NC_003909
(Bacillus cereus ATCC 10987)

1e-149

58) BCK_09000
( YP_006595909.1 )

caspsular polysaccharide biosynthesis protein

NC_018491
(Bacillus cereus FRI-35)

2e-149

59) Bsel_3052
( YP_003701099.1 )

polysaccharide biosynthesis protein CapD

NC_014219
(Bacillus selenitireducens MLS10)

1e-148

60) BC5274
( NP_834937.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_004722
(Bacillus cereus ATCC 14579 )

6e-147

61) BcerKBAB4_5070
( YP_001647844.1 )

polysaccharide biosynthesis protein CapD

NC_010184
(Bacillus weihenstephanensis KBAB4)

8e-147

62) BCO26_0342
( YP_004567787.1 )

capsular polysaccharide biosynthesis protein

NC_015634
(Bacillus coagulans 2-6)

1e-146

63) BH3718
( NP_244585.1 )

capsular polysaccharide biosynthesis

NC_002570
(Bacillus halodurans C-125)

1e-143

64) AXY_20090
( YP_006845903.1 )

polysaccharide biosynthesis protein

NC_018704
(Amphibacillus xylanus NBRC 15112)

2e-136

65) cpsD
( YP_003426273.1 )

capsular polysaccharide biosynthesis protein

NC_013791
(Bacillus pseudofirmus OF4)

4e-136

66) Theco_3184
( YP_007214237.1 )

nucleoside-diphosphate sugar epimerase

NC_019897
(Thermobacillus composti KWC4)

5e-135

67) epsC
( YP_008079750.1 )

putative UDP-sugar epimerase EpsC

NC_021362
(Bacillus licheniformis 9945A)

1e-133

68) OB2896
( NP_693818.1 )

capsular polysaccharide biosynthesis protein

NC_004193
(Oceanobacillus iheyensis HTE831)

6e-133

69) BcerKBAB4_3403
( YP_001646205.1 )

polysaccharide biosynthesis protein CapD

NC_010184
(Bacillus weihenstephanensis KBAB4)

4e-132

70) epsC
( YP_006714975.1 )

polysaccharide biosynthesis protein EpsC

NC_006322
(Bacillus licheniformis DSM 13)

1e-130

71) yveM
( YP_080780.1 )

capsular polysaccharide biosynthesis protein YveM

NC_006270
(Bacillus licheniformis DSM 13)

1e-130

72) BPUM_3081
( YP_001488295.1 )

capsular polysaccharide biosynthesis protein

NC_009848
(Bacillus pumilus SAFR-032)

2e-128

73) B1NLA3E_04360
( YP_007909147.1 )

polysaccharide biosynthesis protein CapD

NC_021171
(Bacillus sp. 1NLA3E)

1e-126

74) MC28_2861
( YP_006829682.1 )

translocation-enhancing protein TepA

NC_018693
(Bacillus thuringiensis MC28)

5e-126

75) HBHAL_1964
( YP_006179602.1 )

capsular polysaccharide biosynthesis protein

NC_017668
(Halobacillus halophilus DSM 2266)

3e-124

76) BATR1942_15095
( YP_003974872.1 )

UDP-sugar epimerase

NC_014639
(Bacillus atrophaeus 1942)

2e-123

77) SGO_2024
( YP_001451272.1 )

extracellular polysaccharide biosynthesis

NC_009785
(Streptococcus gordonii Challis)

4e-123

78) DSY3347
( YP_519580.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

1e-119

79) EHR_08910
( YP_006487593.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_018081
(Enterococcus hirae ATCC 9790)

1e-118

80) yveM
( YP_004878974.1 )

exopolysaccharide biosynthesis protein YveM

NC_016047
(Bacillus subtilis TU-B-10)

1e-118

81) epsC
( NP_391315.1 )

polysaccharide biosynthesis protein EpsC

NC_000964
(Bacillus subtilis 168)

2e-118

82) epsC
( YP_007535429.1 )

putative UDP-sugar epimerase EpsC

NC_020507
(Bacillus subtilis 6051-HGW)

2e-118

83) BSn5_08105
( YP_004205272.1 )

putative UDP-sugar epimerase

NC_014976
(Bacillus subtilis BSn5)

2e-118

84) A7A1_2654
( YP_007208061.1 )

hypothetical protein

NC_019896
(Bacillus subtilis BSP1)

2e-118

85) epsC
( YP_007428377.1 )

putative UDP-sugar epimerase

NC_020244
(Bacillus subtilis XF-1)

2e-118

86) yveM
( YP_005562745.1 )

hypothetical protein

NC_017196
(Bacillus subtilis BEST195)

2e-118

87) epsC
( YP_003867720.1 )

UDP-sugar epimerase

NC_014479
(Bacillus subtilis W23)

2e-118

88) MY9_3480
( YP_006233268.1 )

EpsC

NC_017743
(Bacillus sp. JS)

4e-118

89) Dhaf_4505
( YP_002460942.1 )

polysaccharide biosynthesis protein CapD

NC_011830
(Desulfitobacterium hafniense DCB-2)

1e-117

90) Desde_3866
( YP_006431926.1 )

nucleoside-diphosphate sugar epimerase

NC_018017
(Desulfitobacterium dehalogenans ATCC 51507)

8e-118

91) capD
( YP_001036136.1 )

Cps9E

NC_009009
(Streptococcus sanguinis SK36)

2e-117

92) yveM
( YP_005558444.1 )

exopolysaccharide biosynthesis YveM

NC_017195
(Bacillus subtilis RO-NN-1)

2e-117

93) Desor_5339
( YP_004973232.1 )

nucleoside-diphosphate sugar epimerase

NC_016584
(Desulfosporosinus orientis DSM 765)

2e-117

94) I653_16690
( YP_007664086.1 )

putative UDP-sugar epimerase

NC_020832
(subtilis subtilis BAB-1)

3e-117

95) Desdi_3238
( YP_007222028.1 )

nucleoside-diphosphate sugar epimerase

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

3e-117

96) epsC
( YP_007498751.1 )

Probable polysaccharide biosynthesis protein epsC

NC_020410
(Bacillus amyloliquefaciens UCMB5036)

3e-117

97) yveM
( YP_005131921.1 )

caspsular polysaccharide biosynthesis protein

NC_016784
(Bacillus amyloliquefaciens CAU B946)

2e-116

98) epsC
( YP_004375104.1 )

putative UDP-sugar epimerase

NC_015391
(Carnobacterium sp. 17-4)

2e-116

99) KSO_003295
( YP_007444037.1 )

caspsular polysaccharide biosynthesis protein

NC_020272
(Bacillus amyloliquefaciens IT-45)

3e-116

100) epsC
( YP_008422487.1 )

putative UDP-sugar epimerase

NC_022081
(Bacillus amyloliquefaciens UCMB5113)

4e-116

101) epsC
( YP_008414276.1 )

putative UDP-sugar epimerase

NC_022075
(Bacillus amyloliquefaciens UCMB-5033)

8e-116

102) Exig_2634
( YP_001815099.1 )

polysaccharide biosynthesis protein CapD

NC_010556
(Exiguobacterium sibiricum 255-15)

1e-115

103) epsC
( YP_005547331.1 )

UDP-sugar epimerase

NC_017190
(Bacillus amyloliquefaciens LL3)

2e-115

104) Desmer_4340
( YP_006624023.1 )

nucleoside-diphosphate sugar epimerase

NC_018515
(Desulfosporosinus meridiei DSM 13257)

4e-115

105) epsC
( YP_005543134.1 )

UDP-sugar epimerase

NC_017188
(Bacillus amyloliquefaciens TA208)

5e-115

106) epsC
( YP_005551525.1 )

UDP-sugar epimerase

NC_017191
(Bacillus amyloliquefaciens XH7)

5e-115

107) epsC
( YP_001422727.1 )

hypothetical protein

NC_009725
(Bacillus amyloliquefaciens FZB42)

6e-115

108) epsC
( YP_006330350.1 )

extracellular polysaccharide biosynthesis

NC_017912
(Bacillus amyloliquefaciens Y2)

6e-115

109) epsC
( YP_005422676.1 )

caspsular polysaccharide biosynthesis protein EpsC

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

6e-115

110) B938_16225
( YP_007187921.1 )

hypothetical protein

NC_019842
(Bacillus amyloliquefaciens AS43.3)

1e-114

111) epsC
( YP_003921883.1 )

UDP-sugar epimerase

NC_014551
(Bacillus amyloliquefaciens DSM 7)

1e-114

112) ECBG_00487
( YP_007752353.1 )

hypothetical protein

NC_020995
(Enterococcus casseliflavus EC20)

2e-114

113) Desaci_4450
( YP_006468625.1 )

putative nucleoside-diphosphate sugar epimerase

NC_018068
(Desulfosporosinus acidiphilus SJ4)

8e-114

114) STP_0902
( YP_004479022.1 )

polysaccharide biosynthesis protein

NC_015558
(Streptococcus parauberis KCTC 11537)

2e-113

115) SUB1039
( YP_002562363.1 )

polysaccharide biosynthesis protein

NC_012004
(Streptococcus uberis 0140J)

1e-112

116) epsC
( YP_006631542.1 )

UDP-sugar epimerase

NC_018520
(Bacillus subtilis QB928)

5e-113

117) Dtox_4081
( YP_003193378.1 )

polysaccharide biosynthesis protein CapD

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

6e-113

118) DHBDCA_p2687
( YP_006911699.1 )

polysaccharide biosynthesis protein CapD

NC_018866
(Dehalobacter sp. DCA)

2e-112

119) I872_09825
( YP_007924195.1 )

protein Cps9E

NC_021175
(Streptococcus oligofermentans AS 1.3089)

2e-112

120) TEH_03930
( YP_004885884.1 )

polysaccharide biosynthesis protein

NC_016052
(Tetragenococcus halophilus NBRC 12172)

3e-112

121) DCF50_p2698
( YP_006914686.1 )

polysaccharide biosynthesis protein CapD

NC_018867
(Dehalobacter sp. CF)

4e-112

122) SCIM_1578
( YP_006470478.1 )

protein Cps9E

NC_018073
(Streptococcus intermedius JTH08)

6e-110

123) SIR_1783
( YP_008513685.1 )

extracellular polysaccharide biosynthesis

NC_022246
(Streptococcus intermedius B196)

6e-110

124) Mahau_0321
( YP_004462359.1 )

polysaccharide biosynthesis protein CapD

NC_015520
(Mahella australiensis 50-1 BON)

8e-110

125) Dtox_3994
( YP_003193309.1 )

polysaccharide biosynthesis protein CapD

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

3e-109

126) Desmer_4120
( YP_006623820.1 )

nucleoside-diphosphate sugar epimerase

NC_018515
(Desulfosporosinus meridiei DSM 13257)

5e-109

127) cps9E
( YP_008362766.1 )

Cps9E

NC_021904
(Lactobacillus plantarum ZJ316)

8e-109

128) EHR_10200
( YP_006487827.1 )

extracellular polysaccharide biosynthesis

NC_018081
(Enterococcus hirae ATCC 9790)

2e-108

129) MPD5_1391
( YP_005320093.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_016938
(Melissococcus plutonius DAT561)

4e-108

130) Cthe_2334
( YP_001038729.1 )

polysaccharide biosynthesis protein CapD

NC_009012
(Clostridium thermocellum ATCC 27405)

2e-107

131) Clo1313_2997
( YP_005689426.1 )

polysaccharide biosynthesis protein CapD

NC_017304
(Clostridium thermocellum DSM 1313)

2e-107

132) MPTP_0527
( YP_004455811.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_015516
(Melissococcus plutonius ATCC 35311)

5e-107

133) K710_0836
( YP_008056550.1 )

CpsE

NC_021314
(Streptococcus iniae SF1)

6e-107

134) EFD32_1900
( YP_006538261.1 )

capsular polysaccharide biosynthesis protein

NC_018221
(Enterococcus faecalis D32)

1e-106

135) cpsE
( YP_004558979.1 )

polysaccharide biosynthesis protein

NC_015600
(Streptococcus pasteurianus ATCC 43144)

2e-106

136) SSUD12_1366
( YP_006082900.1 )

Cps9E

NC_017621
(Streptococcus suis D12)

7e-106

137) Gmet_1338
( YP_006720305.1 )

NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase

NC_007517
(Geobacter metallireducens GS-15)

1e-105

138) SSUST3_0740
( YP_004401382.1 )

hypothetical protein

NC_015433
(Streptococcus suis ST3)

9e-106

139) M7W_1029
( YP_007393722.1 )

UDP-N-acetylglucosamine 4, 6-dehydratase

NC_020207
(Enterococcus faecium NRRL B-2354)

2e-105

140) NT01CX_1779
( YP_877852.1 )

polysaccharide biosynthesis family protein

NC_008593
(Clostridium novyi NT)

5e-105

141) A2cp1_4432
( YP_002494815.1 )

polysaccharide biosynthesis protein CapD

NC_011891
(Anaeromyxobacter dehalogenans 2CP-1)

7e-105

142) AnaeK_4411
( YP_002136743.1 )

polysaccharide biosynthesis protein CapD

NC_011145
(Anaeromyxobacter sp. K)

1e-104

143) Desor_5144
( YP_004973048.1 )

nucleoside-diphosphate sugar epimerase

NC_016584
(Desulfosporosinus orientis DSM 765)

9e-105

144) SSUD9_0745
( YP_006080218.1 )

Cps9E

NC_017620
(Streptococcus suis D9)

2e-104

145) capD
( YP_004326848.1 )

putative nucleoside-diphosphate sugar isomerase

NC_015291
(Streptococcus oralis Uo5)

3e-104

146) Pjdr2_0353
( YP_003009120.1 )

polysaccharide biosynthesis protein CapD

NC_012914
(Paenibacillus sp. JDR-2)

4e-104

147) Desku_1733
( YP_004517103.1 )

polysaccharide biosynthesis protein CapD

NC_015573
(Desulfotomaculum kuznetsovii DSM 6115)

1e-103

148) Amet_0277
( YP_001318169.1 )

polysaccharide biosynthesis protein CapD

NC_009633
(Alkaliphilus metalliredigens QYMF)

1e-103

149) GM21_2582
( YP_003022380.1 )

polysaccharide biosynthesis protein CapD

NC_012918
(Geobacter sp. M21)

7e-104

150) Swol_0128
( YP_752854.1 )

hypothetical protein

NC_008346
(Syntrophomonas wolfei Goettingen)

7e-104

151) TepRe1_1757
( YP_004461195.1 )

polysaccharide biosynthesis protein CapD

NC_015519
(Tepidanaerobacter acetatoxydans Re1)

2e-103

152) capD
( YP_008619086.1 )

Capsular polysaccharide biosynthesis protein CapD

NC_019954
(Tepidanaerobacter acetatoxydans Re1)

2e-103

153) Gbem_1633
( YP_002138447.1 )

NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase

NC_011146
(Geobacter bemidjiensis Bem)

3e-103

154) GM18_1462
( YP_004198206.1 )

polysaccharide biosynthesis protein CapD

NC_014973
(Geobacter sp. M18)

4e-103

155) Clocl_1008
( YP_005045609.1 )

putative nucleoside-diphosphate sugar epimerase

NC_016627
(Clostridium clariflavum DSM 19732)

6e-103

156) Cthe_2650
( YP_001039042.1 )

polysaccharide biosynthesis protein CapD

NC_009012
(Clostridium thermocellum ATCC 27405)

6e-103

157) Glov_1513
( YP_001951749.1 )

polysaccharide biosynthesis protein CapD

NC_010814
(Geobacter lovleyi SZ)

6e-103

158) HMPREF9243_0860
( YP_004321158.1 )

polysaccharide biosynthesis protein

NC_015278
(Aerococcus urinae ACS-120-V-Col10a)

1e-102

159) Nther_2497
( YP_001918648.1 )

polysaccharide biosynthesis protein CapD

NC_010718
(Natranaerobius thermophilus JW/NM-WN-LF)

1e-102

160) Clo1313_0239
( YP_005686784.1 )

polysaccharide biosynthesis protein CapD

NC_017304
(Clostridium thermocellum DSM 1313)

1e-102

161) capD
( YP_003781565.1 )

capsular polysaccharide biosynthesis protein

NC_014328
(Clostridium ljungdahlii ATCC 49587)

2e-102

162) Clocl_4185
( YP_005048538.1 )

putative nucleoside-diphosphate sugar epimerase

NC_016627
(Clostridium clariflavum DSM 19732)

3e-102

163) Tlie_1827
( YP_004933635.1 )

polysaccharide biosynthesis protein CapD

NC_016148
(Thermovirga lienii DSM 17291)

3e-102

164) SP670_0173
( YP_003878355.1 )

type 1 capsular polysaccharide biosynthesis protein CapD

NC_014498
(Streptococcus pneumoniae 670-6B)

1e-101

165) SPNA45_01937
( YP_006702298.1 )

polysaccharide biosynthesis protein

NC_018594
(Streptococcus pneumoniae A45)

1e-101

166) SPN23F_01140
( YP_002510188.1 )

polysaccharide biosynthesis protein

NC_011900
(Streptococcus pneumoniae ATCC 700669)

1e-101

167) SPCG_0098
( YP_001834815.1 )

capsular polysaccharide biosynthesis protein

NC_010582
(Streptococcus pneumoniae CGSP14)

1e-101

168) SPH_0202
( YP_001693622.1 )

CapD protein, required for the biosynthesis of type 1 capsular polysaccharide

NC_010380
(Streptococcus pneumoniae Hungary19A-6)

1e-101

169) SPNINV200_00920
( YP_006065448.1 )

polysaccharide biosynthesis protein

NC_017593
(Streptococcus pneumoniae INV200)

1e-101

170) SPJ_0126
( YP_002735240.1 )

CapD protein, required for the biosynthesis of type 1 capsular polysaccharide

NC_012466
(Streptococcus pneumoniae JJA)

1e-101

171) SPNOXC_01300
( YP_006063659.1 )

polysaccharide biosynthesis protein

NC_017592
(Streptococcus pneumoniae OXC141)

1e-101

172) SPN034183_01350
( YP_007813822.1 )

polysaccharide biosynthesis protein

NC_021028
(Streptococcus pneumoniae SNP034183)

1e-101

173) SPN994038_01350
( YP_007812004.1 )

polysaccharide biosynthesis protein

NC_021026
(Streptococcus pneumoniae SNP994038)

1e-101

174) SPN994039_01350
( YP_007762678.1 )

polysaccharide biosynthesis protein

NC_021005
(Streptococcus pneumoniae SNP994039)

1e-101

175) MYY_0174
( YP_006252372.1 )

capsular polysaccharide biosynthesis protein

NC_017769
(Streptococcus pneumoniae ST556)

1e-101

176) SPT_0137
( YP_002741647.1 )

CapD protein, required for the biosynthesis of type 1 capsular polysaccharide

NC_012469
(Streptococcus pneumoniae Taiwan19F-14)

1e-101

177) HMPREF0837_10392
( YP_003723834.1 )

capsular polysaccharide biosynthesis protein

NC_014251
(Streptococcus pneumoniae TCH8431/19A)

1e-101

178) SP_0103
( NP_344650.1 )

capsular polysaccharide biosynthesis protein

NC_003028
(Streptococcus pneumoniae TIGR4)

1e-101

179) SPPN_01040
( YP_004767512.1 )

type 1 capsular polysaccharide biosynthesis protein CapD

NC_015875
(Streptococcus pseudopneumoniae IS7493)

8e-102

180) SPAP_0145
( YP_003875741.1 )

putative nucleoside-diphosphate sugar epimerase

NC_014494
(Streptococcus pneumoniae AP200)

2e-101

181) capD
( YP_815587.1 )

capsular polysaccharide biosynthesis protein

NC_008533
(Streptococcus pneumoniae D39)

2e-101

182) SPG_0100
( YP_002036815.1 )

capsular polysaccharide biosynthesis protein

NC_011072
(Streptococcus pneumoniae G54)

2e-101

183) capD
( NP_357686.1 )

CapD protein, required for the biosynthesis of type 1 capsular polysaccharide

NC_003098
(Streptococcus pneumoniae R6)

2e-101

184) SPN034156_11970
( YP_007765474.1 )

polysaccharide biosynthesis protein

NC_021006
(Streptococcus pneumoniae SNP034156)

2e-101

185) smi_1982
( YP_003447078.1 )

nucleoside-diphosphate sugar isomerase

NC_013853
(Streptococcus mitis B6)

2e-101

186) GM18_1465
( YP_004198208.1 )

polysaccharide biosynthesis protein CapD

NC_014973
(Geobacter sp. M18)

2e-101

187) HMPREF1038_00163
( YP_006742368.1 )

epimerase/dehydratase WbiI

NC_018630
(Streptococcus pneumoniae gamPNI0373)

3e-101

188) INV104_00820
( YP_006061790.1 )

polysaccharide biosynthesis protein

NC_017591
(Streptococcus pneumoniae INV104)

3e-101

189) SPP_0162
( YP_002737394.1 )

CapD protein, required for the biosynthesis of type 1 capsular polysaccharide

NC_012467
(Streptococcus pneumoniae P1031)

3e-101

190) epsC
( YP_007458354.1 )

putative polysaccharide biosynthesis protein EpsC

NC_020291
(Clostridium saccharoperbutylacetonicum N1-4(HMT))

3e-101

191) Cbei_4629
( YP_001311693.1 )

polysaccharide biosynthesis protein CapD

NC_009617
(Clostridium beijerinckii NCIMB 8052)

3e-101

192) EAT1b_1378
( YP_002885750.1 )

polysaccharide biosynthesis protein CapD

NC_012673
(Exiguobacterium sp. AT1b)

4e-101

193) Hprae_0363
( YP_005835679.1 )

polysaccharide biosynthesis protein CapD

NC_017455
(Halanaerobium praevalens DSM 2228)

4e-101

194) Exig_2574
( YP_001815040.1 )

polysaccharide biosynthesis protein CapD

NC_010556
(Exiguobacterium sibiricum 255-15)

6e-101

195) Riv7116_0259
( YP_007053411.1 )

putative nucleoside-diphosphate sugar epimerase

NC_019678
(Rivularia sp. PCC 7116)

3e-100

196) SP70585_0166
( YP_002739477.1 )

CapD protein, required for the biosynthesis of type 1 capsular polysaccharide

NC_012468
(Streptococcus pneumoniae 70585)

7e-100

197) Cal6303_1093
( YP_007136128.1 )

polysaccharide biosynthesis protein CapD

NC_019751
(Calothrix sp. PCC 6303)

2e-99

198) epsC
( YP_006919014.1 )

polysaccharide biosynthesis protein EpsC

NC_018870
(Thermacetogenium phaeum DSM 12270)

4e-99

199) CLH_2929
( YP_001922306.1 )

Cap5D

NC_010723
(Clostridium botulinum Alaska E43)

5e-99

200) SELR_26940
( YP_005434425.1 )

putative polysaccharide biosynthesis protein

NC_017068
(Selenomonas ruminantium TAM6421)

6e-99

201) capD
( YP_005269752.1 )

capsular polysaccharide biosynthesis protein CapD

NC_016894
(Acetobacterium woodii DSM 1030)

1e-98

202) Dred_3050
( YP_001114377.1 )

polysaccharide biosynthesis protein CapD

NC_009253
(Desulfotomaculum reducens MI-1)

1e-98

203) TTE0668
( NP_622330.1 )

nucleoside-diphosphate sugar epimerase

NC_003869
(Thermoanaerobacter tengcongensis MB4)

9e-99

204) Sgly_3011
( YP_004267281.1 )

polysaccharide biosynthesis protein CapD

NC_015172
(Syntrophobotulus glycolicus DSM 8271)

2e-98

205) CbC4_0991
( YP_004395668.1 )

exopolysaccharide biosynthesis protein

NC_015425
(Clostridium botulinum BKT015925)

6e-98

206) Thexy_1791
( YP_004471487.1 )

polysaccharide biosynthesis protein CapD

NC_015555
(Thermoanaerobacterium xylanolyticum LX-11)

6e-98

207) Cagg_1997
( YP_002463321.1 )

polysaccharide biosynthesis protein CapD

NC_011831
(Chloroflexus aggregans DSM 9485)

9e-98

208) CLS_02560
( YP_007848112.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021047
(Clostridium saccharolyticum K10)

2e-97

209) CD630_27690
( YP_001089282.1 )

polysaccharide biosynthesis protein

NC_009089
(Clostridium difficile 630)

3e-97

210) CLL_A3186
( YP_001887372.1 )

capsular polysaccharide biosynthesis protein

NC_010674
(Clostridium botulinum Eklund 17B)

6e-97

211) Acear_2111
( YP_003828666.1 )

polysaccharide biosynthesis protein CapD

NC_014378
(Acetohalobium arabaticum DSM 5501)

1e-96

212) capDb
( YP_007553016.1 )

capsular polysaccharide biosynthesis protein

NC_020516
(Azoarcus sp. KH32C)

1e-96

213) Vpar_0669
( YP_003311632.1 )

polysaccharide biosynthesis protein CapD

NC_013520
(Veillonella parvula DSM 2008)

2e-96

214) Cphy_3494
( YP_001560584.1 )

polysaccharide biosynthesis protein CapD

NC_010001
(Clostridium phytofermentans ISDg)

3e-96

215) yveM
( YP_002773739.1 )

polysaccharide biosynthesis protein

NC_012491
(Brevibacillus brevis NBRC 100599)

4e-96

216) ROI_04900
( YP_007830821.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021040
(Roseburia intestinalis M50/1)

7e-96

217) capD
( YP_001396556.1 )

protein CapD

NC_009706
(Clostridium kluyveri DSM 555)

1e-95

218) CKR_2815
( YP_002473280.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

1e-95

219) RO1_35260
( YP_007779575.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021012
(Roseburia intestinalis XB6B4)

2e-95

220) Trad_0100
( YP_003703785.1 )

polysaccharide biosynthesis protein CapD

NC_014221
(Truepera radiovictrix DSM 17093)

2e-95

221) capD
( YP_007821462.1 )

putative capsular polysaccharide biosynthesis protein

NC_021033
(Taylorella asinigenitalis 14/45)

2e-95

222) Amico_1715
( YP_003554554.1 )

polysaccharide biosynthesis protein CapD

NC_014011
(Aminobacterium colombiense DSM 12261)

3e-95

223) Rcas_1360
( YP_001431474.1 )

polysaccharide biosynthesis protein CapD

NC_009767
(Roseiflexus castenholzii DSM 13941)

4e-95

224) capD
( YP_007825518.1 )

putative capsular polysaccharide biosynthesis protein

NC_021036
(Taylorella equigenitalis 14/56)

6e-95

225) capD
( YP_006502118.1 )

putative capsular polysaccharide biosynthesis protein

NC_018108
(Taylorella equigenitalis ATCC 35865)

6e-95

226) Slip_0161
( YP_003701526.1 )

polysaccharide biosynthesis protein CapD

NC_014220
(Syntrophothermus lipocalidus DSM 12680)

2e-94

227) capD2
( YP_003798314.1 )

polysaccharide biosynthesis protein CapD

NC_014355
(Candidatus Nitrospira defluvii )

2e-94

228) TEQUI_1023
( YP_004130091.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_014914
(Taylorella equigenitalis MCE9)

2e-94

229) Halsa_0607
( YP_003994417.1 )

polysaccharide biosynthesis protein CapD

NC_014654
(Halanaerobium hydrogeniformans sapolanicus)

5e-94

230) Tbd_1871
( YP_315629.1 )

epimerase/dehydratase-like biosynthesis protein

NC_007404
(Thiobacillus denitrificans ATCC 25259)

5e-94

231) CLM_3515
( YP_002805630.1 )

exopolysaccharide biosynthesis protein

NC_012563
(Clostridium botulinum Kyoto)

6e-94

232) TASI_0395
( YP_004874194.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_016043
(Taylorella asinigenitalis MCE3)

6e-94

233) NH44784_023811
( YP_008029468.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-93

234) Dsui_0400
( YP_005026655.1 )

putative nucleoside-diphosphate sugar epimerase

NC_016616
(Dechlorosoma suillum PS)

2e-93

235) Apre_1272
( YP_003153016.1 )

polysaccharide biosynthesis protein CapD

NC_013171
(Anaerococcus prevotii DSM 20548)

3e-93

236) EUR_25350
( YP_007773621.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021010
(Eubacterium rectale DSM 17629)

4e-93

237) ERE_08710
( YP_007841734.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021044
(Eubacterium rectale M104/1)

7e-93

238) Npun_F1367
( YP_001865018.1 )

polysaccharide biosynthesis protein CapD

NC_010628
(Nostoc punctiforme PCC 73102)

7e-93

239) CD196_2610
( YP_003215628.1 )

capsular polysaccharide biosynthesis protein

NC_013315
(Clostridium difficile CD196)

2e-92

240) CDR20291_2657
( YP_003219136.1 )

capsular polysaccharide biosynthesis protein

NC_013316
(Clostridium difficile R20291)

2e-92

241) EUBREC_2619
( YP_002938484.1 )

UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase

NC_012781
(Eubacterium rectale ATCC 33656)

2e-92

242) CBF_3157
( YP_005675956.1 )

exopolysaccharide biosynthesis protein

NC_017297
(Clostridium botulinum 230613)

4e-92

243) CLI_3168
( YP_001392387.1 )

exopolysaccharide biosynthesis protein

NC_009699
(Clostridium botulinum Langeland)

4e-92

244) Deipe_0919
( YP_007180253.1 )

nucleoside-diphosphate sugar epimerase

NC_019793
(Deinococcus peraridilitoris DSM 19664)

5e-92

245) capD2
( YP_002604223.1 )

protein CapD2

NC_012108
(Desulfobacterium autotrophicum HRM2)

6e-92

246) Ctha_2155
( YP_001997053.1 )

polysaccharide biosynthesis protein CapD

NC_011026
(Chloroherpeton thalassium ATCC 35110)

1e-91

247) ebA1630
( YP_157915.1 )

polysaccharide biosynthesis protein

NC_006513
(Aromatoleum aromaticum EbN1)

2e-91

248) Dole_1009
( YP_001528896.1 )

polysaccharide biosynthesis protein CapD

NC_009943
(Desulfococcus oleovorans Hxd3)

3e-91

249) Npun_F2440
( YP_001865944.1 )

polysaccharide biosynthesis protein CapD

NC_010628
(Nostoc punctiforme PCC 73102)

1e-90

250) H04402_03186
( YP_005679717.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_017299
(Clostridium botulinum H04402 065)

7e-91

251) EUBELI_00082
( YP_002929566.1 )

hypothetical protein

NC_012778
(Eubacterium eligens ATCC 27750)

7e-91

252) CL2_27340
( YP_007790541.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021016
(butyrate-producing bacterium SSC/2)

1e-90

253) Metme_1198
( YP_004512126.1 )

polysaccharide biosynthesis protein CapD

NC_015572
(Methylomonas methanica MC09)

1e-90

254) Caur_0945
( YP_001634566.1 )

polysaccharide biosynthesis protein CapD

NC_010175
(Chloroflexus aurantiacus J-10-fl)

2e-90

255) Chy400_1031
( YP_002568779.1 )

polysaccharide biosynthesis protein CapD

NC_012032
(Chloroflexus sp. Y-400-fl)

2e-90

256) PTH_1075
( YP_001211625.1 )

nucleoside-diphosphate sugar epimerases

NC_009454
(Pelotomaculum thermopropionicum SI)

2e-90

257) CLB_3138
( YP_001385431.1 )

exopolysaccharide biosynthesis protein

NC_009697
(Clostridium botulinum ATCC 19397)

3e-90

258) CBO3109
( YP_001255601.1 )

exopolysaccharide biosynthesis protein

NC_009495
(Clostridium botulinum ATCC 3502)

3e-90

259) CLC_3011
( YP_001388838.1 )

exopolysaccharide biosynthesis protein

NC_009698
(Clostridium botulinum Hall)

3e-90

260) ANT_22620
( YP_004174888.1 )

putative polysaccharide biosynthesis protein

NC_014960
(Anaerolinea thermophila UNI-1)

3e-90

261) CLJ_B3375
( YP_002864117.1 )

exopolysaccharide biosynthesis protein

NC_012658
(Clostridium botulinum 657)

4e-90

262) CLK_2503
( YP_001788430.1 )

exopolysaccharide biosynthesis protein

NC_010520
(Clostridium botulinum Loch Maree)

4e-90

263) CLD_1431
( YP_001782744.1 )

exopolysaccharide biosynthesis protein

NC_010516
(Clostridium botulinum Okra)

4e-90

264) Deipr_2068
( YP_004264059.1 )

polysaccharide biosynthesis protein CapD

NC_015169
(Deinococcus proteolyticus MRP)

7e-90

265) CPE0463
( NP_561379.1 )

capsular polysaccharide biosynthesis protein

NC_003366
(Clostridium perfringens 13)

9e-90

266) AXYL_06301
( YP_003982309.1 )

polysaccharide biosynthesis protein

NC_014640
(Achromobacter xylosoxidans A8)

4e-89

267) Cylst_4196
( YP_007148976.1 )

putative nucleoside-diphosphate sugar epimerase

NC_019757
(Cylindrospermum stagnale PCC 7417)

4e-89

268) Elen_2347
( YP_003182694.1 )

polysaccharide biosynthesis protein CapD

NC_013204
(Eggerthella lenta DSM 2243)

5e-89

269) EGYY_08980
( YP_004710488.1 )

putative nucleoside-diphosphate sugar epimerase

NC_015738
(Eggerthella sp. YY7918)

9e-89

270) SYN_02670
( YP_462657.1 )

UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase

NC_007759
(Syntrophus aciditrophicus SB)

9e-89

271) wbiI
( YP_004030003.1 )

nucleotide sugar epimerase/dehydratase

NC_014722
(Burkholderia rhizoxinica HKI 454)

1e-88

272) AM1_3626
( YP_001517932.1 )

capsular polysaccharide biosynthesis protein

NC_009925
(Acaryochloris marina MBIC11017)

2e-88

273) capD
( YP_002786788.1 )

capsular polysaccharide biosynthesis protein capD

NC_012526
(Deinococcus deserti VCD115)

3e-88

274) LRC_00890
( YP_004831358.1 )

exopolysaccharide biosynthesis protein

NC_015975
(Lactobacillus ruminis ATCC 27782)

5e-88

275) Mfla_1278
( YP_545387.1 )

polysaccharide biosynthesis protein CapD

NC_007947
(Methylobacillus flagellatus KT)

1e-87

276) yveM
( YP_003935436.1 )

putative capsular polysaccharide biosynthesis protein YveM

NC_014614
(Clostridium sticklandii DSM 519)

6e-88

277) FMG_1137
( YP_001692445.1 )

capsular polysaccharide biosynthesis protein

NC_010376
(Finegoldia magna ATCC 29328)

8e-88

278) Deima_2963
( YP_004172257.1 )

polysaccharide biosynthesis protein CapD

NC_014958
(Deinococcus maricopensis DSM 21211)

1e-87

279) TVNIR_1899
( YP_007217041.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_019902
(Thioalkalivibrio nitratireducens DSM 14787)

1e-87

280) RBR_04740
( YP_007780647.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021013
(Ruminococcus bromii L2-63)

3e-87

281) Pcar_1536
( YP_006717261.1 )

NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase

NC_007498
(Pelobacter carbinolicus DSM 2380)

5e-87

282) LSL_0995
( YP_535886.1 )

UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase

NC_007929
(Lactobacillus salivarius UCC118)

6e-87

283) Mmol_1039
( YP_003048475.1 )

polysaccharide biosynthesis protein CapD

NC_012968
(Methylotenera mobilis JLW8)

7e-87

284) MPQ_1724
( YP_004040113.1 )

polysaccharide biosynthesis protein capd

NC_014733
(Methylovorus sp. MP688)

1e-86

285) Msip34_1724
( YP_003051496.1 )

polysaccharide biosynthesis protein CapD

NC_012969
(Methylovorus glucosetrophus SIP3-4)

8e-87

286) HN6_00820
( YP_005863883.1 )

UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase

NC_017481
(Lactobacillus salivarius CECT 5713)

2e-86

287) Calni_0125
( YP_004050202.1 )

polysaccharide biosynthesis protein capd

NC_014758
(Calditerrivibrio nitroreducens DSM 19672)

4e-86

288) Alvin_3100
( YP_003445031.1 )

polysaccharide biosynthesis protein CapD

NC_013851
(Allochromatium vinosum DSM 180)

4e-86

289) GBP346_A3270
( YP_002897945.1 )

putative epimerase/dehydratase WbiI

NC_012695
(Burkholderia pseudomallei MSHR346)

4e-86

290) ebA5907
( YP_160386.1 )

nucleoside-diphosphate sugar epimerase

NC_006513
(Aromatoleum aromaticum EbN1)

4e-86

291) Ccur_05820
( YP_003150981.1 )

nucleoside-diphosphate sugar epimerase

NC_013170
(Cryptobacterium curtum DSM 15641)

6e-86

292) M301_1256
( YP_003674216.1 )

polysaccharide biosynthesis protein CapD

NC_014207
(Methylotenera versatilis 301)

2e-85

293) capD
( YP_004845682.1 )

polysaccharide biosynthesis protein CapD

NC_016002
(Pseudogulbenkiania sp. NH8B)

2e-85

294) capD
( YP_003777599.1 )

polysaccharide biosynthesis protein

NC_014323
(Herbaspirillum seropedicae SmR1)

3e-85

295) K734_02850
( YP_008034071.1 )

epimerase

NC_021286
(Idiomarina loihiensis GSL 199)

3e-85

296) IL0569
( YP_154959.1 )

epimerase

NC_006512
(Idiomarina loihiensis L2TR)

3e-85

297) Rfer_2679
( YP_523926.1 )

polysaccharide biosynthesis protein CapD

NC_007908
(Rhodoferax ferrireducens T118)

3e-85

298) DICTH_0426
( YP_002250308.1 )

CapD protein

NC_011297
(Dictyoglomus thermophilum H-6-12)

4e-85

299) Thivi_2782
( YP_006414825.1 )

putative nucleoside-diphosphate sugar epimerase

NC_018012
(Thiocystis violascens DSM 198)

5e-85

300) CK1_17560
( YP_007783490.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021014
(Ruminococcus sp. SR1/5)

5e-85

301) RB2501_13474
( YP_003195684.1 )

capsular polysaccharide biosynthesis protein

NC_013222
(Robiginitalea biformata HTCC2501)

7e-85

302) Marpi_1345
( YP_005097046.1 )

nucleoside-diphosphate sugar epimerase

NC_016751
(Marinitoga piezophila KA3)

7e-85

303) wbpM
( NP_840587.1 )

polysaccharide biosynthesis protein CapD type

NC_004757
(Nitrosomonas europaea ATCC 19718)

9e-85

304) Nit79A3_0675
( YP_004693953.1 )

polysaccharide biosynthesis protein CapD

NC_015731
(Nitrosomonas sp. Is79A3)

1e-84

305) Dbac_3268
( YP_003159758.1 )

polysaccharide biosynthesis protein CapD

NC_013173
(Desulfomicrobium baculatum DSM 4028)

1e-84

306) ELI_3080
( YP_003961012.1 )

hypothetical protein

NC_014624
(Eubacterium limosum KIST612)

1e-84

307) pRL90052
( YP_765345.1 )

putative polysaccharide biosynthesis O-antigen related protein

NC_008379
(Rhizobium leguminosarum 3841)

3e-84

308) Daro_1278
( YP_284500.1 )

NAD-dependent epimerase/dehydratase

NC_007298
(Dechloromonas aromatica RCB)

4e-84

309) MCA0903
( YP_113388.1 )

polysaccharide biosynthesis protein

NC_002977
(Methylococcus capsulatus Bath)

4e-84

310) RL0810
( YP_766419.1 )

polysaccharide synthesis

NC_008380
(Rhizobium leguminosarum 3841)

4e-84

311) Neut_0186
( YP_746437.1 )

polysaccharide biosynthesis protein CapD

NC_008344
(Nitrosomonas eutropha C91)

6e-84

312) SPISAL_08115
( YP_008047182.1 )

polysaccharide biosynthesis protein CapD

NC_021291
(Spiribacter salinus M19-40)

7e-84

313) Nwat_2113
( YP_003761267.1 )

polysaccharide biosynthesis protein CapD

NC_014315
(Nitrosococcus watsonii C-113)

8e-84

314) CYCME_0466
( YP_008373166.1 )

putative nucleoside-diphosphate sugar epimerase

NC_021917
(Cycloclasticus zancles 7-ME)

1e-83

315) CAP2UW1_0118
( YP_003165407.1 )

polysaccharide biosynthesis protein CapD

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

1e-83

316) Theba_2013
( YP_006346899.1 )

nucleoside-diphosphate sugar epimerase

NC_017934
(Mesotoga prima MesG1.Ag.4.2)

9e-84

317) Calkr_2286
( YP_004027353.1 )

polysaccharide biosynthesis protein capd

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

2e-83

318) Calla_0167
( YP_004797829.1 )

polysaccharide biosynthesis protein CapD

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

2e-83

319) SCD_n02873
( YP_008547704.1 )

polysaccharide biosynthesis protein CapD

NC_022357
(Sulfuricella denitrificans skB26)

2e-83

320) wbgZ
( YP_001141296.1 )

polysaccharide biosynthesis protein WbgZ

NC_009348
(Aeromonas salmonicida A449)

2e-83

321) capD
( YP_007325345.1 )

Capsular polysaccharide biosynthesis protein CapD

NC_020055
(Desulfovibrio hydrothermalis DSM 14728)

2e-83

322) Desal_3620
( YP_002993205.1 )

polysaccharide biosynthesis protein CapD

NC_012881
(Desulfovibrio salexigens DSM 2638)

2e-83

323) LLO_0936
( YP_003454421.1 )

nucleoside-diphosphate sugar epimerases

NC_013861
(Legionella longbeachae NSW150)

2e-83

324) Rleg_6005
( YP_002978517.1 )

polysaccharide biosynthesis protein CapD

NC_012852
(Rhizobium leguminosarum WSM1325)

3e-83

325) R2APBS1_1806
( YP_007590168.1 )

putative nucleoside-diphosphate sugar epimerase

NC_020541
(Rhodanobacter sp. 2APBS1)

5e-83

326) Kole_1759
( YP_002941448.1 )

polysaccharide biosynthesis protein CapD

NC_012785
(Kosmotoga olearia TBF 19.5.1)

1e-82

327) lpsB2
( YP_001984979.1 )

dTDP-glucose 4,6-dehydratase

NC_010997
(Rhizobium etli CIAT 652)

1e-82

328) REMIM1_CH00792
( YP_008363571.1 )

polysaccharide biosynthesis CapD-like protein

NC_021905
(Rhizobium etli Mim1)

1e-82

329) capD
( NP_782812.1 )

capD protein

NC_004557
(Clostridium tetani E88)

8e-83

330) lpsB2
( YP_471773.1 )

dTDP-glucose 4,6-dehydratase

NC_007763
(Rhizobium etli CFN 42)

2e-82

331) REMIM1_PA00003
( YP_008366884.1 )

polysaccharide biosynthesis CapD-like protein

NC_021906
(Rhizobium etli Mim1)

2e-82

332) wbfY
( NP_718727.1 )

polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY

NC_004347
(Shewanella oneidensis MR-1)

3e-82

333) Celal_3148
( YP_004165920.1 )

polysaccharide biosynthesis protein capd

NC_014934
(Cellulophaga algicola DSM 14237)

3e-82

334) lpa_01458
( YP_003618251.1 )

nucleoside-diphosphate sugar epimerase

NC_014125
(Legionella pneumophila 2300/99 Alcoy)

4e-82

335) lp12_0988
( YP_005185356.1 )

nucleoside-diphosphate sugar epimerase

NC_016811
(Legionella pneumophila ATCC 43290)

4e-82

336) capD
( YP_001251589.1 )

nucleoside-diphosphate sugar epimerase

NC_009494
(Legionella pneumophila Corby)

4e-82

337) lpg0966
( YP_095000.1 )

nucleoside-diphosphate sugar epimerases

NC_002942
(Legionella pneumophila Philadelphia 1)

4e-82

338) capD
( YP_008062670.1 )

nucleoside-diphosphate sugar epimerase

NC_021350
(Legionella pneumophila Thunder Bay)

4e-82

339) mma_2254
( YP_001353944.1 )

nucleoside-diphosphate sugar epimerases

NC_009659
(Janthinobacterium sp. Marseille)

5e-82

340) SELR_17400
( YP_005433471.1 )

putative capsular polysaccharide biosynthesis protein

NC_017068
(Selenomonas ruminantium TAM6421)

5e-82

341) LPV_1104
( YP_006508183.1 )

capsular polysaccharide biosynthesis protein

NC_018140
(Legionella pneumophila HL06041035)

5e-82

342) LPO_1050
( YP_006505063.1 )

capsular polysaccharide biosynthesis protein

NC_018139
(Legionella pneumophila Lorraine)

5e-82

343) wbpM
( YP_004751470.1 )

nucleoside-diphosphate sugar epimerase/dehydratase

NC_015856
(Collimonas fungivorans Ter331)

5e-82

344) Dtur_0573
( YP_002352476.1 )

polysaccharide biosynthesis protein CapD

NC_011661
(Dictyoglomus turgidum DSM 6724)

6e-82

345) lpl0995
( YP_126354.1 )

hypothetical protein

NC_006369
(Legionella pneumophila Lens)

6e-82

346) LPE509_02241
( YP_007568784.1 )

Polysaccharide biosynthesis protein

NC_020521
(Legionella pneumophila Philadelphia 1)

6e-82

347) CV_4115
( NP_903785.1 )

polysaccharide biosynthesis protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

7e-82

348) lpp1028
( YP_123356.1 )

hypothetical protein

NC_006368
(Legionella pneumophila Paris)

7e-82

349) FSU_0179
( YP_005820338.1 )

capsular polysaccharide biosynthesis protein

NC_017448
(Fibrobacter succinogenes S85)

1e-81

350) Swoo_1680
( YP_001760060.1 )

polysaccharide biosynthesis protein CapD

NC_010506
(Shewanella woodyi ATCC 51908)

1e-81

351) Desti_4692
( YP_006449577.1 )

putative nucleoside-diphosphate sugar epimerase

NC_018025
(Desulfomonile tiedjei DSM 6799)

1e-81

352) YSA_02152
( YP_006385049.1 )

polysaccharide biosynthesis protein CapD

NC_017986
(Pseudomonas putida ND6)

2e-81

353) G655_09090
( YP_007708665.1 )

nucleotide sugar epimerase/dehydratase

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-81

354) wbpM
( YP_005982480.1 )

nucleotide sugar epimerase/dehydratase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

2e-81

355) SYN_02689
( YP_462638.1 )

UDP-N-acetylglucosamine 4,6-dehydratase / UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase

NC_007759
(Syntrophus aciditrophicus SB)

3e-81

356) Sden_2645
( YP_563647.1 )

polysaccharide biosynthesis protein CapD

NC_007954
(Shewanella denitrificans OS217)

3e-81

357) wbpM
( YP_002439522.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_011770
(Pseudomonas aeruginosa LESB58)

3e-81

358) wbpM
( YP_005974410.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_017548
(Pseudomonas aeruginosa M18)

3e-81

359) PPS_1447
( YP_004700902.1 )

polysaccharide biosynthesis protein CapD

NC_015733
(Pseudomonas putida S16)

3e-81

360) Solca_0327
( YP_006254646.1 )

putative nucleoside-diphosphate sugar epimerase

NC_017770
(Solitalea canadensis DSM 3403)

4e-81

361) PSPA7_1986
( YP_001347367.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_009656
(Pseudomonas aeruginosa PA7)

4e-81

362) cap1D
( YP_006533695.1 )

polysaccharide biosynthesis protein CapD

NC_018220
(Pseudomonas putida DOT-T1E)

4e-81

363) SVI_1496
( YP_003556245.1 )

polysaccharide biosynthesis protein

NC_014012
(Shewanella violacea DSS12)

5e-81

364) wbpM
( NP_743960.1 )

polysaccharide biosynthesis protein CapD

NC_002947
(Pseudomonas putida KT2440)

5e-81

365) Sbal117_3014
( YP_006038197.1 )

polysaccharide biosynthesis protein CapD

NC_017579
(Shewanella baltica OS117)

6e-81

366) Sbal_2876
( YP_001051228.1 )

polysaccharide biosynthesis protein CapD

NC_009052
(Shewanella baltica OS155)

6e-81

367) B565_2775
( YP_004393427.1 )

epimerase/dehydratase family WbfY-like protein

NC_015424
(Aeromonas veronii B565)

1e-80

368) NAL212_0301
( YP_004293418.1 )

polysaccharide biosynthesis protein CapD

NC_015222
(Nitrosomonas sp. AL212)

1e-80

369) Sama_2244
( YP_928119.1 )

polysaccharide biosynthesis protein

NC_008700
(Shewanella amazonensis SB2B)

2e-80

370) Gura_1702
( YP_001230470.1 )

polysaccharide biosynthesis protein CapD

NC_009483
(Geobacter uraniireducens Rf4)

2e-80

371) Rleg2_6495
( YP_002284248.1 )

polysaccharide biosynthesis protein CapD

NC_011371
(Rhizobium leguminosarum WSM2304)

2e-80

372) PputW619_1414
( YP_001748288.1 )

polysaccharide biosynthesis protein CapD

NC_010501
(Pseudomonas putida W619)

2e-80

373) BN4_12169
( YP_007494555.1 )

Polysaccharide biosynthesis protein CapD

NC_020409
(Desulfovibrio piezophilus C1TLV30)

3e-80

374) Tnap_1260
( YP_003346759.1 )

polysaccharide biosynthesis protein CapD

NC_013642
(Thermotoga naphthophila RKU-10)

5e-80

375) Tpet_1244
( YP_001244834.1 )

polysaccharide biosynthesis protein CapD

NC_009486
(Thermotoga petrophila RKU-1)

5e-80

376) TRQ2_1211
( YP_001739238.1 )

polysaccharide biosynthesis protein CapD

NC_010483
(Thermotoga sp. RQ2)

5e-80

377) capD2
( YP_008001634.1 )

capsular polysaccharide biosynthesis protein CapD

NC_021237
(Pseudomonas fluorescens CHA0)

5e-80

378) Hoch_0082
( YP_003264616.1 )

polysaccharide biosynthesis protein CapD

NC_013440
(Haliangium ochraceum DSM 14365)

1e-79

379) amb0099
( YP_419462.1 )

nucleoside-diphosphate sugar epimerase

NC_007626
(Magnetospirillum magneticum AMB-1)

9e-80

380) TVNIR_1906
( YP_007217048.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_019902
(Thioalkalivibrio nitratireducens DSM 14787)

9e-80

381) Spea_1416
( YP_001501276.1 )

polysaccharide biosynthesis protein CapD

NC_009901
(Shewanella pealeana ATCC 700345)

2e-79

382) Taci_0039
( YP_003316561.1 )

polysaccharide biosynthesis protein CapD

NC_013522
(Thermanaerovibrio acidaminovorans DSM 6589)

2e-79

383) CPS_0594
( YP_267344.1 )

polysaccharide biosynthesis protein

NC_003910
(Colwellia psychrerythraea 34H)

2e-79

384) TOL2_C08050
( YP_006759677.1 )

polysaccharide biosynthesis protein

NC_018645
(Desulfobacula toluolica Tol2)

2e-79

385) Rumal_1785
( YP_004104917.1 )

polysaccharide biosynthesis protein CapD

NC_014833
(Ruminococcus albus 7)

2e-79

386) Sbal223_1486
( YP_002357416.1 )

polysaccharide biosynthesis protein CapD

NC_011663
(Shewanella baltica OS223)

2e-79

387) CXIVA_25490
( YP_004709620.1 )

putative nucleoside-diphosphate sugar epimerase

NC_015737
(Clostridium sp. SY8519)

3e-79

388) Dde_0360
( YP_386856.1 )

polysaccharide biosynthesis protein CapD

NC_007519
(Desulfovibrio alaskensis G20)

4e-79

389) Psest_1825
( YP_007240001.1 )

nucleoside-diphosphate sugar epimerase

NC_019936
(Pseudomonas stutzeri RCH2)

4e-79

390) TM1548
( NP_229348.1 )

lipopolysaccharide biosynthesis protein

NC_000853
(Thermotoga maritima MSB8)

6e-79

391) Tmari_1556
( YP_007977905.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_021214
(Thermotoga maritima MSB8)

6e-79

392) TSC_c03010
( YP_004201489.1 )

epimerase/dehydratase WbiI

NC_014974
(Thermus scotoductus SA-01)

7e-79

393) wbpM
( YP_008115018.1 )

polysaccharide biosynthesis protein WbpM

NC_021505
(Pseudomonas putida NBRC 14164)

8e-79

394) TOL_2266
( YP_007682905.1 )

putative epimerase/dehydratase

NC_020888
(Thalassolituus oleivorans MIL-1)

1e-78

395) Pmob_1801
( YP_001568813.1 )

polysaccharide biosynthesis protein CapD

NC_010003
(Petrotoga mobilis SJ95)

2e-78

396) wbpM
( YP_005207078.1 )

protein WbpM

NC_016830
(Pseudomonas fluorescens F113)

2e-78

397) MARHY2533
( YP_005430420.1 )

dTDP-glucose-4, 6-dehydratase

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

3e-78

398) swp_1595
( YP_002310963.1 )

Polysaccharide biosynthesis protein CapD

NC_011566
(Shewanella piezotolerans WP3)

3e-78

399) PputGB1_1379
( YP_001667622.1 )

polysaccharide biosynthesis protein CapD

NC_010322
(Pseudomonas putida GB-1)

5e-78

400) ERH_1448
( YP_004561542.1 )

polysaccharide biosynthesis protein

NC_015601
(Erysipelothrix rhusiopathiae Fujisawa)

6e-78

401) MEALZ_0067
( YP_004915379.1 )

polysaccharide biosynthesis protein CapD

NC_016112
(Methylomicrobium alcaliphilum 20Z)

6e-78

402) Sfum_3360
( YP_847468.1 )

polysaccharide biosynthesis protein CapD

NC_008554
(Syntrophobacter fumaroxidans MPOB)

6e-78

403) SULAZ_0357
( YP_002728351.1 )

polysaccharide biosynthesis protein CapD

NC_012438
(Sulfurihydrogenibium azorense Az-Fu1)

7e-78

404) wbfY
( YP_004821975.1 )

wbfy protein

NC_015964
(Haemophilus parainfluenzae T3T1)

8e-78

405) CIY_26710
( YP_007820320.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021031
(Butyrivibrio fibrisolvens 16/4)

9e-78

406) ACIAD0096
( YP_044897.1 )

dTDP-glucose-4,6-dehydratase/UDP-glucose 4-epimerase

NC_005966
(Acinetobacter sp. ADP1)

1e-77

407) XNC1_0138
( YP_003710483.1 )

dTDP-glucose-4,6-dehydratase/UDP-glucose 4-epimerase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-77

408) PSEBR_a1575
( YP_004352780.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_015379
(Pseudomonas brassicacearum NFM421)

2e-77

409) B479_06985
( YP_007228256.1 )

polysaccharide biosynthesis protein CapD

NC_019905
(Pseudomonas putida PC9)

2e-77

410) PSEBR_a1571
( YP_004352776.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_015379
(Pseudomonas brassicacearum NFM421)

9e-78

411) Tlet_1006
( YP_001470636.1 )

polysaccharide biosynthesis protein CapD

NC_009828
(Thermotoga lettingae TMO)

2e-77

412) wbpM
( YP_008102324.1 )

polysaccharide biosynthesis protein WbpM

NC_021499
(Pseudomonas resinovorans NBRC 106553)

2e-77

413) Pedsa_3253
( YP_004275610.1 )

polysaccharide biosynthesis protein CapD

NC_015177
(Pedobacter saltans DSM 12145)

4e-77

414) ELI_13370
( YP_459563.1 )

polysaccharide biosynthesis protein CapD

NC_007722
(Erythrobacter litoralis HTCC2594)

7e-77

415) MDS_1979
( YP_004379762.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_015410
(Pseudomonas mendocina NK-01)

1e-76

416) Mlg_0802
( YP_741646.1 )

polysaccharide biosynthesis protein CapD

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

1e-76

417) A11Q_1460
( YP_007645283.1 )

nucleotide sugar epimerase/dehydratase

NC_020813
(Bdellovibrio exovorus JSS)

7e-77

418) Psyr_3636
( YP_236706.1 )

polysaccharide biosynthesis protein CapD

NC_007005
(Pseudomonas syringae B728a)

9e-77

419) pglF
( YP_008330626.1 )

N-acetyl-hexosamine dehydratase

NC_021878
(Arcobacter butzleri 7h1h)

1e-76

420) Q7C_745
( YP_006292603.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_017856
(Methylophaga sp. JAM7)

2e-76

421) CTN_1131
( YP_002534673.1 )

Lipopolysaccharide biosynthesis protein

NC_011978
(Thermotoga neapolitana DSM 4359)

2e-76

422) ACL_1089
( YP_001621075.1 )

surface-anchored NAD dependent sugar epimerase, putative

NC_010163
(Acholeplasma laidlawii PG-8A)

3e-76

423) wbpM
( NP_791581.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_004578
(Pseudomonas syringae DC3000)

3e-76

424) PSJM300_08115
( YP_006524049.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_018177
(Pseudomonas stutzeri DSM 10701)

4e-76

425) Echvi_0060
( YP_007222372.1 )

nucleoside-diphosphate sugar epimerase

NC_019904
(Echinicola vietnamensis DSM 17526)

4e-76

426) Nmul_A0631
( YP_411330.1 )

polysaccharide biosynthesis protein CapD

NC_007614
(Nitrosospira multiformis ATCC 25196)

4e-76

427) H681_23275
( YP_007660062.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_020829
(Pseudomonas denitrificans ATCC 13867)

4e-76

428) PSPPH_3656
( YP_275798.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_005773
(Pseudomonas syringae 1448A)

5e-76

429) BLASA_0347
( YP_005327373.1 )

Polysaccharide biosynthesis protein CapD-like

NC_016943
(Blastococcus saxobsidens DD2)

5e-76

430) PSEEN1506
( YP_607184.1 )

dTDP-glucose-4,6-dehydratase/UDP-glucose 4-epimerase WbpM

NC_008027
(Pseudomonas entomophila L48)

6e-76

431) GNIT_2482
( YP_004872572.1 )

polysaccharide biosynthesis protein

NC_016041
(Glaciecola nitratireducens FR1064)

9e-76

432) pglF
( YP_001489630.1 )

sugar epimerase/dehydratase

NC_009850
(Arcobacter butzleri RM4018)

1e-75

433) Rmag_0886
( YP_904072.1 )

polysaccharide biosynthesis protein CapD

NC_008610
(Candidatus Ruthia magnifica Cm)

1e-75

434) HEAR1151
( YP_001099457.1 )

UDP-glucose 4-epimerase; nucleotide sugar epimerase

NC_009138
(Herminiimonas arsenicoxydans )

2e-75

435) XALc_1597
( YP_003376086.1 )

sugar epimerase

NC_013722
(Xanthomonas albilineans GPE PC73)

2e-75

436) Dd1591_3389
( YP_003005684.1 )

polysaccharide biosynthesis protein CapD

NC_012912
(Dickeya zeae Ech1591)

3e-75

437) capD
( YP_004714777.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_015740
(Pseudomonas stutzeri ATCC 17588)

4e-75

438) B739_1123
( YP_006723621.1 )

nucleoside-diphosphate sugar epimerase

NC_018609
(Riemerella anatipestifer RA-CH-1)

5e-75

439) cap5D
( YP_006017922.1 )

Cap5D

NC_017569
(Riemerella anatipestifer RA-GD)

6e-75

440) CC1_04280
( YP_007768767.1 )

Predicted nucleoside-diphosphate sugar epimerases

NC_021009
(Coprococcus catus GD/7)

1e-74

441) Arnit_2539
( YP_003656695.1 )

polysaccharide biosynthesis protein CapD

NC_014166
(Arcobacter nitrofigilis DSM 7299)

2e-74

442) G148_0862
( YP_007355860.1 )

putative nucleoside-diphosphate sugar epimerase

NC_020125
(Riemerella anatipestifer RA-CH-2)

2e-74

443) FN1696
( NP_602512.1 )

UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase

NC_003454
(Fusobacterium nucleatum ATCC 25586)

2e-74

444) Hprae_0324
( YP_005835640.1 )

polysaccharide biosynthesis protein CapD

NC_017455
(Halanaerobium praevalens DSM 2228)

3e-74

445) wbpM
( YP_692648.1 )

polysaccharide biosynthesis protein

NC_008260
(Alcanivorax borkumensis SK2)

4e-74

446) Nhal_2428
( YP_003527903.1 )

polysaccharide biosynthesis protein CapD

NC_013960
(Nitrosococcus halophilus Nc 4)

7e-74

447) Saut_1486
( YP_003892545.1 )

polysaccharide biosynthesis protein CapD

NC_014506
(Sulfurimonas autotrophica DSM 16294)

1e-73

448) Flexsi_0362
( YP_004602618.1 )

polysaccharide biosynthesis protein CapD

NC_015672
(Flexistipes sinusarabici DSM 4947)

1e-73

449) Caka_1661
( YP_003548850.1 )

polysaccharide biosynthesis protein CapD

NC_014008
(Coraliomargarita akajimensis DSM 45221)

9e-74

450) H045_04735
( YP_007396519.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_020209
(Pseudomonas poae RE*1-1-14)

9e-74

451) XOO2185
( YP_200824.1 )

epimerase

NC_006834
(Xanthomonas oryzae KACC10331)

1e-73

452) XOO_2055
( YP_451084.1 )

epimerase

NC_007705
(Xanthomonas oryzae MAFF 311018)

1e-73

453) PXO_00896
( YP_001913564.1 )

epimerase

NC_010717
(Xanthomonas oryzae PXO99A)

1e-73

454) XOC_2688
( YP_005628965.1 )

epimerase

NC_017267
(Xanthomonas oryzae BLS256)

2e-73

455) XAC2293
( NP_642610.1 )

dehydratase

NC_003919
(Xanthomonas axonopodis 306)

2e-73

456) XAC29_11630
( YP_007636744.1 )

dehydratase

NC_020800
(Xanthomonas axonopodis Xac29-1)

2e-73

457) XCAW_01958
( YP_007649947.1 )

Nucleoside-diphosphate sugar epimerase

NC_020815
(Xanthomonas citri Aw12879)

2e-73

458) XACM_2301
( YP_004851862.1 )

nucleoside-diphosphate sugar epimerase

NC_016010
(Xanthomonas axonopodis F1)

3e-73

459) XCR_2457
( YP_005637450.1 )

epimerase

NC_017271
(Xanthomonas campestris 756C)

3e-73

460) XCV2491
( YP_364222.1 )

sugar epimerase

NC_007508
(Xanthomonas campestris 85-10)

3e-73

461) THA_1627
( YP_002335406.1 )

epimerase/dehydratase WbiI

NC_011653
(Thermosipho africanus TCF52B)

3e-73

462) Pfl01_4051
( YP_349779.1 )

polysaccharide biosynthesis protein CapD

NC_007492
(Pseudomonas fluorescens Pf0-1)

4e-73

463) XC_1929
( YP_243012.1 )

epimerase

NC_007086
(Xanthomonas campestris 8004)

4e-73

464) XCC2189
( NP_637545.1 )

epimerase

NC_003902
(Xanthomonas campestris ATCC 33913)

4e-73

465) xccb100_1991
( YP_001903396.1 )

hypothetical protein

NC_010688
(Xanthomonas campestris B100)

4e-73

466) F7308_0840
( YP_004647367.1 )

UDP-N-acetylglucosamine 4,6-dehydratase

NC_015696
(Francisella sp. TX077308)

5e-73

467) Riean_0761
( YP_004045431.1 )

polysaccharide biosynthesis protein capd

NC_014738
(Riemerella anatipestifer ATCC 11845)

1e-72

468) RA0C_0998
( YP_005394474.1 )

polysaccharide biosynthesis protein capd

NC_017045
(Riemerella anatipestifer ATCC 11845)

1e-72

469) SUN_0106
( YP_001357423.1 )

sugar epimerase/dehydratase

NC_009663
(Sulfurovum sp. NBC37-1)

2e-72

470) wbpM
( YP_261397.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_004129
(Pseudomonas protegens Pf-5)

2e-72

471) HMPREF0409_01491
( YP_008018598.1 )

hypothetical protein

NC_021281
(Fusobacterium sp. 4_8)

3e-72

472) CPF_0910
( YP_695359.1 )

capsular polysaccharide biosynthesis protein

NC_008261
(Clostridium perfringens ATCC 13124)

4e-72

473) Sdel_1769
( YP_003304819.1 )

polysaccharide biosynthesis protein CapD

NC_013512
(Sulfurospirillum deleyianum DSM 6946)

8e-72

474) SAR116_1965
( YP_003552292.1 )

polysaccharide biosynthesis protein CapD

NC_014010
(Candidatus Puniceispirillum marinum IMCC1322)

9e-72

475) Dd586_0670
( YP_003332268.1 )

polysaccharide biosynthesis protein CapD

NC_013592
(Dickeya dadantii Ech586)

1e-71

476) wbpM
( YP_006323222.1 )

nucleotide sugar epimerase/dehydratase WbpM

NC_017911
(Pseudomonas fluorescens A506)

1e-71

477) FNFX1_1468
( YP_005826376.1 )

hypothetical protein

NC_017450
(Francisella novicida Fx1)

9e-72

478) Fphi_1243
( YP_001677969.1 )

dTDP-glucose 4,6-dehydratase

NC_010336
(Francisella philomiragia ATCC 25017)

2e-71

479) Veis_4862
( YP_999570.1 )

polysaccharide biosynthesis protein CapD

NC_008786
(Verminephrobacter eiseniae EF01-2)

3e-71

480) Fnod_1494
( YP_001410994.1 )

polysaccharide biosynthesis protein CapD

NC_009718
(Fervidobacterium nodosum Rt17-B1)

5e-71

481) F92_03230
( YP_007008754.1 )

NAD dependent epimerase/dehydratase family protein

NC_019537
(Francisella tularensis F92)

6e-71

482) wbtA
( YP_007011581.1 )

dTDP-glucose 4,6-dehydratase

NC_019551
(Francisella tularensis FSC200)

6e-71

483) FTA_0626
( YP_001428058.2 )

NAD dependent epimerase/dehydratase family protein

NC_009749
(Francisella tularensis FTNF002-00)

6e-71

484) FTL_0592
( YP_513352.1 )

dTDP-glucose 4,6-dehydratase

NC_007880
(Francisella tularensis LVS)

6e-71

485) FTH_0592
( YP_763193.1 )

dTDP-glucose 4,6-dehydratase

NC_008369
(Francisella tularensis OSU18)

6e-71

486) wbtA
( YP_667533.1 )

dTDP-glucose 4,6-dehydratase

NC_008245
(Francisella tularensis FSC 198)

1e-70

487) NE061598_08175
( YP_005831586.1 )

dTDP-glucose 4,6-dehydratase

NC_017453
(Francisella tularensis NE061598)

1e-70

488) wbtA
( YP_170401.1 )

dTDP-glucose 4,6-dehydratase

NC_006570
(Francisella tularensis SCHU S4)

1e-70

489) wbtA
( YP_001121460.1 )

NAD dependent epimerase/dehydratase family protein

NC_009257
(Francisella tularensis WY96-3418)

7e-71

490) wbtA
( YP_001892099.1 )

dTDP-glucose 4,6-dehydratase

NC_010677
(Francisella tularensis FSC147)

1e-70

491) wbtA
( YP_005318525.1 )

UDP-N-acetylglucosamine 4 6-dehydratase

NC_016937
(Francisella tularensis TI0902)

1e-70

492) wbtA
( YP_005306071.1 )

UDP-N-acetylglucosamine 4 6-dehydratase

NC_016933
(Francisella tularensis TIGB03)

1e-70

493) Cgl0347
( NP_599598.1 )

nucleoside-diphosphate sugar epimerase

NC_003450
(Corynebacterium glutamicum ATCC 13032)

3e-70

494) CapD
( YP_007559600.1 )

predicted nucleoside-diphosphate sugar epimerase

NC_020519
(Corynebacterium glutamicum ATCC 13032)

3e-70

495) capD
( YP_224647.1 )

dTDP-glucose 4,6-dehydratase transmembrane protein

NC_006958
(Corynebacterium glutamicum ATCC 13032)

3e-70

496) capD
( YP_008400491.1 )

putative dTDP-glucose 4,6-dehydratase, transmembrane protein

NC_022040
(Corynebacterium glutamicum MB001)

3e-70

497) Noca_4184
( YP_925368.1 )

polysaccharide biosynthesis protein CapD

NC_008699
(Nocardioides sp. JS614)

4e-70

498) Weevi_1083
( YP_004238370.1 )

polysaccharide biosynthesis protein CapD

NC_015144
(Weeksella virosa DSM 16922)

3e-69

499) RSal33209_1438
( YP_001624588.1 )

UDP-D-quinovosamine 4-dehydrogenase

NC_010168
(Renibacterium salmoninarum ATCC 33209)

9e-69

500) TREPR_2356
( YP_004530716.1 )

capsular polysaccharide biosynthesis protein

NC_015578
(Treponema primitia ZAS-2)

1e-68

501) Hore_16980
( YP_002509442.1 )

nucleoside-diphosphate sugar epimerase

NC_011899
(Halothermothrix orenii H 168)

2e-68

502) Snov_3217
( YP_003695111.1 )

polysaccharide biosynthesis protein CapD

NC_014217
(Starkeya novella DSM 506)

5e-68

503) TREAZ_0660
( YP_004527191.1 )

putative epimerase/dehydratase WbiI

NC_015577
(Treponema azotonutricium ZAS-9)

8e-68

504) BHWA1_01906
( YP_002722073.1 )

polysaccharide biosynthesis protein

NC_012225
(Brachyspira hyodysenteriae WA1)

1e-67

505) Bint_2797
( YP_005595971.1 )

polysaccharide biosynthesis protein

NC_017243
(Brachyspira intermedia PWS/A)

4e-67

506) TPE_2560
( YP_008436168.1 )

capsular polysaccharide biosynthesis protein

NC_022097
(Treponema pedis T A4)

6e-66

507) PGLF
( NP_906308.1 )

sugar epimerase/dehydratase

NC_005090
(Wolinella succinogenes DSM 1740)

6e-66

508) TDE0714
( NP_971326.1 )

capsular polysaccharide biosynthesis protein

NC_002967
(Treponema denticola ATCC 35405)

2e-65

509) BP951000_1375
( YP_003785863.1 )

capsular polysaccharide biosynthesis protein

NC_014330
(Brachyspira pilosicoli 95/1000)

5e-65

510) B2904_orf2613
( YP_006708682.1 )

capsular polysaccharide biosynthesis protein

NC_018607
(Brachyspira pilosicoli B2904)

5e-65

511) BPP43_08200
( YP_007235092.1 )

capsular polysaccharide biosynthesis protein

NC_019908
(Brachyspira pilosicoli P43/6/78)

5e-65

512) WESB_0185
( YP_006702745.1 )

capsular polysaccharide biosynthesis protein

NC_018604
(Brachyspira pilosicoli WesB)

5e-65

513) Mlg_0801
( YP_741645.1 )

polysaccharide biosynthesis protein CapD

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

2e-62

514) Tresu_1065
( YP_004365278.1 )

polysaccharide biosynthesis protein CapD

NC_015385
(Treponema succinifaciens DSM 2489)

3e-62

• Sequence Alignments

1) SSP0063 in NC_007350


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  961 bits (3642),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 611/611 (100%), Positives = 611/611 (100%), Gaps = 0/611 (0%)

Query  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVlilsslillisHHVFAQ  60
            MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120
            IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180
            GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  181  KMSIASGVKVQGCIKDIPELVkkfnikkiiiaiPTLSQQRLREINKLCEGTNVEVFKMPN  240
            KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300
            IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360
            VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420
            VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480
            SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIR  540
            FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIR
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIR  540

Query  541  SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNN  600
            SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNN
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNN  600

Query  601  NKTGEEKCKMD  611
            NKTGEEKCKMD
Sbjct  601  NKTGEEKCKMD  611

2) capD in NC_012121


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  700 bits (2646),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 419/589 (72%), Positives = 527/589 (90%), Gaps = 0/589 (0%)

Query  8    QQRLIFFLIIDSLIVAFSVFLSYSILEPYFRGYsltllilsslvllcsHHIFASVFNLYH  67
            +QR++ +L+IDS+IV+FSVFL+Y ILEP+F+GYS+ +LILSSL+LL SHH+FA +F+LYH
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  68   RAWEYASINEMFVIVKAVTCSMALTVLIVPFFTHEGPFLRLYFITWMMHILLIGGSRLSW  127
            RAWEYAS++E+++IVK+VT S+  T +IVP+FT+++PFLRLYFITWMMH+LLIGGSRLSW
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  128  RIFNRTVNRRGRKSKNTLVIGAGAGGSMLVQQMLKRPGMGMEPVLAVDDDPNKQKLTITE  187
            RI+ +T   +  K K TL++G+G GGS+L++QM++ P MGMEPVL VDDD+NKQK++I+ 
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  188  GVKVQGKIEDVPDLVRKYRikkiiiaiPTLSQKRLREINEICENLGVTVLKMPNIEEVMS  247
            GVKVQG I D+P+LV+K+ IKKIIIAIPTLSQ+RLREIN +CE   V V+KMPNIE+VMS
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  248  GELEVNQLKKVEVEDLLGRDPVELDMQLISKELTHQTIMVTGAGGSIGSEICQQVCRFAP  307
            GE+EVN+LKKVEVEDLLGRDPVELDM  ISKELTH+TI+VTGAGGSIGSEIC+QVC+F+P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  308  ARIILLGHGENSIYLIHQELQKQYGDQIDIVPVIADIQDRSRMFKILDHYQPYVVYHAAA  367
             RI+LLGHGENSIY IHQEL   Y ++I+++P+IAD+QD+ RM K+++ Y+PYVVYHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  368  HKHVPMMEYNPSEAIKNNVMGTKNTAEAARHARVSKFVMISTDKAVNPPNVMGASKRAAE  427
            HKHVP+MEYNP EAIKNNV+GT+NTAEAA+ A VSKFVM+STDKAVNPPNVMGASKR AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  428  MIVQSMNEDNCKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPITVTHPDITRYFMTIPE  487
            M++QSMN++  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP+TVTHP++TRYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  488  AARLVLQAGAIAEGGEVFVLDMGEPVKIVDLAKNLIRLSGYKDGDIEIQFTGLRPGEKLY  547
            A+RLVLQAGA+A GGE+FVLDMG PVKIVDLAKNLIRLSGYK+ DI I+F+G+R+GEKL+
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  548  eelldedeIHPEQVYEKIYRGKVETMKNDDVLRILDEIIHSKDYKQKLI  596
            EELL+ DEIHPEQVYEKIYRGKV+ + ++++   +D+++ +   ++ +I
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

3) SLGD_00326 in NC_013893


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  654 bits (2471),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 437/595 (74%), Positives = 532/595 (90%), Gaps = 1/595 (0%)

Query  1    MNKLNARVRLFALIIIDSLIVAFSVFICYNILEPFFKGYANKililtsillliAHHVFAY  60
            M+ ++ + R+  L++IDS+IV+FSVF+ Y ILEPFFKGY+ ++LIL+S++LLI+HHVFA 
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  61   IFNLYHRAWEYASVNELLIIVESVTCSILATVILVPVFTGHPPFFRLYLITWMMVLILIG  120
            IF+LYHRAWEYASV+EL++IV SVT SI+AT I+VP+FT ++PF+RLY+ITWMM L+LIG
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  121  GSRISWRVTRKFVVGKHQKKKPTLIVGAGRGGSLLIRQMLRSPEMGLEPVLAVDDDPQKR  180
            GSR+SWR+ RK  ++K+ KKKPTLIVG+GRGGSLLIRQM+ +P MG+EPVL VDDD++K+
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  181  KLTIADGVKVQGTIDDIPNLVNKFRIKRIIIAIPTLKPNRLKEINDICNSTGIELFKMPS  240
            K++IA GVKVQG I DIP+LV+KF IK+IIIAIPTL  +RL+EIN +C++T +E+FKMP+
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  241  IEQVLVGELEVNQLKRVEVEDLLGREPVELDMAMISKELTHKTIMVTGAGGSIGSEICRQ  300
            IE+V+ GE+EVN+LK+VEVEDLLGR+PVELDMA ISKELTHKTI+VTGAGGSIGSEICRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  301  VCKFEPDCILLLGHGENSIYLIHQELNaiykdkiriipiiadVQNPERIQDVMNRykpya  360
            VCKF PD I+LLGHGENSIY IHQEL ++YK+ I +IPIIADVQ+ ER++ VM+ YKPY 
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  361  vyhaaahkhvpLMEYNPIEAFRNNVLGTRNVAIAAKTAGVRKFVMISTDKAVNPPNVMGA  420
            VYHAAAHKHVPLMEYNP EA++NNVLGTRN A AAK A V KFVM+STDKAVNPPNVMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  421  SKRLAEMVVQSLNEENSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPDMTRY  480
            SKR+AEMV+QS+N+E SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP+MTRY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  481  FMTIPEASRLVLQAGALAQGGEIFVLDMGEPVKIVDLAKNLIRLSGKSEDDIQIKFTGIR  540
            FMTIPEASRLVLQAGALA GGEIFVLDMG PVKIVDLAKNLIRLSG  E+DI I F+GIR
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIR  540

Query  541  PGEKMYEELLNENEIHPEQVYEKIYRGKVRNFSKDEVEAIIND-LVKDFKKEKII  594
            +GEK++EELLN +EIHPEQVYEKIYRGKV+++ K+E+   I+D L+++  ++ II
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

4) capD in NC_007168


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  641 bits (2423),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 426/575 (75%), Positives = 511/575 (89%), Gaps = 1/575 (0%)

Query  21   VAFSVFICYNILEPFFEGYSRDllivnsivllisHHVFAYIFNLYHRAWEYASVNELLLI  80
            V+FSVF+ Y ILEPFF GYS ++LI++S++LLISHHVFA IF+LYHRAWEYASV+EL+LI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VESVTCSIITTMILVPIFTAHPPFFRLYLITWMMHLILIGGSRISWRVARGFVVGKKLKK  140
            V SVT SI++T I+VPIFT ++PF+RLY+ITWMMHL+LIGGSR+SWR+ R   ++K  KK
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLIVGAGRGGSLLIRQMLRSPEMGLEPVLVVDDDPQKKKLTIAEGVKVQGSIDDIPNL  200
            KPTLIVG+GRGGSLLIRQM+ +P MG+EPVLVVDDD++K+K++IA GVKVQG I DIP+L
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VNKYRIKRIIIAIPTLKPDRLKEINNICNSTGIELFKMPSIEQVLVGELEVNQLKRVEVE  260
            V+K+ IK+IIIAIPTL  +RL+EIN++C++T +E+FKMP+IE+V+ GE+EVN+LK+VEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGREPVELDMAMISKELTHKTIMITGAGGSIGSEICRQVCKFEPERILLLGHGENSIY  320
            DLLGR+PVELDMA ISKELTHKTI++TGAGGSIGSEICRQVCKF P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LIHQELNaiykdkieiipiiadVQNGDRIQEIMDkykpyavyhaaahkhvpLMEYNPIEA  380
             IHQEL ++YK+ IE+IPIIADVQ+ +R++ +M+ YKPY VYHAAAHKHVPLMEYNP EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  FKNNVLGTRNVATVAKNVGVRKFVMVSTDKAVNPPNVMGASKRVAEMVVQSLNDENCVTD  440
            +KNNVLGTRN A  AK   V KFVMVSTDKAVNPPNVMGASKRVAEMV+QS+N+E   TD
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKKQIAAGGPVTVTHPDMTRYFMTIPEASRLVLQAGALAKG  500
            FVAVRFGNVLGSRGSVIPLFKKQI AGGPVTVTHP+MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIRLSGKTEDEIPIKFSGIRPGEKMYEELLNENEIHPEQV  560
            GE+FVLDMG PVKIVDLA+NLIRLSG  E++I I FSGIR+GEK++EELLN +EIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  YEKIYRGKVRDFSKEEVDAIVSD-LANDFKKEKII  594
            YEKIYRGKV+ + KEE+   + D L N+  ++ II
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

5) SAMSHR1132_01260 in NC_016941


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  626 bits (2365),  Expect = 2e-180, Method: Compositional matrix adjust.
 Identities = 414/586 (71%), Positives = 517/586 (89%), Gaps = 1/586 (0%)

Query  21   VTVSVFVSYYILEPYFKTYSVKLLILAAVSLFISHHISAFIFNMYHRAWEYASVSELILI  80
            VT SVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmivvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T I+V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KTTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            K TL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VkkykikkiiiaiPTIGQGRLKEINNICHLDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            VKK++IKKIIIAIPT++Q RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISKELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  ISKELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKHFDIVPVIADVQNRARMFEIMDQykpyavyhaaahkhvpLMEYNPEEA  380
             I++EL   +  +++++P+IADVQ++ RM  +M+ YKPY VYHAAAHKHVPLMEYNP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKHAGVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTD  440
            ++NN+LGT+NTAEAAK A V KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +TD
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEAGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIEAGGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEEDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KEEDI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  YEKIYRGKVKHMTSNQVEAIIQD-IVNDFSKEKIINYANGKKGNND  605
            YEKIYRGKV+ +  +++   I+D ++N+  ++ II + N +K  ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGEE  606

6) CA347_163 in NC_021554


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  622 bits (2349),  Expect = 3e-179, Method: Compositional matrix adjust.
 Identities = 414/585 (71%), Positives = 521/585 (90%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEAGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIEAGGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEIHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMQCNEVNAIIQD-IVNDFSKEKIINYANGEKGDN  604
            +EKIYRGKVQ ++ +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

7) SAS0127 in NC_002953


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  620 bits (2343),  Expect = 8e-179, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 520/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEENPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

8) cap8D in NC_003923


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  620 bits (2343),  Expect = 8e-179, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 520/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEENPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

9) cap5D in NC_002951


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  620 bits (2343),  Expect = 9e-179, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 520/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

10) SAOUHSC_00117 in NC_007795


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  620 bits (2343),  Expect = 9e-179, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 520/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

11) SAVC_00530 in NC_016912


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  620 bits (2343),  Expect = 9e-179, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 520/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

12) capD in NC_009641


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2340),  Expect = 1e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 520/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

13) capD in NC_017340


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

14) SAAG_00635 in NC_022113


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2338),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 413/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvfvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I F+GIR+GEK++EEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

15) ECTR2_109 in NC_017343


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

16) cap5D in NC_013450


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

17) SaurJH9_0138 in NC_009487


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

18) M013TW_0142 in NC_016928


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2338),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 413/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNIDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +I+++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

19) capD in NC_009782


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

20) capD in NC_002758


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

21) capD in NC_002745


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

22) SAPIG0166 in NC_017333


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2337),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGEIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

23) SAT0131_00142 in NC_017347


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2338),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 413/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvfvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I F+GIR+GEK++EEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

24) capD in NC_017331


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  619 bits (2338),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 413/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvfvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I F+GIR+GEK++EEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

25) capD in NC_018608


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2336),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGEIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

26) MS7_0146 in NC_017351


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2336),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

27) capD in NC_022222


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2336),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 413/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNIDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +I+++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

28) capD in NC_021670


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2336),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 413/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvfvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I F+GIR+GEK++EEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

29) SAOV_0099 in NC_017337


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2336),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 411/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDEIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE++I I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

30) cap5D in NC_017338


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2336),  Expect = 3e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

31) SaurJH1_0143 in NC_009632


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

32) SAI1T1_2001070 in NC_020529


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

33) SAI2T2_1001070 in NC_020564


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

34) SAI3T3_1001070 in NC_020532


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

35) SAI4T8_1001070 in NC_020533


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

36) SAI7S6_1001070 in NC_020537


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

37) SAI5S5_1001060 in NC_020566


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

38) SAI6T6_1001070 in NC_020536


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

39) SAI8T7_1001070 in NC_020568


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  618 bits (2335),  Expect = 4e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  25   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  84
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  85   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  144
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  145  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  204
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  205  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  264
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  265  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  324
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  325  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMETykpyavyhaaahkhvpLMEDNPEEA  384
             I++EL   +  +++++PIIADVQ++ RM  +M++YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  385  VHNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  444
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  445  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  504
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  505  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  564
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  565  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  608
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

40) ST398NM01_0166 in NC_017673


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  617 bits (2333),  Expect = 5e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  52   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  111
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  112  VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  171
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  172  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGEIADIPEL  231
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  232  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  291
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  292  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  351
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  352  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  411
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  412  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  471
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  472  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  531
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  532  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  591
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  592  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  635
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

41) cap5D in NC_017341


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  617 bits (2333),  Expect = 5e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  1    MTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  60
            +TFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  61   VKAvttsivitmvfvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  120
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  121  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  180
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  181  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  240
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  241  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  300
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  301  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  360
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  361  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  420
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  421  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  480
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  481  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV  540
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I F+GIR+GEK++EEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  541  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  584
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

42) capD in NC_017342


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  617 bits (2333),  Expect = 5e-178, Method: Compositional matrix adjust.
 Identities = 413/585 (71%), Positives = 518/585 (89%), Gaps = 1/585 (0%)

Query  50   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  109
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  110  VKAvtisivitmvfvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  169
            VK+VT SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  170  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  229
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  230  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  289
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  290  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  349
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  350  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  409
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  410  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  469
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  470  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  529
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  530  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV  589
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I F+GIR+GEK++EEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  590  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  633
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

43) capD in NC_017349


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  617 bits (2332),  Expect = 6e-178, Method: Compositional matrix adjust.
 Identities = 410/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGKDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLG+DPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMERykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDEIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE++I I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

44) capD in NC_002952


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  617 bits (2332),  Expect = 6e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvfvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRKMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIR+M+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I F+GIR+GEK++EEL+NKDEIHPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

45) capD in NC_017763


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  617 bits (2331),  Expect = 7e-178, Method: Compositional matrix adjust.
 Identities = 412/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGEIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNRARMFEILEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ++ RM  +++ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHQTN  440
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRSGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIRSGEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

46) SAKOR_00132 in NC_022226


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  615 bits (2324),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 411/585 (71%), Positives = 519/585 (89%), Gaps = 1/585 (0%)

Query  52   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  111
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  112  VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  171
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  172  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  231
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  232  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  291
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  292  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  351
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  352  LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  411
             I++EL   +  +++++PIIADVQ++ RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  412  VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  471
            ++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  472  FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAED  531
            FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA +
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  532  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  591
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  592  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYGNGKKGDN  635
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

47) capD in NC_007622


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  613 bits (2315),  Expect = 1e-176, Method: Compositional matrix adjust.
 Identities = 411/585 (71%), Positives = 516/585 (89%), Gaps = 1/585 (0%)

Query  21   VTFSVFVSYYILEPYFKTYSVKllilaaislfisHHISAFIFNMYHRAWEYASVSELILI  80
            VTFSVF++YYILEP+FK YS+++LIL+++ L+ISHH+ A IF++YHRAWEYASVSELILI
Sbjct  21   VTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSELILI  80

Query  81   VKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK  140
            VK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSRL WRIYRK + +K  +K
Sbjct  81   VKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK  140

Query  141  KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL  200
            KPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++I+ GVKVQG I DIPEL
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  201  VRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE  260
            V+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+VMSGE+EVN+LKKVEVE
Sbjct  201  VKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVE  260

Query  261  DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY  320
            DLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+F P+RI+LLGHGENSIY
Sbjct  261  DLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIY  320

Query  321  LINRELRNRFGKNVDIVPIIADVQNSARMFEIMEMykpyavyhaaahkhvpLMEDNPEEA  380
             I++EL   +  +++++PIIADVQ+  RM  +M+ YKPY VYHAAAHKHVPLME NP+EA
Sbjct  321  HIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEA  380

Query  381  VCNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN  440
            + NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR+AEM+IQS+N+ET +T+
Sbjct  381  IKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD  440

Query  441  FVVVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG  500
            FV VRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMTIPEASRLVLQAGALA G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  501  GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQV  560
            GE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GEK+FEEL+NKDE+HPEQV
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQV  560

Query  561  FEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKGDN  604
            +EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K ++
Sbjct  561  YEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKTGE  605

48) MCCL_0670 in NC_011999


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  596 bits (2250),  Expect = 2e-171, Method: Compositional matrix adjust.
 Identities = 379/597 (64%), Positives = 500/597 (84%), Gaps = 1/597 (0%)

Query  1    MTAKKRLMFLIFLDSIIVSLSVFFCYSIIFPFFKGNQLNDllvysvllllshhlFAYIFN  60
            ++ K+R+M L+F+DSIIV++SVF+ Y I+ PFFKG  +N L++ S++LL+SHH+FA IF+
Sbjct  4    ISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFD  63

Query  61   LYHRAWEYASINELLAIVKGVTAsiiltsilsliiNGQV-FIRLIFITWMMHLILIGGSR  119
            LYHRAWEYAS++EL+ IVK+VT+SI+ T+I+  I+  Q  F+RL FITWMMHL+LIGGSR
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  120  ISWRVLRRHILDKDIELIPTLVVGAGRGGNLLIHQMLSTPTMEMKPvvvvdddINKKNIE  179
            +SWR+ R+ ++ K+    PTL+VG+GRGG+LLI+QM++TP M M PV+VVDDD NK+++ 
Sbjct  124  LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  180  LTDGIKVKGTTEDIHSLVTKYDIKRIVIAIPSLDKQKLNDIHKAATETGSEVLIMPNIDD  239
            ++ G+KV+G   DI  LV K++IK+I+IAIP+L +Q+L +I+K    T  EV+ MPNI++
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  240  VMAGKLEVSQLKKVEVEDLLGRDPIELDDQGILEQIEGKTILVTGAGGSIGSELCRQIVK  299
            VM+G +EV++LKKVEVEDLLGRDP+ELD  +I  ++  KTILVTGAGGSIGSE+CRQ+ K
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  300  YKPRRLVVLGHGENSIYLINEELNNKLLGSVEIIPIIADVQDRERMFKQMLKYKPDIVYH  359
            + P R+++LGHGENSIY I++EL       +E+IPIIADVQD+ERM K M  YKP +VYH
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  360  AAAHKHVPLMEYNSTEAVKNNIIGTKNTAEAALNASVKRFVLVSTDKAVNPPNVMGATKR  419
            AAAHKHVPLMEYN+ EA+KNN++GT+NTAEAA  A V +FV+VSTDKAVNPPNVMGA+KR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  420  MAEMVIQALDTQSKTTRFVAVRFGNVLGSRGSVIPKFKQQIEAGGPVTVTHPDMTRYFMT  479
            +AEMVIQ+++ ++  T FVAVRFGNVLGSRGSVIP FK+QIEAGGPVTVTHP+MTRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  480  IPEASRLVIQAGALANGGEIFVLDMGEPVKIVNLAKNMIKLSGFSEEDIKIEFSGIRPGE  539
            IPEASRLV+QAGALA GGEIFVLDMG PVKIV+LAKN+I+LSG+ EEDI IEFSGIR+GE
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGE  543

Query  540  KLFEELLDADEIHPEQIYPKIYIGKANEINIADLENIIPKILKSNNLKEDLLNFIKK  596
            KLFEELL+ DEIHPEQ+Y KIY GK + I+  +L N I  +L +++++++++ F+++
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNN  600

49) capD in NC_022443


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  582 bits (2198),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 386/542 (72%), Positives = 480/542 (89%), Gaps = 1/542 (0%)

Query  1    MYHRAWEYASVSELILIVKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSR  60
            +YHRAWEYASVSELILIVK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSR
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  61   LFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNIT  120
            L WRIYRK + +K  +KKPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++
Sbjct  124  LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  121  ITEGVKVQGKIADIPELVRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIED  180
            I+ GVKVQG I DIPELV+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  181  VMSGELEVNQLKKVEVEDLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCN  240
            VMSGE+EVN+LKKVEVEDLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  241  FYPERIILLGHGENSIYLINRELRNRFGKNIDIVPIIADVQNRARMFEIMEMykpyavyh  300
            F P+RI+LLGHGENSIY I++EL   +  +I+++PIIADVQ++ RM  +M+ YKPY VYH
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  301  aaahkhvpLMEDNPEEAVRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKR  360
            AAAHKHVPLME NP+EA++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  361  IAEMIIQSLNDETHRTNFVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMT  420
            +AEM+IQS+N+ET +T+FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  421  IPEASRLVLQAGALAEGGEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGE  480
            IPEASRLVLQAGALA GGE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GE
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGE  543

Query  481  KMFEELMNKDEVHPEQVFEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKG  539
            K+FEEL+NKDE+HPEQV+EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K 
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKT  603

Query  540  DN  541
            ++
Sbjct  604  GE  605

50) capD in NC_022442


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  582 bits (2198),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 386/542 (72%), Positives = 480/542 (89%), Gaps = 1/542 (0%)

Query  1    MYHRAWEYASVSELILIVKAvttsivitmvvvtivtGNRPFFRLYLITWMMHLILIGGSR  60
            +YHRAWEYASVSELILIVK+VT+SIV T ++V I T + PF+RLY+ITWMMHL+LIGGSR
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  61   LFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNIT  120
            L WRIYRK + +K  +KKPTL+VG+G++GS+LIRQM+++  M +EPVL VDDD +K++++
Sbjct  124  LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  121  ITEGVKVQGKIADIPELVRkykikkiiiaiptiGQERLKEINNICHMDGVELLKMPNIED  180
            I+ GVKVQG I DIPELV+K++IKKIIIAIPT++Q+RL+EIN++C+   VE++KMPNIE+
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  181  VMSGELEVNQLKKVEVEDLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCN  240
            VMSGE+EVN+LKKVEVEDLLGRDPVELDM  IS+ELT+KTILVTGAGGSIGSEICRQVC+
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  241  FYPERIILLGHGENSIYLINRELRNRFGKNIDIVPIIADVQNRARMFEIMEMykpyavyh  300
            F P+RI+LLGHGENSIY I++EL   +  +I+++PIIADVQ++ RM  +M+ YKPY VYH
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  301  aaahkhvpLMEDNPEEAVRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKR  360
            AAAHKHVPLME NP+EA++NN+LGT+NTAEAAK AEV KFVM+STDKAVNPPNVMGASKR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  361  IAEMIIQSLNDETHRTNFVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMT  420
            +AEM+IQS+N+ET +T+FVAVRFGNVLGSRGSVIPLFK QIE GGPVTVTHP MTRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  421  IPEASRLVLQAGALAEGGEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGE  480
            IPEASRLVLQAGALA GGE+FVLDMG PVKIVDLA+NLI+LSG KE+DI I ++GIR+GE
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGE  543

Query  481  KMFEELMNKDEVHPEQVFEKIYRGKVQHMKCNEVEAIIQD-IVNDFSKEKIINYANGKKG  539
            K+FEEL+NKDE+HPEQV+EKIYRGKVQ +  +E+   I+D ++N+  ++ II + N +K 
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNNKT  603

Query  540  DN  541
            ++
Sbjct  604  GE  605

51) capD'' in NC_012121


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  554 bits (2093),  Expect = 3e-159, Method: Compositional matrix adjust.
 Identities = 346/458 (76%), Positives = 416/458 (91%), Gaps = 1/458 (0%)

Query  1    MVVGAGRGGYFLIRQMLTTSNMGLEPVLAVDDDPNKQNISITMGVKVQGYINDIPELVNk  60
            ++VG+GRGG +LIRQM+ T+ MG+EPVL VDDD+NKQ++SI+ GVKVQG I+DIPELV+K
Sbjct  144  LIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKK  203

Query  61   fkikkiiiaiPTLSQKRLREITELCKNLNVEVLIMPDIESVMTGELEVNQLKKVDVEDLL  120
            F+IKKIIIAIPTLSQ+RLREI  LC   NVEV+ MP+IE+VM+GE+EVN+LKKV+VEDLL
Sbjct  204  FNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLL  263

Query  121  GRDPVELDMKMISEELTNKTILVTGAGGSIGSEICRQVCKFAPKKIVLLGHGENSIYLIH  180
            GRDPVELDM  IS ELT+KTILVTGAGGSIGSEICRQVCKF+P +I+LLGHGENSIY IH
Sbjct  264  GRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIH  323

Query  181  RELLKQYRDEIEIVPVIADVQDRERIMNVMKTHKPYFVYHAAAHKHVPMMEYNPEEAVKN  240
            +EL+  Y++EIE++P+IADVQD+ER+ +VM++ KPY VYHAAAHKHVP+MEYNP+EA+KN
Sbjct  324  QELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKN  383

Query  241  NVIGTKNAAESAQLAEVSKFVMISTDKAVNPPNVMGASKRIAEMIIQNLNTRPGNTDFVA  300
            NV+GT+N+AE+A+LAEVSKFVM+STDKAVNPPNVMGASKR+AEM+IQ++N   ++TDFVA
Sbjct  384  NVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVA  443

Query  301  VRFGNVLGSRGSVIPLFKEQIAAGGPVTVTHPEMTRYFMTIPEAARLVLQAGALATGGEI  360
            VRFGNVLGSRGSVIPLFK QI AGGPVTVTHP MTRYFMTIPEA+RLVLQAGALATGGEI
Sbjct  444  VRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEI  503

Query  361  FVLDMGEPVKIVDLAKNLIRLSGFKEEDIDIEFSGVRPGeklyeellnekeIHPEQVYEK  420
            FVLDMG PVKIVDLAKNLIRLSG+KEEDI+IEFSG+R+GEKL+EELLN  EIHPEQVYEK
Sbjct  504  FVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEK  563

Query  421  IYRGKVTSVDTESL-NRILDILLNHFTKQQIINIANGK  457
            IYRGKV  ++ E L N+I D+L+N+  +++II + N +
Sbjct  564  IYRGKVQKIEKEELYNKIDDFLINESVRDEIIFFVNNN  601

52) M493_17345 in NC_022080


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  548 bits (2070),  Expect = 3e-157, Method: Compositional matrix adjust.
 Identities = 335/592 (57%), Positives = 470/592 (80%), Gaps = 7/592 (1%)

Query  4    RKRLTFLMVLDSLIVLTAIYVSLFTLHPGIQIWKYKsvllsaltllvsHHFFAFIYRLYQ  63
            ++R+  L+ +DS+IV  +++++ + L+P ++    + ++LS+L LL+SHH FA I+ LY+
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KAWEYASIGELTAIIKAVTFSIITTAIVQFAVF--QDIYVRALMITWMIHIILIGGSRFV  121
            +AWEYAS++EL  I+K+VT SI++T+I+  ++F  Q  ++R   ITWM+H++LIGGSR+ 
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLS  125

Query  122  WRVFRDRYIKPNANKRRTLIIGAGSAGMMVARQLVNNPDAELRPIAFIDDDLNKQKLQFF  181
            WR++R  +I  +++K+ TLI+G+G +G ++ RQ++N P   + P+  +DDD NKQK+ + 
Sbjct  126  WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIA  185

Query  182  N-IPVVGTTKDIEDVVRALRIEHIIIAIPSLTKKQLNRIFEQCAKTNAKTQIVPKLEDIV  240
            + + V G  KDI ++V+ + I  IIIAIP+L++++L  I   C  TN     +P++E+++
Sbjct  186  SGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVM  245

Query  241  TGKVSVSQFRDVQVEDLLGREPVELDIESISSYIENKVILVTGAGGSIGSEICRQVCQFN  300
            +G + V++++ V+VEDLLGR+PVELD+ SIS  + +K ILVTGAGGSIGSEICRQVC+F 
Sbjct  246  SGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFT  305

Query  301  PKKIVLLGHGENSIYQIDMELRNQYKDQIDIVPVIGDIQDRERMFEVMEEHKPDVVYHAA  360
            P +I+LLGHGENSIY+I+ EL   YK++I+++P+I+D+QD+ERM  VM+  KP VVYHAA
Sbjct  306  PDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAA  365

Query  361  AHKHVPLMEYNPKEAVKNNIFGTKNVAEAADTFGVQTFVLISTDKAVNPTNVMGATKRFA  420
            AHKHVPLMEYNP+EA+KNN++GT+N AEAA    V  FV++STDKAVNP NVMGA+KR A
Sbjct  366  AHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVA  425

Query  421  EMIIQQLDKQ-SKTKFVAVRFGNVLGSRGSVIPLFKKQIQAGGPVTVTHPDMTRYFMTIP  479
            EM+IQ ++++ SKT FVAVRFGNVLGSRGSVIPLFKKQI+AGGPVTVTHP+MTRYFMTIP
Sbjct  426  EMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIP  485

Query  480  EASRLVIQAGALAKGGEIFVLDMGEPVKIVDLAKNLIKLSGYTVEEIGIEFTGIRPGEKM  539
            EASRLV+QAGALA GGEIFVLDMG PVKIVDLAKNLI+LSGY  E+IGIEF+GIR+GEK+
Sbjct  486  EASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKL  545

Query  540  FEELLNENEVHPEQVFPKIFIGKATAVDEKILHDFMDRFEEMDKEEVRERLL  591
            FEELLN +E+HPEQV+ KI+ GK   ++   L + +D F  + +E VR+ ++
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEII  595

53) BCAH187_A5448 in NC_011658


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  527 bits (1987),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 323/591 (55%), Positives = 463/591 (79%), Gaps = 4/591 (0%)

Query  4    RKRLSLLILLDSFIVLTAVYLSYWFIHPNILSKIPTTVIISSITLLCSHHIFAAIYKLYN  63
            ++R+ +L+++DS+IV  +V+L+Y +++P + +     +I+SS+ LL SHH+FA I+ LY+
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KAWEYASIGELKQIFKAITLSIIVTAIVQQIINHDI-YVRILAIAWMLHLLLIGGSRFVW  122
            +AWEYAS++EL  I K++T SI+ T+I+  I+ ++  ++R+  I+WM+HLLLIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RMFRDTYITKAADKKRTLIIGAGSAGTMVVRQLQHNKEADLYPVAFVDDDRNKQKLEI-Y  181
            R++R T+I+K + KK TLI+G+G +G++++RQ+ +    ++ PV  VDDD NKQK+ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  182  NVPVVGTTNHIQEIVENNDIEHIIIAIPSLNRNQINEIFEKCRKTKAKTQIVPMLEDLLD  241
             V V G  ++I E+V + +I  IIIAIP+L+++++ EI   C  T+     +P +E+++ 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  242  GKVSVNEFRDVQVEDLLGREPIQLDDAGIGEKITGKTILVTGAGGSIGSEICRQVMKYKP  301
            G + VN ++ V+VEDLLGR+P++LD A+I+  +T KTILVTGAGGSIGSEICRQV K+ P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  302  AKIVLLGHGENSIYNIEMEMRVTYKDSVEITTEIADIQDRHKIFEIMKKHQPYIVYHAAA  361
             +I+LLGHGENSIY+I+ E+   YK+ +E+   IAD+QD++++  +M+  +PY+VYHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  362  HKHVPLMERNPEEAVKNNIFGTKNVAEAADTFKVNTFVMVSTDKAVNPTNVMGATKRFAE  421
            HKHVPLME NP+EA+KNN++GT+N AEAA    V+ FVMVSTDKAVNP NVMGA+KR AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  422  MLVQHLAAVSTNTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTHPEMIRYFMTIPE  481
            M++Q +   +++T FVAVRFGNVLGSRGSVIPLFKKQI+ GGPVTVTHP M RYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  482  ASRLVIQAGTLAKGGELFVLDMGDPVKIVDLARNLITLSGYSIEEIGIEFTGLRPGEKMY  541
            ASRLV+QAG+LA GGE+FVLDMG PVKIVDLA+NLI LSGY  E+IGIEF+G+R+GEK++
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  542  EELLNEGEIHPEQIFPKIHIGKAVLMDQEILRQFMNDFEGMSKEEIRERLL  592
            EELLN +EIHPEQ++ KI  GK   +++E L + ++DF  + +E +R+ ++
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEII  595

54) BCN_5200 in NC_016771


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  527 bits (1987),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 323/591 (55%), Positives = 463/591 (79%), Gaps = 4/591 (0%)

Query  4    RKRLSLLILLDSFIVLTAVYLSYWFIHPNILSKIPTTVIISSITLLCSHHIFAAIYKLYN  63
            ++R+ +L+++DS+IV  +V+L+Y +++P + +     +I+SS+ LL SHH+FA I+ LY+
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KAWEYASIGELKQIFKAITLSIIVTAIVQQIINHDI-YVRILAIAWMLHLLLIGGSRFVW  122
            +AWEYAS++EL  I K++T SI+ T+I+  I+ ++  ++R+  I+WM+HLLLIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RMFRDTYITKAADKKRTLIIGAGSAGTMVVRQLQHNKEADLYPVAFVDDDRNKQKLEI-Y  181
            R++R T+I+K + KK TLI+G+G +G++++RQ+ +    ++ PV  VDDD NKQK+ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  182  NVPVVGTTNHIQEIVENNDIEHIIIAIPSLNRNQINEIFEKCRKTKAKTQIVPMLEDLLD  241
             V V G  ++I E+V + +I  IIIAIP+L+++++ EI   C  T+     +P +E+++ 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  242  GKVSVNEFRDVQVEDLLGREPIQLDDAGIGEKITGKTILVTGAGGSIGSEICRQVMKYKP  301
            G + VN ++ V+VEDLLGR+P++LD A+I+  +T KTILVTGAGGSIGSEICRQV K+ P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  302  AKIVLLGHGENSIYNIEMEMRVTYKDSVEITTEIADIQDRHKIFEIMKKHQPYIVYHAAA  361
             +I+LLGHGENSIY+I+ E+   YK+ +E+   IAD+QD++++  +M+  +PY+VYHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  362  HKHVPLMERNPEEAVKNNIFGTKNVAEAADTFKVNTFVMVSTDKAVNPTNVMGATKRFAE  421
            HKHVPLME NP+EA+KNN++GT+N AEAA    V+ FVMVSTDKAVNP NVMGA+KR AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  422  MLVQHLAAVSTNTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTHPEMIRYFMTIPE  481
            M++Q +   +++T FVAVRFGNVLGSRGSVIPLFKKQI+ GGPVTVTHP M RYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  482  ASRLVIQAGTLAKGGELFVLDMGDPVKIVDLARNLITLSGYSIEEIGIEFTGLRPGEKMY  541
            ASRLV+QAG+LA GGE+FVLDMG PVKIVDLA+NLI LSGY  E+IGIEF+G+R+GEK++
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  542  EELLNEGEIHPEQIFPKIHIGKAVLMDQEILRQFMNDFEGMSKEEIRERLL  592
            EELLN +EIHPEQ++ KI  GK   +++E L + ++DF  + +E +R+ ++
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEII  595

55) YBT020_26290 in NC_017200


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  526 bits (1983),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 328/603 (55%), Positives = 469/603 (78%), Gaps = 4/603 (0%)

Query  4    RKRLSLLILLDSFIVLTAVYLSYWFIHPNLLSKIPNTVIISSITLLCSHHIFAAIYKLYN  63
            ++R+ +L+++DS+IV  +V+L+Y +++P + +   N +I+SS+ LL SHH+FA I+ LY+
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KAWEYASIGELKQIFKAITLSIIVTAIVQQIINHDI-YVRILAIAWMLHLLLIGGSRFVW  122
            +AWEYAS++EL  I K++T SI+ T+I+  I+ ++  ++R+  I+WM+HLLLIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RMFRDTYIIKAADKKRTLIIGAGSAGTMVVRQLQHNKEADLYPIAFVDDDRNKQKLEI-Y  181
            R++R T+I K + KK TLI+G+G +G++++RQ+ +    ++ P+  VDDD NKQK+ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  182  NVPVVGTTNHIQEIVEDNDIEHIIIAIPSLNRNQINEIFEKCRKTKAKTQIVPMLEDLLD  241
             V V G  ++I E+V   +I  IIIAIP+L+++++ EI   C  T+     +P +E+++ 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  242  GKVSVNEFRDVQVEDLLGREPIQLDDAGIGEKITGKTILVTGAGGSIGSEICRQVMKYRP  301
            G + VN ++ V+VEDLLGR+P++LD A+I+  +T KTILVTGAGGSIGSEICRQV K+ P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  302  AKIVLLGHGENSIYNIEMEMRVTYKDIVEITTEIADIQDRHKIFEIMKKHQPYIVYHAAA  361
             +I+LLGHGENSIY+I+ E+   YK+ +E+   IAD+QD++++  +M+  +PY+VYHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  362  HKHVPLMERNPEEAVKNNIFGTKNVAEAADTFKVNTFVMVSTDKAVNPTNVMGATKRFAE  421
            HKHVPLME NP+EA+KNN++GT+N AEAA    V+ FVMVSTDKAVNP NVMGA+KR AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  422  MLVQHMASVSTSTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTHPDMIRYFMTIPE  481
            M++Q M + ++ T FVAVRFGNVLGSRGSVIPLFKKQI+ GGPVTVTHP+M RYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  482  ASRLVIQAGTLARGGELFVLDMGEPVKIVDLAKNLITLSGYSIEEIGIEFTGLRPGEKMY  541
            ASRLV+QAG+LA GGE+FVLDMG PVKIVDLAKNLI LSGY  E+IGIEF+G+R+GEK++
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  542  EELLNEGEIHPEQIFPKIHIGKAVLMDQAILRQFMNEFEGMDKEEIRERLLGIANNKTTL  601
            EELLN +EIHPEQ++ KI  GK   +++  L + +++F  + +E +R+ ++ + NN+ T 
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVNNNKTG  604

Query  602  SEK  604
             EK
Sbjct  605  EEK  607

56) B1NLA3E_20955 in NC_021171


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  524 bits (1976),  Expect = 9e-150, Method: Compositional matrix adjust.
 Identities = 323/581 (56%), Positives = 452/581 (78%), Gaps = 6/581 (1%)

Query  4    RTRLTMLAFLDSIIVLTAIYISFLTLHPNLSIFKMPTLMLTAITLLLSHHFFAFVYKLYK  63
            + R+ ML F+DSIIV  ++++++  L+P +  + +  L+L+++ LL+SHH FA ++ LY 
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KAWEYASVGEVISIVKAVTFSI-GTTLIMQLLVFHDAYVRALMIAWMLHVILIGGSRFSW  122
            +AWEYASV+E+I IVK+VT SI +T +I+ ++  + +++R   I+WM+H++LIGGSR+SW
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RVVRDRYISTQTQMKRTLIIGAGAAGTMVARQVLNNHDTELKPVAFIDDDPKKYRLDIL-  181
            R+ R  +IS + + K TLI+G+G +G+++ RQ++N     + PV  +DDD++K ++ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  182  GLPVVGNVNHITKTVETLQIDNIVIAIPSLSRKELKRIYDECAKTKAKTKIMPMLEDIML  241
            G+ V G +++I   V  ++I +I+IAIP+LS++ L+ I   C  T+     MP +E++M 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  242  GKVSVNHFRDVQVEDLLGREPVDLDIAGISEYVSGKTVLVTGAGGSIGSEICRQICKFSP  301
            G + VN ++ V+VEDLLGR+PV+LD+A+IS  ++ KT+LVTGAGGSIGSEICRQ+CKF+P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  302  RKIVLVGHGENSIYGIDMELRNAVPPSIEIVPVIGDIQDRERIFEVMEIHRPSVVYHAAA  361
             +I+L+GHGENSIY I+ EL       IE++P+I+D+QD+ER+  VM+  +P VVYHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  362  HKHVPLMEYNPMEAVKNNVFGTKNVAEAAHSFGVDTFVMISSDKAVNPTNVMGSTKRIAE  421
            HKHVPLMEYNP EA+KNNV+GT+N AEAA    V  FVM+S+DKAVNP NVMG++KR+AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  422  MIIQKLDKE-SKTRFVAVRFGNVLGSRGSVIPLFKKQIQAGGPVTVTHEDMTRYFMTIPE  480
            M+IQ +++E SKT FVAVRFGNVLGSRGSVIPLFKKQI+AGGPVTVTH +MTRYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  481  ASRLVIQAGSLARGGEIFVLDMGEPVKIVDLARNLITLSGYSEDEIGIGFSGLRPGEKMY  540
            ASRLV+QAG+LA GGEIFVLDMG PVKIVDLA+NLI LSGY E++IGI FSG+R+GEK++
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  541  EELLNAEEIYPEPVFPKIFIGRAVLEQEAEVGYLLERFESF  581
            EELLN +EI PE V+ KI+ G+    Q  E   L ++++ F
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKV---QKIEKEELYNKIDDF  584

57) BCE_5395 in NC_003909


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  523 bits (1973),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 321/591 (55%), Positives = 461/591 (79%), Gaps = 4/591 (0%)

Query  4    RKRLSLLILLDSFIVLTAVYLSYWFIHPNILSKIPTTVIISSITLLCSHHIFAAIYKLYN  63
            ++R+ +L+++DS+IV  +V+L+Y +++P + +     +I+SS+ LL SHH+FA I+ LY+
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KAWEYASIGELKQIFKAITLSIIVTAIVQQIINHDI-YVRILVIAWMLHLLLIGGSRFVW  122
            +AWEYAS++EL  I K++T SI+ T+I+  I+ ++  ++R+  I+WM+HLLLIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RMFRDTYITKAADKKRTLIIGAGSAGTMVVRQLQHNKEADLYPIAFVDDDRNKQKLEI-Y  181
            R++R T+I+K + KK TLI+G+G +G++++RQ+ +    ++ P+  VDDD NKQK+ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  182  NVPVVGTTNHIQEIVEDNDIEHIIIAIPSLNRNQINEIFEKCRKTKAKTQIVPMLEDLLD  241
             V V G  ++I E+V   +I  IIIAIP+L+++++ EI   C  T+     +P +E+++ 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  242  GKVSVNEFRDVQVEDLLGREPIQLDDAGIGEKIAGKTILVTGAGGSIGSEICRQVMKYKP  301
            G + VN ++ V+VEDLLGR+P++LD A+I+  ++ KTILVTGAGGSIGSEICRQV K+ P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  302  AKIVLLGHGENSIYNIEMEMRVTYKDTVEITTEIADIQDRHKIFEIMKKHQPYIVYHAAA  361
             +I+LLGHGENSIY+I+ E+   YK+ +E+   IAD+QD++++  +M+  +PY+VYHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  362  HKHVPLMERNPEEAVKNNIFGTKNVAEAADTFKVNTFVMVSTDKAVNPTNVMGATKRFAE  421
            HKHVPLME NP+EA+KNN++GT+N AEAA    V+ FVMVSTDKAVNP NVMGA+KR AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  422  MLVQHMASVSTGTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTHPDMIRYFMTIPE  481
            M++Q M + ++ T FVAVRFGNVLGSRGSVIPLFKKQI+ GGPVTVTHP+M RYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  482  ASRLVIQAGTLARGGELFVLDMGDPVKIVDLAKNLITLSGYSIEEIGIEFTGLRPGEKMY  541
            ASRLV+QAG+LA GGE+FVLDMG PVKIVDLAKNLI LSGY  E+IGIEF+G+R+GEK++
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  542  EELLNEGEIHPKQIFPKIHIGKAVLMDQTILRQFMNDFEGISKEEIRERLL  592
            EELLN +EIHP Q++ KI  GK   +++  L + ++DF  + +E +R+ ++
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEII  595

58) BCK_09000 in NC_018491


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  523 bits (1972),  Expect = 2e-149, Method: Compositional matrix adjust.
 Identities = 322/591 (55%), Positives = 460/591 (78%), Gaps = 4/591 (0%)

Query  4    RKRLSLLILLDSFIVLTAVYLSYWFIHPNILSKIPTTVIISSITLLCSHHIFAAIYKLYN  63
            ++R+ +L+++DS+IV  +V+L+Y +++P + +     +I+SS+ LL SHH+FA I+ LY+
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KAWEYASIGELKQIFKAITLSIIVTAIVQQIINHDI-YVRILAITWMLHLLLIGGSRFVW  122
            +AWEYAS++EL  I K++T SI+ T+I+  I+ ++  ++R+  ITWM+HLLLIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RMFRDTYITKATDKKRTLIIGAGSAGTMVVRQLQHNKEADLYPIAFVDDDRNKQKLEI-Y  181
            R++R T+I+K   KK TLI+G+G +G++++RQ+ +    ++ P+  VDDD NKQK+ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  182  NVPVVGTTNHIQEIVEDNDIEHIIIAIPSLNRNQINEIFEKCRKTKAKTQIVPMLEDLLD  241
             V V G  ++I E+V   +I  IIIAIP+L+++++ EI   C  T+     +P +E+++ 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  242  GKVSVNEFRDVQVEDLLGREPIQLDDAGIGEKIAGKTILVTGAGGSIGSEICRQVMKYKP  301
            G + VN ++ V+VEDLLGR+P++LD A+I+  ++ KTILVTGAGGSIGSEICRQV K+ P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  302  AKIVLLGHGENSIYNIEMEMRVTYKDMVEITTEIADIQDRHKIFEIMKKHQPYIVYHAAA  361
             +I+LLGHGENSIY+I+ E+   YK+ +E+   IAD+QD++++  +M+  +PY+VYHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  362  HKHVPLMERNPEEAVKNNIFGTKNVAEAADTFKVNTFVMVSTDKAVNPTNVMGATKRFAE  421
            HKHVPLME NP+EA+KNN++GT+N AEAA    V+ FVMVSTDKAVNP NVMGA+KR AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  422  MLVQHMASVSTSTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTHPDMIRYFMTIPE  481
            M++Q M + ++ T FVAVRFGNVLGSRGSVIPLFKKQI+ GGPVTVTHP+M RYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  482  ASRLVIQAGTLARGGELFVLDMGDPVKIVDLAKNLITLSGYSIEEIGIEFTGLRPGEKMY  541
            ASRLV+QAG+LA GGE+FVLDMG PVKIVDLAKNLI LSGY  E+IGIEF+G+R+GEK++
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  542  EELLNEGEIHPKQIFPKIHIGKAVLMDQAILRQFMNDFEGISKEEIRERLL  592
            EELLN +EIHP Q++ KI  GK   +++  L + ++DF  + +E +R+ ++
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEII  595

59) Bsel_3052 in NC_014219


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  520 bits (1961),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 319/568 (57%), Positives = 443/568 (78%), Gaps = 7/568 (1%)

Query  4    RTRLSMLILVDSFIVMASIFVSYWLLMPTMDGLPMAIVVSSIALFIC-HHLFAHIFKLYK  62
            + R+ ML+++DS+IV  S+F++Y +L P   G ++ +++ S  +++  HH+FA+IF LY 
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  63   KVWQYASIQELIAIFKAVSFSVLSIAFLQLMVFG--TMFTRTLLVTAMLHILLIGASRFS  120
            + W+YAS+ ELI I K+V+ S+++ +++ + +F   + F R  ++T M+H+LLIG+SR+S
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGII-VPIFTQQAPFLRLYFITWMMHLLLIGGSRLS  125

Query  121  WRLYRDTKLNLDKEKKRTLIIGAGNGGSLVARQLMNSEMSELQPVAFIDDDPQKQRLELM  180
            WR+YR T ++ +  KK TLI+G+G GGSL+ RQ+MN+    ++PV  +DDD++KQ++ + 
Sbjct  126  WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIA  185

Query  181  N-IPVMGTLdeiediviekdvehiviAIPSLCNSDLNKIFTKCSETGVKTQIMPSVEDIM  239
            + + V G + +I ++V   ++  I+IAIP+L +  L  I   C  T V    MP++E++M
Sbjct  186  SGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVM  245

Query  240  SGKVEVSQIRDVQVEDLLGREPVELDTGRIGEKLTGKTVLVTGAGGSIGSEVCRQVARFK  299
            SG +EV++++ V+VEDLLGR+PVELD + I+  LT KT+LVTGAGGSIGSE+CRQV +F 
Sbjct  246  SGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFT  305

Query  300  PEKLILLGHGENSIYDIEMELKNTYPDTV-FDPVIADVQDAERMHDVFETSKPDVVYHAA  358
            P++++LLGHGENSIY+I+ EL   Y + +   P+IADVQD ERM  V ++ KP VVYHAA
Sbjct  306  PDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAA  365

Query  359  AHKHVPLMERNPHEAVKNNIIGTRNVSMAAHEAGVTNFVMVSTDKAVNPTSVMGGTKRIA  418
            AHKHVPLME NP+EA+KNN++GTRN + AA  A V++FVMVSTDKAVNP +VMG++KR+A
Sbjct  366  AHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVA  425

Query  419  EMIVQHMDT-ISDTTFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTDPEMTRYFMTIP  477
            EM++Q M+   S T FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT+P MTRYFMTIP
Sbjct  426  EMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIP  485

Query  478  EASRLVLQAGSIAEGGETFVLDMGEPVRIVDLAKNLIRLSGFSTDEIEIRYSGIRPGEKL  537
            EASRLVLQAG++A GGE FVLDMG PV+IVDLAKNLIRLSG+  ++I I +SGIR+GEKL
Sbjct  486  EASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKL  545

Query  538  FEELLSKDEVHSEQIYPKIYRGKTPPVN  565
            FEELL+KDE+H+EQ+Y KIYRGK   ++
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIE  573

60) BC5274 in NC_004722


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  514 bits (1940),  Expect = 6e-147, Method: Compositional matrix adjust.
 Identities = 325/592 (55%), Positives = 457/592 (78%), Gaps = 7/592 (1%)

Query  1    MILLDSFIVLTAVYLSYWFIHPNVLNKIPMTVVISSITLLCS-HHVFAAIYKLYNKAWEY  59
            ++++DS+IV  +V+L+Y +++P  ++  ++ V+I S  +L   HHVFA I+ LY++AWEY
Sbjct  13   LLFIDSIIVTFSVFLGYYILEP-FFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  60   ASIGELKQIFKAITLSILVTAIVQQIINHDI-YVRILAIAWMLHLLLIGGSRFVWRMFRD  118
            AS++EL  I K++T SI+ T+I+  I+ ++  ++R+  I+WM+HLLLIGGSR+ WR++R 
Sbjct  72   ASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRK  131

Query  119  TYITKATDKKRTLIIGAGSAGTMVVRQLQHNKEADLYPIAFVDDDRNKQKLEI-YNVPVI  177
            T+I+K   KK TLI+G+G +G++++RQ+ +    ++ P+  VDDD NKQK+ I   V V 
Sbjct  132  TFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQ  191

Query  178  GTTNHIQEIVEDNDIEHIIIAIPSLNRGQINEIFEKCRKTKAKTQIVPMLEDLLDGKVSV  237
            G  ++I E+V   +I  IIIAIP+L++ ++ EI   C  T+     +P +E+++ G + V
Sbjct  192  GCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEV  251

Query  238  NEFRDVQVEDLLGREPVQLDDKGIGEKIQDKTVLITGAGGSIGSEICRQILKYKPAKMVL  297
            N ++ V+VEDLLGR+PV+LD  +I+  + +KT+L+TGAGGSIGSEICRQ+ K+ P +++L
Sbjct  252  NKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIML  311

Query  298  LGHGENSIYHIEMELRTKYKEQAEFVTEIADIQDRNKIFEIMKKHKPFVVYHAAAHKHVP  357
            LGHGENSIYHI+ EL   YKE+ E +  IAD+QD++++  +M+  KP+VVYHAAAHKHVP
Sbjct  312  LGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVP  371

Query  358  LMERNPEEAVKNNIIGTKNVAEAADTFGINTFVMVSTDKAVNPTNVMGATKRVAEMVVQH  417
            LME NP+EA+KNN++GT+N AEAA    ++ FVMVSTDKAVNP NVMGA+KRVAEMV+Q 
Sbjct  372  LMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQS  431

Query  418  MAM-ISQTRFVAVRFGNVLGSRGSVIPLFKKQIQSGGPVTVTHPDITRYFMTIPEASRLV  476
            M    S+T FVAVRFGNVLGSRGSVIPLFKKQI++GGPVTVTHP++TRYFMTIPEASRLV
Sbjct  432  MNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLV  491

Query  477  IQAGSLARGGELFVLDMGEPVKIADLAKNLIQLSGYSIEEIGIEYSGLRPGEKMYEELLN  536
            +QAG+LA GGE+FVLDMG PVKI DLAKNLI+LSGY  E+IGIE+SG+R+GEK++EELLN
Sbjct  492  LQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLN  551

Query  537  DNEIHKEQVFPKIHIGKAVLKDFESIQQFIDEFEQMSQESIRKTLLDFANNK  588
             +EIH EQV+ KI  GK    + E + + ID+F  + +ES+R  ++ F NN+
Sbjct  552  KDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVNNN  601

61) BcerKBAB4_5070 in NC_010184


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  514 bits (1938),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 320/590 (55%), Positives = 459/590 (78%), Gaps = 4/590 (0%)

Query  14   KRLSLLVLLDSFIVLTAVYLSYWLIHPNVLSKIPTTVIISSITLLCSHHIFASIYKLYNK  73
            +R+ +L+++DS+IV  +V+L+Y +++P   +     +I+SS+ LL SHH+FA I+ LY++
Sbjct  8    QRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHR  67

Query  74   AWEYASIGELKQIFKAITFSIMVTAIVQQIINHDI-YVRILVIVWMLHLLLIGGSRFVWR  132
            AWEYAS++EL  I K++T SI+ T+I+  I+ ++  ++R+  I WM+HLLLIGGSR+ WR
Sbjct  68   AWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWR  127

Query  133  MFRDTYITKDTNKKRTIIIGAGSAGTMVVRQLQHNKEADLFPIAFVDDDKNKQKLEI-YN  191
            ++R T+I+K+ +KK T+I+G+G +G++++RQ+ +    ++ P+  VDDD NKQK+ I   
Sbjct  128  IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASG  187

Query  192  VPVVGMTDNIKEIVEDNDIEHIIIAIPSLNRKQINGIFEKCRKTKAKTQIVPMLEDLLDG  251
            V V G   +I E+V   +I  IIIAIP+L+++++  I   C  T+     +P +E+++ G
Sbjct  188  VKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSG  247

Query  252  KVSVNEVRDVQVEDLLGREPIQLddagiggkiagkTILVTGAGGSIGSEICRQVMKYKPA  311
             + VN ++ V+VEDLLGR+P++LD A+I+  ++ KTILVTGAGGSIGSEICRQV K+ P 
Sbjct  248  EIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPD  307

Query  312  KIVLLGHGENSIYNIEMEMRVTYKDAVEITTEIADVQDRNKIFEIMEKHRPYIVYHAAAH  371
            +I+LLGHGENSIY+I+ E+   YK+ +E+   IADVQD++++  +M+  +PY+VYHAAAH
Sbjct  308  RIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAH  367

Query  372  KHVPLMERNPEEAVKNNIFGTKNVAEASDTFKVNTFVMVSTDKAVNPTNVMGATKRFAEM  431
            KHVPLME NP+EA+KNN++GT+N AEA+    V+ FVMVSTDKAVNP NVMGA+KR AEM
Sbjct  368  KHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEM  427

Query  432  LVQHMAAVSNNTSFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTHPDMIRYFMTIPEA  491
            ++Q M   +++T FVAVRFGNVLGSRGSVIPLFKKQI+ GGPVTVTHP+M RYFMTIPEA
Sbjct  428  VIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEA  487

Query  492  SRLVIQAGTLAKGGELFVLDMGDPVKIVDLAKNLIILSGYSIEEVGIEFTGLRPGEKMYE  551
            SRLV+QAG+LA GGE+FVLDMG PVKIVDLAKNLI LSGY  E++GIEF+G+R+GEK++E
Sbjct  488  SRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFE  547

Query  552  ELLNEGEIHPEQIFPKIHIGKAVLMDQEILRQFMNDFEKMSKEDIRERLL  601
            ELLN +EIHPEQ++ KI  GK   +++E L + ++DF  + +E +R+ ++
Sbjct  548  ELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEII  595

62) BCO26_0342 in NC_015634


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  513 bits (1936),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 338/586 (58%), Positives = 464/586 (80%), Gaps = 3/586 (0%)

Query  1    MSLKKQLPILMLLDSAIVLCAVFAGYFILNPYMNVYTQPMLWVSSLTLLISYHFFAFRYR  60
            +S+K+++ +L+++DS IV  +VF GY+IL+P+ + Y+  +L +SSL LLIS H FA  + 
Sbjct  4    ISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFD  63

Query  61   LYQKAWEYASIGELtaiikavtfaavitavvqfiavHNI-YLRVLAITWMIHILLIGSSR  119
            LY++AWEYAS++EL  I+K+VT + V T+++  I  ++  +LR+  ITWM+H+LLIG+SR
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  120  FSWRVYRDRFMASKVQKKRTLIIGAGSAGTMVAHQLLKSKDADLEPVAFIDDDPNKWKLE  179
            +SWR+YR  F++   +KK TLI+G+G +G+++ +Q++++   ++EPV  +DDD+NK K+ 
Sbjct  124  LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  180  I-YGVPVVGMVSEIPWAVEQYNIDHIVIAIPSLKRVGMQRIYEECAKTKAKTKVLPMLED  238
            I  GV V G + +IP  V ++NI  I+IAIP+L +  ++ I   C  T+     +P +E+
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  239  LITGKVSVNQIRDVQVEDLLGREPIELDMTMISEKLTGKTVLVTGAGGSIGSEICRQVAQ  298
            +++G + VN+++ V+VEDLLGR+P+ELDM+ IS  LT KT+LVTGAGGSIGSEICRQV +
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  299  FLPKKLLLLGHGENSIYTIDMELRNKYDNDIEIVPLIADVQDRVRIFDIMNEYKPDVVYH  358
            F P +++LLGHGENSIY I+ EL   Y ++IE++P+IADVQD+ R+  +M+ YKP VVYH
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  359  AAAHKHVPLMEYNPTEAVKNNIFGTRNVAEAADTFGVKSFVMISTDKAVNPPNVMGATKR  418
            AAAHKHVPLMEYNP EA+KNN++GTRN AEAA    V  FVM+STDKAVNPPNVMGA+KR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  419  FAEMIIQNLAKE-SKTNFVAVRFGNVLGSRGSVIPLFKKQIQAGGPVTVTHPDMTRYFMT  477
             AEM+IQ++ +E SKT+FVAVRFGNVLGSRGSVIPLFKKQI+AGGPVTVTHP+MTRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  478  IPEASRLVIQAGALARGGEVFVLDMGEPVKIVDLAKNLITLSGFSIDEIGIKFTGKRPGE  537
            IPEASRLV+QAGALA GGE+FVLDMG PVKIVDLAKNLI LSG+  ++IGI F+G R+GE
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGE  543

Query  538  KLYeellneneVQKKSIYPKIHVGKASPMNKEDLYHVIDSLLNKDS  583
            KL+EELLN +E++   +Y KI  GK   ++KE+LY+ ID +L ++S
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINES  589

63) BH3718 in NC_002570


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  504 bits (1899),  Expect = 1e-143, Method: Compositional matrix adjust.
 Identities = 336/597 (57%), Positives = 460/597 (78%), Gaps = 11/597 (1%)

Query  1    MSY---KKRIALLATNDSVIVIFSIYVCNFLM--FSSGTFSSILFVSSVTLLASHHFFAQ  55
            M Y   K+R+ +L   DS+IV FS+++  +++  F  G   ++L++SS+ LL SHH FAQ
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  56   KLKLYKRVWQYASMNELKAIIMAVTFSIVTVAIVQLLFFQ-TVYVRTLFTTWMMHMLLIG  114
             + LY R W+YAS++EL  I+ +VT SIV+ +I+  +F Q + ++R  F TWMMH+LLIG
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  115  GSRFSWRLYRDTYMKPKLNKTKTLIIGAGSAGSMVARQLLQNQEAELRPVAFVDDDISKH  174
            GSR+SWR+YR T++    +K  TLI+G+G +GS++ RQ+++     + PV  VDDD +K+
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  175  NLEIM-GIPVLGAVKDMEGivaehsiehiiiaiPSLSRVELNDIFHVCSKTKIKTQILPK  233
            ++ I  G+ V G +KD+  +V   +I  IIIAIP+LS+  L +I  +C  T++    +P+
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  234  IEDIMMGRVEVAQFRDVEVEDLLGRDPVELDINGIAQYITNRTVLVTGAGGSIGSEICRQ  293
            IE++M G +EV +++ VEVEDLLGRDPVELD+ +I++ +T++T+LVTGAGGSIGSEICRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  294  IACFQPETLVLLGHGENSIYSIEMELRDKL-PNINIVTEIADIQDREKMFSIMDDRKPhv  352
            +  F P+ ++LLGHGENSIY I+ EL +    +I+++  IAD+QD+E+M  +M+  KP V
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  353  vfhaaahkhvPLMERNPEEAVKNNVLGTKNTAEAASAANVNTFVMISTDKAVNPTSVMGA  412
            V+HAAAHKHVPLME NP+EA+KNNVLGT+NTAEAA  A+V+ FVM+STDKAVNP +VMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  413  TKRIAEMIIQHMDM-ISDTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTDPEMVRY  471
            +KR+AEM+IQ M+   S T FVAVRFGNVLGSRGSVIPLFKKQI+ GGPVTVT+P M RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  472  FMTIPEASRLVLQAGALADGGEVFVLDMGEPVKIVDLARNLIRLSGYTEDEIPIVFTGMR  531
            FMTIPEASRLVLQAGALA GGE+FVLDMG PVKIVDLA+NLIRLSGY E++I I F+G+R
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIR  540

Query  532  PGEKLFEELLGENEVHSEQVYPKIYRGKTPPVEINVIYQLTDEFAKKEKDALREELL  588
            +GEKLFEELL  +E+H+EQVY KIYRGK   +E + +Y+  D+F  +E  ++R+E++
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINE--SVRDEII  595

64) AXY_20090 in NC_018704


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 295/532 (56%), Positives = 412/532 (78%), Gaps = 4/532 (0%)

Query  52   HFIYALIFKLYHKIWAYASVKELKAIIYSVTLANLSTAVFQYFINDFKIYRRAMLVTWLI  111
            H ++A IF LYH+ W YASV EL  I+ SVT + ++T+++  ++ +   + R  ++TW++
Sbjct  55   HHVFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMM  114

Query  112  HLTVIGGSRFIWRVFRDHYINPNPNRKRTLiigagdagamiaRQLTNGQTDVDLNPIGFV  171
            HL +IGGSR+ WR++R  +I+ + ++K TLI+G+G +G+++ RQ+ N    ++++P+  V
Sbjct  115  HLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPY-MGMEPVLVV  173

Query  172  DDDPMKQKMHV-FNLPVLGTTEEIEAIVEAKQIEHIIIAIPSIRNGELKAIINRCNNTAK  230
            DDD+ KQKM +   + V G   +I  +V   +I  IIIAIP++ +  L+ I + C+ T  
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  231  KVQILPKLEDLATGRVSVKMLRNIDVEDVLGRPPVELDIDAISTYVTDNTVMVTGAGGSI  290
             V  +P++E++ +G + V+ L++++VED+LGR PVELD+ +IS  +T++T++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  291  GSEICRQLMRFNPSRILLVGHGEFSIYTIEKELQKTYGHTTTEIIPLIADVQDRDRIFNI  350
            GSEICRQ+ +F P RI+L+GHGE SIY I++EL   Y     E+IP+IADVQD++R+ ++
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLY-KEEIEVIPIIADVQDKERMKKV  352

Query  351  VKQYQPWIIYHAAAHKHVPLMEYNPHEAIKNNVIGTKNVAEAADVFNVHTFVLVSTDKAV  410
            ++ Y+P ++YHAAAHKHVPLMEYNP+EAIKNNV+GT+N AEAA + +V  FV+VSTDKAV
Sbjct  353  MQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  411  NPTNVMGGTKRIAEMIIQDLAT-RSKTKFVAVRFGNVLGSRGSVIPLFKEQIAEGGPVTV  469
            NP NVMG++KR+AEM+IQ +    SKT FVAVRFGNVLGSRGSVIPLFK QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  470  THPEMTRYFMTIPEATRLVIQAGTLANGGEIFVLDMGEPVKIVDLAKNMINLSGYSTDDI  529
            THP MTRYFMTIPEA+RLV+QAG+LA GGEIFVLDMG PVKIVDLAKN+I LSGY  +DI
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  530  EIKFTGIRPGEKMYEELLNKDEIHPREVYEKIYIGKTDQVDINPVLQLIDTF  581
             I F+GIR+GEK++EELLNKDEIHP +VYEKIY GK ++++ + + + ID F
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

65) cpsD in NC_013791


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  478 bits (1803),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 309/526 (59%), Positives = 409/526 (78%), Gaps = 6/526 (1%)

Query  51   HHAFAHIYKLYKRVWQYASMNELYGIFMVVNFSIALTAVAQLIMIQDV-YYRTLAITWMM  109
            HH FA+I+ LY R W+YAS++EL  I   V  SI  T++   I  Q+  + R   ITWMM
Sbjct  55   HHVFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMM  114

Query  110  HILLIGGSRFSWRMYRDTYLKPKLGGKRTLIVGAGNAGTMVARQLRNSEDTELDPIGFVD  169
            H+LLIGGSR+SWR+YR T++      K TLIVG+G +G+++ RQ+ N+    ++P+  VD
Sbjct  115  HLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  170  DDNYKQHLEIMN-LPVLGEIKNIPTLVEELHVEHIIIAIPSLNRQELNEIFAVCTQTKVK  228
            DD+ KQ + I + + V G IK+IP LV  +++  IIIAIP+L++Q L EI  +C  T+V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  229  TQILPKMEDLITGNVEVNQFRDVEVEDLLGRDPVELDIEGIADYITNKTVLVTGAGGSIG  288
               +P++E++++G++EVN+++ VEVEDLLGRDPVELD+ +I+  +T+KT+LVTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  289  SEICRQIARFSPEELVLLGHGENSIYAIEMELRRNL--PDLNIKTEIADIQDREKIFSIM  346
            SEICRQ+ +F+P+ ++LLGHGENSIY I+ EL   L   ++++   IAD+QD+E++  +M
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELI-GLYKEEIEVIPIIADVQDKERMKKVM  353

Query  347  AARTPhvvfhaaahkhvPLMERNPEEAVKNNVLGTKNVAEAASAAHVNTFVMISTDKAVN  406
             A  P VV+HAAAHKHVPLME NP+EA+KNNVLGT+N AEAA  A+V+ FVM+STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  407  PTSVMGSTKRIAEMIVQHMDM-ISDTRFVAVRFGNVLGSRGSVIPLFKDQIKNGGPVTVT  465
            P +VMG++KR+AEM++Q M+   S T FVAVRFGNVLGSRGSVIPLFK QI  GGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  466  DPEMVRYFMTIPEASRLVLQAGSLAKGGEVFVLDMGEPVKIVDLARNLIRLSGYTEEEIP  525
            +P M RYFMTIPEASRLVLQAG+LA GGE+FVLDMG PVKIVDLA+NLIRLSGY EE+I 
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIG  533

Query  526  IVFTGMRPGEKMFEELLSKDEVHDEQVYPKIYRGKTPVVDINVTYE  571
            I F+G+R+GEK+FEELL+KDE+H EQVY KIYRGK   ++ +  Y+
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYN  579

66) Theco_3184 in NC_019897


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  475 bits (1790),  Expect = 5e-135, Method: Compositional matrix adjust.
 Identities = 306/517 (60%), Positives = 401/517 (78%), Gaps = 5/517 (0%)

Query  65   WEYASIGELIAIAKAVTLSIATAAIIQQLLVKDI-YFRLLAVTWMLHMLFIGGSRLCWRL  123
            WEYAS++ELI I K+VT SI +++II  ++ ++  ++RL  +TWM+H+L+IGGSRL WR+
Sbjct  69   WEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRI  128

Query  124  YRSARMPGGDGRKRTLIVGAGAAGTMVARQLLQ-PGSELRPVAFVDDDPAKHKLDIL-GL  181
            YR + ++  + +K TLIVG+G +G+++ RQ+++ P   + PV  VDDD+ K+K+ I  G+
Sbjct  129  YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGV  188

Query  182  PVLGGidrieriarekrieniVIAIPSLGKKALRRIFEECAKTEAKTQIMPKLEDLATGR  241
             V G I  I  + +   I +I+IAIP+L+++ LR I   C  T+     MP++E++ +G 
Sbjct  189  KVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGE  248

Query  242  VSVSELRDVEVEDLLGREPVELDIDSISGYVTGRTILVTGAGGSIGSEICRQVAKFGPKK  301
            + V+ L+ VEVEDLLGR+PVELD+ SIS  +T +TILVTGAGGSIGSEICRQV KF P +
Sbjct  249  IEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDR  308

Query  302  LVLLGHGENSIYSIEMELRDMYGDAGIEMVTEIADIQDVQKMMDVMQIHRPDVVYHAAAH  361
            ++LLGHGENSIY I+ EL ++Y +  IE++  IAD+QD ++M  VMQ  +P VVYHAAAH
Sbjct  309  IMLLGHGENSIYHIHQELIGLYKEE-IEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAH  367

Query  362  KHVPLMERNPEEAVKNNLIGTMNTARAASWHGVHIFVMISTDKAVNPTSVMGASKRLAEM  421
            KHVPLME NP+EA+KNN++GT NTA AA    V  FVM+STDKAVNP +VMGASKR+AEM
Sbjct  368  KHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEM  427

Query  422  YIQYMDG-ISRTKFVAVRFGNVLGSRGSVIPRFRKQIEAGGPVTVTHPDMVRYFMTIPEA  480
             IQ M+   S+T FVAVRFGNVLGSRGSVIP F+KQIEAGGPVTVTHP+M RYFMTIPEA
Sbjct  428  VIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEA  487

Query  481  SRLVIQAGALAKGGEIFVLDMGEPVKIVDLARNLIRMSGYSVEDIGIRFTGIRPGEKLFE  540
            SRLV+QAGALA GGEIFVLDMG PVKIVDLA+NLIR+SGY  EDIGI F+GIR+GEKLFE
Sbjct  488  SRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFE  547

Query  541  ELMNPEEVQDHQVYPKIHVGKSQRIPIREIEDLAEHF  577
            EL+N +E++ +QVY KI  GK Q+I   E+ +  ++F
Sbjct  548  ELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

67) epsC in NC_021362


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  470 bits (1772),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 304/580 (53%), Positives = 441/580 (77%), Gaps = 5/580 (0%)

Query  4    RRRLSIITALDSYLVLLSIFIGYQLISPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYK  63
            ++R+ ++  +DS +V +S+F+GY ++ P +  Y+ ++L+++SLILL ++H+FA+ F+LY 
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KVWEYASIGELYVLLKSITLSHLVTAVLELFFFQNVP-VRLLCLSWLFQLILIGGSRMMW  122
            + WEYAS++EL +++KS+T S + T+++  +F Q+ P +RL  ++W+ +L+LIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RIIREQ-VNKESKGSLKALIIGAGSAGSLIAKQLVQKPELNIKPVAFIDDDKTKYRLEIM  181
            RI R   ++KE+K    +LI+G+G +GSL+ +Q+++ P + + PV  +DDD  K ++ I 
Sbjct  127  RIYRKTFISKEGKKK-PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIA  185

Query  182  -GLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQDMYKACAQTGIKTQIMPKIDEIL  240
             G+ V G   +I + V++ NI +IIIAIP+LS  +++++ K C  T +    MP+I++++
Sbjct  186  SGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVM  245

Query  241  LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFK  300
             G   V +L+ V  EDLLGR+PV+LD + IS+ + ++ +LVTGAGGSIGSEICRQ+ KF 
Sbjct  246  SGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFT  305

Query  301  PKSIVLVGHGENSIHSILLELEEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAA  360
            P  I+L+GHGENSI  I  EL   +  ++   P IAD+QD+E+M  +M+ YKP V+YHAA
Sbjct  306  PDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAA  365

Query  361  AHKHVPLMEKCPKEAVKNNILGTKNVAEAADETGVETFVLISSDKAVNPANIMGATKRFA  420
            AHKHVPLME  P+EA+KNN+LGT+N AEAA  + V  FV++S+DKAVNP+N+MGA+KR A
Sbjct  366  AHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVA  425

Query  421  EMLIMNLGK-TSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIP  479
            EM+I ++ + TSKT FVAVRFGNVLGSRGSVIP+FKKQI  GGPVTVTH +MTRYFMTIP
Sbjct  426  EMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIP  485

Query  480  EASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTDQIKIEFTGIRPGEKM  539
            EASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  ++I IEF+GIR+GEK+
Sbjct  486  EASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKL  545

Query  540  YEELLNQNEVLAEQVFPKIHIGKAVDVELTVLKTFMEEFM  579
            +EELLN++E+ +EQV+ KI  GK   +E   L   +++F+
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

68) OB2896 in NC_004193


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  468 bits (1762),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 327/600 (55%), Positives = 461/600 (77%), Gaps = 15/600 (2%)

Query  1    MSYKQRLALLILLDSAIVSTAIFISFWVV---YPSYPEILLFEELGLSALALLVFHHIYA  57
            +S KQR+ +L+++DS IV+ ++F+++ ++   + +Y+    ++ L LS+L LL+ HH++A
Sbjct  4    ISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYS----INVLILSSLILLISHHVFA  59

Query  58   FIYKLYNKVWAYASVREL-LAIvqavtltvlsvavvqLIANGMIYRRALVITWLLHIVLI  116
             I+ LY++ W YASV EL L +    +  V +  +V ++++   + R   ITW++H++LI
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  117  GGSRFMWRVVRDRYIKQNANQKRTLiigagsagamiaRQLQNEHQSEIYPVAFIDDDIAK  176
            GGSR+ WR+ R  +I +++++K TLI+G+G +G+++ RQ+ N     + PV  +DDD  K
Sbjct  120  GGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  177  QKMEV-YNLPVVGRASDIPEKVKDFKIEHIVIAIPSLRNGELKRIVELCGETEAKVQMIP  235
            QKM +   + V G   DIPE VK F+I  I+IAIP+L +  L+ I  LC  T+  V  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  236  KIEDLMTGKVSVSHLKNVEVEDLLGREPVKLDIQAISEYVTENTVMVTGAGGSIGSEVCR  295
            +IE++M+G + V+ LK+VEVEDLLGR+PV LD+ +IS  +T++T++VTGAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  296  QVMRFKPQKILLVGHGEFSIYNIDMELRTNYKDSEIEIVPLIGDVQDRDRMYQIMQEhhp  355
            QV +F P++I+L+GHGE SIY+I+ EL   YK+ EIE++P+I+DVQD++RM ++MQ   P
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERMKKVMQAYKP  358

Query  356  avvyhaaahkhvPLMEYNPHEAIKNNIIGTKNVAEAADAFGVSTFVMVSTDKAVNPTNVM  415
             VVYHAAAHKHVPLMEYNP+EAIKNN++GT+N AEAA    VS FVMVSTDKAVNP NVM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  416  GASKRIAEMVVQDLASRSS-TKFVAVRFGNVLGSRGSVIPLFKKQMEQGGPITVTHPEMT  474
            GASKR+AEMV+Q + + +S T FVAVRFGNVLGSRGSVIPLFKKQ+E GGP+TVTHP MT
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  475  RYFMTIPEASRLVVQAGTLARGGEIFVLDMGNPVKIADLARNLIRLSGYNEDEIEIKYTG  534
            RYFMTIPEASRLV+QAG+LA GGEIFVLDMG+PVKI DLA+NLIRLSGY+E++I I ++G
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSG  538

Query  535  IRPGEKMFEELLGEDEVFPEQVYEKIYIGKTVEVDQQLITNLLIHFEGF-NTQTLKDEMM  593
            IR+GEK+FEELL  DE+ PEQVYEKIY GK   ++++   +L   +++F   ++++DE++
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE---ELYNKIDDFLINESVRDEII  595

69) BcerKBAB4_3403 in NC_010184


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  465 bits (1753),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 324/600 (54%), Positives = 457/600 (77%), Gaps = 7/600 (1%)

Query  4    RRRISLLLLMDSMIVLSAIFFSYFFVNASFsv-itlssiissitllvshhlFALIYKLYN  62
            ++R+ +LL++DS+IV  ++F++Y+++++ F        I+SS+ LL+SHH+FA I+ LY+
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  63   KAWEYASIGELLIICKVVTFSIIATAVVQQLIMPKM-YFRLLVVTWMIHILLIGGSRFIW  121
            +AWEYAS++EL++I K VT SI+AT+++  ++  +  ++RL  +TWM+H+LLIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  122  RMYRDIYYVKKGDKKRTLIVGAGSAGTMVARQLLKNSAAELMPVAFIDDNAKKHNLDI-W  180
            R+YR  +  K G KK TLIVG+G +G+++ RQ+++ +   + PV  +DD+++K+++ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  181  GIPVIGGMNQIEYTVKKLNIEIIILAIPSLNKREQNVILKRCLKTEVKTQILPMLEDLVT  240
            G+ V G +++I   VKK+NI  II+AIP+L+++    I K C  T+V    +P +E++++
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  241  GKVSVNEFRDVQVEDLLGRDPVELDVDIISDYITDKVILVTGAGGSIGSEICRQIAKFRP  300
            G + VN ++ V+VEDLLGRDPVELD+  IS  +T+K ILVTGAGGSIGSEICRQ+ KF P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  301  KKLILLGHGENSIYSIEMELNRKYGDMKGTFIPEIADIQDEKKMQLIMSKHLPNVVYHAA  360
             +++LLGHGENSIY I+ EL   Y +     IP IAD+QD  +M+ +M    P VVYHAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEV-IPIIADVQDKERMKKVMQAYKPYVVYHAA  365

Query  361  AHKHVPLMENNPEEAVKNNLIGTMNVSEAARAHGVGTFVMISSDKAVNPTSVMGATKKLA  420
            AHKHVPLME NP+EA+KNN++GT N +EAA+   V+ FVM+S+DKAVNP +VMGA+K++A
Sbjct  366  AHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVA  425

Query  421  EMVIQH-KDKISHTKFVTVRFGNVLGSRGSVIPLFKKQIQNGGPVTVTHPDMVRYFMTIP  479
            EMVIQ  ++  S T FV+VRFGNVLGSRGSVIPLFKKQI+ GGPVTVTHP+M RYFMTIP
Sbjct  426  EMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIP  485

Query  480  EASRLVVQAGALAKGGEIFVLDMGEPVKIVDLAKNLIRLSGNSVDEIGIEFTGIRPGekl  539
            EASRLV+QAGALA GGEIFVLDMG PVKIVDLAKNLIRLSG   ++IGIEF+GIR+GEKL
Sbjct  486  EASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKL  545

Query  540  feellkedeMNEKQIHPRIYVGQEMNVRIEEIEEFISSYTDLNEVELRKRLLKLVNQRKT  599
            FEELL+ DE++  Q+  +IY G+  ++  EE+ + I  +  L +  +R  ++ +VN+ KT
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVNNNKT  603

70) yveM in NC_006270


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  460 bits (1734),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 309/580 (54%), Positives = 442/580 (77%), Gaps = 5/580 (0%)

Query  4    RRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYK  63
            ++R+ ++  +DS +V +S+F+GY ++ P +  Y+ ++L+++SLILL ++H+FA+ F+LY 
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KVWEYASIGELYVLLKSITLSHLVTAALELFFFQNVP-VRLLCLSWLFQLILIGGSRMMW  122
            + WEYAS++EL +++KS+T S + T+ +  +F Q+ P +RL  ++W+ +L+LIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RIIREQ-VNKESKGSLRALIIGAGSAGSLIAKQLVQKPELNIKPVAFIDDDKTKYRLEIM  181
            RI R   ++KE+K    +LI+G+G +GSL+ +Q+++ P + + PV  +DDD  K ++ I 
Sbjct  127  RIYRKTFISKEGKKK-PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIA  185

Query  182  -GLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEIL  240
             G+ V G   +I + V++ NI +IIIAIP+LS  +++E+ K C  T V    MP+I++++
Sbjct  186  SGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVM  245

Query  241  LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFK  300
             G   V +L+ V  EDLLGR+PV+LD + IS+ + ++ +LVTGAGGSIGSEICRQ+ KF 
Sbjct  246  SGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFT  305

Query  301  PKSIILVGHGENSIHSILLELKEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAA  360
            P  I+L+GHGENSI  I  EL   +  ++   P IAD+QD+E+M  +M+ YKP V+YHAA
Sbjct  306  PDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAA  365

Query  361  AHKHVPLMEKCPKEAVKNNILGTKNvaeaadetevetFVLISSDKAVNPANIMGATKRFA  420
            AHKHVPLME  P+EA+KNN+LGT+N AEAA  +EV  FV++S+DKAVNP+N+MGA+KR A
Sbjct  366  AHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVA  425

Query  421  EMLIMNLGK-TSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIP  479
            EM+I ++ + TSKT FVAVRFGNVLGSRGSVIP+FKKQI  GGPVTVTH +MTRYFMTIP
Sbjct  426  EMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIP  485

Query  480  EASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKM  539
            EASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK+
Sbjct  486  EASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKL  545

Query  540  YEELLNQNEVLAEQVFPKIHIGKAVDVEWTVLKSFMDEFM  579
            +EELLN++E+ +EQV+ KI  GK   +E   L + +D+F+
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

71) epsC in NC_006322


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  460 bits (1734),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 309/580 (54%), Positives = 442/580 (77%), Gaps = 5/580 (0%)

Query  4    RRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYK  63
            ++R+ ++  +DS +V +S+F+GY ++ P +  Y+ ++L+++SLILL ++H+FA+ F+LY 
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   KVWEYASIGELYVLLKSITLSHLVTAALELFFFQNVP-VRLLCLSWLFQLILIGGSRMMW  122
            + WEYAS++EL +++KS+T S + T+ +  +F Q+ P +RL  ++W+ +L+LIGGSR+ W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RIIREQ-VNKESKGSLRALIIGAGSAGSLIAKQLVQKPELNIKPVAFIDDDKTKYRLEIM  181
            RI R   ++KE+K    +LI+G+G +GSL+ +Q+++ P + + PV  +DDD  K ++ I 
Sbjct  127  RIYRKTFISKEGKKK-PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIA  185

Query  182  -GLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEIL  240
             G+ V G   +I + V++ NI +IIIAIP+LS  +++E+ K C  T V    MP+I++++
Sbjct  186  SGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVM  245

Query  241  LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFK  300
             G   V +L+ V  EDLLGR+PV+LD + IS+ + ++ +LVTGAGGSIGSEICRQ+ KF 
Sbjct  246  SGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFT  305

Query  301  PKSIILVGHGENSIHSILLELKEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAA  360
            P  I+L+GHGENSI  I  EL   +  ++   P IAD+QD+E+M  +M+ YKP V+YHAA
Sbjct  306  PDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAA  365

Query  361  AHKHVPLMEKCPKEAVKNNILGTKNvaeaadetevetFVLISSDKAVNPANIMGATKRFA  420
            AHKHVPLME  P+EA+KNN+LGT+N AEAA  +EV  FV++S+DKAVNP+N+MGA+KR A
Sbjct  366  AHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVA  425

Query  421  EMLIMNLGK-TSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIP  479
            EM+I ++ + TSKT FVAVRFGNVLGSRGSVIP+FKKQI  GGPVTVTH +MTRYFMTIP
Sbjct  426  EMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIP  485

Query  480  EASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKM  539
            EASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK+
Sbjct  486  EASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKL  545

Query  540  YEELLNQNEVLAEQVFPKIHIGKAVDVEWTVLKSFMDEFM  579
            +EELLN++E+ +EQV+ KI  GK   +E   L + +D+F+
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

72) BPUM_3081 in NC_009848


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  453 bits (1705),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 292/590 (50%), Positives = 436/590 (74%), Gaps = 6/590 (1%)

Query  5    QRLSIIVALDSYLILVAVFFGFQFVQEAALTVYTFEMLVIsslsllIGHHLFSYIFHVYK  64
            QR+ +++ +DS ++  +VF+G+ ++ E+ +  Y++++L++SSL LLI+HH+F+ IF++Y 
Sbjct  8    QRFMMLLFIDSIIVTFSVFLGY-YILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  65   QVWAYTGVRELFSLMKTFVCSFLFSMAMLYLFVQTWPF-RFLFIVWLFHVLFIGASRMAS  123
            + W Y++V EL+ ++K+   S++ +  ++ +F Q  PF R+ FI W+ H+L+IG+SR++ 
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  124  RLLHDGAKRLQVEKERALIIGAGSAGTIIVRQLQQSSDVHIEPVAFIDDDKTKHKLEIM-  182
            R+ +      +  K  +LI+G+G +G++++RQ+ +++ + +EPV  +DDD  K+K+ I  
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  183  GLPVLGGKEQIQTAVVMMDIQKIIIAIPSKSSHTLKGLYKECVATGVKTQIMPEMEQILK  242
            G+ V G   +I   V   +I+KIIIAIP+ S + L+ + K C +T V    MP++E+++ 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  243  GTHALNQLRDVQPEDLLGREPIQLDSSRLSVHLKGKTIMVTGAGGSIGSEICRQICVFAP  302
            G   +N+L+ V+ EDLLGR+P++LD + +S +L  KTI+VTGAGGSIGSEICRQ+C F+P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  303  QAIVLVGHGEFSIHSILLELKEIYGDTISLYPQIADIQDKQKMSEIVGQFQPDMIYHAAA  362
            + I+L+GHGE SI  I  EL  +Y + I + P IAD+QDK++M  ++  ++P ++YHAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  363  HKHVPLMEISPKEAVKNNIIGTKNVAEAAHEHGIETFVLISSDKAVNPANVMGATKRFAE  422
            HKHVPLME +P+EA+KNN++GT+N AEAA    +  FV++S+DKAVNP+NVMGA+KR AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  423  MLIMQMGA-SSDTKFVAVRFGNVLGSRGSVIPIFKKQIEQGGPVTVTHPAMTRYFMTIPE  481
            M+I  M   +S T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  482  ASRLVIQAGALAEGRQIFVLDMGEPVKIVDLAENLIHLSGYTTDQIPITFTGIRPGEKMY  541
            ASRLV+QAGALA G +IFVLDMG PVKIVDLA NLI+LSGY  ++I I F+GIR+GEK++
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLF  546

Query  542  EELLNQHEKAQEQIFPKIHIGHALDGDPYVLNRFIHEFDMMSEEQMREAL  591
            EELLN++E   EQ++ KI  G     +   L   I++F  + +E +R+ +
Sbjct  547  EELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEI  594

73) B1NLA3E_04360 in NC_021171


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  447 bits (1682),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 321/617 (53%), Positives = 462/617 (75%), Gaps = 18/617 (2%)

Query  1    MTY---KKRLSLFMIIDSCIVITAIFVGRFLVNATLNVITIPiiassiaillshhlf-sl  56
            M Y   K+R+ ++++IDS IV  ++F+G +++++ ++  +I ++  S  ILL  H   + 
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  57   VYKLYKKAWEYASVGELLIIFKVVTFSIMVAAIVQQVMVGEI-YFRLLTVTWSLHILLIG  115
            ++ LY +AWEYASV+EL++I K VT SI+ ++I+  +   +  ++RL  +TW +H+LLIG
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  116  GSRFCWRIMRDTIIDTHQNKKRTLIIGAGSAGTMVARQLIKNSEANLIPVAFIDDNEKKH  175
            GSR+ WRI R T+I  + +KK TLI+G+G +G+++ RQ+++ +   + PV  +DD+ +K+
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  176  QLEIL-GITVVGGVNEIEKTVKKLEIDNIIIAIPSLNRKELNSIFQECAKTKAKTKILPM  234
            ++ I  G+ V G +++I   VKK++I +IIIAIP+L+++ L  I + C  T+     +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  235  LEDLVTGKISVNQFRDVQVEDLLGRDPVDLNIESISEYITDKVVLVTGAGGSIGSEICRQ  294
            +E++++G I VN+++ V+VEDLLGRDPV+L++ SIS  +T+K +LVTGAGGSIGSEICRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  295  ISNFTPRKLVLLGHGENSIYSIEMELKETFGITKIEFITEIADLQDAKKMMDVMGTYQPh  354
            + +FTP +++LLGHGENSIY I+ EL   +    IE I  IAD+QD  +M  VM +Y+P 
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  355  vvyhaaahkhvPLMERNPEEAVKNNVIGTMNIANAASWHGVETFVMISTDKAVNPTSVMG  414
            VVYHAAAHKHVPLME NP+EA+KNNV+GT N A+AA    V  FVM+STDKAVNP +VMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  415  STKKLAEMIIQHMDKN-SKTKFVAVRFGNVLGSRGSVIPLFKKQIEKGGPITVTDPEMVR  473
            ++K++AEM+IQ M+++ SKT FVAVRFGNVLGSRGSVIPLFKKQIE GGP+TVT+P M R
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  474  YFMTIPEASRLVIQAGSLARGGEVFILDMGEPVKIVDLAKNLIKLSGNNIEEIGIEFTGI  533
            YFMTIPEASRLV+QAG+LA GGE+F+LDMG PVKIVDLAKNLI+LSG + E+IGIEF+GI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  534  RPGeklfeellkddeVHDKQVYPKIYIGKTAEL----FFNEIEELIANYSNMDKEALREK  589
            R+GEKLFEELL+ DE+H  QVY KIY GK   +    ++N I++++ N      E++R+ 
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN------ESVRDE  593

Query  590  LLNLANNRVATQSQPIM  606
            ++ + NN  + + +  M
Sbjct  594  IIFFVNNNKTGEEKCKM  610

74) MC28_2861 in NC_018693


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  444 bits (1674),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 304/543 (56%), Positives = 416/543 (77%), Gaps = 6/543 (1%)

Query  1    MYKKALEYASIGELLIICKVVTFSILTTAVVQQIIMQKM-YFRLLVVTWMIHILLIGGSR  59
            +Y +A EYAS++EL++I K VT SI++T+++  I+ Q+  ++RL  +TWM+H+LLIGGSR
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  60   FIWRMYRDIYYVKKGDKKRTLIVGAGSAGTMVARQLLKNNTAELMPVAFIDDNVKKHNLD  119
            + WR+YR  +  K G KK TLIVG+G +G+++ RQ+++     + PV  +DD+ +K+++ 
Sbjct  124  LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  120  I-WGIPVIGGMNQIDYVIKKLNIEIIILAIPSLNKRERNVILKDCLKTKVKTQILPMLED  178
            I  G+ V G +++I  ++KK+NI  II+AIP+L+++    I K C  T+V    +P +E+
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  179  LVTGKVSVNEFRDVQVEDLLGRDPVELDVEIISDYITDKVILVTGAGGSIGSEICRQVAK  238
            +++G + VN ++ V+VEDLLGRDPVELD+  IS  +T+K ILVTGAGGSIGSEICRQV K
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  239  FKPKKLILLGHGENSIYSIEMELNEKYNDMRGVFIPEIADIQDEKKMHLIMNKHLPNVVY  298
            F P +++LLGHGENSIY I+ EL   Y++   V IP IAD+QD  +M  +M+   P VVY
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEV-IPIIADVQDKERMKKVMQAYKPYVVY  362

Query  299  HAAAHKHVPLMENNPEEAVKNNLIGTMNIAEAARTHGVGTFVMISSDKAVNPTSVMGATK  358
            HAAAHKHVPLME NP+EA+KNN++GT N AEAA+   V+ FVM+S+DKAVNP +VMGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  359  KLAEMVIQH-KDKISHTKFVTVRFGNVLGSRGSVIPLFKKQIQNGGPITVTHPDMVRYFM  417
            ++AEMVIQ  ++  S T FV+VRFGNVLGSRGSVIPLFKKQI+ GGP+TVTHP+M RYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  418  TIPEASRLVVQAGALAKGGEIFVLDMGEPVKIVDLAKNLIRLSGNSLDEIGIEFTGIRPG  477
            TIPEASRLV+QAGALA GGEIFVLDMG PVKIVDLAKNLIRLSG   ++IGIEF+GIR+G
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSG  542

Query  478  eklfeellkedeMNEKQVHPRIYVGQEMNVRIEEIEKLILEYTELDEMELRKRLLNLVNQ  537
            EKLFEELL+ DE++  QV  +IY G+  ++  EE+ + I ++  L +  +R  ++ +VN+
Sbjct  543  EKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVNN  600

Query  538  RKT  540
             KT
Sbjct  601  NKT  603

75) HBHAL_1964 in NC_017668


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  439 bits (1653),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 305/585 (53%), Positives = 437/585 (75%), Gaps = 9/585 (1%)

Query  1    MTY---RQRLSLFIFIDSCIIITAVLISRMLVDSNF--YNFTPLIISTIGLLTVHLFFSF  55
            M Y   +QR+ +++FIDS I+  +V+++  ++++ F  Y++  LI+S++ LL  H  F+ 
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  56   LLNLYKKAWEYASIGELIIILKTVTYSiiviaaiqfi-ilqavYLRALAIIWMINLLVIG  114
            +++LY +AWEYAS++ELI+I+K+VT SI+  + I  I   QA +LR   I WM++LL+IG
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  115  GSRFLWRIYRDNYLVQSNTKKRTLIIGAGSAGIMVVRQLQRSEDTDLCPVAFVDDSPIKH  174
            GSR+ WRIYR  ++ +   KK TLI+G+G +G +++RQ+  +   ++ PV  VDD + K+
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  175  HLDIL-GIPvvggvgEIEKYVDQLDIENIIIAIPSLNREGIQNIFQECAKTEAKTQILPM  233
             + I  G+ V G + +I   V +++I +IIIAIP+L+++ +++I + C  T+     +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  234  LEDLVTGKVSVTQLRDVKVEDLLGRAPVDLDIDQISDYVKSQVVLVTGAGGSIGSEICRQ  293
            +E++++G + V +L+ V VEDLLGR PV+LD+  IS  +  + +LVTGAGGSIGSEICRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  294  IARFGPEELILLGHGENSIHAIETELREKFSKNGIKIITEIADIQDGDKMDKIFNYYSPD  353
            + +F P+ ++LLGHGENSI  I+ EL   + K+ I +I  IAD+QD ++M K+ + Y P 
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLY-KEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  354  VVYHAAAHKHVPLMERNPEEAVKNNMIGTYNVAKAARGSNTGTFVMISSDKAVNPTSVMG  413
            VVYHAAAHKHVPLME NP+EA+KNN++GT N A AA+ ++ + FVM+S+DKAVNP +VMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  414  ATKRLSEMIIQSMNG-YGNTKFVAVRFGNVLGSRGSVVPIFTKQIAKGGPVKVTHPEMIR  472
            A+KR++EM+IQSMN   ++T FVAVRFGNVLGSRGSV+P+F KQI  GGPV VTHP M R
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  473  YFMTIPEASSLVIQAGALTQGGEIFVLDMGAPVKIVDLARNLIKLSGYTLEDIKIEFSGI  532
            YFMTIPEAS LV+QAGAL+ GGEIFVLDMG PVKIVDLA+NLI+LSGY  EDI IEFSGI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  533  RPGeklyeellkddeVHENQVYPKIYLGKTANLYIDDIQEIINSY  577
            R+GEKL+EELL+ DE+H +QVY KIY GK  ++  +++ + I+ +
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

76) BATR1942_15095 in NC_014639


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  436 bits (1643),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 300/574 (53%), Positives = 427/574 (75%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLLSVIIGYQFFEDSYQFYDSGallltavsllvshhVCAMLFHQYKQMWSY  60
            M++ +D+ +V +SV++GY ++E  ++ Y    L+L+++ LL+SHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELIALLKGITLSAVMAGIVQYAVF--HTVLFRLLAVSWMLQLLLIGGTRVVSRVLK  118
            ++++ELI ++K++T S V +GI+  ++F  ++ ++RL  ++WM++LLLIGG+R+  R+ +
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ERMGKKRSSSSRALIIGAGSGGTLMVRQLLQQNDFDITPVAFIDDDQTKHKLEIM-GVPV  177
                 K +    +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  GV V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLRINNIIIAIPSLRTHELQILYKECVRTGVSIKIMPDFDEMLLGTRT  237
             G    I   V+K+ I++IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  ASQIRDVKAEDLLGRKPVTLDTSEISNSVKGKTIVVTGAGGSIGSEICRQISDFQPKNVV  297
             ++++ V  EDLLGR PV LD + IS+ +  KTI+VTGAGGSIGSEICRQ+  F P  ++
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSTHSELIGRFGKHVTFHTEIADVQDRDKMFTVMKKYEPhvvyhaaahkhv  357
            LLGHGENSI   H ELIG +  ++     IADVQD+++M  VM+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTRNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GTRN AEAA +     FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPVFKKQIEKGGPVTVTHPAMTRYFMTIPEASKL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEAS+L
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NQNEVHAEQVFPKIHIGKAVDGDWPMLMEFMEDF  570
            N++E+H+EQV+ KI  GK    +   L + ++DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

77) SGO_2024 in NC_009785


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  435 bits (1638),  Expect = 4e-123, Method: Compositional matrix adjust.
 Identities = 291/591 (50%), Positives = 428/591 (73%), Gaps = 20/591 (3%)

Query  3    ITRAQKRLILMIVDTIIIYMSGYIAYFFLSEYIQTRELNIIQNQTYVTVLYLLVGRGITG  62
            I+  Q+ ++L+++D+II+  S +++Y++L  +++   +N++   + + ++     + ++ 
Sbjct  4    ISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLI---SHHVFAQ  60

Query  63   AFSILNRYTDYKNLSKVAL---TLAGAYITVSVIETVFSLGVSY-RFMILGCMFSILFST  118
             F + +R  +Y ++S + L   +++++ ++ ++I  +F+   ++ R+ ++  M  +L+  
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  119  SVRLAWRIWYGYKTGVRYEEVASEMLLRTLVVGAGAGGSLFITTALKDS-PDIKIVAVVD  177
            + RL+WRI   Y+      E        TL+VG+G GGSL+I   ++ +  ++  V VVD
Sbjct  121  GSRLSWRI---YRKTFISKEGKKK---PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  178  RDVSKHG-SFLHGIKVVGSDSQIPEIVANYEINQIVIAIPSLEPEEYERILTLCKATNAT  236
             D +K+  S+  G+KV G   +IPE+V +++I++I+IAIP+L  +    I  LC +TN  
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  237  VKAMPKYEEVVTGKVRVSKLREIDISDLLGRKEVVLDQTSLKSNIEGKTVLVTGAGGSIG  296
            V  MP+ E+V++G + V+KL+ +++ DLLGR  V LD +S+  ++  KT+LVTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  297  SELCRQIARFNPDRLLLLGHGENSIYLIHKELYNQYGSKFEIIPVIADIQDRERIFQIME  356
            SE+CRQ+ +F PDR++LLGHGENSIY IH+EL   Y   +E+IP+IAD+QD+ER+ ++M+
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  NYRPDRVYHAAAHKHVPLMEYNPKEAVKNNIYGTRNVAEAAKATGVTKFVMISTDKAVNP  416
             Y+P  VYHAAAHKHVPLMEYNP+EA+KNN+ GTRN AEAAK + V+KFVM+STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  PNVMGATKRIAEMVVTSLNEE-GKTMFAAVRFGNVLGSRGSVVPLFKEQIAKGGPVTVTD  475
            PNVMGA+KR+AEMV+ S+N+E +KT F AVRFGNVLGSRGSV+PLFK QI  GGPVTVT+
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  476  FRMTRYFMTIPEASRLVIQAGALMHGGEVFVLDMGEPVKILDLAKKMISLSGHSEADINI  535
              MTRYFMTIPEASRLV+QAGAL  GGE+FVLDMG PVKI+DLAK++I LSG  E DI I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  536  VETGIRPGEKLYEELLSTQERVDEQVYEKIFVGNVHAPAKKE----VDDFI  582
              +GIR+GEKL+EELL+ +E   EQVYEKI+ G+V+   K E    +DDF+
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

78) DSY3347 in NC_007907


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  423 bits (1593),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 281/586 (48%), Positives = 423/586 (73%), Gaps = 23/586 (3%)

Query  3    LRKRTLLLMVIDAVLINLAVFLSFYIRFAVDGDGTIPEEYLLTLTHSAWTATLIYLSVFY  62
            +++R ++L+ ID++++ ++VFL++YI         +   Y + +   +    LI   VF 
Sbjct  6    IKQRFMMLLFIDSIIVTFSVFLGYYIL------EPFFKGYSINVLILSSLILLISHHVFA  59

Query  63   -IFGLYNKLWQYASIGELISiifavtvaaagtitvvYFIAPMRFPHTVSAL-----MWFS  116
             IF+LY++ W+YAS++ELI I+ +VT +  +T     +I P+ F +  + L      W  
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATG----IIVPI-FTQQAPFLRLYFITWMM  114

Query  117  TLFLIGGSRFIWRILQDNIFTPHVPGSQNQVLIIGAGDAGVMAARELKNKNYREGRPVGY  176
             L+LIGGSR+ WRI +  +++ +  G ++  LI+G+G +G +  R++ N  Y    PV  
Sbjct  115  HLLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  177  IDDAATKQRLQLM-GIPVLGTRRDIPRVVKNHNIDKIIIAMPSASGDVIREIVGICEKTG  235
            +DD + KQ++ +  G+ V G  +DIP +VK+ NI KIIIA+P+ S + +REI  +CE T 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  236  VDLKIMPGVFDVVSGKVDTKEIRQVQVEDLLGREAVTVDLEDVAGYLTGEAVLITGGGGS  295
            V++  MP + +V+SG ++ + +++V+VEDLLGR++V +D+  ++  LT  ++L+TG+GGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  296  IGSELCRQVARFNPAKLVIVGHGENSVFDIEQELRSE-NPGLDVVTEILDIKDREKVHLV  354
            IGSE+CRQV +F P +++++GHGENS+++I+QEL +  +  ++V+  I D++D+E++  V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  355  FQRYKPGVVFHAAAHKHVPLMEKNPEEAMKNNIMGTSNLAEAADAAKVKTFVLISTDKAV  414
             Q YKP VV+HAAAHKHVPLME NP+EA+KNN++GT N AEAA  A V  FV++STDKAV
Sbjct  353  MQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  415  NPTSIMGATKRVAEMVIQSMDK-RSDTKYVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTV  473
            NP ++MGA+KRVAEMVIQSM++  S T +VAVRFGNVLGSRGSVIP FK+QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPDMVRYFMTIPEASQLVIQAGSMAQGGEIFILDMGQPVKILDLARDLIRLSGFEPDVD  533
            THP+M RYFMTIPEAS+LV+QAG++A GGEIF+LDMG+PVKI+DLA++LIRLSG+  + D
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-D  531

Query  534  IKIKFTGMRPGEKLFEELLTAEEGTSATKHKRIFVAKPNNINVSQL  579
            I I F+G+R+GEKLFEELL  +E  +     +I+ +K ++I+  +L
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

79) EHR_08910 in NC_018081


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  421 bits (1583),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 276/519 (54%), Positives = 400/519 (78%), Gaps = 10/519 (1%)

Query  57   YGSLFKVFTRINRYMNLEEIRAIFVSLSITMISN-LFVLFFINHQYMLRLTIFTYILSLL  115
            ++ +F ++ R   Y ++ E+  I  S++ ++++  ++V +F ++   LRL ++T ++ LL
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL  117

Query  116  LIMGSRLEWRLYIEKKQTKLQPRATAKKTIIVGAGEGGRILANILLGSK-TASDTYVIGF  174
            LI GSRL WR+Y   ++T +   +  K T+IVG+G GG +L   ++ +   + +  ++  
Sbjct  118  LIGGSRLSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV--  172

Query  175  VDDDPNKQN-TYLSGKKVIGMIKDLPALIKKHDVQIVTIAIPSLSKTKIRNIFQMVESLH  233
            VDDD+NKQ+ +  SG KV G IKD+P L+KK +++ + IAIP+LS+ ++R+I ++ E+ +
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  VKVNTMPSMEEIASGKVSVTKLKKIDVVDLLERDEVELDIESIKGHLTGKTILVTGAGGS  293
            V V  MP++E++ SG + V KLKK++V DLL RD VELD+ SI  +LT KTILVTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSEICRQIIQFSPAQLLLVGHGENSIYLIDRELRMNQQNQQTKIVPLIADIQDRDKINE  353
            IGSEICRQ+ +F+P +++L+GHGENSIY I++EL +   +++  ++P+IAD+QD+++++ 
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKK  351

Query  354  IMQNYRPDIVYHAAAHKHVPLMEVNPKEAVKNNILGTKNVAEAAKQAKVKNFVMVSTDKA  413
            +MQ Y+P +VYHAAAHKHVPLME NP+EA+KNN+LGT+N AEAAK A V +FVMVSTDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  414  NHPPNVMGATKRIAEMIVTGLNEKNG-TTFSAVRFGNVLGSRGSVIPVFREQIAQGGPVT  472
             +PPNVMGA+KR+AEM++ ++N+  + T F AVRFGNVLGSRGSVIP+F+ QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  ITDFRMTRYFMTIPEASRLVIQSGVLAKGGEIFILDMGEPVKIVNLAKNMIRLSGYREDE  532
            +T+  MTRYFMTIPEASRLV+Q+G LA GGEIF+LDMG PVKIV+LAKN+IRLSGY+E++
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IEILETGIRPGeklyeellldkeRNDEAVYEKIFVGNIK  571
            I I  +GIR+GEKL+EELL   E + E VYEKI+ G+++
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQ  570

80) yveM in NC_016047


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  420 bits (1582),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 299/582 (52%), Positives = 427/582 (74%), Gaps = 5/582 (0%)

Query  21   LSYRRRLSMIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFR  80
            +S ++R+ M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F 
Sbjct  4    ISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFD  63

Query  81   QYKQVWTYTGLGELIVLLKGITLSAAVTGVIQYAVY--HTMFFRLLTACWVLQLLSIGGT  138
             Y + W Y++++ELI+++K++T S   TG+I  +++  ++ F+RL    W+++LL IGG+
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGS  122

Query  139  RVLSRVLKESIrkkrsassraLIIGAGSGGTLMVRQLLSKDDPDIIPVAFIDDDQTKHKL  198
            R+  R+ + ++  K +    +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+
Sbjct  123  RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  199  EIM-GLPVIGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVNIKIMPHFD  257
             I  G+ V G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V++  MP+++
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  258  EMLLGTRTAGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQIS  317
            +++ G     +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+ 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  318  PFQPNAIILLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvy  377
             F P+ I+LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVY
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  378  haaahkhvPLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATK  437
            HAAAHKHVPLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  438  RFAEMIIMNLGK-ISRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFM  496
            R AEM+I ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  497  TIPEASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPG  556
            TIPEASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+G
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSG  542

Query  557  EKMYEELLNKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  598
            EK++EELLNK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  543  EKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

81) epsC in NC_000964


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  420 bits (1580),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 296/574 (52%), Positives = 418/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGVIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TG+I  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E++ IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

82) epsC in NC_020507


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  420 bits (1580),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 296/574 (52%), Positives = 418/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGVIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TG+I  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E++ IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

83) BSn5_08105 in NC_014976


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  420 bits (1580),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 297/574 (52%), Positives = 418/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGIIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TGII  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E++ IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

84) A7A1_2654 in NC_019896


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  420 bits (1580),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 297/574 (52%), Positives = 418/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGIIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TGII  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E++ IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

85) epsC in NC_020244


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  420 bits (1580),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 298/574 (52%), Positives = 418/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGIIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TGII  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

86) yveM in NC_017196


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  419 bits (1579),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 297/574 (52%), Positives = 418/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGIIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TGII  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E++ IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

87) epsC in NC_014479


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  419 bits (1579),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 295/574 (52%), Positives = 420/574 (74%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVFAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFRQYKQVWTY  60
            M++ +D+ +V  SVF GY +L   ++ Y    L+L+++ LL+S HV A +F  Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGVIQYAVY--HTMFFRLLTACWVLQLLSIGGTRVLSRVLK  118
            ++++ELI+++K++T S   TG+I  +++  ++ F+RL    W+++LL IGG+R+  R+ +
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKNRSASSRALIIGAGSGGTLMVRQLLSKDDPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  + +    +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVNIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-ISRTKFVAVHFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAV+FGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

88) MY9_3480 in NC_017743


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  418 bits (1575),  Expect = 4e-118, Method: Compositional matrix adjust.
 Identities = 297/574 (52%), Positives = 417/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELLVLLKGITLSAAVTGVIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++EL++++K++T S   TG+I  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFEEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++E+++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFLPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVLHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I +   IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSSTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGVLAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELL  536
            V+QAG LA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQVFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQV+ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

89) Dhaf_4505 in NC_011830


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  417 bits (1568),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 278/578 (49%), Positives = 416/578 (72%), Gaps = 23/578 (3%)

Query  1    MVIDAVLINLAVFLSFYIRFAVDGDGTIPEEYLLTLTHSAWTATLIYLSVFY-IFGLYNK  59
            + ID++++ ++VFL++YI         +   Y + +   +    LI   VF  IF+LY++
Sbjct  14   LFIDSIIVTFSVFLGYYIL------EPFFKGYSINVLILSSLILLISHHVFAQIFDLYHR  67

Query  60   LWQYASIGELISiifavtvaaagtitvvYFIAPMRFPHTVSAL-----MWFSTLFLIGGS  114
             W+YAS++ELI I+ +VT +  +T     +I P+ F +  + L      W   L+LIGGS
Sbjct  68   AWEYASVSELILIVKSVTSSIVATG----IIVPI-FTQQAPFLRLYFITWMMHLLLIGGS  122

Query  115  RFIWRILQDNIFTPHVPGSQNQVLIIGAGDAGVMAARELKNKNYREGRPVGYIDDAATKQ  174
            R+ WRI +  +++ +  G ++  LI+G+G +G +  R++ N  Y    PV  +DD + KQ
Sbjct  123  RLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  175  RLQLM-GIPVLGTRRDIPRVVKNHNIDKIIIAMPSASGDVIREIVGICEKTGVDLKIMPG  233
            ++ +  G+ V G  +DIP +VK+ NI KIIIA+P+ S + +REI  +CE T V++  MP 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  234  VFDVVSGKVDTKEIRQVQVEDLLGREAVTVDLEDVAGYLAGEAVLITGGGGSIGSELCRQ  293
            + +V+SG ++ + +++V+VEDLLGR++V +D+  ++  L+  ++L+TG+GGSIGSE+CRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  294  VARFNPAKLVIVGHGENSVFDIEQELRSE-NPGLDVVTEILDIKDREKVHLVFQRYKPGV  352
            V +F P +++++GHGENS+++I+QEL +  +  ++V+  I D++D+E++  V Q YKP V
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  353  VFHAAAHKHVPLMEKNPEEAMKNNIMGTSNLAEAADAAKVKTFVLISTDKAVNPTSIMGA  412
            V+HAAAHKHVPLME NP+EA+KNN++GT N AEAA  A V  FV++STDKAVNP ++MGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  413  TKRVAEMVIQSMDK-RSDTKYVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTVTHPDMVRY  471
            +KRVAEMVIQSM++  S T +VAVRFGNVLGSRGSVIP FK+QI  GGPVTVTHP+M RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  472  FMTIPEASQLVIQAGSMAQGGEIFILDMGQPVKILDLARDLIRLSGFEPDVDIKIKFTGM  531
            FMTIPEAS+LV+QAG++A GGEIF+LDMG+PVKI+DLA++LIRLSG+  + DI I F+G+
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGI  539

Query  532  RPGEKLFEELLTAEEGTSATKHKRIFVAKPNNINVSQL  569
            R+GEKLFEELL  +E  +     +I+ +K ++I+  +L
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

90) Desde_3866 in NC_018017


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  417 bits (1571),  Expect = 8e-118, Method: Compositional matrix adjust.
 Identities = 276/572 (49%), Positives = 406/572 (71%), Gaps = 15/572 (2%)

Query  3    IDAVLVNLAAFLSFYIRFAVDGDGTIPEEYLLTLTHSAWTATLIYLAVFY-VFGLYNKLW  61
            ID+++V ++ FL++YI         +   Y + +   +    LI   VF  +F+LY++ W
Sbjct  16   IDSIIVTFSVFLGYYIL------EPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAW  69

Query  62   QYASIGELLSII-FavtvatagtvtmvYFIAPMRFPHTVSALMWFSTLFLIGGSRFIWRI  120
            +YAS++EL+ I+    +   A  + +  F     F + +  + W   L+LIGGSR+ WRI
Sbjct  70   EYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGGSRLSWRI  128

Query  121  LQDNIFTPHVPGSQNQVLIIGAGDAGVMAARELKNKNYREGRPVGYIDDAATKQRLQLM-  179
             +  +++ +  G ++  LI+G+G +G +  R++ N  Y    PV  +DD + KQ++ +  
Sbjct  129  YRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  180  GIPVLGTRKDIPRVVKNHNIDKIIIAMPSVSGEIIREIVGICEKTGVDLKIMPGVFDVVS  239
            G+ V G  KDIP +VK+ NI KIIIA+P++S + +REI  +CE T V++  MP + +V+S
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  240  GKVDTTEIRQVQVEDLLGREPVTVDLEDVAGYLTGEVVLITGGGGSIGSELCRQVTRFNP  299
            G ++   +++V+VEDLLGR+PV +D+  ++  LT   +L+TG+GGSIGSE+CRQV +F P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  300  AKLVIVGHGENSVFDIEQELRSE-NPSLDVVTEILDIKDQEKVHIVFQRYKPGVVFHAAA  358
             +++++GHGENS+++I+QEL +  +  ++V+  I D++D+E++  V Q YKP VV+HAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  359  HKHVPLMEKNPEEALKNNVMGTSNLAEAADAVKVKTFVLISTDKAVNPTSIMGATKRVAE  418
            HKHVPLME NP+EA+KNNV+GT N AEAA    V  FV++STDKAVNP ++MGA+KRVAE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  419  MVIQSMDR-RSDTKYVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTVTHPDMVRYFMTIPE  477
            MVIQSM+   S T +VAVRFGNVLGSRGSVIP FK+QI  GGPVTVTHP+M RYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  478  ASQLVIQAGSMAQGGEIFILDMGQPVKILDLARDLIRLSGFEPEVDIKIKFTGMRPGEKL  537
            AS+LV+QAG++A GGEIF+LDMG+PVKI+DLA++LIRLSG+  E DI I F+G+R+GEKL
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKL  545

Query  538  FEELLTAEEGTSATKHKRIFVAKPNNINVSQL  569
            FEELL  +E  +     +I+ +K ++I+  +L
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

91) capD in NC_009009


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  416 bits (1566),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 275/496 (56%), Positives = 380/496 (77%), Gaps = 11/496 (2%)

Query  108  LLSFLLVIASRLTWREIHEFVQHPSALLGKKVDGTKTLVVGSGDGASLFIKTAQQKS-KD  166
            ++ +LL+ +SRL+WR  +       ++++K      TL+VG+G G+SL+I+   + +  +
Sbjct  113  MMHLLLIGGSRLSWRIYR------KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  167  LKIVAIVDDDKNKQN-TYLHGVKVVGTTEQIPEIVGNYEVEQIVIAIPSLAPDDYERIVE  225
            +  V +VDDD NKQ+ +   GVKV G   +IPE+V ++++ +I+IAIP+L+ +    I  
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  226  YCQQTEVKVNAMPKYEQVITGKLSVSKLQEIDIADLLGRKEVKLDQQSLKSNIKCKTVLV  285
             C+ T+V V  MP+ E+V++G + V+KL+ +++ DLLGR  V LD  S+  ++  KT+LV
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  286  TGAGGSIGSELCRQIAQFCPARLLLLGHGENSIYLIHKELSSRYKDDIELIPIIADIQDR  345
            TGAGGSIGSE+CRQ+ +F P R++LLGHGENSIY IH+EL + YK++IE+IPIIAD+QD+
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDK  346

Query  346  ERIFHIMETYRPDRVYHAAAHKHVPLMEYNPTEAVKNNIYGTRNvaeaakaagvakFVMI  405
            ER+  +M++Y+P  VYHAAAHKHVPLMEYNP EA+KNN+ GTRN AEAAK A V+KFVM+
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  406  STDKAVNPPNVMGATKRVAEMVVTSLNEE-GKTLFSAVRFGNVLGSRGSVVPLFKEQIAK  464
            STDKAVNPPNVMGA+KRVAEMV+ S+N+E +KT F AVRFGNVLGSRGSV+PLFK QI  
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  465  GGPITVTDFRMTRYFMTIPEASRLVIQAGALMQGGEVFVLDMGEPVKILDLAKKMITLSG  524
            GGP+TVT+  MTRYFMTIPEASRLV+QAGAL  GGE+FVLDMG PVKI+DLAK++I LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  525  HTEEEIQIQEAGIRPGEKLYEELLSAKEKVNDQVYEKIFVGNVQSLPKTEVDSYVDSLLT  584
              EE+I I+ +GIR+GEKL+EELL+  E   +QVYEKI+ G+VQ + K E+ + +D +L 
Sbjct  527  YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLI  586

Query  585  LGANDLKDSLVKFAQQ  600
               + ++D ++ F ++
Sbjct  587  --NESVRDEIIFFVNN  600

92) yveM in NC_017195


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  416 bits (1567),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 297/574 (52%), Positives = 418/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGVIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TG+I  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIrkkrsassraLIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K +    +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSSTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

93) Desor_5339 in NC_016584


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  416 bits (1567),  Expect = 2e-117, Method: Compositional matrix adjust.
 Identities = 285/585 (49%), Positives = 422/585 (73%), Gaps = 27/585 (4%)

Query  4    RKRTLILMLIDAMLINLAAFGSFYLRFEEGIPLD-YYQTYYQTAIGGTILYLA----VFY  58
            ++R ++L++ID++++ ++ F ++Y+       L+ +++ Y    +  + L L     VF 
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYI-------LEPFFKGYSINVLILSSLILLISHHVFA  59

Query  59   -VFGLYNRLWQYASTGELLSIIYavsvgtggtvaavYFYGLSNAANLPYIRMPHTAAIIL  117
             +F+LY+R W+YAS +EL+ I+ +V+ +  +T   V ++    + + P++R+     +I 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF----TQQAPFLRL----YFIT  111

Query  118  WLAMVFLIGGSRFIWRILQENTYDRHVPGSQKQVLIVGAGDAGVLAARELKNRNYRDGRP  177
            W+  ++LIGGSR+ WRI +     ++  G +K  LIVG+G +G L  R++ N  Y +  P
Sbjct  112  WMMHLLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  178  VGFIDDNHSKQNLHLL-GIPVLGTRKDIARIVKGHNINEVIIAMPSASGESVREIVQICE  236
            V  +DD+ +KQ++ +  G+ V G  KDI+ +VK  NI+ +IIA+P+ S + +REI ++CE
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  237  KSGVQLKIMPGVYDIISGDINVTPIREVQVEDLLGRDPVSVDLEEVAGYVAGETVLVTGA  296
             + V++  MP + +++SG+I+V  ++ V+VEDLLGRDPV +D+  ++  ++  T+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  297  GGSIGSEICRQIARFNPGKLVLLGHGENSIFDIEQELRGE-HPGIDYITEILDIKDREKV  355
            GGSIGSEICRQ+ +F P++++LLGHGENSI++I+QEL G     I+ I  I D++D+E++
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERM  349

Query  356  FLIFNRYKPGVVFHAAAHKHVPLMERNPEEALKNNVVGTQNLAEAADEVKVKTFVAISTD  415
              + + YKP VV+HAAAHKHVPLME NP+EA+KNNV+GT+N AEAA    V  FV +STD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  416  KAVNPTSVMGATKRTAEMLIQSLDL-RSQTKFVAVRFGNVLGSRGSVIPTFKRQIAQGGP  474
            KAVNP +VMGA+KR AEM+IQS++   S+T FVAVRFGNVLGSRGSVIP FK+QI  GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  475  VTVTHPDMVRYFMTIPEASQLVIQAGAMGNGGEIFILDMGKPVKIVDLAKDLIRLSGFEP  534
            VTVTHP+M RYFMTIPEAS+LV+QAGA++ GGEIF+LDMGKPVKIVDLAK+LIRLSG+  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  535  DVDIKIQFTGIRPGEKLFEELLTAEEGVTSTKHSRIFVAKPNGID  579
            + DI I+F+GIR+GEKLFEELL  +E        +I+ +K + I+
Sbjct  530  E-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

94) I653_16690 in NC_020832


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  416 bits (1564),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 297/574 (52%), Positives = 417/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGIIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TGII  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFPLMKKSEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+   P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

95) Desdi_3238 in NC_019903


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  416 bits (1565),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 277/574 (49%), Positives = 413/574 (72%), Gaps = 19/574 (3%)

Query  3    IDAVLVNLAAFLSFYI--RFGFEGNGKIPEEYLLTLTHSAWTATLVYLAVFY-IFGLYNK  59
            ID+++V ++ FL++YI   F F G       Y + +   +    L+   VF  IF+LY++
Sbjct  16   IDSIIVTFSVFLGYYILEPF-FKG-------YSINVLILSSLILLISHHVFAQIFDLYHR  67

Query  60   LWQYASIGELVSIIFavtvgtagtvaLV-YFLAPLRFPHSVSALLWFTTLFLIGGSRFIW  118
             W+YAS++EL+ I+ +VT +  +T  +V  F     F + +  + W   L+LIGGSR+ W
Sbjct  68   AWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGGSRLSW  126

Query  119  RIFQDNIFTQHVPGSQNQVLIIGAGDAGVMAARELKNKNYREGRPVGYIDDAVRKQRLQL  178
            RI++  +++++  G ++  LI+G+G +G +  R++ N  Y    PV  +DD   KQ++ +
Sbjct  127  RIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSI  184

Query  179  M-GIPVLGTRKDIPRVVKNHNIDKIIIAMPSASGEVIREIVGICEKTGVDLKIMPGVFDM  237
              G+ V G  KDIP +VK+ NI KIIIA+P+ S + +REI  +CE T V++  MP + ++
Sbjct  185  ASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENV  244

Query  238  VSGQLDTNEIREVQVEDLLGREPVSVNLEDVAGYLTGEVVLITGGGGSIGSELCRQVARF  297
            +SG+++ N ++ V+VEDLLGR+PV +++  ++  LT   +L+TG+GGSIGSE+CRQV +F
Sbjct  245  MSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKF  304

Query  298  NPAKLVVVGHGENSVFDIEQELR-VDNPTLDVATEILDVKDRDKVHIVFQRYKPGVVFHA  356
             P +++++GHGENS+++I+QEL  + +  ++V   I DV+D++++  V Q YKP VV+HA
Sbjct  305  TPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHA  364

Query  357  AAHKHVPLMEKNPEEALKNNVMGTSNLTEAADEAKVKTFVLISTDKAVNPTSIMGTTKRV  416
            AAHKHVPLME NP+EA+KNNV+GT N +EAA  A V  FV++STDKAVNP ++MG++KRV
Sbjct  365  AAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRV  424

Query  417  AEMVIQSMDK-RSETKFVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTVTHPDMVRFFMTI  475
            AEMVIQSM++  S T FVAVRFGNVLGSRGSVIP FK+QI  GGPVTVTHP+M R+FMTI
Sbjct  425  AEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTI  484

Query  476  PEASQLVIQAGSMAEGGEIFILDMGQPVKILDLARDLISLSGFEPDVDIKIKFTGMRPGE  535
            PEAS+LV+QAG++A GGEIF+LDMG+PVKI+DLA++LI LSG+  + DI I F+G+R+GE
Sbjct  485  PEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGE  543

Query  536  KLYEELLTAEEGTSATKHKRIFVAKPNNINVSQL  569
            KL+EELL  +E  +     +I+ +K ++I+  +L
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

96) epsC in NC_020410


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  415 bits (1563),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 300/594 (51%), Positives = 433/594 (73%), Gaps = 10/594 (1%)

Query  1    MTY---RRRLSMIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAF  57
            M Y   ++R+ M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A 
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  58   MFHQYKQVWTYTGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMIQLLFI  115
            +F+ Y + W Y++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+I
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  116  GGSRMISRVLKETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTK  175
            GGSR+  R+ + T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K
Sbjct  120  GGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  176  HKLKIM-GLPVIGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMP  234
            +K+ I  G+ V G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  235  QFDEILLGTQAAGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICR  294
            ++++++ G      ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  295  QISSFLPHEIVLLGHGENSIYSVHNELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPh  354
            Q+  F P+ I+LLGHGENSIY +H+EL + +  E+   + IAD+QD++++  +M+ Y P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  355  vvyhaaahkhvPLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMG  414
            VVYHAAAHKHVPLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  415  ATKRFAEMVIMNLGK-VSNTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTR  473
            A+KR AEMVI ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  474  YFMTIPEASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGI  533
            YFMTIPEASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  534  RPGEKMYEELLNHNEVHTEQIFPKIHIGKAVDGDWAVLIRFMEEFSRLPEDELR  587
            R+GEK++EELLN +E+H EQ++ KI  GK    +   L   +++F  L ++ +R
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

97) yveM in NC_016784


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  413 bits (1553),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 297/583 (51%), Positives = 427/583 (74%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVTMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTKHKLKIM-GLPV  177
             T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISSFLPHEIV  297
               ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P+ I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIYSVHNELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSIY +H+EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSNTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAIDGDWAVLIRFMEEFSRLPEDELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L ++ +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

98) epsC in NC_015391


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  413 bits (1553),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 276/544 (51%), Positives = 410/544 (76%), Gaps = 11/544 (2%)

Query  23   YRYTSIKDMLIIFISITVSFGATTTLAVLLLDEMSF-RyilliylvslllvsggHIVFRI  81
              Y+S+ ++++I  S+T S+ AT  +  ++ ++ +F R  ++  ++ LLL++G+++  RI
Sbjct  69   WEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRI  128

Query  82   IHDYKTSTSPEKQTAEKIRTLVVGAGDGGNLFIKNIQKNS-TDIKVVGVVDDDEAKHGMR  140
               Y+ +  +  + + K  TL+VG+G GG+L+I+++ + +  ++  V VVDDD  K+ M 
Sbjct  129  ---YRKTFIS--KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  141  LYS-IPILGNISDIPVFTKKLNVEQITIAIPSLKPKQLEKILEICNDINLPVNLMPSIED  199
            + S + + G I DIP + KK+N+ +I IAIP+L  ++L  I  +C++ N+ V  MP+IE+
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  200  VINGKLMVSRFREIDVVDLLGRDEVTLDTKQISEDLFGKTILVSGAGGSIGSEICRIIST  259
            V++G + V++++ ++V DLLGRD V LD   IS +L  KTILV+GAGGSIGSEICR +  
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  260  FAPKKIILLGHGENSIYQIHRELNKNFVGKIDITPVIADVQNRQRMFDIMEMYKPDIVYH  319
            F+P +I+LLGHGENSIY+IH+EL   +   I++ P+IADVQ+++RM  +M+ YKP +VYH
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  320  AAAHKHVPMMESNTFEAVRNNVYGTKNIAEAAKAANVGTFIMISTDKAVNPPNVMGATKR  379
            AAAHKHVP+ME N  EA++NNV GT+N AEAAK A+V+ F+M+STDKAVNPPNVMGA+KR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  380  IAEMIVTSLNEE-GKTNFAAVRFGNVLGSRGSVVPLFKEQIKAGGPVTVTDFRMTRYFMT  438
            +AEM++ S+N+E +KT+F AVRFGNVLGSRGSV+PLFK QI AGGPVTVT+  MTRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  439  IPEASRLVIQAGTLAKGGEIFVLDMGKPVKIVDLAKKVIKLSGFSDDEISVVETGIRPGE  498
            IPEASRLV+QAG+LA GGEIFVLDMGKPVKIVDLAK++I+LSG+ +++I++  +GIR+GE
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGE  543

Query  499  KLYEELLIASENTGEKVFDKIFVGKAVRRSLEEVMSFLKTLDGCSDASLKEQLIYFAKTH  558
            KL+EELL   E   E+V++KI+ GK  +   EE+  + K  D   + S+++++I+F + +
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL--YNKIDDFLINESVRDEIIFFVNNN  601

Query  559  QAAA  562
            +++ 
Sbjct  602  KTGE  605

99) KSO_003295 in NC_020272


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  412 bits (1552),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 297/583 (51%), Positives = 427/583 (74%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTKHKLKIM-GLPV  177
             T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISSFLPHEIV  297
               ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P+ I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIYSVHNELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSIY +H+EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSNTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAIDGDWAVLIRFMEEFSRLPEDELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L ++ +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

100) epsC in NC_022081


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  412 bits (1550),  Expect = 4e-116, Method: Compositional matrix adjust.
 Identities = 300/594 (51%), Positives = 430/594 (73%), Gaps = 10/594 (1%)

Query  1    MTY---RRRLSMIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAF  57
            M Y   ++R+ M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A 
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  58   MFHQYKQVWTYTGIGELLALMKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFI  115
            +F+ Y + W Y++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+I
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  116  GGSRMISRVLKETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTK  175
            GGSR+  R+ + T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K
Sbjct  120  GGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  176  HKLEIM-GLPVIGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMP  234
            +K+ I  G+ V G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  235  QFDEILLGTQAAGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICR  294
            ++++++ G      ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  295  QISAFLPREIVLLGHGENSIHSVHTELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPh  354
            Q+  F P  I+LLGHGENSI  +H EL + +  E+   + IAD+QD++++  +M+ Y P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  355  vvyhaaahkhvPLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMG  414
            VVYHAAAHKHVPLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  415  ATKRFAEMVIMNLGK-VSRTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTR  473
            A+KR AEMVI ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  474  YFMTIPEASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGI  533
            YFMTIPEASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  534  RPGEKMYEELLNHNEVHTEQIFPKIHIGKAVDGNWAVLIRFMEEFSRLPEEELR  587
            R+GEK++EELLN +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

101) epsC in NC_022075


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  411 bits (1546),  Expect = 8e-116, Method: Compositional matrix adjust.
 Identities = 300/594 (51%), Positives = 430/594 (73%), Gaps = 10/594 (1%)

Query  1    MTY---RRRLSMIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAF  57
            M Y   ++R+ M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A 
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  58   MFHQYKQVWTYTGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFI  115
            +F+ Y + W Y++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+I
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  116  GGSRMISRVLKETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTK  175
            GGSR+  R+ + T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K
Sbjct  120  GGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  176  HKLEIM-GLPVIGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMP  234
            +K+ I  G+ V G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  235  QFDEILLGTQAAGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICR  294
            ++++++ G      ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  295  QISAFLPREIVLLGHGENSIHSVHTELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPh  354
            Q+  F P  I+LLGHGENSI  +H EL + +  E+   + IAD+QD++++  +M+ Y P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  355  vvyhaaahkhvPLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMG  414
            VVYHAAAHKHVPLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  415  ATKRFAEMVIMNLGK-VSRTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTR  473
            A+KR AEMVI ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  474  YFMTIPEASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGI  533
            YFMTIPEASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  534  RPGEKMYEELLNHNEVHTEQIFPKIHIGKAVDGNWAVLIRFMEEFSRLPEEELR  587
            R+GEK++EELLN +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

102) Exig_2634 in NC_010556


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  410 bits (1544),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 271/533 (51%), Positives = 387/533 (73%), Gaps = 21/533 (3%)

Query  65   LYRVNWKYASVQEAMTlslslglssiglMVYQNIIFNEV-LERITILSFCIALLLLGAIR  123
            LY+  W YASV E + +  S+  S ++  +   I+ ++  + R+ +++  + LLL+G+ R
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  124  VALRLLGIGQHLRKYALPRRMVKSRKRTLVIGAGRAGRSLVRQLYVSPFHELKPVAFLDD  183
            ++ R+       RK  +++     +K TL++G+GR+G  L+RQ+  +P+  + PV  +DD
Sbjct  124  LSWRIY------RKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  184  DPKNMHFMI-QGIEVVGTTEDLKAVIEKHRIEAIVLAIPSLTQQRRIELITEAKTLCKNV  242
            D+++    I  G+ V G   D+  ++ K  I  I++AIP+L+QQR    + E + LC   
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR----LREINKLCEGT  231

Query  243  Q----TLPMIEELITGKISVSAIRDVSIEDLLGREPVELDISGIKSEIEGRTVLVTGAGG  298
            +     +P IE++++G I V+ ++ V +EDLLGR+PVELD+++I  E+  +T+LVTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  299  SIGSEICRQIIQFNPTTLVLLGHGENSIYLIERELRGL-QFPINLVSIIADVQDRTRLEE  357
            SIGSEICRQ+ +F P  ++LLGHGENSIY I++EL GL +  I++++IIADVQD+ R+  
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  358  VFATHKPQVVFHAAAHKHVPLMEANPYESVKNNVYGTKNVAEVADLFNVERFVMISTDKA  417
            V  + KP VV+HAAAHKHVPLME NP E++KNNV GT+N AE A L +V +FVM+STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  418  VNPTNVMGSTKRIAEMVIQDLGR-RSKTKFAVVRFGNVLGSRGSVIPLFKSQILAGGPVT  476
            VNP NVMG++KR+AEMVIQ +    SKT F  VRFGNVLGSRGSVIPLFK QI AGGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  477  VTHPEMTRFFMTIPEASRLVIQAGILADGGEVFVLDMGEPVKIVDLAKNMIELSGFTEDE  536
            VTHP MTR+FMTIPEASRLV+QAG LA GGE+FVLDMG PVKIVDLAKN+I LSG+ E++
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  537  MPIVFSGIRPGEKMYEELLKDGEVDPEAIYPKIFVGRTRQKESLEHIFALVNQ  589
            + I FSGIR+GEK++EELL+ +E++PE +Y KI+ G+ ++ E  E+++  +++
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEK-EELYNKIDD  583

103) epsC in NC_017190


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  409 bits (1540),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 301/594 (51%), Positives = 430/594 (73%), Gaps = 10/594 (1%)

Query  1    MTY---RRRLSMIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAF  57
            M Y   ++R+ M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A 
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  58   MFHQYKQVWTYTGIGELLALLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFI  115
            +F+ Y + W Y++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+I
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  116  GGSRMISRVLKETIGKKQNDSSraliigagaggtllarqltQKNDLGIMPVAFIDDDQTK  175
            GGSR+  R+ + T+  K+     +LI+G+G GG+LL RQ+ +   +G+ PV  +DDD  K
Sbjct  120  GGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  176  HKLEIM-GLPVIGGKESILPAVQRLRIHHIIIAIPSLRTHELQTLYKECVQTGAHIKIMP  234
            +K+ I  G+ V G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  235  QFDEILLGTQAAGHIRDVNAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICR  294
            ++++++ G      ++ V+ EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  295  QISSFRPREIVLLGHGENSIYSVHGELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPh  354
            Q+  F P  I+LLGHGENSIY +H EL + +  E+   + IAD+QD++++  +M+ Y P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  355  vvyhaaahkhvPLMEHNPEEAVKNNILGTKNVAEAADMCGTETFVLISSDKAVNPANVMG  414
            VVYHAAAHKHVPLME NP+EA+KNN+LGT+N AEAA +     FV++S+DKAVNP+NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  415  ATKRFAEMVIMNLGK-ISRTKFAAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHPAMTR  473
            A+KR AEMVI ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQI  GGPVTVTHP+MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  474  YFMTIPEASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGI  533
            YFMTIPEASRLV+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  534  RPGEKMYEELLNHNEVHTEQIFPKIHIGKAVDGDWAVLIRFMEEFSRLPEEELR  587
            R+GEK++EELLN +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

104) Desmer_4340 in NC_018515


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  408 bits (1537),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 277/585 (48%), Positives = 421/585 (72%), Gaps = 27/585 (4%)

Query  4    RKRTLILMLIDALLINLAAFGSFYLRFDEGIPLD-YYQTYYHTAIGGTILYLA----VFY  58
            ++R ++L++ID++++ ++ F ++Y+       L+ +++ Y    +  + L L     VF 
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYYI-------LEPFFKGYSINVLILSSLILLISHHVFA  59

Query  59   -VFGLYNRLWQYASTGELLSIvyavsvgtggtvaavyFYGLSNADTLSYIRMPHTAAVLL  117
             +F+LY+R W+YAS +EL+ IV +V+ +  +T   V ++    ++  +++R+   +    
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF----TQQAPFLRLYFIT----  111

Query  118  WLAMVFLIGGSRFIWRILQENAFDRHVPGSQKQVLIVGAGDAGVLAARELKNRNYRDGRP  177
            W+  ++LIGGSR+ WRI +   + ++  G +K  LIVG+G +G L  R++ N  Y +  P
Sbjct  112  WMMHLLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  178  IGFIDDNHSKQKLQLL-GIPVLGTRLDIARVVKGHNVDEVIIAMPSASGEAVREIVQICE  236
            +  +DD+ +KQK+ +  G+ V G   DI+ +VK  N+  +IIA+P+ S + +REI ++CE
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  237  KLGVILKIMPGVYDIISGDMNVKPIRQVQVEDLLGRDPVSVDLEEVAGYVAGETVIITGA  296
               V +  MP + +++SG+++V+ +++V+VEDLLGRDPV +D+  ++  ++  T+++TGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  297  GGSIGSEICRQIARFNPGRLVLLGHGENTIFDIEQELRSE-HPGIDYITEILDIKDREKV  355
            GGSIGSEICRQ+ +F P+R++LLGHGEN+I++I+QEL +     I+ I  I D++D+E++
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERM  349

Query  356  FLIFERYKPGVVFHAAAHKHVPLMERNPEEALKNNVVGTQNLAEAADEVKVKTFVSISTD  415
              + + YKP VV+HAAAHKHVPLME NP+EA+KNNV+GT+N AEAA    V  FV +STD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  416  KAVNPTSVMGATKRTSEMIIQSLDL-RSQTKFVAVRFGNVLGSRGSVIPTFKRQIAQGGP  474
            KAVNP +VMGA+KR +EM+IQS++   S+T FVAVRFGNVLGSRGSVIP FK+QI  GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  475  VTVTHPDMVRYFMTIPEAAQLVIQAGAMARGGEIFILDMGKPVKIVDLAKDLIRLSGFEP  534
            VTVTHP+M RYFMTIPEA++LV+QAGA+A GGEIF+LDMGKPVKIVDLAK+LIRLSG+  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  535  DVDIKIQFTGIRPGEKLFEELLTAEEGVTSTKHSRIFVAKPNNID  579
            + DI I+F+GIR+GEKLFEELL  +E        +I+ +K ++I+
Sbjct  530  E-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

105) epsC in NC_017188


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  408 bits (1536),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 299/583 (52%), Positives = 425/583 (73%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLALLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGKKQNDSSraliigagaggtllarqltQKNDLGIMPVAFIDDDQTKHKLEIM-GLPV  177
             T+  K+     +LI+G+G GG+LL RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKKSILPAVQRLRIHHIIIAIPSLRTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G  K I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVNAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISSFRPREIV  297
               ++ V+ EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIYSVHGELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSIY +H EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNILGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN+LGT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-ISRTKFAAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQI  GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAVDGDWAVLIRFMEEFSRLPEEELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

106) epsC in NC_017191


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  408 bits (1536),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 299/583 (52%), Positives = 425/583 (73%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLALLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGKKQNDSSraliigagaggtllarqltQKNDLGIMPVAFIDDDQTKHKLEIM-GLPV  177
             T+  K+     +LI+G+G GG+LL RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKKSILPAVQRLRIHHIIIAIPSLRTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G  K I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVNAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISSFRPREIV  297
               ++ V+ EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIYSVHGELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSIY +H EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNILGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN+LGT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-ISRTKFAAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQI  GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAVDGDWAVLIRFMEEFSRLPEEELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

107) epsC in NC_009725


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  408 bits (1535),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 297/583 (51%), Positives = 424/583 (73%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTKHKLEIM-GLPV  177
             T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISAFLPREIV  297
               ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSVHTELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  +H EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAVDGNWAVLIRFMEEFSRLPEEELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

108) epsC in NC_017061


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  408 bits (1534),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 297/583 (51%), Positives = 424/583 (73%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTKHKLEIM-GLPV  177
             T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISAFLPREIV  297
               ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSVHTELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  +H EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-ISRTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAVDGNWAVLIRFMEEFSRLPEEELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

109) epsC in NC_017912


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  408 bits (1534),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 297/583 (51%), Positives = 424/583 (73%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTKHKLEIM-GLPV  177
             T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISAFLPREIV  297
               ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSVHTELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  +H EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-ISRTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAVDGNWAVLIRFMEEFSRLPEEELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

110) epsC in NC_014551


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  407 bits (1530),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 298/583 (52%), Positives = 424/583 (73%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLALLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGKKQNDSSraliigagaggtllarqltQKNDLGIMPVAFIDDDQTKHKLEIM-GLPV  177
             T+  K+     +LI+G+G GG+LL RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESILPAVQRLRIHHIIIAIPSLRTHELQTLYKECVQTGAHIKIMPQFDEILLGTQA  237
             G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVNAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISSFRPREIV  297
               ++ V+ EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIYSVHGELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSIY +H EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNILGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN+LGT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-ISRTKFAAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T F AVRFGNVLGSRGSVIP+FKKQI  GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAVDGDWAVLIRFMEEFSRLPEEELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

111) B938_16225 in NC_019842


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  407 bits (1532),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 298/583 (52%), Positives = 423/583 (73%), Gaps = 7/583 (1%)

Query  1    MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTY  60
            M++ +D+ +V +SV +GY ++E  +  Y    L+L+++ +LISHHV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGIGELLDLLKGITLSAAVTAAVQYGVF--HTILFRLLAVSWMVQLLFIGGSRMISRVLK  118
            ++++EL+ ++K++T S+ V++++   +F  ++ ++RL  ++WM++LL+IGGSR+  R+ +
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ETIGRKQNDSSRaliigagaggtllVRQLTQKNDLGIMPVAFIDDDQTKHKLEIM-GLPV  177
             T+  K+     +LI+G+G GG+LL+RQ+ +   +G+ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEVLLGTQA  237
             G    I   V+++ I  IIIAIP+L  + L+ + K C  T  ++  MP++++V+ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGHIRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISAFLPREIV  297
               ++ V  EDLLGR PV LD + IS  +  KTILVTGAGGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSVHTELSARFGKEVLFHAEIADIQDRDKIFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  +H EL + +  E+   + IAD+QD++++  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVNPANVMGATKRFAEMVIM  417
            PLME NP+EA+KNN++GT+N AEAA +     FV++S+DKAVNP+NVMGA+KR AEMVI 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSSTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S T F AVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E+I IEFSGIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NHNEVHTEQIFPKIHIGKAVDGNWAVLIRFMEEFSRLPEEELR  579
            N +E+H EQ++ KI  GK    +   L   +++F  L +E +R
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVR  591

112) ECBG_00487 in NC_020995


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  406 bits (1528),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 285/524 (55%), Positives = 395/524 (76%), Gaps = 6/524 (1%)

Query  57   YGSVFRVFSRINRYTNLKEMIAIFLAVSCSAFTCNVIL-FFGDETYSVRLVIFTYFLSLF  115
            ++ +F ++ R   Y+++ E+I I  +V+ S  +  +I+ +F +++  +RL ++T  + L+
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL  117

Query  116  LIIASRLIWRIYIERKNMRGTSNEVVKNTLIVGAGEGGRILYNSFVGSKTASDINIIGFV  175
            LI +SRL WRIY  RK   +      K TLIVG+G GG +L    + +   +   ++   
Sbjct  118  LIGGSRLSWRIY--RKTFISKEGKK-KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  176  DDDPNKRNTYLSGKKVLGCISDLPELIQKYEINMVTIAIPSLSRKKLRSIFSLIEPLHVK  235
            DD  +++ +  SG KV GCI D+PEL++K++I+ + IAIP+LS+++LR I  L E  +V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  236  VNTMPSMEEIASGKISTSRLKKIDVVDLLGRDEVKLDIDSIKDQITGKTILVTGAGGSIG  295
            V  MP++E++ SG I  ++LKK++V DLLGRD V LD+ SI  ++T KTILVTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  296  SEICRQVIQFNPKKLVLLGHGENSIYLIDRELNINFKDNITEIVPVIADIQDREKMFEIM  355
            SEICRQV +F P +++LLGHGENSIY I++EL   +K++I E++P+IAD+QD+E+M  +M
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEI-EVIPIIADVQDKERMKKVM  353

Query  356  NEVKPDIVYHAAAHKHVPLMEYNPREAVKNNIYGtkntaeaakaakvknFVMVSTDKANN  415
            +  KP +VYHAAAHKHVPLMEYNP+EA+KNN+ GT+NTAEAAK A V +FVMVSTDKA N
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  416  PPNVMGATKRISEMIVTGLNEKGC-TKFSAVRFGNVLGSRGSVIPVFREQIAKGGPITVT  474
            PPNVMGA+KR++EM++ ++N+    T F AVRFGNVLGSRGSVIP+F+ QI  GGP+TVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  475  DFRMTRYFMTIPEASRLVIQSGALAKGGEIFILDMGEPVKIVDLAKNMIRLSGYSEEEID  534
            +  MTRYFMTIPEASRLV+Q+GALA GGEIF+LDMG PVKIVDLAKN+IRLSGY EE+I+
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIG  533

Query  535  IIETGIRPGeklyeellldkeRNDEAVFEKIFVGNIKGYSLEEV  578
            I  +GIR+GEKL+EELL   E + E V+EKI+ G+++    EE+
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

113) Desaci_4450 in NC_018068


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  404 bits (1521),  Expect = 8e-114, Method: Compositional matrix adjust.
 Identities = 279/580 (49%), Positives = 416/580 (72%), Gaps = 27/580 (4%)

Query  4    RKRTLILMLIDALLINLAAFGSFYLRFEIFGHIPSQYYQTYYHTAITATILYIA----VF  59
            ++R ++L++ID++++ ++ F ++Y        I   +++ Y    +  + L +     VF
Sbjct  7    KQRFMMLLFIDSIIVTFSVFLGYY--------ILEPFFKGYSINVLILSSLILLISHHVF  58

Query  60   Y-IFGLYNRLWQYASTGELLSIIYavtvgtggtvavvYCYSLFVTKVP-LRMPNSAAVLL  117
              IF+LY+R W+YAS +EL+ I+ +VT +  +T  +V   ++F  + P LR+      + 
Sbjct  59   AQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIV---PIFTQQAPFLRL----YFIT  111

Query  118  WLVMVFLIGGSRFIWRILQENVFDRHVPGSQKQVLIVGAGDAGVLAARELKNRNYRDGRP  177
            W++ ++LIGGSR+ WRI +   + ++  G +K  LIVG+G +G L  R++ N  Y +  P
Sbjct  112  WMMHLLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  178  IGFIDDNRQKQKLQLL-GIPVLGTRKDITRIVKGHNIDEVIIAMPSASGESVREIVQICE  236
            +  +DD+ +KQK+ +  G+ V G  KDI  +VK  NI  +IIA+P+ S + +REI ++CE
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  237  KSGVDLKIMPGVYDIISGDINVKPIRQIQVEDLLGRDPVSVDLEEVAGYVSGETVFITGA  296
             + V++  MP + +++SG+I+V+ +++++VEDLLGRDPV +D+  ++  ++  T+++TGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  297  GGSIGSELSRQVAKFNPGKLILIGHGENSIFEIEQELRAE-RPGIEYITEILDIKDREKV  355
            GGSIGSE+ RQV KF P++++L+GHGENSI++I+QEL +  +  IE I  I D++D+E++
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERM  349

Query  356  FLVFNRYKPGVVFHAAAHKHVPLMERNPEEALKNNVLGTQNLAEAADEYRVKTFVSISTD  415
              V + YKP VV+HAAAHKHVPLME NP+EA+KNNVLGT+N AEAA    V  FV +STD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  416  KAVNPTSIMGATKRTVELMIQSLDR-RSQTKFVAVRFGNVLGSNGSVIPTFKKQIAKGGP  474
            KAVNP ++MGA+KR  E++IQS++   S+T FVAVRFGNVLGS GSVIP FKKQI  GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  475  VTVTHPDMVRYFMTIPEAAQLVIQAGAMAQGGEIFILDMGKPVKILDLAKDLIRLSGFEP  534
            VTVTHP+M RYFMTIPEA++LV+QAGA+A GGEIF+LDMGKPVKI+DLAK+LIRLSG+  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  535  DVDIKIQFTGIRPGEKLYEELLTAEEGITSTKHSRIFVAK  574
            + DI I+F+GIR+GEKL+EELL  +E        +I+ +K
Sbjct  530  E-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

114) STP_0902 in NC_015558


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  403 bits (1516),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 264/488 (55%), Positives = 375/488 (77%), Gaps = 13/488 (2%)

Query  118  PRMIWRMWHEQNLFVKHNKKDQKTKMLVVGAGEGGSAFIQTILNK---SKdidivgivda  174
            +R+ WR+ +  + F+  +K ++K   L+VG+G GGS +I+ ++N    + +  +V   D+
Sbjct  122  SRLSWRIYR--KTFI--SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  175  diNKLGTYLHGIKVLGNKNSIPRLLAEYEVKQVTIAIPSLSGEERESILDICRNANVHVN  234
            + +K++    G+KV G  + IP L+  +++K++ IAIP+LS +    I  +C  +NV+V 
Sbjct  178  NKQKMSI-ASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  235  NMPSIENIVLGNVSLNKFKEIEIADLLGRKEVVLDQTSLNSFFNGKTVLVTGAGGSIGSE  294
            +MP+IEN++ G++ +NK+K +E+ DLLGR  V LD +S++  +  KT+LVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  295  ICRQVSKFNPARILLLGHGENSIYLIHRELSALLKGRIDIVPIIADIQDRDLIFEIMANY  354
            ICRQV KF P RI+LLGHGENSIY IH+EL +L K  I+++PIIAD+QD++ +  +M  Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  355  RPDIVYHAAAHKHVPLMEYNPKEAVKNNIFGTKNVAEAAKAAGIPKFIMVSTDKAVNPPN  414
            +P +VYHAAAHKHVPLMEYNP+EA+KNN++GT+N AEAAK A ++KF+MVSTDKAVNPPN
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  415  VMGATKRFAEMIVTGLNEE-GKTQFAAVRFGNVLGSRGSVVPLFKEQIKKGGPITVTDFR  473
            VMGA+KR AEM++ ++N+E +KT+F AVRFGNVLGSRGSV+PLFK QI  GGP+TVT+  
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  474  MTRYFMTIPEASRLVIQAGFLAKGGEVFVLDMGEPVKILDLAKKVIKLSGHTEEDIKIVE  533
            MTRYFMTIPEASRLV+QAG LA GGE+FVLDMG PVKI+DLAK++I+LSG  EEDI I  
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEF  536

Query  534  SGIRPGEKLYEELLSSNERVSEQIHDKIFVGKVTSKPLAEVEAIISNLDQ-LPTDNLKET  592
            SGIR+GEKL+EELL+ +E  +EQ+ +KI+ GKV      E E + +++D+ L  +++++ 
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQK---IEKEELYNKIDDFLINESVRDE  593

Query  593  LIHFAKQE  600
            +I F +++
Sbjct  594  IIFFVNNN  601

115) SUB1039 in NC_012004


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  401 bits (1507),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 277/501 (56%), Positives = 376/501 (76%), Gaps = 19/501 (3%)

Query  105  RFIFLTYLFSTFLVVLPRMSWRMWHDLNPRYR---kdkekqkkkVLVVGAGEGGSVFIQT  161
            R+ F+T +   +L+  +R+SWR+       YR     KE +KK  L+VG+G GGS++I+ 
Sbjct  106  RLYFITWMMHLLLIGGSRLSWRI-------YRKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  162  IINK---SKdvdiigivdsdvNKFGTYLHGIKVLGNKHSIPRIVADYEVDQVTIAIPSLS  218
            ++N    + +  ++   DS+ +K +    G+KV G    IP +V  +++ ++ IAIP+LS
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSI-ASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLS  217

Query  219  GEERESILDICQQANVPVNNMPSIENIVLGNISLNKYKEIDIADLLGRKEVVLDQSSLLD  278
             +    I  +C+ +NV V +MP+IEN++ G+I +NK K +++ DLLGR  V LD +S+  
Sbjct  218  QQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISK  277

Query  279  YFRDKTVLVTGAGGSIGSEICRQVSKFAPKRLLLLGHGENSIYLIHRELSSKYRESIQVI  338
             + +KT+LVTGAGGSIGSEICRQV KF+P R++LLGHGENSIY IH+EL + Y+E I+VI
Sbjct  278  ELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVI  337

Query  339  PIIADIQDRDLMFKVMHEYKPDVVYHAAAHKHVPLMEYNPREAVKNNIFGTKNVAEAAKA  398
            PIIAD+QD++ M KVM+ YKP VVYHAAAHKHVPLMEYNP+EA+KNN++GT+N AEAAK 
Sbjct  338  PIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKL  397

Query  399  AGIPKFVMVSTDKAVNPPNVMGATKRFAEMIVTGL-NEPGKTQFAAVRFGNVLGSRGSVV  457
            A ++KFVMVSTDKAVNPPNVMGA+KR AEM++ ++ NE +KT+F AVRFGNVLGSRGSV+
Sbjct  398  AEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVI  457

Query  458  PLFKEQIKKGGPITVTDFRMTRYFMTIPEASRLVIQAGYLAKGGEVFVLDMGEPVRILDL  517
            PLFK QI  GGP+TVT+  MTRYFMTIPEASRLV+QAG LA GGE+FVLDMG PV+I+DL
Sbjct  458  PLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDL  517

Query  518  AKKIIKLSGHTEEDIQIVESGIRPGEKLYEELLSTSERVQEQIHDKIFVGRVTSKPLEEV  577
            AK++I+LSG  EEDI I  SGIR+GEKL+EELL+  E   EQ+ +KI+ G+V      E 
Sbjct  518  AKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKI---EK  574

Query  578  EEIINHLDQ-LSETELKETLI  597
            EE+ N +D+ L +  +++ +I
Sbjct  575  EELYNKIDDFLINESVRDEII  595

116) epsC in NC_018520


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  401 bits (1510),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 295/574 (52%), Positives = 417/574 (73%), Gaps = 5/574 (0%)

Query  1    MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGallltavslllsYHVCAFLFNQYKQVWTY  60
            M++ +D+ +V  SV+ GY +L   ++ Y    L+L+++ LL+S HV A +F+ Y + W Y
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  61   TGLGELIVLLKGITLSAAVTGVIQYAVY--HTMFFRLLTACWVLQLLSIGGTRILSRVLN  118
            ++++ELI+++K++T S   TG+I  +++  ++ F+RL    W+++LL IGG+R+  R+  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYR  130

Query  119  ESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIM-GLPV  177
             ++  K      +LI+G+G GG+L++RQ+++    ++ PV  +DDD  K+K+ I  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  178  IGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRT  237
             G    I   V+K++I+ IIIAIP+L  + L+ + K C  T V +  MP++++++ G   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  238  AGQIRDVKAEDLLGRKPVTLDTSEISNRIkgktvlvtgvggSIGSEICRQISAFQPKEII  297
              +++ V  EDLLGR PV LD + IS+ +  KT+LVTG GGSIGSEICRQ+  F P  I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  298  LLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKKYEPhvvyhaaahkhv  357
            LLGHGENSI  I  EL G +  +I     IADVQD+++M  +M+ Y P VVYHAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  358  PLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIM  417
            PLME NP+EA+KNN++GT+N AEAA ++    FV++S+DKAVNP+NVMGA+KR AEM+I 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  418  NLGK-VSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRL  476
            ++ +  S+T FVAVRFGNVLGSRGSVIP+FKKQIE GGPVTVTHP+MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  477  VIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELL  536
            V+QAGALA G +IFVLDMG PVKIVDLAKNLI+LSGY  E++ IEF+GIR+GEK++EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  537  NKNEVHAEQIFPKIHIGKAVDGDWPVLMRFIEDF  570
            NK+E+H+EQ++ KI  GK    +   L   I+DF
Sbjct  551  NKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

117) Dtox_4081 in NC_013216


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  401 bits (1510),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 259/519 (50%), Positives = 380/519 (74%), Gaps = 17/519 (3%)

Query  61   FGLYQRVWAYASIGELVTIVKAVTTGKLVVIALTYFIFTPLPRSVVL--MSWAFSIILIG  118
            F+LY+R W YAS++EL+ IVK+VT++ +V  ++   IFT  +  + L  ++W   ++LIG
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSS-IVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  119  GSRLCWRIYVQKKKFAVAGCPLDKRKTLIVGAGDAGVLVVRELMNHNSEYL---PVGFID  175
            GSRL WRIY  +K F        K+ TLIVG+G +G L++R++MN  + Y+   PV  +D
Sbjct  121  GSRLSWRIY--RKTFISKEG--KKKPTLIVGGGRGGSLLIRQMMN--TPYMGMEPVLVVD  174

Query  176  DDASKQGMVIL-GIPVLGKREELPSIIEKYRIKEVIIAMPSVSGQVIKETVEKCHNSQVK  234
            DD++KQ M I  G+ V G   ++P ++ K+ IK +IIA+P++S Q ++E    C+ ++V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  235  LKILPGVYQLISGQVTVNHIRDIQVEDLLGREPVEVDLSEIAGYLTDRVVLVSGAGGSIG  294
            +  +P + +++SG++ VN ++ ++VEDLLGR+PVE+D++ I+  LT++ +LV+GAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  295  SELCRQVVRFKPKLLVVLGHGENSIHNIVFELREMHGSDLPIEIVIADIRDRQKINLIFK  354
            SE+CRQV +F P  +++LGHGENSI +I  EL  +   ++ +  +IAD++D+++++ + +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  355  KYRPSVVFHAAAHKHVPLMELHPDESVKTNVLGTKNLAEAADRVGTDVFIMLSTDKAVNP  414
             Y+P VV+HAAAHKHVPLME +P+E++K NVLGT+N AEAA       F+M+STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  415  SSVMGATKRLAELILQQMNS-ISDTVYAAVRFGNVLGSNGSVVPIFKRQIAQGGPVTVTH  473
            ++VMGA+KR+AE+++Q MN+  S T + AVRFGNVLGS GSV+P+FK+QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  474  PEMKRYFMTIPEAVQLVIQAGAMAQGGEIFVLDMGEPVKIVDLAKCIIDLSG---VDCEI  530
            P M RYFMTIPEA +LV+QAGA+A GGEIFVLDMG PVKIVDLAK +I LSG    D  I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  531  KFTGIRPGEKLFEELLTAEEGSSATRHRRIFVANAGSVN  569
             F+GIR+GEKLFEELL  +E  +     +I+ ++   ++
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

118) DHBDCA_p2687 in NC_018866


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  400 bits (1504),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 272/582 (47%), Positives = 399/582 (69%), Gaps = 22/582 (3%)

Query  5    KRTLFFMLTDAILINLALFLSFYLRLSEEADLQVEFVKYLGTYLNAAIVSTFVLIVVF-H  63
            +R + +++ D+I++ +++FL++Y+       L+  F  Y    L  + +  ++   VF +
Sbjct  8    QRFMMLLFIDSIIVTFSVFLGYYI-------LEPFFKGYSINVLILSSLILLISHHVFAQ  60

Query  64   FFGLYKNIWRYASVRELLSIVYAVTVGAALTVMVVYFISPLRLPHSVSVYF--WLMLIVL  121
            +F+LY   W YASV EL+ IV +VT +   T ++V +++  + +  + +YF  W+M ++L
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPFLRLYFITWMMHLLL  118

Query  122  IGGLRFSQRMRQENAIFAVSNRSQRKVLIIGAGDAGVLALRELKKRDFQEGVPVGFIDDS  181
            IGG R+S R+ +    F   +  ++  LI+G+G +G L +R++ +  +    PV  +DD 
Sbjct  119  IGGSRLSWRIYRKT--FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  182  KSKINLHV-QGFPVLGSRDDIRRIVEDYAVDEIIIAIPSADGETVREIVEICKETRAVLK  240
             +K ++ +  G  V G   DI  +V  + +  IIIAIP+   + +REI  +C  T   + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  241  IMPGVYDILSGKITVSSLREVQVEDLLGREQVSVDLEEVAGYLKNQVVLVTGAGGSIGSE  300
             MP + +++SG I V+ L+ V+VEDLLGR+ V +D+  ++  L ++ +LVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  301  LCRQIVKFFPSKLILAGHGENCIFDIEQEL-----KNSPIVTEIFDIKDAGKVNLVFEKY  355
            +CRQ+ KF P +++L GHGEN I++I+QEL      +  ++  I D++D  +++ V + Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  356  KPYVVFHAAAHKHVPLMEVNPEEALKNNVMGTSNLAAAADKNGVRTFVLISTDKAVNPTS  415
            KPYVV+HAAAHKHVPLME NP+EA+KNNV+GT N A AA    V  FV++STDKAVNP +
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  416  IMGASKRMAEMVIQDYDK-RSETKFVAVRFGNVLGSRGSVIPTFKKQIMAGGPVTVTDPR  474
            +MGASKR+AEMVIQ  ++  S T FVAVRFGNVLGSRGSVIP FKKQI AGGPVTVT+P 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  475  MTRYFMTIPEASQLVIQAGAMASGGEIFILDMGKPVKIVDLAKDLIRLSGFEPGKDIQIE  534
            MTRYFMTIPEAS+LV+QAGA+A+GGEIF+LDMGKPVKIVDLAK+LIRLSG+    DI IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIE  535

Query  535  FTGVRPGEKLFEEILTSEEGTTATKHKRIFVARPNHIDHEAI  576
            F+G+R+GEKLFEE+L  +E        +I+ ++ + I+ E +
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

119) I872_09825 in NC_021175


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  399 bits (1502),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 275/525 (53%), Positives = 394/525 (76%), Gaps = 13/525 (2%)

Query  35   TKLFSIINRYTDYKTLSTISLTLVGTYFIVFLVELALSL---HTSY-RFLLLSCMFSILF  90
            +++F + +R  +Y ++S + L + +    +    + +++   ++++ R+ +++ M  +L+
Sbjct  59   AQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLL  118

Query  91   TMSIRLCWRMWFSFKNGTTYTEVEESKVSRTLVVGAGDGGSLFIKTALKES-PELKIIAV  149
              + RL WR+   +++  T+    E+K   TL+VG+G GGSL+I+  ++ +   +  + V
Sbjct  119  IGGSRLSWRI---YRK--TFIS-KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  150  VDSDTSKQG-SFLHGVKVVGTDKQIPEIVANYEISQIVLAIPSLKPDEYEQIFSLCKKTG  208
            VD D++KQ  S+  GVKV G  K+IPE+V +++I +I++AIP+L  +   +I  LC  T 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  209  AKVSAMPKYEEVVTGKLKVHKLREIDIADLLGRKEVRLDQTSLQSNIDGKTILVTGAGGS  268
              V  MP+ E+V++G + V+KL+ +++ DLLGR  V LD +S+  ++  KTILVTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  269  IGSELCRQIARFSPARLLLLGHGENSIYLIHKELLAQYGDKVEIVPLIADIQDRERIFHI  328
            IGSE+CRQ+ +F+P R++LLGHGENSIY IH+EL++ Y + +E++P+IAD+QD+ER+  +
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  329  MHEYQPDRVYHAAAHKHVPLMEYNPTEAVKNNIYGTknvaeaakaagvakfvmvSTDKAV  388
            M+ Y+P  VYHAAAHKHVPLMEYNP EA+KNN+ GT+N AEAAK A V+KFVMVSTDKAV
Sbjct  353  MQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  389  NPPNVMGATKRVAEMIVTSLNEE-GKTLFAAVRFGNVLGSRGSVVPLFKEQIANGGPITV  447
            NPPNVMGA+KRVAEM++ S+N+E +KT F AVRFGNVLGSRGSV+PLFK QI  GGP+TV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  448  TDFRMTRYFMTIPEASRLVIQAGALMHGGEIFVLDMGEPVKILDLAKKMITLSGHTEEEI  507
            T+  MTRYFMTIPEASRLV+QAGAL  GGEIFVLDMG PVKI+DLAK++I LSG  EE+I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  508  QIVEAGIRPGEKLYEELLSTEERVDEQIYEKIFVGNVQALPNSEV  552
             I  +GIR+GEKL+EELL+ +E   EQ+YEKI+ G+VQ + + E+
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

120) TEH_03930 in NC_016052


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  399 bits (1502),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 289/554 (53%), Positives = 414/554 (75%), Gaps = 13/554 (2%)

Query  56   IFGYVFRVFTRINRYTNLREilaillattgtalgnaiYLLSFSE--AFSKRLILFTYILS  113
            +F+ +F ++ R   Y+++ E++ I+ + T++ ++ +I +  F++  +F  RL ++T ++ 
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL-RLYFITWMMH  115

Query  114  AFFIILSRLAWRLFVERRNMHTAKDQPAKRTLIVGAGEGGRVLYNSFLGSKTASDIQVVG  173
             ++I  SRL+WR++   R+   +K+   K TLIVG+G GG +L    + +   + ++ V 
Sbjct  116  LLLIGGSRLSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG-MEPVL  171

Query  174  FVDDDPNKQKVYL-SNVKVLGKMKDLPQLVGKYQIDMVTIAIPSLPRKRLREVFDLLENN  232
             VDDD+NKQK+ + S VKV G +KD+P+LV K++I  + IAIP+L+++RLRE+  L E  
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  233  PVTVNTMPSMEEMAAGKINISKLKEIDVVDLLGRDEAKLDVASIKDQITDKIILVTGAGG  292
             V V  MP++E++ +G I+++KLK ++V DLLGRD   LD+ASI  ++T+K ILVTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  293  SIGSEITRQVIQFNPRQLILLGHGENSIYLIHRELSARFKERTTELVPIIADVQNREKIF  352
            SIGSEI RQV +F P +++LLGHGENSIY IH+EL + +KE   E++PIIADVQ++E++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERMK  350

Query  353  EVMSKYQPDIVYHAAAHKHVPLMEFNPKEAVKNNVYGTKNVAEAAKAHAVEQFVMVSTDK  412
             VM  Y+P +VYHAAAHKHVPLME+NP+EA+KNNV GT+N AEAAK   V +FVMVSTDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  413  ANNPPNVMGATKRIAEMIVTGM-NEKETTKFSAVRFGNVLGSRGSVIPLFREQLANGGPL  471
            A NPPNVMGA+KR+AEM++ +M NE   T F AVRFGNVLGSRGSVIPLF+ Q+  GGP+
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  472  TVTDFRMTRYFMTIPEASRLVIQSGALANGGEVFVLDMHEPVKILDLAKNMVRLSGYSED  531
            TVT+  MTRYFMTIPEASRLV+Q+GALA GGE+FVLDM  PVKI+DLAKN++RLSGY E+
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  532  DIEIVETGIRPGeklyeellldkeRSEEQVHDQIFVGNVNGYSLDEVLE-FVDYLPDNDE  590
            DI I  +GIR+GEKL+EELL   E   EQV ++I+ G+V+    +E+ + + D+L   +E
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL--INE  588

Query  591  QLANEVVNFANSSN  604
             + +E++ F N+++
Sbjct  589  SVRDEIIFFVNNNK  602

121) DCF50_p2698 in NC_018867


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  398 bits (1499),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 271/576 (48%), Positives = 395/576 (69%), Gaps = 22/576 (3%)

Query  1    MLTDAILINLALFLSFYLRLSEEADLQVEFVKYLGTYLNAAIVSTFVLIVVF-HFFGLYK  59
            ++ D+I++ +++FL++Y+       L+  F  Y    L  + +  ++   VF ++F+LY 
Sbjct  14   LFIDSIIVTFSVFLGYYI-------LEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  60   NIWRYASVRELLSIVYAVTVGAALTVMVVYFISPLRLPHSVSVYF--WLMLIVLIGGLRF  117
              W YASV EL+ IV +VT +   T ++V +++  + +  + +YF  W+M ++LIGG R+
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPFLRLYFITWMMHLLLIGGSRL  124

Query  118  SQRMRQENAIFAVSNRSQRKVLIIGAGDAGVLALRELKKRDFQEGVPVGFIDDSKSKINL  177
            S R+ +    F   +  ++  LI+G+G +G L +R++ +  +    PV  +DD  +K ++
Sbjct  125  SWRIYRKT--FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  178  HV-QGFPVLGSRDDIRRIVEDYAVDEIIIAIPSADGETVREIVEICKETRAVLKIMPGVY  236
             +  G  V G   DI  +V  + +  IIIAIP+   + +REI  +C  T   +  MP + 
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  237  DILSGKITVSSLREVQVEDLLGREQVSVDLEEVAGYLKNQVVLVTGAGGSIGSELCRQIV  296
            +++SG I V+ L+ V+VEDLLGR+ V +D+  ++  L ++ +LVTGAGGSIGSE+CRQ+ 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  297  KFFPSKLILAGHGENCIFDIEQEL-----KNSPIVTEIFDIKDAGKVNLVFEKYKPYVVF  351
            KF P +++L GHGEN I++I+QEL      +  ++  I D++D  +++ V + YKPYVV+
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  352  HAAAHKHVPLMEVNPEEALKNNVMGTSNLAAAADKNGVRTFVLISTDKAVNPTSIMGASK  411
            HAAAHKHVPLME NP+EA+KNNV+GT N A AA    V  FV++STDKAVNP ++MGASK
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  412  RMAEMVIQDYDK-RSETKFVAVRFGNVLGSRGSVIPTFKKQIMAGGPVTVTDPRMTRYFM  470
            R+AEMVIQ  ++  S T FVAVRFGNVLGSRGSVIP FKKQI AGGPVTVT+P MTRYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  471  TIPEASQLVIQAGAMASGGEIFILDMGKPVKIVDLAKDLIRLSGFEPGKDIQIEFTGVRP  530
            TIPEAS+LV+QAGA+A+GGEIF+LDMGKPVKIVDLAK+LIRLSG+    DI IEF+G+R+
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRS  541

Query  531  GEKLFEEILTSEEGTTATKHKRIFVARPNHIDHEAI  566
            GEKLFEE+L  +E        +I+ ++ + I+ E +
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

122) SCIM_1578 in NC_018073


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  391 bits (1472),  Expect = 6e-110, Method: Compositional matrix adjust.
 Identities = 285/578 (50%), Positives = 430/578 (75%), Gaps = 15/578 (2%)

Query  7    QKRVILMIVDAALLYISGYIAYFFLSEYIETSNDMLFKTLSSIVVIYLLLGLITRVFSII  66
            Q+ ++L+++D+ ++ +S +++Y++L  ++   +  ++   S I++I     +++++F + 
Sbjct  8    QRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLI--SHHVFAQIFDLY  65

Query  67   NRYTDYKTLSKISLIL--LGTYLITA--LVELFLSIIISYRFLLLSCMFSILFTISIRLA  122
            +R  +Y ++S + LI+  + + ++++  +V +F       R+ +++ M  +L+  + RL+
Sbjct  66   HRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLS  125

Query  123  WRMWHSLKNGVNYEEVTNLNVRRTLVVGAGDGGNLFITTALKDS-PDLkivaivdkdvkk  181
            WR+ +  K  ++ E     + + TL+VG+G GG+L+I   ++ +  ++  V +VD D +K
Sbjct  126  WRIYR--KTFISKEG----KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  182  QG-SFLHGVKVVGSDEQIPEIVANYEINQIVIAIPSLKPEEYEHLLELCKKTAAKVSTIP  240
            Q  S+  GVKV G   +IPE+V +++I++I+IAIP+L  +   ++  LC  T   V  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  241  KYEEVVTGKLSVSKLREIDIADLLGRKEVKLDQTSLNSNLKGKTVLVTGAGGSIGSELCR  300
            + E+V++G + V+KL+ +++ DLLGR  V LD +S++ +L  KT+LVTGAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  301  QIARFFPKRLLLLGHGENSIYVIHKELLAQYKDTIEIVPIIADIQDRERIFKLMETYHPD  360
            Q+ +F P R++LLGHGENSIY IH+EL++ YK+ IE++PIIAD+QD+ER+ K+M++Y P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  361  RVYHAAAHKHVPLMEYNPTEAVKNNIYGTknvaeaakaagvakfvMISTDKAVNPPNVMG  420
             VYHAAAHKHVPLMEYNP EA+KNN+ GT+N AEAAK A V+KFVM+STDKAVNPPNVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  421  ATKRVAEMIVTSLNEE-GKTLFAAVRFGNVLGSRGSVVPLFKEQIAKGGPITVTDFRMTR  479
            A+KRVAEM++ S+N+E +KT F AVRFGNVLGSRGSV+PLFK QI  GGP+TVT+  MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  480  YFMTIPEASRLVIQAGALMHGGEIFVLDMGEPVKILNLAKKMITLSGHTENEIKIVESGI  539
            YFMTIPEASRLV+QAGAL  GGEIFVLDMG PVKI++LAK++I LSG  E++I I  SGI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  540  RPGEKLYEVLLSSEERKAEQIYEKIFVGNVHALSKEEV  577
            R+GEKL+E LL+ +E  +EQ+YEKI+ G+V+ + KEE+
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

123) SIR_1783 in NC_022246


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  391 bits (1472),  Expect = 6e-110, Method: Compositional matrix adjust.
 Identities = 289/607 (48%), Positives = 442/607 (73%), Gaps = 25/607 (4%)

Query  7    QKRVILMIVDAALLYISGYIAYFFLSEYIETSNDMLFKTLSSIVVIYLLLGLITRVFSII  66
            Q+ ++L+++D+ ++ +S +++Y++L  ++   +  ++   S I++I     +++++F + 
Sbjct  8    QRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLI--SHHVFAQIFDLY  65

Query  67   NRYTDYKTLSKISLIL--LGTYLITA--LVELFLSITISYRFLLLSCMFSILFTISIRLA  122
            +R  +Y ++S + LI+  + + ++++  +V +F   +   R+ +++ M  +L+  + RL+
Sbjct  66   HRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLS  125

Query  123  WRMWHSLKNGVNYEEVTNLNVHRTLVVGAGDGGNLFITTALKDS-PDLkivaivdkdvkk  181
            WR+ +  K  ++ E   +     TL+VG+G GG+L+I   ++ +  ++  V +VD D +K
Sbjct  126  WRIYR--KTFISKEGKKK----PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  182  QG-SFLHGVKVVGSDEQIPEIVANYEINQIVIAIPSLKPEEYEHLLELCKKTAAKVSTIP  240
            Q  S+  GVKV G   +IPE+V +++I++I+IAIP+L  +   ++  LC  T   V  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  241  KYEEVVTGKLSVSKLREIDIADLLGRKEVKLDQTSLNSNLKGKTVLVTGAGGSIGSELCR  300
            + E+V++G + V+KL+ +++ DLLGR  V LD +S++ +L  KT+LVTGAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  301  QIARFFPKRLLLLGHGENSIYVIHKELLAQYKDTIEIVPIIADIQDRERIFKLMETYHPD  360
            Q+ +F P R++LLGHGENSIY IH+EL++ YK+ IE++PIIAD+QD+ER+ K+M++Y P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  361  RVYHAAAHKHVPLMEYNPTEAVKNNIYGTknvaeaakaagvakfvMISTDKAVNPPNVMG  420
             VYHAAAHKHVPLMEYNP EA+KNN+ GT+N AEAAK A V+KFVM+STDKAVNPPNVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  421  ATKRVAEMIVTSLNEE-GKTLFAAVRFGNVLGSRGSVVPLFKEQIAKGGPITVTDFRMTR  479
            A+KRVAEM++ S+N+E +KT F AVRFGNVLGSRGSV+PLFK QI  GGP+TVT+  MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  480  YFMTIPEASRLVIQAGALMHGGEIFVLDMGEPVKILNLAKKMITLSGHTENEIKIVESGI  539
            YFMTIPEASRLV+QAGAL  GGEIFVLDMG PVKI++LAK++I LSG  E++I I  SGI
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  540  RPGEKLYEVLLSSEERKAEQIYEKIFVGNVHALSKEE----VDAFICSISNLDGQELKEK  595
            R+GEKL+E LL+ +E  +EQ+YEKI+ G+V+ + KEE    +D F      L  + +++ 
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF------LINESVRDE  593

Query  596  LVHFAQQ  602
            ++ F ++
Sbjct  594  IIFFVNN  600

124) Mahau_0321 in NC_015520


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  391 bits (1470),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 252/510 (50%), Positives = 373/510 (74%), Gaps = 10/510 (1%)

Query  62   VFGLYDSLWRYASVDDMVSI--TLATGLGTAINMAGLYLITIRFPRSIYLLSWLFTLLLV  119
            +F+LY+  W YASV +++ I  ++++++ ++  +  ++     F R +Y+++W+  LLL+
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLI  119

Query  120  GSSRLIFRGVAFYRPILSREPKQQNKVLIVGAGEAGAMVIKELKKHRELGMVPVAIIDDD  179
            G+SRL  R   +YR  +     +++  LIVG+G +G+++I+++ +   +GM PV ++DDD
Sbjct  120  GGSRLSWR---IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  180  DNKQHGRL-HGVPVLGRREDIAEIARELHIDQIIIAIPSASRDELRSILDECKKTRCRLK  238
             NKQ   +  GV V G   DI+E+ + ++I +IIIAIP+ S++ LR I   C  T   + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  239  IMPGVYEVINGDVTINQIRDVKVEDLLGRAPVELDTQSIAGYLTNAVVLITGGGGSIGSE  298
             MP + +V++G++ +N+++ V VEDLLGR PVELD  SI+  LT+  +L+TG+GGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  299  LCRQIARFNPKQLLIFDIYENGAYDVQNELKIHY-PSLDLKVLIGSIRDRARLDSIFEQY  357
            +CRQ+ +F P ++++++  EN+ Y++++EL   Y   +++  +I+ ++D+ R+  + + Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  358  KPDVVFHAAAHKHVPLMEENPTEAIKNNVFGTLNVAEMADKHGAKRFVLISTDKAVNPTN  417
            KP VV+HAAAHKHVPLME NP EAIKNNV+GT N AE A      +FV++STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  418  VMGATKRVAEMLIQAMAKH-SNTIFAAVRFGNVLGSNGSVIPLFKRQIAEGGPVTVTHPD  476
            VMGA+KRVAEM+IQ+M ++ S+T F AVRFGNVLGS GSVIPLFK+QI  GGPVTVTHP+
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  477  ITRYFMTIPEAAQLVIQAGAMAHGGEIFVLDMGQPVKILDLARDLIKLSGLEPDKDIKIE  536
            +TRYFMTIPEA++LV+QAGA+A GGEIFVLDMG+PVKI+DLA++LI+LSG   + DI IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIE  535

Query  537  FTGLRPGEKLYEELLMAEEGLQATKHKKIY  566
            F+G+R+GEKL+EELL  +E        KIY
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIY  565

125) Dtox_3994 in NC_013216


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  389 bits (1462),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 261/523 (50%), Positives = 381/523 (73%), Gaps = 17/523 (3%)

Query  61   FGLYQRVWAYASIGELVTIVKAVTTGKLVVIALTYFIFTPLPRSVVL--MSWAFSIILIG  118
            F+LY+R W YAS++EL+ IVK+VT++ +V  ++   IFT  +  + L  ++W   ++LIG
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSS-IVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  119  GSRLYWRIYMQKKKFIVAGCPLDKRKTLIVGAGDAGVLVVRELMNHNSEYL---PVGFID  175
            GSRL WRIY  +K FI       K+ TLIVG+G +G L++R++MN  + Y+   PV  +D
Sbjct  121  GSRLSWRIY--RKTFISKEG--KKKPTLIVGGGRGGSLLIRQMMN--TPYMGMEPVLVVD  174

Query  176  DDASKQGMVIL-GIPVLGKREELPSIIEKCRIKEVIIAMPSVSGQVIKETVEKCHNSRVK  234
            DD++KQ M I  G+ V G   ++P ++ K  IK +IIA+P++S Q ++E    C+ + V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  235  LKILPGVYQLISGQVTVNHIRDIQVEDLLGREPVEVDLSEIAGYLTDRVVLVSGAGGSIG  294
            +  +P + +++SG++ VN ++ ++VEDLLGR+PVE+D++ I+  LT++ +LV+GAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  295  SELCRQvvrlkpkllvvlGHGENSIHNIVFELREMHGSDLPIEIVIADIRDRQKINLIFK  354
            SE+CRQV ++ P  +++LGHGENSI +I  EL  +   ++ +  +IAD++D+++++ + +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  355  KYRPSVVFHAAAHKHVPLMELHPDESVKTNVLGTKNLAEAADRVGTDVFIMLSTDKAVNP  414
             Y+P VV+HAAAHKHVPLME +P+E++K NVLGT+N AEAA       F+M+STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  415  SSVMGATKRLAELILQQMNS-ISDTVYAAVRFGNVLGSNGSVVPIFKRQIAQGGPVTVTH  473
            ++VMGA+KR+AE+++Q MN+  S T + AVRFGNVLGS GSV+P+FK+QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  474  PEMKRYFMTIPEAVQLVIQAGAMAQGGEIFVLDMGEPVKIVDLAKCIIDLSG---VDCEI  530
            P M RYFMTIPEA +LV+QAGA+A GGEIFVLDMG PVKIVDLAK +I LSG    D  I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  531  KFTGIRPGEKLFEELLTAEEGSSATRHRRIFVANAGSVDLETL  573
             F+GIR+GEKLFEELL  +E  +     +I+ ++   ++ E L
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

126) Desmer_4120 in NC_018515


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  388 bits (1460),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 271/608 (45%), Positives = 424/608 (70%), Gaps = 25/608 (4%)

Query  13   FMKFNRKSLALMLIDGVLVNLAAFGSFYLRFEGDIPQEYFLTY-----YHTAWAGTLIYL  67
            ++ ++++ + L++ID+++V ++ F ++Y      I + +F  Y       ++    +   
Sbjct  3    YISIKQRFMMLLFIDSIIVTFSVFLGYY------ILEPFFKGYSINVLILSSLILLISHH  56

Query  68   VIFSLFGLYKRLWQYASINELLSIVYAVTVG-TSSVILVIYFLAPMRYPNTVAVLLWLTT  126
            V+  +F+LY R W+YAS++EL+ IV +VT +  ++ I+V  F     +   +  + W+  
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMH  115

Query  127  TFLIGGSRFLGRILQDSVFNLHLSGIPKRVliigagdagalaVRELKNSNYREGYPIGII  186
             +LIGGSR L++ +    F +   G  K  LI+G+G +G+L +R++ N+ Y    P+ ++
Sbjct  116  LLLIGGSR-LSWRIYRKTF-ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  187  DDAPEKQKLKLM-GIPVLGTRKDITRVVKSHEIEEVIIAMPSAPGDVIRDMTEICEKSGI  245
            DD ++KQK+ +  G+ V G  KDI  +VK  +I  +IIA+P+ + + +R++  +CE + +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  246  VIRIIPGIYNYFSGLVDSLKIREVQIEDLLGREQVNLDIEEVAGYLEGETVLITGAGGSI  305
             +  +P I N  SG ++  K++ V++EDLLGR+ V+LD+  ++  L   T+L+TGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  306  GSELCRQICRFNPQKLILVGRGENSIFDVEQELRSEC-PEINLVTEILDVKDREKVELVF  364
            GSE+CRQ+C+F P++++L+G+GENSI++++QEL +    EI+++  I DV+D+E++  V 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  365  RRFKPGVVFHAAAHKHVPLMERNPEEALKNNILGTYNVAEISDAAHVKIFVLISTDKAIN  424
            + +KP VV+HAAAHKHVPLME NP+EA+KNN+LGT N AE +  A+V  FV++STDKA+N
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  425  PTSIMGATKRVAEMIIQSFDEQ-SQTRFVAVRFGNVLGSRGSVIPTFKKQIAKGGPVTVT  483
            P ++MGA+KRVAEM+IQS +++ S+T FVAVRFGNVLGSRGSVIP FKKQI  GGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  484  HPEMVRYFMTIPEAAQLVIQAGAMARGGEVFILDMGKPVKIVDLARDLIRLSGFDVDVDV  543
            HP M RYFMTIPEA++LV+QAGA+A GGE+F+LDMGKPVKIVDLA++LIRLSG+  + D+
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDI  532

Query  544  KIEYTGIRPGEKLFEELLTAEEGTTSTKHQRIFVAKPNGINVAGIEGLVQLIRERGSYLT  603
             IE++GIR+GEKLFEELL  +E       ++I+ +K + I+        +L    + +L 
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE------ELYNKIDDFLI  586

Query  604  REEIIQEL  611
             E + +E+
Sbjct  587  NESVRDEI  594

127) cps9E in NC_021904


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  387 bits (1457),  Expect = 8e-109, Method: Compositional matrix adjust.
 Identities = 274/607 (46%), Positives = 439/607 (73%), Gaps = 17/607 (2%)

Query  8    IILMLVDTILIALANGIAFYFVDHYITLSGLYLVVTILAEIIL-YLVIANGARVFSKINR  66
            ++L+++D+I+++++  +++Y+++ ++   ++ +++     +++   V+A+   ++ +   
Sbjct  11   MMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWE  70

Query  67   YTSIKEVGSIVLAITGAYVIAGIGLAVL--RVSFSLRHLVLTYLFAIMFIAGSRLVWRYY  124
            Y+S+ E+  IV ++T++ V +GI ++++  + +F LR   +T +  +++I+GSRL WR Y
Sbjct  71   YASVSELILIVKSVTSSIVATGIIVPIFTQQAPF-LRLYFITWMMHLLLIGGSRLSWRIY  129

Query  125  VEYRLHRHGLQTGRFVPTLLVGAGDGARVLLDRLTYDQP--NVNVIGLVDDDPDKQNTWL  182
                + ++G +     PTL+VG+G G+ +L+ ++  + P   ++ + +VDDD++KQ+  +
Sbjct  130  RKTFISKEGKKK----PTLIVGGGRGGSLLIRQMM-NTPYMGMEPVLVVDDDSNKQKMSI  184

Query  183  -HGVKVLGGLKNLPSLIKKNEIEQVTVAIPSLPATGYEKILASLKDSKVKVNRMPKVSDI  241
              GVKV G +K++P L+KK +I ++ +AIP+L+      I     +++V V +MP++ ++
Sbjct  185  ASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENV  244

Query  242  LLDRSNLGQLEDIDVADLLERPEVKLDMTQISDKITAKVIMVTGAGGSIGSEIVRQVSKF  301
            + +  ++ +L  ++V DLL R  V LDM+ IS  +T K I+VTGAGGSIGSEI RQV KF
Sbjct  245  MSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKF  304

Query  302  RPKQVLLLGHGENSIYMINREMRQRYPDAHIEFVPVIGDVQDRKLMFSLMAKYKPDTVYH  361
             P +++LLGHGENSIY I++E+   Y + +IE +P+I+DVQD+  M  +M  YKP  VYH
Sbjct  305  TPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  362  AAAHKHVPLMEYNPHEAVKNNVFGTknvadaakaanvGNFVMVSTDKAVNSSSVMGSTKR  421
            AAAHKHVPLMEYNP+EA+KNNV+GT+N A+AAK A+V++FVMVSTDKAVN+++VMG++KR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  422  MAEMIVTS-ENEPGKTKFAVVRFGNVLGSRGSVVPLFKRQIKAGGPLTLTDRRMTRYFMT  480
            +AEM++ S +NE +KT F  VRFGNVLGSRGSV+PLFK+QI AGGP+T+T+  MTRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  481  IPEASRLVIQAGALAKGGELFILDMDKPVRILDLAKKVIRLSGHTEEEIGIKEVGMRPGE  540
            IPEASRLV+QAGALA GGE+F+LDM+KPV+I+DLAK++IRLSG  EE+IGI   G+R+GE
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGE  543

Query  541  KLYEELVTDVEATNKKVYDKISLGHVSKYDTTKIIEFAQHLLTLSDEELEKEIVAY-SNQ  599
            KL+EEL+   E    +VY+KI  G V K +   + +  +++L   +E +  EI+ + +N+
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLI--NESVRDEIIFFVNNN  601

Query  600  HNGQDKV  606
              G++K 
Sbjct  602  KTGEEKC  608

128) EHR_10200 in NC_018081


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  386 bits (1452),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 278/540 (52%), Positives = 395/540 (74%), Gaps = 11/540 (2%)

Query  57   YGGIFKVFTRINRYTNLNELLGIFAALTFMLFSIFPLFYLFNQELMYQISLRLVVFSYIM  116
            ++ IF ++ R   Y++++EL+ I  ++T  + +   +  +F Q+  +   LRL  ++ +M
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPF---LRLYFITWMM  114

Query  117  ALLLVASSRLGWRVWVELKNKNGRSNEKKVRILIIGAGDGGQLLYQSFLGSQIVNNIEVV  176
             LLL+++SRL+WR+    ++     + KK   LI+G+G GG LL +  + +  +  +E V
Sbjct  115  HLLLIGGSRLSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG-MEPV  170

Query  177  GFVDDDCNKWGTYLL-GKKVLGNTREINQLIQTFRINMVTIAIPSLPKKKIQQLVQSIEN  235
              VDDD NK    +  G KV G  ++I +L++ F I+ + IAIP+L++++++++ +  E 
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  236  KNIKVNMVPSFEEVATGKINVSQLKEVDVIDLLGREEVSLDLESISHQLEGQTILVTGAG  295
             N+ V  +P++E+V +G I+V++LK V+V DLLGR+ V LD+ SIS +L  +TILVTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  296  GSIGSEICRQVLAFEPAKLILLGHGENSIYSIHRELTTLDPQRKVEILPIIADIQDRERI  355
            GSIGSEICRQV  F P +++LLGHGENSIY IH+EL  L  +  +E++PIIAD+QD+ER+
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERM  349

Query  356  FYLMEKYHPTIVYHAAAHKHVPLMEYNPTEAIKNNINGTKNVAEAAKKNHVKNFVMISSD  415
              +M+ Y P +VYHAAAHKHVPLMEYNP EAIKNN+ GT+N AEAAK  +V +FVM+S+D
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  416  KANRPPNVMGATKRIAEMLITSL-NQSGETKFSAVRFGNVLGSRGSVIPLFKEQILRGGP  474
            KA  PPNVMGA+KR+AEM+I S+ N+++ T F AVRFGNVLGSRGSVIPLFK QI  GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  475  IIVTDFRMTRYFMTIPEASRLVIQSGALAKGGEIFVLDMDKPIKIVDLAKNMIHLSGYT-  533
            + VT+  MTRYFMTIPEASRLV+Q+GALA GGEIFVLDM+KP+KIVDLAKN+I+LSGY  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  534  EDIEIVETGIRPGeklyeelllekekkeTQIFEKIFVGDIKGFSLKEVTQLIEQLPEDES  593
            EDI I  +GIR+GEKL+EELL   E    Q++EKI+ G ++ +   E+ + I+++  +ES
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINES  589

129) MPD5_1391 in NC_016938


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  385 bits (1449),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 266/549 (49%), Positives = 403/549 (74%), Gaps = 11/549 (2%)

Query  57   VFNVFTRINRYTNTKEIRAIFLSMTAASICEFFllllldlnddY-RFVLLTYLVANFLII  115
            +F+++ R   Y++  E+  I  S+T++ +   +++ ++  +  + R+ ++T ++  +LI 
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  116  TSRLVWCTIIEAKSKSKVHGNQVYPKQTLIIGAGEAGQLLLNSLHTSAKNSGIKVIGLID  175
             SRL W        +    +++   K TLI+G+G +G LL+  +  ++   G+  + ++D
Sbjct  121  GSRLSWRIY-----RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLVVD  174

Query  176  DAPDKYH-TYLSGVRVLGNTKQIPNIIKDYDIEMLTLAIPSIHPEQLKRILDIITPLGLP  234
            D ++K   +  SGV+V G  K+IP+++K ++I  + +AIP++  ++L+ I  +     + 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  235  VNSMPDLEEVASGNITISRLKEIEVVDLLGREEVQLNIEQIKDQLSNKVILVTGAGGSIG  294
            V  MP++E+V SG+I +++LK +EV DLLGR+ V+L++  I  +L++K ILVTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  295  SEICRQVMKFNPETLILLGHGENSIYLIEKELHNTFQHASTEIIPIIADIQDKQQMVEIM  354
            SEICRQV KF P+ ++LLGHGENSIY I++EL   +++   E+IPIIAD+QDK++M  +M
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE-IEVIPIIADVQDKERMKKVM  353

Query  355  KRFHPQIVYHAAAHKHVPLMEYNPQSAIKNNIFGtkntaeaakaanvanFVMISTDKAVN  414
            + + P +VYHAAAHKHVPLMEYNPQ AIKNN++GT+NTAEAAK A+V++FVM+STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  415  PPNIMGATKRVAELIITNLNK-TGNTKFCAVRFGNVLGSRGSVIPLFKEQINKGGPITIT  473
            PPN+MGA+KRVAE++I ++N+ T++T F AVRFGNVLGSRGSVIPLFK QI+ GGP+T+T
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  474  DFRMTRYFMTIPEASRLVIQVGALARGGEIFILDMGDPVKIIDLAKNMIKLSGYKENEIK  533
            +  MTRYFMTIPEASRLV+Q GALA GGEIF+LDMG PVKI+DLAKN+I+LSGYKE++I 
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIG  533

Query  534  IIETGSRPGEKLYEELLVNKKKNHKQVFDKIFIEDIRGSFPDEVLPFVDNLSMASKSLAE  593
            I  +G R+GEKL+EELL +   +  QV++KI+   ++    +E+   +D++ + + S+ +
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF-LINESVRD  592

Query  594  DIIRFANAS  602
            +II F N +
Sbjct  593  EIIFFVNNN  601

130) Cthe_2334 in NC_009012


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  383 bits (1440),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 251/520 (49%), Positives = 386/520 (75%), Gaps = 14/520 (2%)

Query  62   VMKLYNSLWKYAGIYEVVMVI---AASFISNSIMISYVFLSQTPVPRSIFLICILTDIAL  118
            +  LY+  W YA++ E+++++   ++S+++ +I+++ +F  Q+P  R +++I  + ++ L
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVP-IFTQQAPFLR-LYFITWMMHLLL  118

Query  119  IGGVRFAYRVFRRIVKGEMIRFTNSKRVLiagagdagaiiVKEMKSHPKLKSTPVAFVDD  178
            IGG R++ R++R+     + +  + K  LI G+G +G++++++M + P +   PV  VDD
Sbjct  119  IGGSRLSWRIYRKTF---ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  179  DKYKIGKKI-SGVPVVGETKDVSEIIQKLQIDEVIIAMPSASHKKINDIYTGCAQTNCKV  237
            D  K    I SGV V G  KD++E+++K++I  +IIA+P+ S++++ +I   C  TN  V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  KILPSVSQLIDESVVMQKIRDVNIEDLLGREPVHLDIEEIGSYLKDRVVMVTGGGGSIGS  297
              +P++ +++   + ++K++ V++EDLLGR+PV+LD+  I+  L ++ ++VTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  298  ELCRQIANFLPKRLVILDNYENNAYDIQNEL--LYKHPDLKLDTVIANIREKQRMENIFK  355
            E+CRQ+ +F P R+++L++ EN+ Y+I++EL  LYK+ ++ +  +IA++++K+RM ++ +
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERMKKVMQ  354

Query  356  KYRPDVVFHAAAHKHVPLMEDNPTEAIKNNVFGTLNVAECADKYGTKRFVLISTDKAVNP  415
             Y+P VV+HAAAHKHVPLME NP EAIKNNV+GT N AE A      +FV++STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  TNIMGATKRIAEMIIQAMN-ENSKTEFVAVRFGNVLGSNGSVVPLFKKQIERGGPVTVTH  474
             N+MGA+KR+AEM+IQ+MN E SKT+FVAVRFGNVLGS GSV+PLFKKQIE GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  475  PEITRFFMTIPEAVQLVLQAGAMAKGGEIFVLDMGEPVKISELARNLIRLSGFEPDVDIK  534
            P +TR+FMTIPEA +LVLQAGA+A GGEIFVLDMG PVKI +LA+NLIRLSG+  + DI 
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIG  533

Query  535  IEYIGLRPGEKLYEELMLSEEGLLATKNDKIYVTKPVHID  574
            IE+ G+R+GEKL+EEL+  +E       +KIY  K   I+
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

131) Clo1313_2997 in NC_017304


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  383 bits (1441),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 251/520 (49%), Positives = 386/520 (75%), Gaps = 14/520 (2%)

Query  62   VMKLYNSLWKYAGIYEVVMVI---AASFISNSIMISYVFLSQTPVPRSIFLICILTDIAL  118
            +  LY+  W YA++ E+++++   ++S+++ +I+++ +F  Q+P  R +++I  + ++ L
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVP-IFTQQAPFLR-LYFITWMMHLLL  118

Query  119  IGGVRFAYRVFRRIVKGEMIRFTNSKRVLiagagdagaiiVKEMKSHPELKSTPVAFVDD  178
            IGG R++ R++R+     + +  + K  LI G+G +G++++++M + P +   PV  VDD
Sbjct  119  IGGSRLSWRIYRKTF---ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  179  DKYKIGKKI-SGVPVVGETKDVSEIIQKLQIDEVIIAMPSASHKKINDIYTGCAQTNCKV  237
            D  K    I SGV V G  KD++E+++K++I  +IIA+P+ S++++ +I   C  TN  V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  KILPSVSQLIDESVVMQKIRDVNIEDLLGREPVHLDIEEIGSYLKDRVVMVTGGGGSIGS  297
              +P++ +++   + ++K++ V++EDLLGR+PV+LD+  I+  L ++ ++VTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  298  ELCRQIANFLPKRLVILDNYENNAYDIQNEL--LYKHPDLKLDTVIANIREKQRMENIFK  355
            E+CRQ+ +F P R+++L++ EN+ Y+I++EL  LYK+ ++ +  +IA++++K+RM ++ +
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERMKKVMQ  354

Query  356  KYRPDVVFHAAAHKHVPLMEDNPTEAIKNNVFGTLNVAECADKYGTKRFVLISTDKAVNP  415
             Y+P VV+HAAAHKHVPLME NP EAIKNNV+GT N AE A      +FV++STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  TNIMGATKRIAEMIIQAMN-ENSKTEFVAVRFGNVLGSNGSVVPLFKKQIERGGPVTVTH  474
             N+MGA+KR+AEM+IQ+MN E SKT+FVAVRFGNVLGS GSV+PLFKKQIE GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  475  PEITRFFMTIPEAVQLVLQAGAMAKGGEIFVLDMGEPVKISELARNLIRLSGFEPDVDIK  534
            P +TR+FMTIPEA +LVLQAGA+A GGEIFVLDMG PVKI +LA+NLIRLSG+  + DI 
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIG  533

Query  535  IEYIGLRPGEKLYEELMLSEEGLLATKNDKIYVTKPVHID  574
            IE+ G+R+GEKL+EEL+  +E       +KIY  K   I+
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

132) MPTP_0527 in NC_015516


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  381 bits (1434),  Expect = 5e-107, Method: Compositional matrix adjust.
 Identities = 258/504 (52%), Positives = 378/504 (75%), Gaps = 10/504 (1%)

Query  22   RFVLLTYLVANFLIITSRLVWCTIIEAKSKSKVHGNQVYPKQTLIIGAGEAGQLLLNSLH  81
            R+ ++T ++  +LI  SRL W        +    +++   K TLI+G+G +G LL+  + 
Sbjct  106  RLYFITWMMHLLLIGGSRLSWRIY-----RKTFISKEGKKKPTLIVGGGRGGSLLIRQMM  160

Query  82   TSAKNSGIKVIGLIDDAPDKYH-TYLSGVRVLGNTKQIPNIIKDYDIEMLTLAIPSIHPE  140
             ++   G+  + ++DD ++K   +  SGV+V G  K+IP+++K ++I  + +AIP++  +
Sbjct  161  NTP-YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQ  219

Query  141  QLKRILDIITPLGLPVNSMPDLEEVASGNITISRLKEIDVIDLLGREEVQLNIEQIKDQL  200
            +L+ I  +     + V  MP++E+V SG+I +++LK ++V DLLGR+ V+L++  I  +L
Sbjct  220  RLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKEL  279

Query  201  SNKVILVTGAGGSIGSEICRQVMNFNPKTLILLGHGENSIYLIEKELHNTFQHTSTEIIP  260
            ++K ILVTGAGGSIGSEICRQV +F P  ++LLGHGENSIY I++EL   +++   E+IP
Sbjct  280  THKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIP  338

Query  261  IIADIQDKQQMVEIMKRFHPQIVYHAAAHKHVPLMEYNPQSAIKNNIFGtkntaeaakaa  320
            IIAD+QDK++M  +M+ + P +VYHAAAHKHVPLMEYNPQ AIKNN++GT+NTAEAAK A
Sbjct  339  IIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLA  398

Query  321  nvanFVMISTDKAVNPPNIMGATKRVAELIITNLNK-TGNTKFCAVRFGNVLGSRGSVIP  379
            +V++FVM+STDKAVNPPN+MGA+KRVAE++I ++N+ T++T F AVRFGNVLGSRGSVIP
Sbjct  399  EVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIP  458

Query  380  LFKEQINKGGPITITDFRMTRYFMTIPEASRLVIQAGALARGGEIFILDMGDPVKIIDLA  439
            LFK QI+ GGP+T+T+  MTRYFMTIPEASRLV+QAGALA GGEIF+LDMG PVKI+DLA
Sbjct  459  LFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLA  518

Query  440  KNMIKLSGYKENEIKIIETGSRPGEKLYEELLVNKKKNHKQVFDKIFIEDIRGSFPDEVL  499
            KN+I+LSGYKE++I I  +G R+GEKL+EELL +   +  QV++KI+   ++    +E+ 
Sbjct  519  KNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELY  578

Query  500  PFVDNLSMASKSLAEDIIRFANAS  523
              +D++ + + S+ ++II F N +
Sbjct  579  NKIDDF-LINESVRDEIIFFVNNN  601

133) K710_0836 in NC_021314


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  381 bits (1434),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 260/497 (53%), Positives = 373/497 (76%), Gaps = 11/497 (2%)

Query  91   RFIFLAYIFSSFLVSAPRITWRL-WHEFNLSkyekgkkekkRILVVGAGEGGSTFIQTVL  149
            R+ F++ +   +L++++R++WR+ +  F           KK  L+VG+G GGS +I+ ++
Sbjct  106  RLYFITWMMHLLLIGGSRLSWRIYRKTF-----ISKEGKKKPTLIVGGGRGGSLLIRQMM  160

Query  150  NKG-KDIEIVGIVDSDINKLG-TYLHGIKVMGNKYSIPRLVAEYEVNQVTIAIPSLDGKG  207
            N    ++E V +VD D NK   +   G+KV G    IP LV  ++++++ IAIP+L  + 
Sbjct  161  NTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR  220

Query  208  REAILDICRQANVPVNNMPSIENIVMGNVSLNTFEEIDIADLLSRNEVFLDQSALQPFFS  267
               I  +C  +NV V +MP+IEN++ G++ +N +  +++ DLL+R+ V LD +++   ++
Sbjct  221  LREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELT  280

Query  268  EKTVLVTGAGGSIGSEICRQVAHFKPKQILLLGHGENSIYLINRELNAKYSDNiiitpii  327
            +KT+LVTGAGGSIGSEICRQV  F P +I+LLGHGENSIY I++EL + Y ++I + PII
Sbjct  281  HKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPII  340

Query  328  adiQDRDLMFKIMADYKPDVVYHAAAHKHVPLMEYNPREAVKNNIFGTKNVAEAAKAAGI  387
            AD+QD++ M K+M  YKP VVYHAAAHKHVPLMEYNP+EA+KNN++GT+N AEAAK A +
Sbjct  341  ADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEV  400

Query  388  PKFVMVSTDKAVNPPNIMGATKRFAEMIVTGL-NEAGKTQFAAVRFGNVLGSRGSVVPLF  446
            +KFVMVSTDKAVNPPN+MGA+KR AEM++ ++ NE++KT+F AVRFGNVLGSRGSV+PLF
Sbjct  401  SKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLF  460

Query  447  KEQIKKGGPVTVTDFRMTRYFMTIPEASRLVIQAGFQASGGEIFVLDMGEPVKILDLAKK  506
            K QI  GGPVTVT+  MTRYFMTIPEASRLV+QAG  A+GGEIFVLDMG PVKI+DLAK+
Sbjct  461  KKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKN  520

Query  507  VIKLSGHTEDEIAIVESGIRPGEKLYEELLSTSERVSEQVHDKIFVGRVSSKPLDQVLSI  566
            +I+LSG  E++I+I  SGIR+GEKL+EELL+  E  +EQV +KI+ G+V     +++ + 
Sbjct  521  LIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNK  580

Query  567  VNGLDQLSDKELKETLI  583
            ++++  L +  +++ +I
Sbjct  581  IDDF--LINESVRDEII  595

134) EFD32_1900 in NC_018221


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  380 bits (1430),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 285/519 (55%), Positives = 402/519 (78%), Gaps = 10/519 (1%)

Query  57   YGSLFKVFTRINRYTNLREMIVIFGSLTASAGSSIIVLSFFNERYS-LRLVTFIYllsll  115
            ++ +F ++ R   Y+++ E+I+I  S+T+S  ++ I++++F ++ + LRL  +  ++ LL
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL  117

Query  116  liigsrlVWRIYVERKNRSYSSVESAKN-TIIVGAGEGGRILYNSFIGSKTAQSIRIVGF  174
            LI GSRL WRIY     +++ S E+ K+ T+IVG+G GG +L    + +    ++  V  
Sbjct  118  LIGGSRLSWRIY----RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLV  172

Query  175  VDDDPNKQNIYL-SGKKVLGMLKDLPELIQKYDVEMVTIAIPSLSREKLRELFELVESSH  233
            VDDD+NKQ++ + SG KV G +KD+PEL++K+++  + IAIP+LS+++LRE+  L E+++
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  VKVSTMPSMEELASGKTSVSKLKKIDVVDLLGRDEVELDIESIQDQITEKVILVTGAGGS  293
            V V  MP++E++ SG   V+KLKK++V DLLGRD VELD+ SI  ++T+K ILVTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSEICRQIIQFCPAKLLLLGHGENSIYLIDRELRINDKKKRTEIVPIIADIQDRKKIHE  353
            IGSEICRQ+ +F P +++LLGHGENSIY I++EL I   K   E++PIIAD+QD+ ++  
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKK  351

Query  354  IMAQHQPDIVYHAAAHKHVPLMECNPKEAVKNNIFGTknvaeaakvakvknfvMVSTDKA  413
            +M   +P +VYHAAAHKHVPLME NP+EA+KNN++GT+N AEAAK+A V +FVMVSTDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  414  NNPPNVMGSTKRIAEMIVTGLNEEGC-TKFSAVRFGNVLGSRGSVIPVFREQIAKGGPVT  472
             NPPNVMG++KR+AEM++ ++N+E   T F AVRFGNVLGSRGSVIP+F+ QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  ITDFRMSRYFMTIPEASRLVIQSGALAKGGEIFVLDMSEPVKIVDLAKNMIRLSGYSEDE  532
            +T+  M+RYFMTIPEASRLV+Q+GALA GGEIFVLDM+ PVKIVDLAKN+IRLSGY E++
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IEIVETGIRPGeklyeellldkeRNDEVVYEKIFVGNIK  571
            I I  +GIR+GEKL+EELL   E + E VYEKI+ G+++
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQ  570

135) cpsE in NC_015600


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  380 bits (1427),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 269/485 (56%), Positives = 370/485 (77%), Gaps = 9/485 (1%)

Query  91   PRLLWREINSHSKGTSKDGKKVRTLVVGAGKGGSIFVKTILNSD-SNIEIVGFVDDDSNK  149
            +RL WR    +    SK+GKK  TL+VG+G+GGS++++ ++N+    +E V  VDDDSNK
Sbjct  122  SRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  150  HG-SYLHGVKVLGDHKAIPNLVSDYAIEQVTIAIPSLLGKDREKIIET-CNQCGVRVNSM  207
            +  S   GVKV G  K IP+LV  + I ++ IAIP+L +++R + I+  C+   V V  M
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTL-SQQRLREINKLCEGTNVEVFKM  238

Query  208  PNIEDVIVGKVSTQNLREIDIADLLGREEIELNQTNLGEFFREKTVLVTGAGGSIGSEIC  267
            PNIE+V+ G +  ++L+ +++ DLLGR+ +EL+ ++++  + +KT+LVTGAGGSIGSEIC
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  268  RQVSNFKPKKLLLLGHGENSIYLIHRELLQKYGREieiipiiadiQDRDLIFNLLKDYRP  327
            RQV +F P +++LLGHGENSIY IH+EL+  Y  EIE+IPIIAD+QD++ + ++++ Y+P
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  328  NYVYHAAAHKHVPLMEYNPKEAVKNNIFGTKNVAEAALEAGVEKCVMISTDKAVNPTNVM  387
              VYHAAAHKHVPLMEYNP+EA+KNN++GT+N AEAA  A V K VM+STDKAVNP NVM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  388  GATKRVAETIVTGLNG-KGKTKFVAVRFGNVLGSRGSVVPVFKEQVAKGGPLTVTDFRMT  446
            GA+KRVAE ++ ++N   +KT FVAVRFGNVLGSRGSV+P+FK Q+  GGP+TVT+  MT
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  447  RYFMTIPEASRLVIQAGYQAKGGEVFVLDMGEPVKIVDLAKKIIKLSGHTEEEIGIVESG  506
            RYFMTIPEASRLV+QAG  A GGE+FVLDMG PVKIVDLAK++I+LSG  EE+IGI  SG
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSG  538

Query  507  IRPGEKLYEELLSSDERVSEQVHEKIFIGKVTPKPAEEVDSFISTLLSTDNKTLKNKLIE  566
            IR+GEKL+EELL+ DE  +EQV EKI+ GKV     EE+ + I  +L  +  ++++ +I 
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINE--SVRDEIIF  596

Query  567  FAKQE  571
            F +++
Sbjct  597  FVNNN  601

136) SSUD12_1366 in NC_017621


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  378 bits (1420),  Expect = 7e-106, Method: Compositional matrix adjust.
 Identities = 259/473 (55%), Positives = 360/473 (77%), Gaps = 6/473 (1%)

Query  111  RFILVSLFLSYVMLITPRIVWKVLHETRKNAIRKKDSPLRILVVGAGDGGNIFINTVEDR  170
            R+ +++  +  +++  +R+ W++    RK  I K +     L+VG+G GG+++I  + + 
Sbjct  106  RLYFITWMMHLLLIGGSRLSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT  162

Query  171  K-LNFEIVGIVDRDPNKLGTFIRTA-KVLGNRNDIPRLVEELAVDQVTIAIPSLNGKERE  228
              +  E V +VD D+NK    I ++ KV G  +DIP LV  + + ++ IAIP+L+ +   
Sbjct  163  PYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLR  222

Query  229  KIVEICNTTGVTVNNMPSIEDIMAGNMSVSAFQEIDVADLLGRPEVVLDQDELNQFFKGK  288
             I  +C+ T V V +MP+IE++M+G++ V+ ++ ++V DLLGR  V LD   +++ +  K
Sbjct  223  EINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHK  282

Query  289  TILVTGAGGSIGSELCRQIAKFTPKRLLLLGHGENSIYLIHRELLEKYQGKIELVPLIAD  348
            TILVTGAGGSIGSE+CRQ+ KFTP R++LLGHGENSIY IH+EL+  Y+  IE++P+IAD
Sbjct  283  TILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIAD  342

Query  349  IQDRELIFSIMAEYQPDVVYHAAAHKHVPLMEYNPHEAVKNNIFGTknvaeaaktakvak  408
            +QD+E +  +M  Y+P VVYHAAAHKHVPLMEYNP+EA+KNN++GT+N AEAAK A V+K
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  409  fvmvSTDKAVNPPNVMGATKRVAEMIVTGL-NEPGQTQFAAVRFGNVLGSRGSVVPLFKE  467
            FVMVSTDKAVNPPNVMGA+KRVAEM++ ++ NE ++T+F AVRFGNVLGSRGSV+PLFK 
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  468  QIKKGGPVTVTDFRMTRYFMTIPEASRLVIQAGHLAKGGEIFVLDMGEPVQILELARKVI  527
            QI  GGPVTVT+  MTRYFMTIPEASRLV+QAG LA GGEIFVLDMG PV+I++LA+++I
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  528  LLSGHTEEEIGIVESGIRPGEKLYEELLSTEERISEQIHEKIFVGRVTNKQSD  580
             LSG  EE+IGI  SGIR+GEKL+EELL+ +E  +EQ+ EKI+ G+V + + +
Sbjct  523  RLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

137) Gmet_1338 in NC_007517


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  377 bits (1419),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 240/501 (48%), Positives = 364/501 (73%), Gaps = 7/501 (1%)

Query  60   GMYRSIWKYASLQDGIEIFKVVTLSTLITSFVLFFLHDTSAMPRSIYVLDWVLLFAMVST  119
            ++Y+  W YAS+ + I I K VT S + T++++ ++ + ++  R +Y + W++ + +++ 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  120  SRLLWRVYRETYIIPRYHTGKRTLIVGAGEAGNLLLKEIRKQKNPANQVIGFLDDDPAKQ  179
            SRL WR+YR T+ I++    K TLIVG+G +G+LL++++ +    + + +  +DDD+ KQ
Sbjct  122  SRLSWRIYRKTF-ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  180  GMRLG-GIPVMGDLGRLRAAIRKHRIEEVIIAIATAQGALTRQVVSCCKETKVRFKTLPG  238
             M ++ G+ V G +  +   ++K  I  +IIAI+T      R++   C  T+V    +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  239  IKDIIDGTVSISQIKDVEIEDILGREPVKLDLETIRGYLTNKRVLVTGAAGSIGSEICRQ  298
            I +++ G + ++++K VE+ED+LGR+PV LD+ +I   LT+K +LVTGA+GSIGSEICRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  299  VAAFSPYKLLLFESAETPLYQIEKELTA-SHPDLRIIPVIGDVRDQARVEMVFDEFQPEV  357
            V  F+P +++L+  +E ++Y+I++EL +    ++ +IP+I+DV+D+ R+  V + ++P V
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  358  VFHAAAYKHVPMMEYNPVEAVTNNIGGTRTLANAAHRFGVKNFVMISTDKAVNPTNIMGA  417
            V+HAAA KHVP+MEYNP EA+ NN+ GTR  A+AA    V +FVM+STDKAVNP N+MGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  418  SKRVAEMYVQGLAR-KSRTNFTTVRFGNVLGSNGSVIPLFKEQIKAGGPVTVTDPKVIRY  476
            SKRVAEM +Q++    S+T+F +VRFGNVLGS GSVIPLFK QI AGGPVTVT+P + RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  477  FMTIPEACQLVLQAGCIGNGGEIFVLDMGEPVRILDLAEELIRLSGFVPHEEIDIVFTGL  536
            FMTIPEA +LVLQAG ++ GGEIFVLDMG PV+I+DLA +LIRLSG+  +E+I+I F+G+
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIGIEFSGI  539

Query  537  RPGEKLFEELLIDGEGIKPTR  557
            R+GEKLFEELL + + I P +
Sbjct  540  RSGEKLFEELL-NKDEIHPEQ  559

138) SSUST3_0740 in NC_015433


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  377 bits (1419),  Expect = 9e-106, Method: Compositional matrix adjust.
 Identities = 265/501 (53%), Positives = 381/501 (77%), Gaps = 8/501 (1%)

Query  111  RFILVSLFLSYVMLITPRIVWKVLHETRKNAIRKKDNPLRILVVGAGDGGNIFINTVEDR  170
            R+ +++  +  +++  +R+ W++    RK  I K ++    L+VG+G GG+++I  + + 
Sbjct  106  RLYFITWMMHLLLIGGSRLSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT  162

Query  171  K-LNFEIVGIVDRDPNKLGTFIRTA-KVLGNRNDIPRLVEKLAVDQVVIAIPSLNSKERE  228
              +  E V +VD D+NK    I ++ KV G  +DIP LV K+ + +++IAIP+L+ +   
Sbjct  163  PYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLR  222

Query  229  KIVEICNTTGVTVNNMPSIEDIMAGNMSVSAFQEIDVADLLGRLEVVLDQDELNQFFKGK  288
             I  +C+ T V V +MP+IE++M+G++ V+ ++ ++V DLLGR  V LD   +++ +  K
Sbjct  223  EINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHK  282

Query  289  TILVTGAGGSIGSELCRQIAKFTPKCLLLLGHGENSIYLIHRELLEKYQGKIELVPLIAD  348
            TILVTGAGGSIGSE+CRQ+ KFTP  ++LLGHGENSIY IH+EL+  Y+  IE++P+IAD
Sbjct  283  TILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIAD  342

Query  349  IQDRELIFSIMAEYQPDVVYHAAAHKHVPLMEYNPHEAVKNNIFGTknvaeaaktakvak  408
            +QD+E +  +M  Y+P VVYHAAAHKHVPLMEYNP+EA+KNN++GT+N AEAAK A V+K
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  409  fvmvSTDKAVNPPNVMGATKRVAEMIVTGL-NEPGQTQFAAVRFGNVLGSRGSVVPLFKE  467
            FVMVSTDKAVNPPNVMGA+KRVAEM++ ++ NE ++T+F AVRFGNVLGSRGSV+PLFK 
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  468  QIRKGGPVTVTDFRMTRYFMTIPEASRLVIQAGHLAKGGEIFVLDMGEPVQILELARKVI  527
            QI  GGPVTVT+  MTRYFMTIPEASRLV+QAG LA GGEIFVLDMG PV+I++LA+++I
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  528  LLSGHTEEEIGIVESGIRPGEKLYEELLSTEERISEQIYEKIFVGRVTNKQSDIVNSFIN  587
             LSG  EE+IGI  SGIR+GEKL+EELL+ +E  +EQ+YEKI+ G+V + + + + + I+
Sbjct  523  RLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

Query  588  GLLKKDRNELKDKLIEFAKQE  608
            ++L ++   ++D +I F +++
Sbjct  583  DFLINE--SVRDEIIFFVNNN  601

139) M7W_1029 in NC_020207


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  376 bits (1415),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 261/440 (60%), Positives = 351/440 (80%), Gaps = 5/440 (1%)

Query  135  YVSADSAKN-TLIVGAGEGGRILYNSFLGSKTAQDIHVVGFVDDDPNKRN-TYLSGKKVL  192
            ++S ++ K+ TLIVG+G GG +L    + +    +++ V  VDDD+NK++ +  SG KV 
Sbjct  133  FISKEGKKKPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLVVDDDSNKQKMSIASGVKVQ  191

Query  193  GALKDIPELIEKYDIQMLTIAIPSLSRKKLRRIFELVESARVKVNTMPSIEELASGKISV  252
            G +KDIPEL+ K++I+ + IAIP+LS+++LR I  L E++ V V  MP+IE++ SG I V
Sbjct  192  GCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEV  251

Query  253  SKLKTIDVVDLLGRDEVKLDIESIKDQITDKVILVTGAGGSIGSEICRQIIQFNPAKLLL  312
            +KLK ++V DLLGRD V LD+ SI  ++T+K ILVTGAGGSIGSEICRQ+ +F P +++L
Sbjct  252  NKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIML  311

Query  313  LGHGENSIYLIDRELRTHHQNCPTEIVPIIADIQDREKINEIMEQYHPDIVYHAAAHKHV  372
            LGHGENSIY I++EL    ++   E++PIIAD+QD+E+++ +M+ Y P +VYHAAAHKHV
Sbjct  312  LGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  373  PLMEYNPKEAVKNNIFGTknvaeaakaakvknFVMVSTDKANNPPNVMGSTKRIAEMIVT  432
            PLMEYNP+EA+KNN++GT+N AEAAK A V +FVMVSTDKA NPPNVMG++KR+AEM++ 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  433  GLNEEGC-TKFSAVRFGNVLGSRGSVIPVFREQIAQGGPITVTDFRMTRYFMTIPEASRL  491
            ++N+E   T F AVRFGNVLGSRGSVIP+F+ QI  GGP+TVT+  MTRYFMTIPEASRL
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  492  VIQSGALAKGGEIFILDMSEPVKIVDLAKNMIRLSGYSEDEIEIIETGIRPGeklyeell  551
            V+Q+GALA GGEIF+LDM+ PVKIVDLAKN+IRLSGY E++I I  +GIR+GEKL+EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  552  ldkeRNDEAVYEKIFVGNIK  571
               E + E VYEKI+ G+++
Sbjct  551  NKDEIHPEQVYEKIYRGKVQ  570

140) NT01CX_1779 in NC_008593


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  375 bits (1410),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 257/552 (47%), Positives = 390/552 (71%), Gaps = 22/552 (3%)

Query  54   NAIFHLYDRIWKYASIDELISIVYSVSLsniififysyfisyKLLSFVHYRFPATVHIIF  113
              IF+LY+R W YAS+ ELI IV SV+ S+I+       I  +  +F++  F      I 
Sbjct  59   AQIFDLYHRAWEYASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYF------IT  111

Query  114  WVLSVLALGGTRFIYRVVGGNDNAETF---DNKSSNILIVGAGDAGAMLIKEIKKHHSLN  170
            W++ +L +GG+R+  R+        TF   + K    LIVG+G +G++LI+++ +   + 
Sbjct  112  WMMHLLLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  171  YNIVGLIDDDLSKIG-QVINGIKILGTRDEIIKICNNYGVEEIFIALPSAPLKERKEIYN  229
             + V ++DDD +K    + +G+K+ G   +I  + +++ +  I+IA+P+ + +  +EI +
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  230  SCKETGCKLKTLPGIYEIINGNVNISQLRDVDINDLLGRDPVKLNNENINEYINDKVVLV  289
             C  T   +  +P I ++++G++++++L+ V+++DLLGRDPV L+  +I+  + +K +LV
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  290  TGGGGSIGSELCRQIVKFNPKKLIILDIYENNAYDLQMELK--YKYPNLDMEVVIASIRD  347
            TG+GGSIGSE+CRQ+ KF P ++++L+  EN+ Y+++ EL   YK  ++++  +IA ++D
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQD  345

Query  348  MTRLKEVFETYRPYVVFHAAAHKHVPLMEANPREAIKNNIFGTYNLAKCSDMYNVKRFVQ  407
              R+K V ++Y+PYVV+HAAAHKHVPLME NP+EAIKNN++GT N A  + + +V +FV 
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  408  ISTDKAVNPTNVMGATKRFCEKIIQAFDNE-SKTEYVAVRFGNVLGSNGSVIPLFKKQIK  466
            +STDKAVNP NVMGA+KR  E +IQ+ +NE SKT++VAVRFGNVLGS GSVIPLFKKQI 
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIE  465

Query  467  EGGPVTVTHPEINRFFMTIPEAAQLVIQAGAMAKGGEIFVLDMGEPVKIVDLAKDLITLS  526
             GGPVTVTHP + R+FMTIPEA++LV+QAGA+A GGEIFVLDMG PVKIVDLAK+LI LS
Sbjct  466  AGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLS  525

Query  527  GLKPDEDIKIEYTGLRPGEKLYEELLMDEVALTSTGHEKIFIEKPKEFNREYIEKSIEDF  586
            G K +EDI IE++G+R+GEKL+EELL  +        EKI+  K + +++E + + I+DF
Sbjct  526  GYK-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

Query  587  KGVVEGKREEII  598
              + E+ R+EII
Sbjct  585  L-INESVRDEII  595

141) A2cp1_4432 in NC_011891


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  375 bits (1408),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 251/528 (48%), Positives = 370/528 (71%), Gaps = 12/528 (2%)

Query  52   GLFRGLWRYTGARDLVGIIRWTSLSSVAYLAFLHIGF---QGFSRSVVAIEWLTAVIVIG  108
            +L++  W Y++  +L+ I++  + S VA   ++ I F     F R +  I W+  +++IG
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPI-FTQQAPFLR-LYFITWMMHLLLIG  120

Query  109  GTrflarflyarrfVVAEPGLSRMRVLVIGAGDAGEMLLREIQKRHGARYEPVGLVDDDR  168
            G+R+  R+       ++  G  +   L++G+G +G +L+R++ +      EPV +VDDD 
Sbjct  121  GSRLSWRIYRKT--FISKEG-KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  169  AKRGEQI-HGVRVVGTIEDIPHVARDLRVDEAIIAVPSASGAQMRRIVDLCKHAGVRFKT  227
             K+   I  GV+V G I DIP++ + + +   IIA+P+ S  ++R I  LC  + V    
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  228  MPGVDQLIDGRVAVSQLRDVDIEDLLGRDPVKLDMASISATIAGRVVMVSGAGGSIGSEI  287
            MP +++++ G + V++L+ V++EDLLGRDPV LDMASIS  ++ + ++V+GAGGSIGSEI
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  288  CRQVCRFGPSALVLVERAENNLFHIHRELLARF-PKLELVPCIGDVSDAQRMAAVFERRR  346
            CRQVC+F P  ++L+ ++EN+++HIH+EL++ +   +E++P I+DV D +RM  V +  +
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  347  PAIVFHAAAHKHVPMMEWNPGEAVKNNVFGTKTLADMADRYGVERFVMISTDKAVNPTSV  406
            P +V+HAAAHKHVP+ME NP EA+KNNV+GT+  A+ A    V +FVM+STDKAVNP +V
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  407  MGASKRVAEIYVQAL-SQRSKTRFVTVRFGNVLGSAGSVVPIFKEQIAAGGPVTVTHPEM  465
            MGASKRVAE+ +Q++ ++ SKT FV+VRFGNVLGS GSV+P+FK QI AGGPVTVTHP M
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  466  TRYFMTIPEASQLVLEAGAMGNGGEIFILDMGEPVKIADLARELITLSGLTPGEDIEIVF  525
            TRYFMTIPEAS+LVL+AGA++ GGEIF+LDMG PVKI DLA++LI LSG    EDI I F
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEF  536

Query  526  SGMRPGEKLFEELSVDSESADRTGHPKIFVGRFRPHAWEQVQRQLHDL  573
            SG+R+GEKLFEEL    E        KI+ G+ +    E++  +++D+
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

142) AnaeK_4411 in NC_011145


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  374 bits (1404),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 246/527 (47%), Positives = 367/527 (70%), Gaps = 10/527 (1%)

Query  70   GLFRGLWRYTGARDLVGIVQWTSLSSAAYLLFLH-FGIRG-FSRSVVAIEWLTAVIVIGG  127
            +L++  W Y++  +L+ IV+  + S  A  +++  F  ++ F R +  I W+  +++IGG
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  128  VrflarflyarrfVVAEPGLSRMRVLVIGAGDAGEMLLREIQKRHAARYEPVGLVDDDRA  187
                      R+  ++  G  +   L++G+G +G +L+R++ +      EPV +VDDD  
Sbjct  122  --SRLSWRIYRKTFISKEG-KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  188  KRGEQI-HGIRVVGTIDEIPSVARELRVDEAIIAVPSASGAQMRRIVDLCKQASVRFKTM  246
            K+   I  G++V G I +IP + + + +   IIA+P+ S  ++R I  LC  ++V    M
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM  238

Query  247  PGVDQLIDGRVAVSQLRDVDIEDLLGRDPVKLDMVSISATIAGRVVLVSGAGGSIGSEIC  306
            P +++++ G + V++L+ V++EDLLGRDPV LDM SIS  ++ + +LV+GAGGSIGSEIC
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  307  RQVCRFGPSALVLVERAENNLFHIHRELLARF-PKLELVPCIGDVSDAQRMAAVFERRRP  365
            RQVC+F P  ++L+ ++EN+++HIH+EL++ +   +E++P I+DV D +RM  V +  +P
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  366  AIVFHAAAHKHVPMMEWNPGEAVKNNVFGTKTLADMADRYGVERFVMISTDKAVNPTSVM  425
             +V+HAAAHKHVP+ME NP EA+KNNV+GT+  A+ A    V +FVM+STDKAVNP +VM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  426  GASKRVAEIYVQAL-SQRSKTRFVTVRFGNVLGSAGSVVPIFKEQIAAGGPVTVTHPEMT  484
            GASKRVAE+ +Q++ ++ SKT FV+VRFGNVLGS GSV+P+FK QI AGGPVTVTHP MT
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  485  RYFMTIPEASQLVLEAGTMGNGGEIFILDMGEPVKIADLARELITLSGLTPGEDIEIVFS  544
            RYFMTIPEAS+LVL+AG+++ GGEIF+LDMG PVKI DLA++LI LSG    EDI I FS
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFS  537

Query  545  GVRPGEKLFEELSVDSESADKTGHPKIFVGRFRPHAWEQIQRQLHDL  591
            G+R+GEKLFEEL    E        KI+ G+ +    E++  +++D+
Sbjct  538  GIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

143) Desor_5144 in NC_016584


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  374 bits (1406),  Expect = 9e-105, Method: Compositional matrix adjust.
 Identities = 256/516 (50%), Positives = 379/516 (74%), Gaps = 8/516 (1%)

Query  64   NRLWQYASISELLSIVYAVTVG-TSSVVLVIYFLAPVRYPHTVAVLLWLTTMFLIGGSRF  122
            +R W+YAS+SEL+ IV +VT +  ++ ++V  F     + + +  + W+  ++LIGGSR 
Sbjct  66   HRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGGSR-  123

Query  123  LGRILQDSVFNLHLSGIPKRiliigagdagalaVRELKNSNYREGYPVGIIDDAPEKQKL  182
            L++ +    F +   G  K  LI+G+G +G+L +R++ N+ Y    PV ++DD ++KQK+
Sbjct  124  LSWRIYRKTF-ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  183  KLM-GIPVLGTRKDIPrvvrsrrveevIIAMPSASGNVIRDMTEICEKSGLVIKIIPGIY  241
             +  G+ V G  KDIP +V+   +  +IIA+P+ S + +R++  +CE + + +  +P I 
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  242  NYFSGVVDSLKIREVQIEDLLGREQVNLDIEEVAGYLTGETVLITGAGGSIGSELCRQIC  301
            N  SG ++  K++ V++EDLLGR+ V+LD+  ++  LT  T+L+TGAGGSIGSE+CRQ+C
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  302  RFNPQRLILVGRGENSIFDIEQELRSEC-PGINLFTEILDVKERDKVELVFRRFKPGVVF  360
            +F P+R++L+G+GENSI++I+QEL +     I+++  I DV++++++  V + +KP VV+
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  361  HAAAHKHVPLMERNPEEALKNNILGTYNLAEISDAIKVNTFVLISTDKAINPTSIMGATK  420
            HAAAHKHVPLME NP+EA+KNN+LGT N AE +    V+ FV++STDKA+NP ++MGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  421  RVAEMIIQSFDRQ-SQTRFVAVRFGNVLGSRGSVIPTFKKQIAKGGPVTVTHPEMVRYFM  479
            RVAEM+IQS + + S+T FVAVRFGNVLGSRGSVIP FKKQI  GGPVTVTHP M RYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  480  TIPEASQLVIQAGAMAQGGEVFILDMGKPVKIVDLARDLIRLSGLEVDVDIKIEYTGIRP  539
            TIPEAS+LV+QAGA+A GGE+F+LDMGKPVKIVDLA++LIRLSG   + DI IE++GIR+
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRS  541

Query  540  GEKLYEELLTAEEGTTSTKHQRIFVAKPNGIDVAEI  575
            GEKL+EELL  +E       ++I+ +K + I+  E+
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

144) SSUD9_0745 in NC_017620


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  373 bits (1402),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 263/492 (54%), Positives = 375/492 (77%), Gaps = 8/492 (1%)

Query  111  RFILVSLFLSYVMLITPRIVWKVLHETRKNAIRKKDNPLRILVVGAGDGGNIFINTVEDR  170
            R+ +++  +  +++  +R+ W++    RK  I K ++    L+VG+G GG+++I  + + 
Sbjct  106  RLYFITWMMHLLLIGGSRLSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT  162

Query  171  K-LNFEIVGIVDRDPNKLGTFIRTA-KVLGNRNDIPRLVEKLAVDQVVIAIPSLNGKERE  228
              +  E V +VD D+NK    I ++ KV G  +DIP LV K+ + +++IAIP+L+ +   
Sbjct  163  PYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLR  222

Query  229  KIVEICNTTGVTVNNMPSIEDIMAGNMSVSAFQEIDVADLLGRLEVVLDQDELNQFFKGK  288
             I  +C+ T V V +MP+IE++M+G++ V+ ++ ++V DLLGR  V LD   +++ +  K
Sbjct  223  EINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHK  282

Query  289  TILVTGAGGSIGSELCRQIAKFTPKCLLLLGHGENSIYLIHRELLEKYQGKIELVPLIAD  348
            TILVTGAGGSIGSE+CRQ+ KFTP  ++LLGHGENSIY IH+EL+  Y+  IE++P+IAD
Sbjct  283  TILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIAD  342

Query  349  IQDRELIFSIMAEYQPDVVYHAAAHKHVPLMEYNPHEAVKNNIFGTknvaeaaktakvak  408
            +QD+E +  +M  Y+P VVYHAAAHKHVPLMEYNP+EA+KNN++GT+N AEAAK A V+K
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  409  fvmvSTDKAVNPPNVMGATKRVAEMIVTGL-NEPGQTQFAAVRFGNVLGSRGSVVPLFKE  467
            FVMVSTDKAVNPPNVMGA+KRVAEM++ ++ NE ++T+F AVRFGNVLGSRGSV+PLFK 
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  468  QIRKGGPVTVTDFRMTRYFMTIPEASRLVIQAGHLAKGGEIFVLDMGEPVQILELARKVI  527
            QI  GGPVTVT+  MTRYFMTIPEASRLV+QAG LA GGEIFVLDMG PV+I++LA+++I
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  528  LLSGHTEEEIGIVESGIRPGEKLYEELLSTEERVSEQIHEKIFVGRVTNKQSDIVNSFIN  587
             LSG  EE+IGI  SGIR+GEKL+EELL+ +E  +EQ+ EKI+ G+V + + + + + I+
Sbjct  523  RLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

Query  588  GLLQKD--RNEL  597
            ++L ++  R+E+
Sbjct  583  DFLINESVRDEI  594

145) capD in NC_015291


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  372 bits (1400),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 248/489 (51%), Positives = 362/489 (75%), Gaps = 9/489 (1%)

Query  132  PRITWQLIYSKRKQGSGDGEHRRTFLIGAGDGGALFMNSYQH-PTSDLELVGILDNDEKK  190
            +R++W+ IY ++   S +G  + T+++G+G GG+L++    + P  ++E V ++D+D +K
Sbjct  122  SRLSWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  191  KGQKLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMP  249
            +   ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  250  KVETVVQGLHQPGSGFQKIDITDLLGRQEIRLDESRLGTEITGKTILVTGAGGSIGSEIC  309
            ++E V+ G +   + ++K+++ DLLGR+ + LD + ++ E+T KTILVTGAGGSIGSEIC
Sbjct  240  NIENVMSG-EIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  310  RQVSRFNPERIVLLGHGENSIYLVYHELIRTF-QGIDYVPVIADIQDYDRLLQVFEQYKP  368
            RQV +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  369  AIVYHAAAHKHVPMMERNPKEAFKNNILGTYNVAKAVDEAKVPKMVMISTDKAVNPPNVM  428
             +VYHAAAHKHVP+ME NP+EA+KNN+LGT N A A   A V+K VM+STDKAVNPPNVM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  429  GATKRVAELIVTGFN-QRSKSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMT  487
            GA+KRVAE+++ + N + SK+ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MT
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  488  RYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVG  547
            RYFMTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   G
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSG  538

Query  548  IRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLEAIDQKIEEFRSLSGDELKEAIIS  607
            IR+GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II 
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIF  596

Query  608  FANETTHAE  616
            F N+   +E
Sbjct  597  FVNNNKTGE  605

146) Pjdr2_0353 in NC_012914


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  372 bits (1397),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 245/512 (48%), Positives = 372/512 (73%), Gaps = 8/512 (1%)

Query  65   WQYTGISDMLCLLQVALISAVVPFAAWWVMQGEAHPLLMLHHAA--GTFLLLTAPRLAWR  122
            W+Y+++S+++ L+  ++ S++V+ +    +  +  P+L L   +    +LL+ ++RL+WR
Sbjct  69   WEYASVSELI-LIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWR  127

Query  123  IFCDKYSVRKPaggrraliigagSCGTLIAKEMMQNDGVSVTPVGFIDDDPYKHRMDIL-  181
            I+   + + K +  + +LI+G+G  G+L+ ++MM+   +++ PV  +DDD+ K++M I  
Sbjct  128  IYRKTF-ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  182  GLQVLGNRKEIACVVESHHIDEIIIAMPSVSKTQISELVNLCKTTKAKLKIVPDLQDMID  241
            G++V G  K+I+ +V   +I  IIIA+P++S+ ++ E+ +LC  T+  +  +P++++++ 
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  242  NRGAAGRMRDVSVEDLLGRDPIRTDLEHIAGYVQEKVVLVTGAGGSIGSELCRQIAPFKP  301
                  +++ V VEDLLGRDP+  D+  I+  + +K +LVTGAGGSIGSE+CRQ+  F P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  302  SKLLLLGHGENSIYTIEMEMRSAF-PQLAIETVIADVQDRTRIDAVFAKFKPQVVFHAAA  360
             +++LLGHGENSIY I+ E+ + +  ++ +  +IADVQD+ R+  V   +KP VV+HAAA
Sbjct  307  DRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  361  HKHVPLMERNPAEAIKNNVFGTKNVAECADAYGAERFVLISTDKAVNPTSVMGTTKRIAE  420
            HKHVPLME NP EAIKNNV+GT+N AE A      +FV++STDKAVNP +VMG++KR+AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  421  MFIQSLDMH-SNTKFVAVRFGNVLGSRGSVIPRFKDQIVKGGPVTVTHPEMVRYFMTIPE  479
            M IQS++ + S+T FVAVRFGNVLGSRGSVIP FK QI  GGPVTVTHP M RYFMTIPE
Sbjct  427  MVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  480  AVQLVIQAGSFAKGGEVFILDMGKPVKIYDLAVDLIRLSGYEPHVDIDITFSGMREGEKL  539
            A +LV+QAG++A GGE+F+LDMGKPVKI DLA +LIRLSGY  + DI+I FSG+R GEKL
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKL  545

Query  540  YEELLTNEEGLSSTKHNRIFIGRPVQLNRKEL  571
            +EELL ++E  +    ++I+ G+  ++++ EL
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

147) Desku_1733 in NC_015573


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  371 bits (1393),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 265/530 (50%), Positives = 381/530 (72%), Gaps = 13/530 (2%)

Query  61   FGLYARMWQYASVSDLLSIVGAVTAGVFVNISLAYFYMEGGKFPLPRTVFIIAWLLNVVL  120
            F+LY R W+YASVS+L+ IV +VT+++     +  ++ + + F     +++I+W+++++L
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL---RLYFITWMMHLLL  118

Query  121  IGGFRFSWRLFLNRGIHFGRLRAGRPVLIvgageagaavaRELNNQNNHHHVPVGFVDDD  180
            IGG R+SWR++  R   +++    +P LIVG+G +G+ + R++ N       PV  VDDD
Sbjct  119  IGGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  181  PAKQKMQL-FGLPVLGTREDIPRLVDRYAIEEIIIAMPSVPGRVIREIVEICRPTGAKLR  239
            + KQKM +  G+ V G   DIP LV ++ I  IIIA+P+++ + +REI  +C  T   + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  240  ILPGIYELIDGKVTVSQIRNVEVEDLLGREPVKVNLEEIAGYLEDRTVLVTGAGGSIGSE  299
             +P I +++ G + V+++++VEVEDLLGR+PV +++  I+  L ++T+LVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  300  LCRQIAQFNPRKLILLGHGENSIFEIHRELSQGY-PELELAPAIVDVRDAASINRLFGVH  358
            +CRQ+ +F P +++LLGHGENSI++IH+EL   Y  E+E+ P I DV+D   ++++    
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  359  RPhvvfhaaahkhvPLMEENAFEALKNNVWGTFNVARAAHDCNVRTFVLISTDKAVNPVS  418
            +P VV+HAAAHKHVPLME N+ EA+KNNV GT N A AA   +V  FV++STDKAVNP +
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  419  IMGATKRVAEMVVQEMAL-KSKTCFAAVRFGNVLGSRGSVVPIFKKQIASGGPVTVTHPE  477
            +MGA+KRVAEMV+Q M    SKT F AVRFGNVLGSRGSV+P+FKKQI +GGPVTVTHP 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  478  MTRYFMTIPEAVQLIIQAGAMARGGEIFVLDMGEPVKIVELAETMIRLSGFEPGEDIEIV  537
            MTRYFMTIPEA +L++QAGA+A GGEIFVLDMG PVKIV+LA  +IRLSG+   EDI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIE  535

Query  538  FTGVRPGEKLSEELLTSAEKVNSTRHERIFIARPEPVDS----AKLNHFL  583
            F+G+R+GEKL EELL   E       E+I+ ++ + ++      K+++FL
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

148) Amet_0277 in NC_009633


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  371 bits (1393),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 246/514 (48%), Positives = 369/514 (72%), Gaps = 13/514 (2%)

Query  64   FGMYQNLWKYASIEAVFQIM--IAAFVANTGVVSYMVLTQQGHLPRSIYLLMFILDMLLV  121
            F++Y+  W YAS+  ++ I+  +++ +  TG++   ++TQQ+ + R +Y++  ++++LL+
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLR-LYFITWMMHLLLI  119

Query  122  GGIRFSYRATRGLREHGFIRRKNCKR-VMIVGAGTAGAVVIKELKIHDNLNYKPVAVIDD  180
            GG R+S R  R      FI +   K+  +IVG+G +G+++I+++     +   PV V+DD
Sbjct  120  GGSRLSWRIYR----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  181  DESKLGSKI-NGVPVLGDRYHIKKVAEMKQVDEIIIAIPSGFRQELKEIVEECSKTKCKL  239
            D +K    I +GV V G   +I  +    ++  IIIAIP+  +Q L+EI   C  T+  +
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  240  KILPGIGELIDGKVSMKKARDVEIEDLLGRDAINIDLEEISEYLHNQVVLITGGGGSIGS  299
              +P I +++ G + ++K + VE+EDLLGRD++++D+  IS  L ++ +L+TG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  300  ELCRQIATFNPKKLLILDNYENNAYDIQNELRRKY-PELNLEVLIASVRERDRIEEIFGQ  358
            E+CRQ+  F P ++++L++ EN+ Y+I++EL   Y  E+++  +IA V++++R+  +   
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  359  YLPEVIFHAAAHKHVPLMEANPQEAIKNNIFGTKNVAECADQFGAKRFVLISTDKAVNPT  418
            Y P V++HAAAHKHVPLME NPQEAIKNN++GT+N AE A      +FV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  419  NIMGATKRVAEMLIQSIDL-TSKTEFVAVRFGNVLGSNGSVIPLFKRQIAEGGPVTVTHP  477
            N+MGA+KRVAEM+IQS++  TSKT+FVAVRFGNVLGS GSVIPLFK+QI  GGPVTVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  478  EVTRYFMTIPEAVQLVIQAGSMASGGEIFVLDMGEPVKIIDLARNLIRLSGMEPDVDMDI  537
             +TRYFMTIPEA +LV+QAG++A+GGEIFVLDMG PVKI+DLA+NLIRLSG   + D++I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  538  KVVGLRPGEKLYEELLMDEEGLESTKHDKIFVGK  571
               G+R+GEKL+EELL  +E       +KI+ GK
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

149) GM21_2582 in NC_012918


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  371 bits (1395),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 243/502 (49%), Positives = 366/502 (73%), Gaps = 20/502 (3%)

Query  60   GMYRCIWRYASLQDAYEIFKAVTLSSVVSAFTF-LFMK-GPFALPRSIYFLDWFLLFSMV  117
            ++Y+  W YAS+ +   I K+VT S V +++   +F + +PF     +YF+ W + + ++
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL---RLYFITWMMHLLLI  119

Query  118  ACSRLLWRVYRETKFLPSLHKGKKTLIIGAGEAGNLLLKEIRKEADSPY---NVIGFVDD  174
            + SRL WR+YR T F++   K K TLI+G+G +G+LL++++    ++PY   + +  VDD
Sbjct  120  GGSRLSWRIYRKT-FISKEGKKKPTLIVGGGRGGSLLIRQMM---NTPYMGMEPVLVVDD  175

Query  175  DIEKRGMRL-SGVRVLGGTSRLCALVRKHAIEEVIFAIPSGDRELMRRVIANCERGKARF  233
            D +K+ M + SGV+V G    +  LV+K  I  +I+AIP+  ++ +R +   CE  +   
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  234  KTLPGITAIVDGKVSMSQIKDVEIEDLLGRDPVLLDQTAIRNYLTDKRVLVTGAAGSIGS  293
              +P I  ++ G + ++++K VE+EDLLGRDPV LD ++I + LT+K +LVTGA+GSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  294  EICRQVARFKPAKLVLFDHAETPLFYIEKELAASF-PDLRLIPMVGDVKNQERVEAVFDE  352
            EICRQV +F P +++L++H+E +++ I++EL + +  ++ +IP+++DV+++ER+  V + 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  353  FCPEVVFHAAAYKHVAMMEYNPAEAVLNNVLGSRIVADAAHKTKVRNFVMVSTDKAVNPT  412
            + P VV+HAAA KHV++MEYNP EA+ NNVLG+R  A+AA  + V +FVMVSTDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  413  NVMGATKRSAEIYVQALAA-KSQTKFTTVRFGNVLGSNGSVIPLFKEQIKNGGPVTVTHS  471
            NVMGA+KR AE+ +Q++    S+T F +VRFGNVLGS GSVIPLFK QI  GGPVTVTH+
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  472  DVVRYFMTIPEASQLVMQAGCIGRGGEIFVLDMGDPVRILSLAEELIRLSGLVPYKE--M  529
            ++ RYFMTIPEAS+LV+QAG ++ GGEIFVLDMG PV+I+ LA +LIRLSG   YKE  +
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG---YKEEDI  532

Query  530  DIQFTGLKPGEKLFEELLINGE  551
            +I+F+G+++GEKLFEELL ++E
Sbjct  533  GIEFSGIRSGEKLFEELLNKDE  554

150) Swol_0128 in NC_008346


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  371 bits (1395),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 259/547 (48%), Positives = 395/547 (73%), Gaps = 22/547 (4%)

Query  64   LYHRMWKYASIGELFGIVKAVTTS--TAIVIILIYTIPLSYLPRSVYIMSWVFMIIFIGs  121
            LYHR W YAS++EL+ IVK+VT+S  ++ +I+ I+T   ++L   +Y+++W+  +++IG+
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLIGG  121

Query  122  srls-wrllrDLIIKESNKKAKRTLIIGAGDAGAMVARELNNNQSLNLLPVGFVDDSPLK  180
            SRLS +   + +I KE++KK+  TLI+G+G +G+++ R++ N   + + PV  VDD + K
Sbjct  122  SRLSWRIYRKTFISKEGKKKP--TLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  181  QKLSI-FGIPVLGSREQIPFLTASHGIEEIIIAMPSAEGRTIREIVNICQATGVRLRIFE  239
            QK+SI  G+ V G   +IP L     I  IIIA+P+   + +REI ++C++T V +    
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  240  GTDDLLHSR---SKIRDVQLEDLLRREPVKLDLEEIAAYLQGKTVLISGAGGSIGSELCR  296
              ++++ +    +K++ V++EDLL R+PV LD+  I+  L  KT+L++GAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  297  QVCRHRPQRLILLECSENNLFDIDNELRESFPEQ-ALEAELADVRNREKLQAVFEKYFPQ  355
            QVC+  P+R++LL  +EN++++I++EL   + E+  + + +ADV+++E+++ V + Y P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  356  VIFHAAAFKHVPMMEMHPEEALNNNVLGTRNIAEMADKYGSETFILISTDKAVNPTNVMG  415
            V++HAAA KHVP+ME +P+EA++NNVLGTRN AE A       F+++STDKAVNP NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  416  ASKRIAELIVKDINR-SSQTRFAAVRFGNVLGSRGSVVPIFLKQIQKGGPLTVTHPDMTR  474
            ASKR+AE++++ +N  +S+T F AVRFGNVLGSRGSV+P+F KQI+ GGP+TVTHP+MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  475  YFMTIPEAVELVIQAGAIARGGEIFVLDMGEPVKIADLANDLIRLSGYDPELDIEIKYTG  534
            YFMTIPEA  LV+QAGA+A GGEIFVLDMG PVKI DLA++LIRLSGY  E DI I ++G
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSG  538

Query  535  IRPGEKLYEELFSGYEEMAATRHQRIF---ISTKELDERYNGIKNNITAWINNLSPERNE  591
            IR+GEKL+EEL++  E  +    ++I+   +   E +E YN I + +        + R+E
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN-----ESVRDE  593

Query  592  IIRFIQE  598
            II F+++
Sbjct  594  IIFFVNN  600

151) capD in NC_019954


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  370 bits (1389),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 264/544 (49%), Positives = 388/544 (72%), Gaps = 16/544 (2%)

Query  67   VFNLYNRIWKYASISELISIV--VATSFSTLTFLGYTFMVRKTFPRSIYILFWLLLTTFV  124
            +F+LY+R W YAS+SELI IV  V++S+ +  ++   F  +  F R +Y++ W++   ++
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLI  119

Query  125  GGSRFILRTFNGVTPTFRKTEGVRN-AMVIGAGEAGSMVIQEFKKHPDLRMKPVAIIDDD  183
            GGSR+  R +     TF   EG ++ ++++G+G +GS++I++  + P + M PV ++DDD
Sbjct  120  GGSRLSWRIYR---KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  184  TNKHGMSI-HGVKVLGARQVIPETVLRKNIKEIIIAMPSIDRHQIRDIVDICSKTKCKLR  242
            +NK+ MSI  GVKV G  + IPE V + NIK IIIA+P++ ++++R+I  +C  T+  + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  243  IVPGVYELLDGKVSIKRLRDVRIEDLLGREPVKLNLDEISGYIENKVVLVTGGGGSIGSE  302
             +P + +++ G + +++L+ V +EDLLGR+PV L++  IS  + +K +LVTG+GGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  303  LCRQIARFKPKELLIFDISENNVYSLEYDLKTLF-PDLCYTPLIGSVRDKGRLEYVFKKY  361
            +CRQ+ +F P  +++++ +EN++Y ++ +L  L+  ++   P+I+ V+DK R+  V + Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  362  GPDVVFHAAAHKHVPMMELNATEAIKNNVFGTLNVAEAADKYGAERFTLISTDKAVNPTN  421
             P VV+HAAAHKHVP+ME N+ EAIKNNV+GT N AEAA      +F ++STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  422  IMGASKRIAEIVVQMMSMKSS-TVFSAVRFGNVLGSEGSVIPLFRKQIENGGPVTVTHPE  480
            +MGASKR+AE+V+Q M+  +S T F AVRFGNVLGS GSVIPLF+KQIE GGPVTVTHP 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  481  VIRYFMTIPEAVQLVIQAGALAKGGEIFILDMGEPVKIADLARDMIKLSGLEPGVDIDIE  540
            + RYFMTIPEA +LV+QAGALA GGEIF+LDMG PVKI DLA+++I+LSG     DI+IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIE  535

Query  541  YIGLRPGeklfeelllneeGITATKYKKIYIAKPTFSNVDAFEKEILNLRELLFDANAEI  600
            + G+R+GEKLFEELL ++E      Y KIY +K     V+ +EKE L  +   F  N  +
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK-----VQKIEKEELYNKIDDFLINESV  590

Query  601  RDVI  604
            RD I
Sbjct  591  RDEI  594

152) TepRe1_1757 in NC_015519


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  370 bits (1389),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 264/544 (49%), Positives = 388/544 (72%), Gaps = 16/544 (2%)

Query  67   VFNLYNRIWKYASISELISIV--VATSFSTLTFLGYTFMVRKTFPRSIYILFWLLLTTFV  124
            +F+LY+R W YAS+SELI IV  V++S+ +  ++   F  +  F R +Y++ W++   ++
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLI  119

Query  125  GGSRFILRTFNGVTPTFRKTEGVRN-AMVIGAGEAGSMVIQEFKKHPDLRMKPVAIIDDD  183
            GGSR+  R +     TF   EG ++ ++++G+G +GS++I++  + P + M PV ++DDD
Sbjct  120  GGSRLSWRIYR---KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  184  TNKHGMSI-HGVKVLGARQVIPETVLRKNIKEIIIAMPSIDRHQIRDIVDICSKTKCKLR  242
            +NK+ MSI  GVKV G  + IPE V + NIK IIIA+P++ ++++R+I  +C  T+  + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  243  IVPGVYELLDGKVSIKRLRDVRIEDLLGREPVKLNLDEISGYIENKVVLVTGGGGSIGSE  302
             +P + +++ G + +++L+ V +EDLLGR+PV L++  IS  + +K +LVTG+GGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  303  LCRQIARFKPKELLIFDISENNVYSLEYDLKTLF-PDLCYTPLIGSVRDKGRLEYVFKKY  361
            +CRQ+ +F P  +++++ +EN++Y ++ +L  L+  ++   P+I+ V+DK R+  V + Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  362  GPDVVFHAAAHKHVPMMELNATEAIKNNVFGTLNVAEAADKYGAERFTLISTDKAVNPTN  421
             P VV+HAAAHKHVP+ME N+ EAIKNNV+GT N AEAA      +F ++STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  422  IMGASKRIAEIVVQMMSMKSS-TVFSAVRFGNVLGSEGSVIPLFRKQIENGGPVTVTHPE  480
            +MGASKR+AE+V+Q M+  +S T F AVRFGNVLGS GSVIPLF+KQIE GGPVTVTHP 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  481  VIRYFMTIPEAVQLVIQAGALAKGGEIFILDMGEPVKIADLARDMIKLSGLEPGVDIDIE  540
            + RYFMTIPEA +LV+QAGALA GGEIF+LDMG PVKI DLA+++I+LSG     DI+IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIE  535

Query  541  YIGLRPGeklfeelllneeGITATKYKKIYIAKPTFSNVDAFEKEILNLRELLFDANAEI  600
            + G+R+GEKLFEELL ++E      Y KIY +K     V+ +EKE L  +   F  N  +
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK-----VQKIEKEELYNKIDDFLINESV  590

Query  601  RDVI  604
            RD I
Sbjct  591  RDEI  594

153) Gbem_1633 in NC_011146


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  369 bits (1387),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 242/500 (49%), Positives = 367/500 (74%), Gaps = 16/500 (3%)

Query  60   GMYRCIWRYASLRDAYEIFKvvtlssvvsalalllIKGPFALPRSIYFLDWFLLFSLVAG  119
            ++Y+  W YAS+ +   I K VT S V +++ + ++    ++ R +YF+ W + + L++G
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  120  SRLVWRVYRETRFFPSLHKGKKTLIIGAGEAGNLLLKEIRKEADSPY---NVIGFVDDDI  176
            SRL WR+YR T F++   K K TLI+G+G +G+LL++++    ++PY   + +  VDDD 
Sbjct  122  SRLSWRIYRKT-FISKEGKKKPTLIVGGGRGGSLLIRQMM---NTPYMGMEPVLVVDDDS  177

Query  177  EKRGMRL-SGVRVLGGTNRLCAMVRKHAIEEVIFAIPSGDGELMRRVIANCKRSKARFKT  235
            +K+ M + SGV+V G  + +  +V+K  I  +I+AIP+   + +R +   C  ++     
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  236  LPGITAIVDGKVSMSQIKDVEIEDLLGRDPVMLDQTAIRNYLTDKRVLVTGAAGSIGSEI  295
            +P I  ++ G + ++++K VE+EDLLGRDPV LD ++I + LT+K +LVTGA+GSIGSEI
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  296  CRQVARFKPAKLVLFDHAETPLFYIEKELAAAF-PDLRIIPMVGDVKNQERVEAVFDEFI  354
            CRQV +F P +++L++H+E +++ I++EL + +  ++ +IP+++DV+++ER+  V + + 
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  355  PEVVFHAAAYKHVAMMEYNPAEAVLNNVLGSRIVADAAHKTKVSNFVMVSTDKAVNPTNV  414
            P VV+HAAA KHV++MEYNP EA+ NNVLG+R  A+AA  + VS+FVMVSTDKAVNP NV
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  415  MGATKRSAEIYVQALAA-KSQTKFTTVRFGNVLGSNGSVIPLFKEQIRKGGPVTVTHSDV  473
            MGA+KR AE+ +Q++    S+T F +VRFGNVLGS GSVIPLFK QI  GGPVTVTH+++
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  474  VRYFMTIPEASQLVMQAGCIGRGGEIFVLDMGEPVRILSLAEELIRLSGLIPYKE--MDI  531
             RYFMTIPEAS+LV+QAG ++ GGEIFVLDMG PV+I+ LA +LIRLSG   YKE  ++I
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG---YKEEDIGI  534

Query  532  QFTGLKPGEKLFEELLINGE  551
            +F+G+++GEKLFEELL ++E
Sbjct  535  EFSGIRSGEKLFEELLNKDE  554

154) GM18_1462 in NC_014973


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  369 bits (1386),  Expect = 4e-103, Method: Compositional matrix adjust.
 Identities = 241/501 (49%), Positives = 366/501 (74%), Gaps = 11/501 (2%)

Query  60   GMYLSIWRYASLQDAYEIFKVVTLSSLISALVL-IFMN-GPFGLPRSIYFLDWFLLFSLV  117
            ++Y   W YAS+ +   I K VT S + +++++ IF + +PF     +YF+ W + + L+
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPF---LRLYFITWMMHLLLI  119

Query  118  ASSRLVWRIYRETKVMPSLRKGKKTLIIGAGEAGNLLLKEIRKQAGSTYNVVGFVDDDPE  177
            ++SRL WRIYR T +    +K K TLI+G+G +G+LL++++ + +    + V  VDDD++
Sbjct  120  GGSRLSWRIYRKTFISKEGKK-KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  178  KTGMRLA-GVRVLGRTDRLCALVRKYNIEEVIFAIPSGGQDLMRQVIANCERAKARFKTL  236
            K  M +A GV+V G    +  LV+K+NI  +I+AIP+ +Q+ +R++   CE ++     +
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM  238

Query  237  PGITAIIDGKVSMSQIKDVEIEDLLGRDPVVLDQTAIRNYLTDKRVLVTGAAGSIGSEIC  296
            P I  ++ G + ++++K VE+EDLLGRDPV LD ++I + LT+K +LVTGA+GSIGSEIC
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  297  RQVARFNPAKLVLFDHAETPLFYIEKELAAAF-PELRIIPTVGDVKNQDRVEAVFDEFCP  355
            RQV +F P +++L++H+E +++ I++EL + +  E+ +IP ++DV++++R+  V + + P
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  356  DVVFHAAAYKHVAMMEYNPAEAVLNNVMGSKVVADAAHKTKVRNFVMVSTDKAVNPTNVM  415
             VV+HAAA KHV++MEYNP EA+ NNV+G++  A+AA  + V +FVMVSTDKAVNP NVM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  416  GATKRSAEIYVQALAA-KSQTKFTTVRFGNVLGSNGSVIPLFKEQIRRGGPVTVTDKDVV  474
            GA+KR AE+ +Q++    S+T F +VRFGNVLGS GSVIPLFK QI  GGPVTVT+ ++ 
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  475  RYFMTISEASQLVMQAGCIGHGGEIFVLDMGEPVRILSLAEELIRLSGFIPYKEIDIEFV  534
            RYFMTI+EAS+LV+QAG ++ GGEIFVLDMG PV+I+ LA +LIRLSG+    +I+IEF 
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIEFS  537

Query  535  GLKPGEKLFEELLIDGEGIKP  555
            G+++GEKLFEELL + + I P
Sbjct  538  GIRSGEKLFEELL-NKDEIHP  557

155) Clocl_1008 in NC_016627


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  368 bits (1383),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 242/516 (47%), Positives = 361/516 (70%), Gaps = 6/516 (1%)

Query  58   IFGIYSMLWNYASVEELIRIFLATITSSITQIFLAAYFNVLFP-PSVYIIAWMITFFFVG  116
            IF++Y   W+YASV ELI I  +  +S ++  ++ + F    P   +Y+I+WM+ ++++G
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  117  GVKFLRRIVRSLrikkrkgihrkrVMIVGAGEAASLLIKEMKNNKHSIYEPVVAIDDDHK  176
            G ++ +RI R       K   +K  +IVG+G ++SLLI++M N      EPV+ +DDD +
Sbjct  121  GSRLSWRIYRK--TFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  177  KHNTQI-NGVPIAGGREKIVKTAMDMAVEEIVLAIPSITRKETFELINICQKTGCKLKVL  235
            K++  I +GV + G    I        +  I++AIP+++++   E+ ++C+ T   +  +
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM  238

Query  236  PSVYSLVNGEVSIKKIRDVTIEDLLQRDEISLSVEEISGYLKGETILVTGGGGSIGSELC  295
            P++ ++++GE+ ++K++ V +EDLL RD + L +  IS  L   TILVTG+GGSIGSE+C
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  296  RQIAAYEPESLLIFDIYENNAYELQNELEQKYKGSLDIKVIIGSIRDKKRLDYVFSRHRP  355
            RQ+  + P+ +++++  EN+ Y++++EL   YK  +++  II+ ++DK R+  V    +P
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  356  GIVFHAAAHKHVPLMEFNPQEAVKNNVYGTLNLAECAHQYNCKKFVLISTDKAVNPTSIM  415
             +V+HAAAHKHVPLME+NPQEA+KNNV GT N AE A   +  KFV++STDKAVNP ++M
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  416  GATKRIAELIIQYMNS-ISKTKFSAVRFGNVLGSNGSVIPLFKKQIENGGPITITHPDVT  474
            GA+KR+AE++IQ MN+  SKT F AVRFGNVLGS GSVIPLFKKQIE GGP+T+THP++T
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  475  RYFMTIPEAVSLVIQSGAMMEGGEIFVLDMGKPVKIIDLAKTLISLSGLTPYVDIDFEYI  534
            RYFMTIPEA  LV+Q+GA+  GGEIFVLDMGKPVKI+DLAK LI LSG     DI++E+ 
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIEFS  537

Query  535  GLRPGEKLYEELLMSEEEVRITKHDKIFIEKVRDID  570
            G+R+GEKL+EELL  +E       +KI+  KV+ I+
Sbjct  538  GIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

156) Cthe_2650 in NC_009012


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  368 bits (1383),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 247/545 (46%), Positives = 375/545 (69%), Gaps = 7/545 (1%)

Query  57   NIFGIYSMLWNYASVEELLKIFWATMTSVIVQLLLAAYFNVMFP-VSVYITCWMITFYFI  115
            +IF++Y   W+YASV EL+ I  +  +S++   ++ + F    P + +Y+  WM+ + +I
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  116  GGTRFIVRITRSIkakkrknthkkRIMIIGAGDTASLLIKETKNNKRSIYEPVVAIDDDP  175
            GG+R+  RI R     K  +      +I+G+G  +SLLI++  N      EPV+ +DDD+
Sbjct  120  GGSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  176  KKHNTQI-NGVPIIGGRDKIIEAAKDMSIEEIVLAMPSVSKKETLEIIDLCQKTGCKLKV  234
            +K++  I +GV + G    I E  K  +I  I++A+P++S++   EI  LC+ T   +  
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  235  LPSVYGIVNGEVSIKEIRDVTVEDLLPRDEISLSIEEISGYLKGETILVTGGGGSIGSEL  294
            +P++  +++GE+ ++ ++ V VEDLL RD + L +  IS  L   TILVTG+GGSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  295  CRQIASYEPKTLLVFDIYENNAYELQNELVQKYKGNLDIKVIIGSIRDKKRLDYVFSQYK  354
            CRQ+  + P  +++++  EN+ Y++++EL+  YK ++++  II+ ++DK R+  V   YK
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  355  PGIVFHAAAHKHVPLMEFNPQEAVKNNVFGTLNVAECAHQYNCKKFVLISTDKAVNPTSI  414
            P +V+HAAAHKHVPLME+NPQEA+KNNV+GT N AE A   +  KFV++STDKAVNP ++
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  415  MGATKRIAELIIQYMNS-ISKTKFCAVRFGNVLDSNGSVIPLFKKQIEQGGPITITHPEV  473
            MGA+KR+AE++IQ MN+  SKT F AVRFGNVL+S GSVIPLFKKQIE GGP+T+THP +
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  474  SRYFMTIPEAVSLVIQSGAMMEGGEIFILDMGKPVKITDLARTLISLSGLKPGVDIDIEY  533
            +RYFMTIPEA  LV+Q+GA+  GGEIF+LDMGKPVKI DLA+ LI LSG K   DI+IE+
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEF  536

Query  534  IGLRPGEKLHEELLISEEGVSVTKNDKIFIEKSRMIDFDKYMQRIKEFELDNLDDSEKVI  593
             G+R+GEKL EELL  +E  +    +KI+  K + I+ +   ++I +F +++    + +I
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINE-SVRDEII  595

Query  594  NFIKE  598
             F+++
Sbjct  596  FFVNN  600

157) Glov_1513 in NC_010814


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  368 bits (1383),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 239/531 (46%), Positives = 374/531 (71%), Gaps = 11/531 (2%)

Query  61   LYSNIWRYASLQDVLEIFKAVTLAVIMTAFGLLFVRDTLVFYRTLLILDWGVLMALMLSS  120
            LY   W YAS+ +++ I K+VT +++ T++ + +  +   F R L ++ W + + L+ +S
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGGS  122

Query  121  RFVLRFNRENCSLLPQCLKQQPKGRATLIVGAGDAANLLIKEIQKQHDTGFRIVGLVDDN  180
            R+  R+ R         + ++ K ++TLIVG+G +++LLI+++ +    G   V +VDD+
Sbjct  123  RLSWRIYRKTF------ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  181  PEKQGLKLG-GIPVLGQTSQLPKFISEFRVEDVIIAVPSAHKKFIRKIVACCKSSGVHFK  239
            ++KQ + ++ G+ V G   ++P ++  F +  +IIA+P+  ++ +R I   C ++ V+  
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  240  TLPSIPDLIDGSVSISQIRKVEIDDLLGRDPVQLDQQAISSYLTGKRVLVTGAAGSIGAE  299
             +P+I +++ G + +++++KVE++DLLGRDPV+LD  +IS  LT K +LVTGA+GSIG+E
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  300  ICRQICAYNPAKLLILDSAETPLYHIEKELVAQF-PALRIIPIIADVRNRDRIACLFDSF  358
            ICRQ+C + P ++++L+ +E ++YHI++EL++ +   + +IPIIADV++++R+  + +++
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  359  IPQVVFHAAAYKHVPMMEYNPMEAVCNNVGGTMHLADAAHACRAERFVMISTDKAVNPTN  418
             P VV+HAAA KHVP+MEYNP EA+ NNV GT + A+AA      +FVM+STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  419  VMGASKRAAELYVQAL-AQGSHTCFTTVRFGNVLGSNGSVIPLFKEQILKGGPVTVTDPR  477
            VMGASKR AE+ +Q++  + S T F +VRFGNVLGS GSVIPLFK QI  GGPVTVT+P 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  478  VIRFFMTIPEACQLVLQAGCLGQGGDIFVLDMGEPVRILDLAEELIRLSGLTPYEDIEIV  537
            + R+FMTIPEA +LVLQAG L+ GG+IFVLDMG PV+I+DLA +LIRLSG    EDI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIE  535

Query  538  FSGLRPGEKMFEELLVDGENVLPTAHEKICVVRAINLNYEEILCMVQKLLV  588
            FSG+R+GEK+FEELL  +E       EKI   +  +++ EE+   ++ +L+
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLI  586

158) HMPREF9243_0860 in NC_015278


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  367 bits (1380),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 254/523 (49%), Positives = 381/523 (73%), Gaps = 20/523 (3%)

Query  60   QHSFSGIIRFFN----FSDARQLVLGNVIAGVIAFICGTMVFSRV-SNRYSFLLLFFSTA  114
            +H F+ I+ +++    ++   +L+L  ++ +V + I +T ++  + +++ +FL L+F T 
Sbjct  55   HHVFAQIFDLYHRAWEYASVSELIL--IVKSVTSSIVATGIIVPIFTQQAPFLRLYFITW  112

Query  115  FMLL-----ARMLWRTYVDEKNHVRSKSDNNAPRLLLVGAGDAGNLFIESFAKAG-DRFT  168
             M L     +R+ WR Y   ++   SK +++ P L+ VG+G +G+L+I    ++      
Sbjct  113  MMHLLLIGGSRLSWRIY---RKTFISKEGKKKPTLI-VGGGRGGSLLIRQMMNTPYMGME  168

Query  169  IVGLVDDDPNKQGVYL-RGYPVLGPIDQIPQIIDAKRVDQITITAPSLPSEKVEEVIRLA  227
             V +VDDD+NKQ + +  G  V G I +IP+++    + +I I+ P+L+ +++ E+ +L 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  228  NEKDISVKQMPEVERVMAGDLQVA-MRDIEINDLLGREEVELDDQAAIDTIGGKTILVTG  286
            +  ++ V +MP++E VM+G+++V  ++ +E++DLLGR+ VELD  +    +  KTILVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  287  AGGSIGSEICRQllkfgpakllllgHGENSIYLIDRELNQLNQSGVQIVPIIADIQDRDH  346
            AGGSIGSEICRQ+ KF P +++LLGHGENSIY I++EL  L +  ++++PIIAD+QD+++
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  347  INDLVKFYQPNIIYHAAAHKHVPLMEYNPTEAVKNNIYGTYNVARAAEENGVERFVMIST  406
            ++ +++ Y+P ++YHAAAHKHVPLMEYNP EA+KNN+ GT N A AA    V +FVM+ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  407  DKANNPPNVMGATKRIAEMIVTGL-NENSQCTFSAVRFGNVLGSRGSVIPLFKKQIAAGG  465
            DKA NPPNVMGA+KR+AEM++ ++ NE S+  F AVRFGNVLGSRGSVIPLFKKQI AGG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  466  PVTVTHPDMRRYFMTIPEASRLVIQASSLAEGGELFILNMGKEVYIKDLARKMITLSGYS  525
            PVTVTHP+M RYFMTIPEASRLV+QA++LA GGE+F+L+MGK V I DLA+++I LSGY 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  526  EDEIEIKYVGMRPGEKLYetlllddettdRQVDDKIFVGKVHN  568
            E++I I + G+R+GEKL+E LL  DE    QV +KI+ GKV++
Sbjct  529  EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQK  571

159) Nther_2497 in NC_010718


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  367 bits (1379),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 238/493 (49%), Positives = 364/493 (74%), Gaps = 16/493 (3%)

Query  60   VFRLYHRLWSYASIHDVIVLGTAIT--IGSISVYAATVALDMMFPRSIYLISLFLNLVFL  117
            +F LYHR W YAS+ ++I++  ++T  I + ++  +  + +  F R +Y+I+  ++L+++
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLI  119

Query  118  GGYRLGFRVLNIYKRFGLSPLKKQKPKNRKNVLIVGAGDAGNMALKELNQHQLDLSVNIV  177
            GG RL+ R   IY++  +S     K  ++K  LIVG+G +G++ ++++ +    ++++ V
Sbjct  120  GGSRLSWR---IYRKTFIS-----KEGKKKPTLIVGGGRGGSLLIRQMMNTPY-MGMEPV  170

Query  178  GFLDDDQEKQG-CRVNGVKVLGSTDELVKISKKKDVDEVVIAMPSAPQQVIRYLIKTCSD  236
              +DDD +KQ     +GVKV G   ++  + KK ++  ++IA+P+ +QQ +R + K C +
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  237  YSIKTKIIPAVHDLISGRVSINHLREVEIEDLLKRDPIELDINQIAGYLTNKVVLVTGAG  296
             ++    +P +++++SG + +N L+ VE+EDLL RDP+ELD+  I+  LT+K +LVTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  297  GSIGSELVRQIANFNPQTILLLGHGENSIFEIYREMVEKFPKN-RLVPIIADVKDREKIF  355
            GSIGSE+ RQ+ +F P+ I+LLGHGENSI++I +E++  +  +  ++PIIADV+D+E++ 
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMK  350

Query  356  QIAKDYEPDVVFHAAAHKHVPLMEQNPEEAIKNNIYGTKNLVDAAHHHKSQRFVLVSTDK  415
            ++ + Y P VV+HAAAHKHVPLME NP+EAIKNN+ GT+N  +AA      +FV+VSTDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  416  AVNPTSVMGATKRVAELIVENM-AQTSETKYTAVRFGNVLGSRGSVIPHFKEQISKGGPV  474
            AVNP +VMGA+KRVAE+++++M  +TS T + AVRFGNVLGSRGSVIP FK QI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  475  TITHPEMTRYFMTIPEASQLVIEAGGMSKGGEIYVLDMGQPVKIVDLAKDLIKLSGLEPE  534
            T+THP MTRYFMTIPEAS+LV++AG+++ GGEI+VLDMG+PVKIVDLAK+LI+LSG   E
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  535  KDIKLSYTGIRPG  547
             DI + ++GIR+G
Sbjct  530  EDIGIEFSGIRSG  542

160) bpr_I2544 in NC_014387


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  367 bits (1379),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 247/546 (46%), Positives = 376/546 (69%), Gaps = 26/546 (4%)

Query  71   IFKLYDSLWAYAGEREMQNLVMACVISGVINAIGLQFFKSQSQPVPQSYYFLYTFILISL  130
            IF LY+  W YA+  E+  +V +   S V  +I + +F +Q  P  + Y++     L+ L
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-TQQAPFLRLYFITWMMHLL-L  118

Query  131  IFVSRFSYRFLRSQKHRAENRNNSKAVMVIGAGEAANIIIKDIITSNYSTMSIKCIIDDD  190
            I  SR+S R+ R  K    +  + K+ +++G+G +++++I++++ + Y  M    ++DDD
Sbjct  119  IGGSRLSWRIYR--KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  191  PNKWGKYIQGIRVVGGRDRIEECADLYDIDEIIVAI---------PSVSRPELRKILEIC  241
            +NK     Q + + +G  +++ C    DI E++  +         P++S+  LR I  +C
Sbjct  177  SNK-----QKMSIASG-VKVQGCIK--DIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  242  KNTNCKLRSLPGMYQLVNGDVNVSRLRDVEVEDLLGRDPIAVDMDQIAGYVAGKVVMVTG  301
              TN  +  +P + ++++G+++V++L+ VEVEDLLGRDP+ +DM  I+  ++ K ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  302  GGGSIGSELCRQIAGHKPKRLIIVDIYENNAYDIQQELIRKY-PEMDLVVLIASVRNTLR  360
            +GGSIGSE+CRQ+    P R+++++  EN+ Y+I+QELI  Y  E++++ +IA V++  R
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  361  INNIFEEYKPDIVYHAAAHKHVPLMETSPGEAIKNNVFGTWKTAMAAAMNGTKKFVLIST  420
            ++++ + YKP +VYHAAAHKHVPLME +P EAIKNNV+GT++TA AA +    KFV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  421  DKAVNPTNVMGASKRICEMIVQTFNKHYD-TEFVAVRFGNVLGSNGSVIPLFKKQIASGG  479
            DKAVNP NVMGASKR+ EM++Q+ N++   T+FVAVRFGNVLGS GSVIPLFKKQI +GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  480  PVTVTDPEIIRYFMTITEAVSLVLQAGAYAKGGEIFVLDMGEPVKILDLAENLIKLSGYK  539
            PVTVT+P + RYFMTI EA  LVLQAGA A GGEIFVLDMG PVKI+DLA NLI+LSGYK
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  540  VGEDIKIEFTGLRPGEKLYEEMLMDEEGLQDTSNKMIHIGKPIDMDEMKFFSQLEK--LN  597
              EDI IEF+G+R+GEKL+EE+L  +E   +     I  GK   ++   ++++++   +N
Sbjct  529  -EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  598  VAAREE  603
             + R+E
Sbjct  588  ESVRDE  593

161) Clo1313_0239 in NC_017304


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  367 bits (1380),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 247/545 (46%), Positives = 374/545 (69%), Gaps = 7/545 (1%)

Query  57   NIFGIYSMLWNYASVEELLKIFWATMTSVIVQLLLAAYFNVMFP-VSVYITCWMITFYFI  115
            +IF++Y   W+YASV EL+ I  +  +S++   ++ + F    P + +Y+  WM+ + +I
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  116  GGTRFIVRITRSIkakkrknthkkRIMIIGAGDTASLLIKETKNNKRSIYEPVVAIDDDP  175
            GG+R+  RI R     K  +      +I+G+G  +SLLI++  N      EPV+ +DDD+
Sbjct  120  GGSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  176  KKHNTQI-NGVPIIGGRDKIIEAAKDMSIEEIVLAMPSVSKKETLEIIDLCQKTGCKLKV  234
            +K++  I +GV + G    I E  K  +I  I++A+P++S++   EI  LC+ T   +  
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  235  LPSVYGIVNGEVSIKEIRDVTVEDLLPRDEISLSIEEISGYLKGETILVTGGGGSIGSEL  294
            +P++  +++GE+ ++ ++ V VEDLL RD + L +  IS  L   TILVTG+GGSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  295  CRQIASYEPKTLLVFDIYENNAYELQNELVQKYKGNLDIKVIIGSIRDKKRLDYVFSQYK  354
            CRQ+  + P  +++++  EN+ Y++++EL+  YK ++++  II+ ++DK R+  V   YK
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  355  PGIVFHAAAHKHVPLMEFNPQEAVKNNVFGTLNVAECAHQYNCKKFVLISTDKAVNPTSI  414
            P +V+HAAAHKHVPLME+NPQEA+KNNV+GT N AE A   +  KFV++STDKAVNP ++
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  415  MGATKRIAELIIQYMNS-ISKTKFCAVRFGNVLDSNGSVIPLFKKQIEQGGPITITHPEV  473
            MGA+KR+AE++IQ MN+  SKT F AVRFGNVL+S GSVIPLFKKQIE GGP+T+THP +
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  474  SRYFMTIPEAVSLVIQSGAMMEGGEIFILDMGKPVKITDLARTLISLSGLKPGVDIDIEY  533
            +RYFMTIPEA  LV+Q+GA+  GGEIF+LDMGKPVKI DLA+ LI LSG K   DI+IE+
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEF  536

Query  534  IGLRPGEKLHEELLISEEGVGVTKNDKIFIEKSRMIDFDKYMQRIKEFELDNLDDSEKVI  593
             G+R+GEKL EELL  +E       +KI+  K + I+ +   ++I +F +++    + +I
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINE-SVRDEII  595

Query  594  NFIKE  598
             F+++
Sbjct  596  FFVNN  600

162) capD in NC_014328


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  366 bits (1376),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 249/527 (48%), Positives = 371/527 (71%), Gaps = 13/527 (2%)

Query  52   VFNKVFNLYDSIWKYASVEELisivysvsvsniifviysyFINYKFLENRYYRFPYTVHI  111
            VF ++F+LY+  W YASV ELI IV SV+ S +   I   ++     +  + R+ +    
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT---QQAPFLRLYF----  109

Query  112  IFWILSVLTLGGIRFIYRLLQDKSVGQYKKIRNKRLLIIGAGDASAVLIKEIKKNRNFNY  171
            I W++ +L +GG R+  R+ +   ++  K  ++K  LI+G+G ++++LI+++ +      
Sbjct  110  ITWMMHLLLIGGSRLSWRIYRKTFIS--KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  172  DVVGLVDDDETKRK-KLINGIKVLGGRDDIPRICKERSIEEIIIAMPSADIKTKREIINI  230
            + V +VDDD  K+K  + +G+KV G   DIP + K  +I  IIIA+P+   +  REI ++
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  231  CKSTKCKLKTLPGIYEMIDGNLNMSKLRDVNIEDLLGRDEVKLNNENINKYIKDKIIMVT  290
            C +T+  +  +P I +++ G+++++KL+ V++EDLLGRD V L+  +I+K + +K I+VT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  291  GGGGSIGSELCRQIARFGPKQLLILDIYENNVYDVQMELNYNY-SKLNKAIIIASIRDED  349
            G+GGSIGSE+CRQ+ +F P ++++L+  EN++Y+++ EL   Y   ++   IIA ++D +
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKE  347

Query  350  RLRSIFDKYRPEVVFHAAAHKHVPLMEGNPAEAVKNNIIGTYNVLKCCDEFKVNKFVQIS  409
            R++ + + Y+P VV+HAAAHKHVPLME NP EA+KNN++GT N         V+KFV +S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  410  TDKAVNPTNVMGASKRFCEIMVQAFD-EVSETEYVAVRFGNVLGSNGSVIPLFKKQIAHG  468
            TDKAVNP NVMGASKR  E+++Q+ + E S T++VAVRFGNVLGS GSVIPLFKKQI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  469  GPVTVTHPEINRFFMTIPEAAQLVIQAGAIAHGGEIFVLDMGKPVKIVDLAKDLITLSGY  528
            GPVTVTHP + R+FMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGY
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  529  EPDVDIKIEYTGLRPGEKLYEELLMNEVALTSTEHDKIFVEKPAKID  575
              + DI IE++G+R+GEKL+EELL ++        +KI+  K  KI+
Sbjct  528  KEE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

163) Clocl_4185 in NC_016627


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  366 bits (1375),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 240/486 (50%), Positives = 359/486 (74%), Gaps = 12/486 (2%)

Query  63   FKLYNSLWKYAGIYEMGLIV---GASFVSNSIMISYAFLSKTRVPRSIFPICMLTDIFFI  119
            F LY+  W YA++ E+ LIV    +S+V+ +I+++  F  ++   R  F I  + ++++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVP-IFTQQAPFLRLYF-ITWMMHLLLI  119

Query  120  ASVRFAYRIFRRVVKGEIIRIKNSKRVLIFGAGEAGAIIVKEMKIHPELKSTPVAIIDDD  179
            ++ R++ RI+R+     I +  + K  LI G+G +G++++++M   P +   PV ++DDD
Sbjct  120  GGSRLSWRIYRKTF---ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  180  IFKQGKKI-NGVPIVGQRKDIATVVEKKQIDEIIIAVPSASRKDINEIFAECSKTQCKVK  238
              KQ   I +GV + G  KDI+ +V K +I  IIIA+P+ S++ + EI   C  T+  V 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  239  ILPSVSQLIDESVVMQKVRNVNIEDLLGREPVNLDVNEVASYIKGQVVLVTGGGGSIGSE  298
             +P++ +++   + ++K+++V++EDLLGR+PV+LD+  ++  +  + +LVTG+GGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  299  LCRQIAEFEPKKLIILDNYENNAYDIQNELLH-NKPGLELCTIIANIREKQRMESIFRMY  357
            +CRQ+  F P ++++L++ EN+ Y+I++EL+   K  +E+  IIA++++K+RM  + + Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  358  KPDVVFHAAAHKHVPLMEANPTEAIKNNVFGTLNVAECADKYGVKRFVLISTDKAVNPTN  417
            KP VV+HAAAHKHVPLME NP EAIKNNV+GT N AE A    V +FV++STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  418  IMGATKRIAEMIIQALNRN-SKTEFVAVRFGNVLGSNGSVVPLFKKQIEQGGPVTVTHPE  476
            +MGA+KR+AEM+IQ++N + SKT+FVAVRFGNVLGS GSV+PLFKKQIE GGPVTVTHP 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  477  VTRFFMTIPEAVQLVIQAGAMAKGGEIFVLDMGEPVKIVDLARNLIKLSGYEPDIDINIE  536
            +TR+FMTIPEA +LV+QAGA+A GGEIFVLDMG PVKIVDLA+NLI+LSGY  + DI IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIE  535

Query  537  YTGLRP  542
            ++G+R+
Sbjct  536  FSGIRS  541

164) Tlie_1827 in NC_016148


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  366 bits (1374),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 242/509 (48%), Positives = 375/509 (74%), Gaps = 18/509 (3%)

Query  62   LYHRMWRYASIRELYGLLKAATAGAVI--MVVLIYALGFPTLPRSVYILSWFFIIAFVGS  119
            LYHR W YAS+ EL  ++K+ T++ V   ++V I++   P L   +Y+++W   + ++G+
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLIGG  121

Query  120  SRLGWRLVRDMMLANRNSPSSRVLIIGAGDAGAMVAREIMNNRKLNLEAVGFIDDNPMKQ  179
            SRL+WR+ R   ++ +++     LI+G+G +G+++ R++MN   + +E+V  +DD++ KQ
Sbjct  122  SRLSWRIYRKTFIS-KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  180  KLSI-YGIPVLGTREAIPRIVREYHIDEIIIAMPSAGGRTIREINQICRQIGAKARIFQ-  237
            K+SI  G+ V G    IP +V+ ++I  IIIA+P+ + + +REIN++C   G++  +F+ 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE--GTNVEVFKM  238

Query  238  -GADTLLGRKY---RIKEIELDDLLKREPVKLNLDEIAGYLKDKTVLVSGAGGSIGSELC  293
               + +++      ++K +E++DLL R+PV L++  I+  L +KT+LV+GAGGSIGSE+C
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  294  RQIAVNKPKRLILLDCSENDLFEIENELRENL-PALDIVPELADIRDKERLIHIFGTCRP  352
            RQ+    P R++LL+ +EN +++I++EL       ++++P +AD++DKER+  +  + +P
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  353  QVVFHAAAYKHVPMMEKHPLEAVKNNIFGTRNLAEAADRFQSETFILISTDKAVNPSNVM  412
             VV+HAAA KHVP+ME +P EA+KNN++GTRN AEAA   +   F+++STDKAVNP+NVM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  413  GATKRAAELIIQEMNH-KSQTTFAAVRFGNVLGSRGSVVPIFRKQIEKGGPVTVTHPEMT  471
            GA+KR AE++IQ MN+  S+T F AVRFGNVLGSRGSV+P+F+KQIE GGPVTVTHP MT
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  472  RYFMTIPEAVQLVIQAGAMAMGGEIFVLDMGEPVRIMDLAYDMIRLVGYQPGEDIEIKIT  531
            RYFMTIPEA +LV+QAGA+A GGEIFVLDMG PV+I+DLA ++IRL GY+  EDI I ++
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFS  537

Query  532  GIRPGEKLHEELFAAREQIEATR-HERIF  559
            GIR+GEKL EEL+  +++I++ +  E+I+
Sbjct  538  GIRSGEKLFEELL-NKDEIHPEQVYEKIY  565

165) SP670_0173 in NC_014498


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

166) SPN23F_01140 in NC_011900


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

167) SPCG_0098 in NC_010582


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

168) SPH_0202 in NC_010380


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

169) SPNINV200_00920 in NC_017593


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

170) SPJ_0126 in NC_012466


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

171) SPNOXC_01300 in NC_017592


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

172) SPN034183_01350 in NC_021028


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

173) SPN994038_01350 in NC_021026


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

174) SPN994039_01350 in NC_021005


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

175) SPNA45_01937 in NC_018594


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

176) MYY_0174 in NC_017769


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

177) SPT_0137 in NC_012469


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

178) HMPREF0837_10392 in NC_014251


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

179) SP_0103 in NC_003028


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1367),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

180) SPPN_01040 in NC_015875


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  364 bits (1369),  Expect = 8e-102, Method: Compositional matrix adjust.
 Identities = 250/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  SWQLIYSRRKKGSGDGEHRLTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            SW+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELVKHHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PELVK  +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIILLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

181) SPAP_0145 in NC_014494


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1364),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 247/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A V+K VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

182) capD in NC_008533


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1363),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 354/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIREFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI +F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

183) SPG_0100 in NC_011072


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1364),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 247/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A V+K VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

184) capD in NC_003098


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1363),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 248/483 (52%), Positives = 354/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIREFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI +F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

185) SPN034156_11970 in NC_021006


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1363),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 247/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A V+K VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

186) smi_1982 in NC_013853


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1365),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 247/486 (51%), Positives = 357/486 (74%), Gaps = 9/486 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSDLELVGILDKDAKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P  ++E V ++D D++K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAATGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G +     ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSG-EIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A V+K VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIIEVGIRA  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLEAIDQKIEEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTTHVE  616
            +    E
Sbjct  600  NNKTGE  605

187) GM18_1465 in NC_014973


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1365),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 237/501 (48%), Positives = 360/501 (72%), Gaps = 11/501 (2%)

Query  60   GMYRSIWRYASLQDGYEIFKVVTLSTVGSTLALVYLKGPFALPRSIYFLDWFLLFSMVAT  119
            ++Y+  W YAS+ +   I K VT S V++ + +  +    ++ R +YF+ W + + +++ 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  120  SRLLWRIYRETKVMPSLPKGRKTLIIGAGDAGNLLLKEIRKQAESTYNVIGFVDDDREKW  179
            SRL WRIYR T  ++   K + TLI+G+G +G+LL++++ + +    + +  VDDD +K 
Sbjct  122  SRLSWRIYRKT-FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  180  GMRLA-GVRVLGGTERLSALVRKHNVEEVIFAIPSGDRELMRRVIANCERAKARFKTLPG  238
             M +A GV+V G    ++ LV+K N+  +I+AIP+  ++ +R +   CE ++     +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  239  ITAIIDGKVSMSQIKDVEIEDLLGRDQVMLDQTAIRNYLTDKRVLVTGAAGSIGSEICRQ  298
            I  ++ G + ++++K VE+EDLLGRD V LD ++I + LT+K +LVTGA+GSIGSEICRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  299  VAHFKPAKLVLFDHAETPLFYIEKELAAEF-PDLRIIPMVGDVKNKDRVETVFDEFCPDV  357
            V  F P +++L++H+E +++ I++EL + +  ++ +IP+++DV++K+R+  V + + P V
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  358  VFHAAAYKHVAMMEYNPAEAVLNNVMGSKVVADAAHKTKVRNFVMVSTDKAVNPTNVMGA  417
            V+HAAA KHV++MEYNP EA+ NNV+G++  A+AA  + V +FVMVSTDKAVNP NVMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  418  TKRSAEIYVQALAA-KSHTKFTTVRFGNVLGSNGSVIPLFKEQIRKGGPVTVTDKDVVRY  476
            +KR AE+ +Q++    S T F +VRFGNVLGS GSVIPLFK QI  GGPVTVT+ ++ RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  477  FMTIPEASQLVMQAGCIGHGGEIFVLDMGEPVRILSLAEELIRLSGLIPYKE--IDIEFT  534
            FMTIPEAS+LV+QAG ++ GGEIFVLDMG PV+I+ LA +LIRLSG   YKE  I+IEF+
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG---YKEEDIGIEFS  537

Query  535  GLKPGEKLFEELLIDGEGIKP  555
            G+++GEKLFEELL + + I P
Sbjct  538  GIRSGEKLFEELL-NKDEIHP  557

188) HMPREF1038_00163 in NC_018630


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1362),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 247/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A V+K VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

189) INV104_00820 in NC_017591


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1362),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 247/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A V+K VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

190) SPP_0162 in NC_012467


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  363 bits (1362),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 247/483 (52%), Positives = 355/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDSKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D DS+K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  KLG-GIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   ++PEL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRKF-QGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI  + + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A V+K VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

191) epsC in NC_020291


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  362 bits (1361),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 247/514 (49%), Positives = 369/514 (72%), Gaps = 11/514 (2%)

Query  57   LFKTYDSLWHLTGTDEFLLGVGGNILAGILSIGY-TRIFGSTIP-LNVSVVGILLSIFFV  114
            +F  Y+  W+ ++  E++L +  ++ ++I++ G    IF    P L +  +  ++ ++++
Sbjct  61   IFDLYHRAWEYASVSELIL-IVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  115  LGYRILYRVYRRTLLYIPFKYSSDQRRVMIVGAGSAGTMIINEMMARRELKYNPIVLIDD  174
             G R+  R+YR+T++       + ++  +IVG+G +G+++I +MM    +  +P++++DD
Sbjct  120  GGSRLSWRIYRKTFI----SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  175  DKTKLGKRI-SGVKIEGNRYDIPYIVREQEIDLILIAIPSLDAKNKAEIIEICKDTNCKL  233
            D  K    I SGVK++G   DIP +V+  +I  I+IAIP+L  +   EI  +C +TN  +
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  234  QIIPGMYEILSGDATVSRIKDVDLEDLLGRDPIQLDNKGISDYIEGKTILVTGGGGSIGS  293
              +P + +++SG+  V+++K V++EDLLGRDP++LD  +IS  +  KTILVTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  294  ELCRQIAVFNPKRLIIFDIYENNVYDIQNELREEF-PDMNLTVLIGSVRDRKRLHEVFTK  352
            E+CRQ+  F P R+++++  EN++Y+I++EL   +  ++++  +I+ V+D+ R+  V   
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  353  YKINVVFHAAAHKHVPLMEDSPKEAIKNNVFGTLNLALEASEANISRFVMISTDKAVNPT  412
            YK  VV+HAAAHKHVPLME +P+EAIKNNV+GT N A  A  A++S+FVM+STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  413  NIMGATKRLCEMIIQAMDKQ-SKTEFVAVRFGNVLGSNGSVIPLFKRQIANGGPVTVTHK  471
            N+MGA+KR+ EM+IQ+M+++ SKT+FVAVRFGNVLGS GSVIPLFK+QI  GGPVTVTH 
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  472  KIIRYFMLIPEAAQLVLQAGAFAKGGEIFVLDMGKPVKIYDLACDLIKLSGLEPNRDIKI  531
             + RYFM IPEA++LVLQAGA+A GGEIFVLDMGKPVKI DLA +LI+LSG   + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  532  VFTGLRPGEKLFEELLMSEEGLEDTVHKKIHVGK  565
             F+G+R+GEKLFEELL  +E   + V  KI  GK
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

192) Cbei_4629 in NC_009617


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  362 bits (1361),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 243/514 (48%), Positives = 370/514 (72%), Gaps = 11/514 (2%)

Query  57   LFKMYESLWHLTGTDEFLLGVGGNILAGIISIGY-TRILGNTIP-LNVSVVGILLSIFFV  114
            +F +Y+  W+ ++  E++L +  ++ ++I++ G    I+ +  P L +  +  ++ ++++
Sbjct  61   IFDLYHRAWEYASVSELIL-IVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  115  LGYRILYRVYRRTLLYIPFKYSSDQRRVMIVGAGSAGTMLINEMMARRELKYNPIVLIDD  174
             G R+  R+YR+T++       + ++  +IVG+G +G++LI +MM    +  +P++++DD
Sbjct  120  GGSRLSWRIYRKTFI----SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  175  DKSKLGKRI-SGVKIEGNRYDIPYIVGDQEIDLILIAIPSLDAKNKAEIIEICKNTNCKL  233
            D +K    I SGVK++G   DIP +V   +I  I+IAIP+L  +   EI  +C  TN  +
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  234  QIIPGMYEILSGDATVSRIKDVDLEDLLGRDPIQLDNKGISDYIEGKTILVTGGGGSIGS  293
              +P + +++SG+  V+++K V++EDLLGRDP++LD  +IS  +  KTILVTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  294  ELCRQISVYNPKRLIIFDIYENNVYDIQNELREEF-PDMNLTVLIGSVRDKKRLHEIFTK  352
            E+CRQ+  + P R+++++  EN++Y+I++EL   +  ++++  +I+ V+DK R+  +   
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  353  YRVNVVFHAAAHKHVPLMEDSPKEAIKNNVFGTLNLALEASEANVERFVMISTDKAVNPT  412
            Y+  VV+HAAAHKHVPLME +P+EAIKNNV+GT N A  A  A+V +FVM+STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  413  NIMGATKRLCEMIIQAMDKQ-SRTEFVAVRFGNVLGSNGSVIPLFKRQIANGGPVTVTHK  471
            N+MGA+KR+ EM+IQ+M+++ S+T+FVAVRFGNVLGS GSVIPLFK+QI  GGPVTVTH 
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  472  KIIRYFMLIPEAAQLVLQAGAFARGGEVFVLDMGKPVKIYDLACDLIRLSGLEPNRDIKI  531
             + RYFM IPEA++LVLQAGA+A GGE+FVLDMGKPVKI DLA +LIRLSG   + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  532  VVTGLRPGEKLYEELLMSEEGLENTVHNKIYVGK  565
              +G+R+GEKL+EELL  +E   + V +KIY GK
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

193) EAT1b_1378 in NC_012673


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  362 bits (1361),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 265/551 (49%), Positives = 394/551 (72%), Gaps = 19/551 (3%)

Query  70   VYRIDWRYGSMRELQLLAIVLVMSDTFVLFASYVLLDGFSYQAIFIQSLLAFNG-MLFIR  128
            +Y+  W Y+S+ EL    I++V S T  + A+ +++  F+ QA F++  L F   M+ + 
Sbjct  64   LYHRAWEYASVSEL----ILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLL  117

Query  129  LVARTR---SFFQ--FHAPVSNGKATLVIGGGESGQKIIKELKEHRTNVLHVVGVLDDNP  183
            L++ +R    +++  F +  ++ K+TL++GGG +G  +I+++ +     ++ V V+DD++
Sbjct  118  LIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  184  MLHRLYI-HGTPVIGSIDLLERKIEELNIEVVVLAIPSLPYGDRVQLLKRI-EKTGVESH  241
              +++ I  G  V G I  +   +  +NI  +++AIP+L+  +R++ ++++ E T VE  
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLS-QQRLREINKLCEGTNVEVF  236

Query  242  ALPMLAELASGKVSLNEIREVAIEDLLGREPVQLDVSEISQTLSGLTifisgaggsigsE  301
             +P + ++ SG + +N ++ V +EDLLGR+PV+LD++ IS+ L+  TI+++GAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  302  LCRQLMKFNPGKLILFGHGENSIYAIDREL-RLLGSDTEICPVIGDVQDRARVTEVFDQY  360
            +CRQ+ KF P++++L+GHGENSIY I++EL  L   + E+ P+I+DVQD+ R+  V + Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  361  RPDVVYHAAAHKHVPLMEDNPREAVKNNIYGTKNMVEAADFFEVKRFVMISTDKAVNPTN  420
            +P VVYHAAAHKHVPLME NP+EA+KNN+ GT+N  EAA + EV +FVM+STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  421  VMGATKRVAEMIVQQQARHSETT-FSVVRFGNVLGSRGSVVPLFKEQIQRGGPITVTHPE  479
            VMGA+KRVAEM++Q    ++  T F  VRFGNVLGSRGSV+PLFK QI+ GGP+TVTHP 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  480  MTRYFMTIPEASRLVIQASVRANGGEVFVLDMGNPVKIVDLAKRMITLSGFTLEQIPIHF  539
            MTRYFMTIPEASRLV+QA+  A GGE+FVLDMG+PVKIVDLAK +I LSG+  E+I I+F
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEF  536

Query  540  SGIRPGEKLFEELLATSE-HTNQVYEKIFVGCTRPFKSVDPILKTIEYLLDQSNGLTSFL  598
            SGIR+GEKLFEELL   E H +QVYEKI+ G  + +   +   K  ++L+++S     ++
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVR-DEII  595

Query  599  LFVANNELPEE  609
            +FV NN   EE
Sbjct  596  FFVNNNKTGEE  606

194) Hprae_0363 in NC_017455


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  362 bits (1360),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 246/518 (48%), Positives = 381/518 (74%), Gaps = 11/518 (2%)

Query  62   SLYNKMWQYASMSELYSIFKATLA--INTLFVIYLYFFRVSFPRSIIAINLMTDIFFLGG  119
             LY++ W+YAS+SEL  I K+  +  + T +++ ++  + +F R +  I  M +++++GG
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  120  MRFALRLL-KDFLNRNQNNKSKNRVLIIGAGDAAEMIIREMQKHPEIGKRIIGLVDDDPA  178
             R++ R+  K F++++ ++K+    LI+G+G ++ ++IR+M + P +G   + +VDDD+ 
Sbjct  122  SRLSWRIYRKTFISKEGKKKP---TLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  179  KQALEI-HGYKVLGKTKKIPQLIEEYDVDEVIIAIPSAEGKTIKRFYELSNKKNVKVEIV  237
            KQ + I  G KV G  K IP+L+  +++  +IIAIP+   + ++ +  L +  NV V  +
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM  238

Query  238  PGVYEILKGDVSLNQIREVKVEDLLRRDQVDLISSEISAYLEAKTILVsggggsigsEIC  297
            P + +++ G++ +N+++ V VEDLL RD V+L  + IS  L  KTILV+G+GGSIGSEIC
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  298  RQIAKFNPEQIIILDINENTTYFLERDLKENY-PNLELISIIGSIRDKNKLEKVFNEYSP  356
            RQ+ KF P++I++L+  EN+ Y ++++L   Y  ++E+I+II+ ++DK+++ KV + Y P
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  357  DVVFHAAAHKHVPLMETSPEEAVKNNILGTRNLSQTAADFEIDRFVLISTDKAVNPTNVM  416
             VV+HAAAHKHVPLME +P+EA+KNN+LGTRN +++A   E+ +FV++STDKAVNP NVM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  417  GASKRAAEMIIQTINKQV-KTKFMAVRFGNVLGSQGSVIPLFKKQIAKGGPLTVTHKDIT  475
            GASKR AEM+IQ++N++  KT F+AVRFGNVLGS+GSVIPLFKKQI  GGP+TVTH ++T
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  476  RYFMTIPEASQLVIQAGALGKGGEVFVLDMGEPVKIMELAEDLIALSGLTPYEDIDIDVI  535
            RYFMTIPEAS+LV+QAGAL+ GGE+FVLDMG PVKI++LA +LI LSG    EDI+I+  
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIEFS  537

Query  536  GLRPGEKLYEELLCDTEDNIATEHERIFINNLGAVNQQ  573
            G+R+GEKL+EELL   E +     E+I+  ++  ++++
Sbjct  538  GIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

195) Exig_2574 in NC_010556


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  361 bits (1358),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 238/439 (55%), Positives = 335/439 (77%), Gaps = 5/439 (1%)

Query  148  KRTLIIGAGASGQMITKELKQKKAHILNVVGLLDDLTELKGMMI-HGVPVIGTIDQLECI  206
            K TLI+G+G +G ++ +++ +     ++ V ++DD ++ + M I  GV V G I ++  +
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPEL  200

Query  207  IEEHKIEAVVLAIPSLAYPDRVALLNRIKQ-TKVEAHTLPMLVELASGKVSVNQMREVSI  265
            +   +I  +++AIP+L+  +R+  +N++ + T+VE   +P + ++ SG + VN+++ V +
Sbjct  201  VKKFNIKKIIIAIPTLS-QQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEV  259

Query  266  ADLLGREPVELDITEIEKSVSQATVLVTGAGGSIGSEICRQLIKFKPDHLILLGHGENSI  325
             DLLGR+PVELD++ I K +++ T+LVTGAGGSIGSEICRQ+ KF PD+++LLGHGENSI
Sbjct  260  EDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSI  319

Query  326  YLIRRELEAV-TEGITLHSVIADVQDADRMMDVMERFKPDLVYHAAAHKHVPLMEDNPSE  384
            Y I++EL ++  E I + ++IADVQD +RM  VM+ +KP +VYHAAAHKHVPLME NP E
Sbjct  320  YHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQE  379

Query  385  AVKNNIYGTRNVALAAEAAGVNRFVMISTDKAVNPTSVMGATKRIAEMVIQQIARNSETT  444
            A+KNN+ GTRN A AA  A V++FVM+STDKAVNP +VMGA+KR+AEMVIQ +  ++  T
Sbjct  380  AIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKT  439

Query  445  -FAVVRFGNVLGSRGSVIPLFKDQIAKGGPITVTDPAMTRYFMTIPEASRLVIQASVLAE  503
             F  VRFGNVLGSRGSVIPLFK QI  GGP+TVT+P+MTRYFMTIPEASRLV+QA+ LA 
Sbjct  440  DFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALAT  499

Query  504  GGEVFVLDMGEPVNITTLARNLIHLSGFTEQQIPIVYSGIRKGEKLYeellateevheeR  563
            GGE+FVLDMG PV+I  LA+NLI+LSG+ E++I I +SGIR GEKL+EELL  +E+H E+
Sbjct  500  GGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

Query  564  VFDKILVGKTRPFGSIDPY  582
            V++KI  GK + +   + Y
Sbjct  560  VYEKIYRGKVQKIEKEELY  578

196) Riv7116_0259 in NC_019678


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  359 bits (1350),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 233/534 (44%), Positives = 366/534 (69%), Gaps = 32/534 (5%)

Query  82   FGFYRRYWRYAGVEELSYVAMLIVAAMVIQTLLFDVINFTIPWAVDTLPRSLPFLDGLLS  141
            F++Y+R W YA+V EL  +   + +++V   ++           V  + +  PFL     
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGII-----------VPIFTQQAPFLR----  106

Query  142  CIFIGALRFSVRVVERTRHSRLAFTRRFHNQDER---VLIVGAGSAGVSLVQEMQTSSDL  198
             +++ +    + ++  +R S+  + + F +++ +    LIVG+G +G  L+++M  ++ +
Sbjct  107  -LYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYM  165

Query  199  GFRPVAFIDDDVTKFNARI-RGIHVVGDRHSIPEVLEPLRVDKVIIAMPSVAGEVIREIV  257
            G  PV  +DDD  K +  I  G+ V G    IPE++  + + K+IIA+P+++ + +REI 
Sbjct  166  GMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREIN  225

Query  258  DICKSAGIQACTLPGINEILNGKVSLNSIRDVRIEDLLRREPVQTEIEKVAEFINGKRVL  317
             +C ++ ++   +P I+++++G + +N ++ V +EDLL R+PV+ ++  ++  +  K +L
Sbjct  226  KLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTIL  285

Query  318  ITGAGGSIGSELCRQICSCRPKEIMLVGHGENSVFTIQQELNQLVKLLQEDSKASGYAPR  377
            +TGAGGSIGSE+CRQ+C   P  IML+GHGENS++ I+QE   L+ L +E+         
Sbjct  286  VTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQE---LIGLYKEEIE-------  335

Query  378  ILGFIADIRFKDRLRNAFDKFQPDVVFHAAAHKHVPLMELNSPEAITNNVIGTKNLVEEA  437
            ++ +IAD++ K+R+++  + ++P VV+HAAAHKHVPLME N+ EAI NNV+GT+N  E A
Sbjct  336  VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  438  LRCNVNHFVMISTDKAVNPTNIMGASKRVAEMVVLQAAKQSGKS-YVAVRFGNVLGSRGS  496
               +V+ FVM+STDKAVNP N+MGASKRVAEMV+    ++++K+ +VAVRFGNVLGSRGS
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGS  455

Query  497  VVPTFKKQIAAGGPITVTHPDICRYFMTIPEAVQLVLQAAVLGRGGEVLMLNMGEPVKIV  556
            V+P FKKQI AGGP+TVTHP++ RYFMTIPEA +LVLQA+ L+ GGE+++L+MG PVKIV
Sbjct  456  VIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIV  515

Query  557  DLASELIRLSGYRVNKDIDIVFTGLRPGEKLFEELFIEGEEYDPTEHEKLFMVK  610
            DLA +LIRLSGY+ + DI+I F+G+R+GEKLFEEL+  +E       EK++  K
Sbjct  516  DLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

197) SP70585_0166 in NC_012468


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  358 bits (1345),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 246/483 (51%), Positives = 354/483 (74%), Gaps = 9/483 (1%)

Query  135  TWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFM-DSYQHPTSELELVGILDKDAKKKGQ  193
            +W+ IY R+   S +G  + T+++G+G GG+L++ +  + P   +E V ++D D++K+  
Sbjct  125  SWR-IY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  194  RLG-GIPVLGSYDNLSELAKRHQIERVIVAIPSLDPLEYERILQMCNKLGVKCYKMPKVE  252
             ++ G+ V G   +++EL K+ +I ++I+AIP+L       I ++C+   V  +KMP++E
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  253  TVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQV  312
             V+ G  +    ++K+++ DLLGR+ + LD + ++ ELT KTILVTGAGGSIGSEICRQV
Sbjct  243  NVMSGEIEVNK-LKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  313  SRFNPERIVLLGHGENSIYLVYHELIRE-IQGIDYVPVIADIQDYDRLLQVFEQYKPAIV  371
             +F P+RI+LLGHGENSIY + +ELI    + I+ +P+IAD+QD +R+ +V + YKP +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  372  YHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGAT  431
            YHAAAHKHVP+ME NP+EA+KNN+ GT N A A   A VSK VM+STDKAVNPPNVMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  432  KRVAELIVTGFN-QRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYF  490
            KRVAE+++ + N + S++ + AVRFGNVLGSRGSVIP+F +QI  GGPVTVT+  MTRYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  491  MTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRP  550
            MTIPEASRLV++AGA A +GE+F+LDMGKPVKI DLAK+++ LSG  E +I I   GIR+
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRS  541

Query  551  GEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFAN  610
            GEKL+EELL   E+  +QV +KI+ GKV+ +  E + +KI++F  L  + +++ II F N
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEIIFFVN  599

Query  611  QTT  613
            +  
Sbjct  600  NNK  602

198) Cal6303_1093 in NC_019751


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  357 bits (1340),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 240/528 (46%), Positives = 368/528 (70%), Gaps = 25/528 (4%)

Query  82   LGFYRRYWRYASIEELVYVIVLTASAVVVQAIVFDILDSTVPFTVDELPQSLPFIDGLLS  141
            +++Y+R W YAS+ EL+ ++   +S++V  +I+  I+    PF        L FI  ++ 
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL------RLYFITWMMH  115

Query  142  CVFIGGLRFSFRVTERIKQRRSVFNPQQPVLIIGAGSAGISLVEDMQRSPQLGLRPVAFI  201
             ++IGG R+S R+  +    +     ++P LI+G+G +G  L+ +M  +P +G+ PV  +
Sbjct  116  LLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  202  DDDPQKLNLRIRGIPVVGGCDR-IPEIVQIMGIHRVIIAMPTVAGQVIREIVDICQATGI  260
            DDD++K ++ I +   V GC + IPE+V+   I ++IIA+PT++ Q +REI  +C++T +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  261  HTSTLPGIHEILNGRVRVESIRDVRIEDLLRREPVQTDVHQVSQFIKGKKVLITGAGGSI  320
            +   +P I+++++G + V+ ++ V +EDLL R+PV+ D+  +S+ +  K +L+TGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  321  GSELSRQILKCQPSQIILLGHGENSIFNIqqelqqvvqvlKHDGKVQ--GHTPDILTFIA  378
            GSE+ RQ+ K  P +I+LLGHGENSI++I            H+  +    +  +++ +IA
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHI------------HQELIGLYKEEIEVIPIIA  341

Query  379  DIRFRDRLKHAFEKFQPDVVFHAAAHKHVPLMETNPGEAITNNVIGTQNLVTLALQYNVN  438
            D++ ++R+K   + ++P VV+HAAAHKHVPLME NP EAI NNV+GT+N    A   +V+
Sbjct  342  DVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVS  401

Query  439  HFVMISTDKAVNPTNVMGASKRVAEMLVLEAAKQSGKA-YVAVRFGNVLGSRGSVVPTFK  497
             FVM+STDKAVNP NVMGASKRVAEM++    ++++K+ +VAVRFGNVLGSRGSV+P FK
Sbjct  402  KFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFK  461

Query  498  QQIAAGGPITVTHPDICRYFMTIPEAVQLVLQAAVLGRGGEVLMLNMGEPVKIVDLAEEL  557
            +QI AGGP+TVTHP++ RYFMTIPEA +LVLQA+ L+ GGE+++L+MG PVKIVDLA +L
Sbjct  462  KQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNL  521

Query  558  IRLSGYEVNKDIEIKFTGLRPGEKLFEELFIEGEEYDPTEHEKLFMVR  605
            IRLSGY  + DI I F+G+R+GEKLFEEL+  +E       EK++  +
Sbjct  522  IRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

199) epsC in NC_018870


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  355 bits (1335),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 241/515 (47%), Positives = 361/515 (71%), Gaps = 33/515 (6%)

Query  64   RKMWQYASVREIYDILEGVTIG----GLLVVAFAYVFVYQQGAVHPLPRSVYLIAWLLNL  119
            ++ W+YASV E+  I+ +VT +    G++V  F+     QQ++   L    Y+I+W+++L
Sbjct  66   HRAWEYASVSELILIVKSVTSSIVATGIIVPIFT-----QQAPFLRL----YFITWMMHL  116

Query  120  LLTGGSRFCLRSFRE-FRGNSGADGNEQAEAAPQLRRRALIVGAGDAGAMVVRELQNHPS  178
            LL GGSR+  R +R  F ++ G             ++ +LIVG+G +G++++R++ N P 
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGK------------KKPTLIVGGGRGGSLLIRQMMNTPY  164

Query  179  LGLDPVGFIDDNPHKHGLYLL-GLPVLGRREDIPGVAGKYDVDEIIIAIPSAPGRVIREI  237
            +G++PV  +DD+++K+ + +  G+ V G   DIP +  K+++  IIIAIP+ + + +REI
Sbjct  165  MGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREI  224

Query  238  VDICKKTGARLKTLPGVYELIDGRVSVSQIRDVQVEDLLGREPVQLNLDEIAAYLTGKVI  297
              +C  T   +  +P + +++ G + V++++ V+VEDLLGR+PV+L++  I+  LT K I
Sbjct  225  NKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTI  284

Query  298  LVTGAGGSIGSELCRQIARFNPASLILLDNAENNLFEIEQEIRERF-PGLNAPAQLADIR  356
            LVTGAGGSIGSE+CRQ+ +F P  ++LL+++EN++++I+QE+   +   ++  + +AD++
Sbjct  285  LVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQ  344

Query  357  DRELIELIFEEYRPQVVFHAAAYKHVPMMERFPEHAVSNNVYGTYNVASAAERYGAEIFI  416
            D+E +  + + Y+P VV+HAAA KHVP+ME  P++A+ NNV GT N A AA       F+
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  417  LVSTDKAVRPTSVMGASKRVAELLIQHFDGRSKARGGKTRYAAVRFGNVLGSRGSVVPIF  476
            +VSTDKAV P +VMGASKRVAE++IQ  +  +    +KT + AVRFGNVLGSRGSV+P+F
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNET----SKTDFVAVRFGNVLGSRGSVIPLF  460

Query  477  KRQIARGGPVTVTHPEMVRYFMTIPEAVQLIIQAGALAQGGEIFVLDMGEPVRIVDLASD  536
            K+QI  GGPVTVTHP M RYFMTIPEA +L++QAGALA GGEIFVLDMG PV+IVDLA +
Sbjct  461  KKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKN  520

Query  537  LIRLSGLEPGEDIEIRFTGIRPGEKLKEELFTDRE  571
            LIRLSG    EDI I F+GIR+GEKL EEL+   E
Sbjct  521  LIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDE  554

200) CLH_2929 in NC_010723


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  355 bits (1333),  Expect = 5e-99, Method: Compositional matrix adjust.
 Identities = 243/529 (46%), Positives = 372/529 (71%), Gaps = 9/529 (1%)

Query  57   LFKMYESLWHLTGTDEFllgvggsilagilsigYTRFWGSVIP-LNVSVVGILLSIFFVL  115
            +F +Y+  W+ ++  E++L V +   + + +     +     P L +  +  ++ ++++ 
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  116  GYRILYRVYRRTLLYIPFKYSSDQRRVMIVGAGSAGTMIINEMMARRELKYNPIVLIDDD  175
            G R+  R+YR+T++       + ++  +IVG+G +G+++I +MM    +  +P++++DDD
Sbjct  121  GSRLSWRIYRKTFI----SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  176  KEKLGRRI-SGVKIVGNRYDIPYVVGEQEIDLILIAIPSLDSKNKAEIIDICKKTNCKLQ  234
             +K    I SGVK+ G   DIP +V   +I  I+IAIP+L  +   EI  +C  TN  + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  235  IIPGIYEILSGDANVSRIKDVDLEDLLGRDPIVLDNKGISDYIQGKTILVTGAGGSIGSE  294
             +P I +++SG+ +V+++K V++EDLLGRDP+ LD  +IS  +  KTILVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  295  LCRQISVYNPKRLILFDIYENNIYDIQNELKEEF-PDMNLTVLIGSIRDRQRLHEVFSKY  353
            +CRQ+  + P R++L++  EN+IY+I++EL   +  ++++  +I+ ++D++R+  V   Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  354  KINVVFHAAAHKHVPLMEDSPKEAVKNNVFGTLNLATEASKANIDRFVMISTDKAVNPTN  413
            K  VV+HAAAHKHVPLME +P+EA+KNNV+GT N A  A  A++ +FVM+STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  414  IMGATKRLCEMIVQAMDKQ-SKTEFVAVRFGNVLGSNGSVIPLFKKQIANGGPVTLTHKK  472
            +MGA+KR+ EM++Q+M+++ SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPVT+TH  
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  473  IVRYFMLIPEAAQLVLQAGAFAKGGEVFVLDMGKPVKIYDLACDLIRLSGFEPNRDIKIV  532
            + RYFM IPEA++LVLQAGA+A GGE+FVLDMGKPVKI DLA +LIRLSG+  + DI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIE  535

Query  533  VTGLRPGEKLYEELLMSEEGLKDTDHQKIYVGKPTFEDMDTLNYKLEQL  581
             +G+R+GEKL+EELL  +E   +   +KIY GK    + + L  K++++
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

201) SELR_26940 in NC_017068


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  355 bits (1333),  Expect = 6e-99, Method: Compositional matrix adjust.
 Identities = 243/517 (48%), Positives = 368/517 (72%), Gaps = 5/517 (0%)

Query  63   YGMYHRIWHYARMRDLVAIVGAVTLSQTAVFIITTVADIPVP-RSVIILTWLLSICTIGA  121
            +++YHR W+YA + +L+ IV +VT S  A  II  +     P   + ++TW++ +  IG+
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGG  121

Query  122  SRLMFKVNLDLVTESKGDKENLLIVGAGDAGAMLVRELEQNANATTNIIGFVDDDEKKRK  181
            SRL  ++         G K   LIVG+G +G++L+R++ + +    + +  VDDD +K+K
Sbjct  122  SRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQK  181

Query  182  GRLA-GFPVLGNINELPQVVKANNIDEIVIAIPSADGDTIRHIDNLCRKTGSKVRIMPGI  240
              +A G  V G I+++P++VK  NI  I+IAIP+   + +R+I++LC  T   V  MP I
Sbjct  182  MSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNI  241

Query  241  YEMVSDEMNAGEMreirledllrrdPIHLDFGKITNYIAGKTVLITGAGGSIGSEISRQI  300
             +++S+E++   ++ + +EDLL RDP++LD + I++ ++ KT+L+TGAGGSIGSEI RQ+
Sbjct  242  ENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  301  SRVGAKEIILLGRGENSIYEIHQELKRKFPEQT-YHTVIANITDRERMARIFKRFQPQVV  359
             +  +  I+LLG+GENSIY+IHQEL   + E+     +IA++ D+ERM ++ + ++P VV
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  360  FHAAAHKHVPLMEIQPEEAIRNNVFGTKNVAELSDQNQAEIFVLISTDKAVNPTSVMGAT  419
            +HAAAHKHVPLME +P+EAI+NNV+GT+N AE +   +   FV++STDKAVNP +VMGA+
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  420  KRAAELVLQEINQH-SQTKFVTVRFGNVLGSRGSVVPLFERQIANGGPITVTHKDMTRFF  478
            KR AE+V+Q +N++ S+T FV+VRFGNVLGSRGSV+PLF +QI  GGP+TVTH +MTR+F
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  479  MLIPEAVQLVLQAGSQAEGGEVFLFDMGKPVKIKDMAEDLIRLHGLTPDKDIKIVYTGLR  538
            M IPEA +LVLQAG+ A GGE+F++DMGKPVKI D+A +LIRL G   + DI I ++G+R
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIR  540

Query  539  PGEKLYeelltseegttstKHKKIFKAHIQPLDEADL  575
            +GEKL+EELL  +E        KI+++ +Q ++  +L
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

202) capD in NC_016894


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  354 bits (1330),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 251/529 (48%), Positives = 381/529 (73%), Gaps = 10/529 (1%)

Query  61   FELYSSLWSYASVDEFMKILIAGFVTNVFSTVYLILMGAQL--FFGVYITAMILEVGFIG  118
            F+LY   W YASV E++ +++ +  +++ +T  ++ + +Q   F+ +Y+ + ++++ +IG
Sbjct  62   FDLYHRAWEYASVSELI-LIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  119  GVRFSYrllrnlknknlfnkQEHEKKILIIGSGSTATLIATEIRNHASNYGQVIGFIDDD  178
            G R+S R+ R+    +    +   K  LI+G+G  ++L+  ++ N +    + +  +DDD
Sbjct  121  GSRLSWRIYRKTFISK----EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  179  ENKLNKSI-SGVKVLGNYHDIYGIVYKYHINEIIIAVPTAGPYTVRMVIAECKRTDAKVR  237
             NK + SI SGVKV G   DI  +V K++I+ IIIA+PT +   +R +   C  T+  V 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  238  IMPGIREVIDGQVSLNKIRGVEIEDLLGRDSVNLHVTEVISYIENKTILVTGGGGSIGSE  297
             MP I +V+ G++ +NK++ VE+EDLLGRD+V+L+++ +   + +KTILVTG+GGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQLAKFNPKKLVILDNYENNAYEIQNELIKEYGTKLNLEIIIASVRDRYNIFTIIGSL  357
            +CRQ+ KF P ++++L++ EN+ Y+I++ELI  Y   +++  IIA V+D+  +  ++ + 
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  358  RPDVIFHAAAHKHVPLMEHSPREAIKNNAFGTRNVAEAAHEYDVERFVLISTDKAVNPTN  417
            +P V++HAAAHKHVPLME +P+EAIKNN +GTRN AEAA   +V +FV++STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  418  IMGASKRICEMIIQGLAK-KSKTKFTAVRFGNVLDSNGSVVPLFKKQIKEGGPVTVTHKD  476
            +MGASKR+ EM+IQ++ +  SKT F AVRFGNVL+S GSV+PLFKKQI  GGPVTVTH +
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  477  IIRYFMTIPEAAQLVIQSGAIAKGGEIFILDMGEPVKIYDLAVDLIKLSGLKLDEDIKIE  536
            + RYFMTIPEA++LV+Q+GA+A GGEIF+LDMG PVKI DLA +LI+LSG K +EDI IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIE  535

Query  537  ITGLRPGEKLYEELLMDEEGLTDTKFEKIHIGKPIDIDYTELKKSLDEL  585
            ++G+R+GEKL+EELL  +E   +  +EKI  GK   I+  EL + +D++
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

203) Dred_3050 in NC_009253


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  354 bits (1328),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 263/579 (46%), Positives = 402/579 (70%), Gaps = 23/579 (3%)

Query  6    RIPLLMLCDAVLVNLAFLIPCYIHYHGQFTQEYLADMRGFLLATPVILLVFYGS--KLYH  63
            R+ +L++ D+++V ++ ++  YI     F + Y  ++  +     +I    ++    LYH
Sbjct  9    RFMMLLFIDSIIVTFSVFLGYYIL--EPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  64   RVWAYASTGElltiiqsvslvsllffiltH-FIDEPHLGKTILSFWAFAIIFVGGSRFAW  122
            R W YAS +EL+ I++SV+   +   I+   F +++ + +  +  W   ++++GGSR++W
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  123  RLYVEYKAKKGYV-RMGTPKRALIYGAGSAGALVAREYKN-HYNGNQPVIGFIDDDTKKH  180
            R+Y     +K ++ + G  K +LI G+G +G+L+ R+  N  Y G +PV+  +DDD++K+
Sbjct  127  RIY-----RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-VDDDSNKQ  180

Query  181  HLSI-YDLPVLGGRESIPSLICKHNIDEIIIAMPSVAGKSMRDIIQFCKDTVGEVKILPG  239
             +SI  ++ V G    IP L+ K NI  IIIA+P+++ + +R+I ++C +T  EV  +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  240  VYQFLNGNVSISKIRPVEIEDLLGREPVQVDLKEISLYLKGKVVLVTGAGGSIGSELCRQ  299
            + + ++G++ ++K++ VE+EDLLGR+PV++D+  IS  L  K +LVTGAGGSIGSE+CRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  300  IAQMDPAKIILLGHGENSIHKIWLEL----RDKFPLVPLEVEIADVRDRFKLQLTFEKHQ  355
            + +  P +I+LLGHGENSI  I  EL    ++ + ++P+   IADV+D+ +++   +  +
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPI---IADVQDKERMKKVMQAYK  357

Query  356  PhvvfhaaahkhvPLMEMHPDEAVKTNVFGTKNVAEMADRVGCERFVLISTDKAVNPSSV  415
            P VV+HAAAHKHVPLME +P+EA+K NV+GT+N AE A      +FV++STDKAVNP++V
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  416  MGATKRIAELVIQNLFK-GSHTKFAAVRFGNVLGSRGSVVPIFKEQIARGGPVTVTHPDM  474
            MGA+KR+AE+VIQ++ +  S T F AVRFGNVLGSRGSV+P+FK QI  GGPVTVTHP+M
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  475  TRYFMTIPEAVQLVIQAGAMAEGGEVFLLDMGEPVKIVDLAANLIKLSGFEPGKDIEIKY  534
            TRYFMTIPEA +LV+QAGA+A GGE+F+LDMG PVKIVDLA NLI+LSG+    DI I +
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEF  536

Query  535  TGIRPGEKLFEELLTAEEGSSSTKHKRIFEAKPVEIDEA  573
            +GIR+GEKLFEELL  +E  +     +I+ +K   I+  
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

204) TTE0668 in NC_003869


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  354 bits (1330),  Expect = 9e-99, Method: Compositional matrix adjust.
 Identities = 249/518 (49%), Positives = 363/518 (71%), Gaps = 10/518 (1%)

Query  63   YNKIWRYASLHDIMDLIIFTTIGSAMAA--FVLLFLQIHLPRSIYPLYWFLSALLIGGSR  120
            Y++ W YAS+ +++ LI+ +  +S +A+  +V +F Q      +Y + W +  LLIGGSR
Sbjct  65   YHRAWEYASVSELI-LIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  121  IAYRSYMENSSkvkvknikykkvlivGAGDAGRILVREIKNHPETGLKPVAIVDDDVSKL  180
            ++ R Y         K+ K K  LIVG+G +G +L+R++ N P  G+ PV +VDDD +K 
Sbjct  124  LSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  181  HRSI-DDVPVVGKIDDIQEVITEKEIDEVIFAIPSAPRTVLKKVIDKCSEMRIKVKTLPA  239
              SI  +V V G I DI E++   +I  +I+AIP+ ++  L+ +   C    + V  +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  240  IYELVDGTISISSIRDVDINDLLGREPVKIDLEEISSYIkgkkvmvtggggSIGSELCRQ  299
            I +++ G I ++ ++ V+++DLLGR+PV +D+  IS  +  K ++VTG+GGSIGSE+CRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  300  IARFSPSRLIILDIYENNMYEVEQELKRKY-PELDVICLVANIREEKKINKIFSEYTPDI  358
            + +F+P R+++L+  EN++Y+++QEL   Y  E++VI ++A++++  +++K+   Y P +
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  359  VFHAAAHKHVPLMEVSPHEAIKNNVYGTLNLVKVSDLYNVNRFVMISTDKAVNPTSVMGA  418
            V+HAAAHKHVPLME +P+EAIKNNV GT N    + L +V++FVM+STDKAVNP +VMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  419  SKRICEMIIQEYDK-KSKTEFVAVRFGNVLGSNGSVIPLFKKQIAEGGPVTVTHEEIKRY  477
            SKR+ EM+IQ  ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPVTVTH  + RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  478  FMTIPEAVQLVIQAGAMAKGGEIFVLDMGEPVKIIDLARTLIRLSGFEPDVDIPIKIIGL  537
            FMTIPEA +LV+QAGA+A GGEIFVLDMG PVKI+DLA+ LIRLSG+  + DI I + G+
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGI  539

Query  538  RPGEKLFEELLISDDKYVSTKHEKIFIEKPVSVDYGDL  575
            R+GEKLFEELL  D+       EKI+  K   ++  +L
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

205) Sgly_3011 in NC_015172


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  353 bits (1326),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 260/591 (44%), Positives = 407/591 (69%), Gaps = 29/591 (4%)

Query  5    KRTVFLMFFDAILINLALFGSFYLRLAIEENSSVSTDYYSTY-IDaavfatiailaafH-  62
            +R + L+F+D+I++ +++F ++Y          +   ++  Y I+  +++++ +L + H 
Sbjct  8    QRFMMLLFIDSIIVTFSVFLGYY----------ILEPFFKGYSINVLILSSLILLISHHV  57

Query  63   ---FFGLYKTIWRYASVGELLSITYAvtvgvgitfvivffQAPQRMPYTVSLLF--WLTT  117
               +F+LY   W YASV+EL+ I      +  ++  I+     Q+ P+ + L F  W+  
Sbjct  58   FAQIFDLYHRAWEYASVSELILIV-KSVTSSIVATGIIVPIFTQQAPF-LRLYFITWMMH  115

Query  118  IFLVGGARFTQRLRQENSKHSSGPEQPKRILIIGAGDAGVLALRELKNREFQEGYPIGFI  177
            ++L+GG+R++ R+ +       G  +P   LI+G+G +G L +R++ N  +    P+  +
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPT--LIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  178  DDSRRKISLQL-QGFPVLGSREEIPEVVRKYKVDEIIIAIPSASGETIRELVEICKGTKA  236
            DD   K  + +  G  V G   +IPE+V+K+++  IIIAIP+ S + +RE+  +C GT+ 
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  237  TLKILPGVYDIIGGKLNVSAIRNVQVEDLLGRDPVSVDLEEVAGYLKGQVILVTGAGGSI  296
             +  +P + ++++G ++V+ +++V+VEDLLGRDPV +D+  ++  L  + ILVTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  297  GSELCRQILRFGPEKLILAGRGENSIFEIEQELKK-YPVSAEIL----DIKDAEKVRRIF  351
            GSE+CRQ+ +F P++++L G+GENSI++I+QEL   Y    E++    D++D E+++++ 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  352  QKYKPavvfhaaahkhvPLMENNPEEALRNNIYGTHNLAQAAAETGVKTFVLISTDKAVN  411
            Q YKP VV+HAAAHKHVPLME NP+EA++NN+ GT+N A+AA  + V  FV++STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  412  PTSIMGASKRIAEMVIQDYDK-RSETKFVAVRFGNVLGSRGSVIPTFKKQILAGGPVTVT  470
            P ++MGASKR+AEMVIQ  ++  S T FVAVRFGNVLGSRGSVIP FKKQI AGGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  471  DERMTRYFMTIPEAGQLVIQAGAMASGGEIFILDMGKPVKIIDLARDLIKLSGLEVDKDI  530
            +  MTRYFMTIPEA++LV+QAGA+A+GGEIF+LDMGKPVKI+DLA++LI+LSG   + DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDI  532

Query  531  KIVTTGTRPGEKLFEELLTDEEGTTATKNKRIFVARPNNISSGQINEVVTE  581
             I  +G R+GEKLFEELL  +E        +I+ ++ ++I   ++ + + +
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDD  583

206) CbC4_0991 in NC_015425


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  351 bits (1320),  Expect = 6e-98, Method: Compositional matrix adjust.
 Identities = 238/519 (46%), Positives = 360/519 (70%), Gaps = 15/519 (2%)

Query  32   VFHLYDYIWKYASVDELMSIVYSVSLsniififysyfisyKLLSSVHYRFPATVHIILWV  91
            +F+LY+  W YASV EL+ IV SV+ S +   +         + + +  F   + +I W+
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVP------IFTQQAPF-LRLYFITWM  113

Query  92   LSILALGGTRFMYRIVGRNENTELLNNKVSNVLIIGAGDAGAMLIKEIKKHQSLNYNIVG  151
            + +L +GG+R+  RI  +   +   + K    LI+G+G +G++LI+++ +   +  + V 
Sbjct  114  MHLLLIGGSRLSWRIYRKTFISK--EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  152  LIDDDLSKIG-QVINGIKILGTREEITRICENNNVEEIFIALPSAPLKERKEIYNSCKKT  210
            ++DDD +K    + +G+K+ G   +I  +  + N+  I+IA+P+ + +  +EI + C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  211  GCKLKTLPGIYEIINGAVNISQLRDVDINDLLGRDPIQLNNENINEYINGKVVLVTGGGG  270
               +  +P I ++++G +++++L+ V+++DLLGRDP++L+  +I+  +  K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  271  SIGSELCRQIVKFNPKKLVILDIYENNAYDLQMELR--YKYPELDMDVIIASIRDFKRLQ  328
            SIGSE+CRQ+ KF P ++++L+  EN+ Y+++ EL   YK  E+++  IIA ++D  R++
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  329  EVFEKYKPYVVFHAAAHKHVPLMESNPAEAIKNNIFGTYNVVKCSHIYKVKRFVQISTDK  388
             V + YKPYVV+HAAAHKHVPLME NP EAIKNN++GT N    + +  V +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  389  AVNPTNVMGATKRFCEKIIQAFAKESE-TEYVAVRFGNVLGSNGSVIPLFKRQIKEGGPV  447
            AVNP NVMGA+KR  E +IQ+  +E+  T++VAVRFGNVLGS GSVIPLFK+QI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  448  TVTHPEINRFFMTIPEAAQLVIQAGAMARGGEIFVLDMGEPVKIVDLARDLIRLSGLKPG  507
            TVTHP + R+FMTIPEA++LV+QAGA+A GGEIFVLDMG PVKIVDLA++LIRLSG K  
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  508  EDIKIEYTGLRPGEKLYEELLMDEVALTSTEHEKIFVEK  546
            EDI IE++G+R+GEKL+EELL  +        EKI+  K
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

207) Thexy_1791 in NC_015555


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  351 bits (1320),  Expect = 6e-98, Method: Compositional matrix adjust.
 Identities = 251/560 (45%), Positives = 382/560 (69%), Gaps = 24/560 (4%)

Query  21   AFFMAFFLRFDYHVVEPYFTLYRQSFIIFTLANIST--FIF---FKQYHKIWRYVNLKDL  75
            +++++F + ++Y ++EP+F  Y  + +I++   +     +F   F  YH+ W Y ++ +L
Sbjct  18   SIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEYASVSEL  77

Query  76   IDLMVVITMGSAVSSLI--LFLLQIHLPRSIYPl--swllniiliissRMFYR--YIMSN  129
            I ++  +T +   +++I  +F  Q  + R  +      LL I     S+ +YR  +I  +
Sbjct  78   ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKE  137

Query  130  SKVKIKNIVFKNTLIIGAGSAGQMLIRELRAHPEIGLKPVAILDDDKSKIYRSME-GVPI  188
            +K K        TLI+G+G +G +LIR++   P +G+ PV ++DDD +K   S+  GV +
Sbjct  138  GKKK-------PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  189  VGTLDDIIKAVKENEIDEVIYAIPSASRTVLRKVIDSLSE-LHMKVKTLPGIYELVNGKV  247
             G + DI   VK  +I  +I AIP+ S+  LR  I+ L E  ++ V  +P I ++++G +
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE-INKLCEGTNVEVFKMPNIENVMSGEI  249

Query  248  SVSQLRDVDINDLLGRDPIKIDLDEISSYIKGKRVMVTGGGGSIGSELCRQIAKFNPSHL  307
             V++L+ V+++DLLGRDP+ +D+  IS  +  K ++VTG+GGSIGSE+CRQ+ KF P ++
Sbjct  250  EVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRI  309

Query  308  IILDIYENNMYDIQQELLRKY-PDLRMTCLVASIRDEKKLNIIFKEYKPEIVFHAAAHKH  366
            ++L+  EN++Y+I+QEL+  Y  ++ +  ++A ++D  +++ + + YKP +V+HAAAHKH
Sbjct  310  MLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKH  369

Query  367  VPLMEDSPHEAVKNNVYGTLNLVRCANTYGVKRFVMISTDKAVNPTSVMGATKRICEMII  426
            VPLME +P+EA+KNNV GT N    A+   V +FVM+STDKAVNP +VMGA+KR+ EM+I
Sbjct  370  VPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVI  429

Query  427  QSFDR-MSKTEFVAVRFGNVLGSNGSVIPLFKKQIAEGGPVTVTHEDVRRYFMTIPEAVQ  485
            QS +   SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPVTVTH ++ RYFMTIPEA +
Sbjct  430  QSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASR  489

Query  486  LVIQAGAMAKGGEIFVLDMGEPVKIIDLARDLIRLSGFEPDVDIPIKITGLRPGEKLFEE  545
            LV+QAGA+A GGEIFVLDMG PVKI+DLA++LIRLSG+  + DI I ++G+R+GEKLFEE
Sbjct  490  LVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKLFEE  548

Query  546  LLMTDDKYTSTKHDKIFIEK  565
            LL  D+       +KI+  K
Sbjct  549  LLNKDEIHPEQVYEKIYRGK  568

208) Cagg_1997 in NC_011831


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  351 bits (1318),  Expect = 9e-98, Method: Compositional matrix adjust.
 Identities = 247/583 (43%), Positives = 394/583 (68%), Gaps = 29/583 (4%)

Query  8    PTRNRYFFLL--DTILLPIAAYLSFVVRLDELPSGAALMGWFILAALATPIHLFVFRQL-  64
            + ++R+  LL  D+I++ ++ +L++ + L+ +  G ++   ++ + +    H  VF Q+ 
Sbjct  5    SIKQRFMMLLFIDSIIVTFSVFLGYYI-LEPFFKGYSINVLILSSLILLISHH-VFAQIF  62

Query  65   GVYARYWRYASLDELLLLISAVSLAMIIAAPTTFIVAGIIPMALLPRSVPVIFFCF----  120
            ++Y R W YAS+ EL+L++ +V+        ++++ +GII ++++ +  P + + F    
Sbjct  63   DLYHRAWEYASVSELILIVKSVT--------SSIVATGII-VPIFTQQAPFLRLYFITWM  113

Query  121  -NLVMTIGPRLLSRLHWHHQLMQRKRKGEINGKQQRVLIMGAGSAGTMIARELRDNPQLG  179
             +L++  G    SRL W+   + RK     +GK++  LI+G+G +G+++ R++ + P +G
Sbjct  114  MHLLLIGG----SRLSWR---IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  180  MVAVGFLDDDPLKFGMCI-YGIPVLGNRFDIPRLAREYSAHLVIIAMPSATGKEIRSIVE  238
            M +V  +DDD+ K  M I  G+ V G   DIP L + ++   +IIA+P+ + + +R I  
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  239  LCERTGVKTKIMPGLYEMLDGKVSVNQLRNVQIEDLLRRKPVQTDIVAVHNLLRGKRVMV  298
            LCE T V    MP + +++ G + VN+L++V++EDLL R PV+ D+ ++ + L  K ++V
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  299  TGGGGSIGSELCRQILRAEPAELIILGHGENSVFTIEQELRRQVTSATRLTTIIADIRFA  358
            TG+GGSIGSE+CRQ+ +  P  +++LGHGENS++ I+QEL         +  IIAD++  
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDK  346

Query  359  ERVMHIFEQYQPEIVFHAAAHKHVPLMELHPSEAVTNNVLGTRNLLSAAMQVNVSHFVMI  418
            ER+  + + Y+P +V+HAAAHKHVPLME +P EA+ NNVLGTRN   AA   +VS FVM+
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  419  SSDKAVNPTSVMGATKRVAELLVHEAARLTGRA-YVAVRFGNVLGSRGSVVLTFKQQIAA  477
            S+DKAVNP +VMGA+KRVAE++++     T+++ +VAVRFGNVLGSRGSV+  FK+QI A
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  478  GGPVTVTHPEMRRFFMTIPEAVQLTLQASVLGKGGEVFVLDMGEPIRIVDLARDMIELSG  537
            GGPVTVTHP M R+FMTIPEA +L LQA+ L+ GGE+FVLDMG P++IVDLA+++I LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  538  LQVGRDIDIVFTGLRPGEKLYEELFIEGEEYQRTEHAKIFIAR  580
             +   DI+I F+G+R+GEKL+EEL+  +E        KI+ ++
Sbjct  527  YK-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

209) CLS_02560 in NC_021047


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  349 bits (1312),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 242/525 (47%), Positives = 361/525 (69%), Gaps = 9/525 (1%)

Query  71   HLYSTMWSVAGIRE---VIRIVLSCGLSTVLQIAGMTLLQFFMPRSYYIISFVALCIAVT  127
            +LY   W  A++ E   +++ V S  ++T + ++  T    F+ R Y+I   + L + + 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL-RLYFITWMMHL-LLIG  120

Query  128  GIRLSYRIKHSLFPSGNRGGSRIMIVGAGTSGSVILKEMMTSRHTN-GTVVCFADDDINK  186
            G RLS RI +  F S +      +IVG+G +GS+++++MM +       V+   DD  ++
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  187  KGKYLNGVPIAGGREEIPELAKQYRVDEIYVAIPSAPAKERKKILEICRETDCKIKMLPG  246
            K    +GV + G   +IPEL K++ +  I +AIP+ + +  + I  +C  T+  +  +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  247  IYQLLNGEVSVAKLREVQIEDLLGRDPIRVNLDEIMGYVQDKVILVTGGGGSIGSELCRQ  306
            I ++++GE+ V KL+ V++EDLLGRDP+ +++  I   + +K ILVTG+GGSIGSE+CRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  307  IASHRPKQLIVFDVYKNNAYDLQQELERSF-PELNLTVLIGSVRNTHRIESVFEQYRPDI  365
            +    P ++++++   N+ Y+++QEL   +  E+++  +I+ V++ +R+  V + Y+P +
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  366  VYHAAAHKHVPLMENSPNEAIKNNVFGTYKTARAAGKYGAKRFVLISTDKAVNPTNIMGA  425
            VYHAAAHKHVPLME +P+EAIKNNV+GT +TA AA      +FV++STDKAVNP N+MGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  426  SKRMCEMVIQMMDH-RYRTEFVAVRFGNVLGSNGSVIPLFKKQIAEGGPVTVTHPDIIRY  484
            SKR+ EMVIQ M++   +T+FVAVRFGNVLGS GSVIPLFKKQI  GGPVTVTHP++ RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  485  FMTIPEAVSLVLQAGAYAKGGEIFVLNMGEPVKILDLAKNLIRLSGYVPGEDIAIEFTGL  544
            FMTIPEA  LVLQAGA A GGEIFVL+MG PVKI+DLAKNLIRLSGY   EDI+IEF+G+
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIGIEFSGI  539

Query  545  RPGEKLYEEMLMDEEGMQDTPNKLIHIGKPIEFDEDEFQKQLDEL  589
            R+GEKL+EE+L  +E   +     I  GK   ++ +E+ +++D++
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

210) CD630_27690 in NC_009089


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  349 bits (1312),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 259/584 (45%), Positives = 404/584 (70%), Gaps = 19/584 (3%)

Query  23   RHLTLLILDICSVLVAFRMSLS---LTGNLNAFTTNDIIISVCIYIVLHIVSFRLFKCYN  79
            R + LL++D  S++V+F + L+   L   +++++ N +I+S  I ++ H V  ++F  Y+
Sbjct  9    RFMMLLFID--SIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  80   TLWRYAGEEEIISIFVATLAYLIPIYIINKLLGFDYPIM-FYVLNTIFIIMFTSGARIAY  138
              W YA+  E+I I  +  + +++  II  ++  + P++ +Y +  +  +++ +G+R++ 
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  139  RAIRIVMNKTY--SRGKVSNILIIGAGDAGEMVIQELKRNPELKKVAVAIIDDDKNKIG-  195
            R  R    KT+    GK    LI+G+G +G ++I+++   P +   +V ++DDD NK   
Sbjct  127  RIYR----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  196  RIIHNVKIVGTTSDIKDVVEKYNVDEIIFSIANIEkrrkkdiidiCKNTNCKIKTIPGIY  255
             I   VK+ G   DI ++V K+N+  II++I+ + ++R ++I  +C  TN  +  +P I 
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  256  EIIDGKVDIKQIREVEIEDLLGREPIKTNLREISNYIEGKVILitggggsigsELCRQIA  315
            +++ G +++++++ VE+EDLLGR+P+  ++  IS+ +  K IL+TG+GGSIGSE+CRQ+ 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  316  GFNPKELIIVDNYENNAYSIQQELLRKYKNKLDLKTVIASIREEKRMDEIFNKYKPEVVF  375
             F P  ++++++ EN+ Y I+QEL+  YK+ +++  +IA +++  RM  + + YKP VV+
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  376  HAAAHKHVPLMESSPGEAIKNNIFGTLNIAGLSSKYRAKKFVLISTDKAVNPTNIMGATK  435
            HAAAHKHVPLME +P EAIKNN++GT N A  +      KFV++STDKAVNP N+MGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  436  RAAEMIIQTMNAE-SQTEFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTHPDIIRYFM  494
            R AEM+IQ+MN E S+T+FVAVRFGNVLGS GSVIPLFKKQIE GGPVTVTHP++ RYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  495  TIPEAVGLVIQAGAMAKGGEIFVLDMGEPVRILDLAKNLIKFSGFEPDVDIKIEFSGLRP  554
            TIPEA  LV+QAGA+A GGEIFVLDMG PV+I+DLAKNLI++SG+  + DI IEFSG+R+
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRS  541

Query  555  GEKLYEELLMSEEGLLDTEHKKIFIGRPIDVDRE----KITKYL  594
            GEKL+EELL  +E   +    KI+ G+   +++E    KI  +L
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

211) CLL_A3186 in NC_010674


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  348 bits (1307),  Expect = 6e-97, Method: Compositional matrix adjust.
 Identities = 242/529 (46%), Positives = 371/529 (71%), Gaps = 9/529 (1%)

Query  57   LFKMYESLWHLTGTDEFllgvggsilagilsigYTRFWGSVIP-LNVSVVGILLSIFFVL  115
            +F +Y+  W+ ++  E++L V +   + + +     +     P L +  +  ++ ++++ 
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  116  GYRILYRVYRRTLLYIPFKYSSDQRRVMIVGAGSAGTMIINEMMARRELKYNPIVLIDDD  175
            G R+  R+YR+T++       + ++  +IVG+G +G+++I +MM    +  +P++++DDD
Sbjct  121  GSRLSWRIYRKTFI----SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  176  KEKLGRRI-SGVKIVGNRYDIPYVVGEQEidlilisipsldsKNKAEIIDICKKTNCKLQ  234
             +K    I SGVK+ G   DIP +V   +I  I+I+IP+L  +   EI  +C  TN  + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  235  IIPGIYEILSGDANVSRIKDVDLEDLLGRDPIVLDNKGISDYIQGKTILVTGAGGSIGSE  294
             +P I +++SG+ +V+++K V++EDLLGRDP+ LD  +IS  +  KTILVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  295  LCRQISVYNPKRLILFDIYENNIYDIQNELKEEF-PDMNLTVLIGSIRDRQRLHEVFSKY  353
            +CRQ+  + P R++L++  EN+IY+I++EL   +  ++++  +I+ ++D++R+  V   Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  354  KINVVFHAAAHKHVPLMEDSPKEAVKNNVFGTLNLATEASKAKIDRFVMISTDKAVNPTN  413
            K  VV+HAAAHKHVPLME +P+EA+KNNV+GT N A  A  A + +FVM+STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  414  IMGATKRLCEMIVQAMDKQ-SKTEFVAVRFGNVLGSNGSVIPLFKKQIANGGPVTLTHKK  472
            +MGA+KR+ EM++Q+M+++ SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPVT+TH  
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  473  IVRYFMLIPEAAQLVLQAGAFAKGGEVFVLDMGKPVKIYDLACDLIRLSGFEPNRDIKIV  532
            + RYFM IPEA++LVLQAGA+A GGE+FVLDMGKPVKI DLA +LIRLSG+  + DI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIE  535

Query  533  VTGLRPGEKLYEELLMSEEGLKDTAHQKIYVGKPTFEDMDTLNYKLEQL  581
             +G+R+GEKL+EELL  +E   +   +KIY GK    + + L  K++++
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

212) Acear_2111 in NC_014378


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 244/524 (47%), Positives = 385/524 (74%), Gaps = 9/524 (1%)

Query  62   GLYKKMWHYASINELKSIIRIVA--LINLSFTLYIFLAQISFSRSVIIISGVLNilflgg  119
            +LY + W+YAS++EL  I++ V+  ++  ++ + IF  Q +F R + +I+ ++++L++GG
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  120  lrfllrliKDYLEYERCDGADTKVLIVGAGDAAEILIREMYKHPELEKEIVGLVDDDPEK  179
             R+  R+ +    +   +G     LIVG+G ++ +LIR+M + P +  E V +VDDD++K
Sbjct  122  SRLSWRIYRK--TFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  180  LGLEI-HGKKVLGDRYDIPDIIEEYDVCEVIIAIPSTAGEAIEKIYDLSNQDGVEIKIVP  238
              + I  G KV G   DIP+++  +++  +IIAIP+ + + +  I  L +   VE+  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  239  GLNEIINDGFNLNQIREVGVEDLLRREQVDLNTDQICSYLKDKTVLVTGGGGSIGSELCR  298
             +++++++ +++N+++ V VEDLL R+ V+L+   I   L +KT+LVTG+GGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  299  QIAHFSPERLIIFDISENNTYFIDLELKEKF-NNLEIIPVIGSIQDKHKLEQTFERYQPD  357
            Q+  F+P+R+++++ +EN+ Y I+ EL   + +++E+IP+I+ +QDK+++ +  + Y+P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  358  VVFHAAAHKHVPLMEHNPEEAVKNNIFGTKRLAETADECNVERFVLISTDKAVNPTNVMG  417
            VV+HAAAHKHVPLME NP+EA+KNN++GT+  AE+A   +V +FV++STDKAVNP NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  418  STKRTAEMIIQGLNKE-SKTKFMAVRFGNVLGSKGSVIPLFKRQIAQGGPVTVTHKEVER  476
            ++KR AEM+IQ++N+E SKT F+AVRFGNVLGS+GSVIPLFK+QI  GGPVTVTH  + R
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  477  YFMTIPEAAQLVIQAGSLGTGGEVFVLDMGEPVKIIDLAKDLIKLSglevgedieieiig  536
            YFMTIPEA++LV+QAG+L+TGGE+FVLDMG PVKI+DLAK+LI+LS     EDI IE+ G
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLS-GYKEEDIGIEFSG  538

Query  537  LRPGEKLSEELLYDDENTISTDHDRIFITNLNGVSQESLNSKLD  580
            +R+GEKL EELL  DE       ++I+  +++ + +E L +K+D
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

213) capDb in NC_020516


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  347 bits (1304),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 232/536 (44%), Positives = 371/536 (70%), Gaps = 17/536 (3%)

Query  61   GLYRGIWVFASLPDLARVLRAVAISSLAVWAFVAVYRASPGVPRSTLILYP---MLLVLI  117
            +LY+  W +AS+++L  ++++V+ S +A   +V+++   +   R    LY    M+ +L+
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR----LYFITWMMHLLL  118

Query  118  MAGGRAAYRMWKEHR-LYGGLIAKGKPvvvvgagrggaMLLRELQRSP--DWRVVGLVDD  174
            ++G+R +   W+  R  + +  +K KP ++VG+GRGG++L+R++  +P  +   V +VDD
Sbjct  119  IGGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  175  DSDKWGRELL-GLPVLGPVKALPQILVNERVEHVILAMPSAATKVRRAATDLAVHAGAKV  233
            DS+K    +  G+ V G +K +P+++ +  +  +I+A+P+ + +  R    L   +   V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  234  FMVPGLEDVMAGRVAVSSLRRVEIEDLLGREPVWIDTPHIEAMFKGKVVLVTGAGGSIGS  293
            F +P +E+VM+G + V+ L++VE+EDLLGR+PV +D + I   +  K +LVTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  294  ELCRQLARFAPRRVVLYEQNEFALYTM-EQWFANHAQGLEIVSLAGDVKDAARLDEVFAA  352
            E+CRQ+ +F+P R++L  + E ++Y + ++ ++   + +E++++ +DV+D  R+  V  A
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  353  WRPEVVFHAAAYKHVPLMESANAWQAVRNNVLGTLRVGEAAQHHGAGRFILVSTDKAVNP  412
             +P VV+HAAA KHVPLME  N+ +A++NNVLGT   +EAA+    ++F++VSTDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  413  TNVMGASKRLAELVCHALQQRGQGTQFEIVRFGNVLGSTGSVIPKFQEQIARGGPVTVTH  472
             NVMGASKR+AE+V +++++    T+F  VRFGNVLGS GSVIP F+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  473  PEITRYFMSIPEAAQLVLQAAAMGQGGEIFVLDMGDPVKIVDLARNMIRLSGYTEGEIRI  532
            P +TRYFM+IPEA++LVLQA+A++ GGEIFVLDMG PVKIVDLA+N+IRLSGY E +I I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  533  EFTGLRPGEKLYEELLADAEKTRETPHAKLRIARSRSVA-PAFFADLKSWLVQPGV  587
            EF+G+R+GEKL+EELL   E   E    K+  ++ + +    ++  +   L++ +V
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

214) Vpar_0669 in NC_013520


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  346 bits (1300),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 249/530 (47%), Positives = 373/530 (71%), Gaps = 12/530 (2%)

Query  59   IMHLYTRIWRYAGMREVLAVFVATTIGTALFYSSMFV--FGKSLP-RSIYFITWFLTTGA  115
            I +LY R W YA++ E+  +++  ++ +++  ++++V  F +  P   +YFITW +    
Sbjct  61   IFDLYHRAWEYASVSEL--ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLL  118

Query  116  VGMGRMLLHYVALHYSSGDDGESGQVNTLiigagdagatiaREIERYHKRSRRVIGYVDD  175
            +G +R+  +     + S ++       TLI+G+G +G+ + R++      +   +  VDD
Sbjct  119  IGGSRLSWRIYRKTFISKEGKKK---PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  176  DMFKHN-RLMNGFRILGNREDIPALVAKYKVEEIIIAMPSVKRDIIQEIMEICSPLKCKI  234
            D  K++  + +G ++ G   DIP LV K+++  IIIA+P++ ++ ++EI  +C   +  +
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  235  NILPGMYQLLDDEVLVSHLHPVSIEDLLERDEIQLDTSKVETYLKDKVVLVTGAGGSIGS  294
              +P + +++ +E+ V+ L  V +EDLL RD ++LD + +   L +K +LVTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  295  EICRQVLRVkpkkllllGHGENSIYLIHQELRSI-APEGTLVPIIADIRDKNQLEQIFKN  353
            EICRQV +  P +++LLGHGENSIY IHQEL ++   E  ++PIIAD++DK+++ ++ + 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  354  YNPDVVFHAAAHKHVPLMEIQPIAAVLNNIYGTRNVADVAGAHGVDRFVMISTDKAVNPT  413
            Y+P VV+HAAAHKHVPLME +P  A+ NN+ GTRN A+ A    V +FVM+STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  414  SVMGATKRVAEKVVLGMNH-TYDTKFITVRFGNVLGSRGSVIPLFRKQIEAGAPVTVTDP  472
            +VMGA+KRVAE V+ +MN+ T  T F++VRFGNVLGSRGSVIPLF+KQIEAG+PVTVT+P
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  473  EMTRYFMTIPEASQLVLQAGAMGNGGEVFLLDMGEPVKIVDLAKNMIRLSGFEPNKDIRI  532
             MTRYFMTIPEAS+LVLQAGA++ GGE+F+LDMG PVKIVDLAKN+IRLSG+  + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGI  534

Query  533  EFTGLRPGEKLYEELLTAEEGTNTTTHKKIFEAALEDVNQEWLSREIERF  582
            EF+G+R+GEKL+EELL  +E        KI+ + ++ +++E L   I+ F
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

215) Cphy_3494 in NC_010001


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  346 bits (1299),  Expect = 3e-96, Method: Compositional matrix adjust.
 Identities = 245/527 (47%), Positives = 378/527 (72%), Gaps = 9/527 (1%)

Query  69   IFRLYHSLWLFAGITELENIIAASIG--VSALQVIGFILLKLPIPRSYFFIFPVLLIIAT  126
            IF LYH  W +A+++EL  I+ +  +  V++  ++ ++  + P+ R YF+   + L++  
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  127  MASRFTYRAVRVKLRKRENGKSCENVMVIGAGEASNMIIKEIINSDHIHKVVKCIIDDAE  186
             +SR++ R  R  +  +E  K     +++G+G +++++I++++N+  +      ++DD  
Sbjct  121  -GSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  187  DKLGRYI-HGIKVIGSRDTIIDNVMKYEINEIIIAMPSVSRKEISKILEICKETDCKLYI  245
            +K    I  G+KV G    I + V K++I+ IIIA+P++S++ +  I  +C  T+  ++ 
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  246  LPGMYQFLNGEVGVSELRGVEVEDLLGRDPIRVDLDSIMGYVSDKVVLVTGGGGSIGSEL  305
            +P + + ++GE+ V+ L+ VEVEDLLGRDP+ +D+ SI   +++K +LVTG+GGSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  306  CRQIAGHKPKQLVIVDIYENNAYDIQQELQKRY-PNLDIVTLIGSVRNEKRLDKIFDTYR  364
            CRQ+    P ++++++  EN+ Y+I+QEL   Y  +++++ +I+ V++  R+ K+ ++Y+
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  365  PNIVYHAAAHKHVPLMEDSPNEAVKNNVFGTFKTAQAADKYGVEKFVLISSDKAVNPTNI  424
            P +VYHAAAHKHVPLME +P+EA+KNNV+GT +TA+AA    V KFV++S+DKAVNP N+
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  425  MGATKRMCEMIVQTFNR-KSKTEFVAVRFGNVLGSNGSVIPLFKKQIEAGGPVTVTHPDI  483
            MGA+KR+ EM++Q+ N   SKT+FVAVRFGNVLGS GSVIPLFKKQIEAGGPVTVTHP++
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  484  IRYFMTIPEAVSLVLQAGAYAKGGEIFVLDMGEPVKILDLATNLIRLSGYIPDVDIKIKF  543
             RYFMTIPEA  LVLQAGA A GGEIFVLDMG PVKI+DLA NLIRLSGY  + DI I F
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEF  536

Query  544  TGLRPgeklyeellmeeeglgeteNSQIFIGKPLKIDDEKFHHQLEE  590
            +G+R+GEKL+EELL  +E   E    +I+ GK  KI+ E + +++++
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDD  583

216) yveM in NC_012491


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  345 bits (1297),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 244/525 (47%), Positives = 376/525 (72%), Gaps = 8/525 (1%)

Query  61   QLYRPVFRYVSVRELVSIIFATSFSVLALYLVLKMTYLLGWSVRFPTSLFLMTLAFVLLG  120
            +LY+    Y SV EL+ I+ + + S++A  +++    ++     F   L+++T    LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVP---IFTQQAPF-LRLYFITWMMHLLL  118

Query  121  ITGSRFVWKWWYEEREKRTQDRRRTLIIGAGSAGVLVAREMKTSPLSELRPVAFIDDEPS  180
            I GSR+ W+        +   ++ TLI+G+G +G L+ R+M  +P   + PV  +DD+++
Sbjct  119  IGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  181  KQNLRV-YGLPvvgnradvvrvvQRLSISDIVIAMPSASRQTIKEIFDICKTTRASVKIL  239
            KQ++ +  G+ V G   D+  +V++++I  I+IA+P+ S+Q ++EI  +C  T   V  +
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM  238

Query  240  PHVADIISGKITMNMIRDVALEDLLGREPVQVNLEEITGYLRQQVVLVTGAGGSIGSELC  299
            P++ +++SG I +N ++ V +EDLLGR+PV++++  I+  L ++ +LVTGAGGSIGSE+C
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  300  RQIARFGPRKLLLLGNEENGIFEMGLELSRLFPEQ-ETVSLIADIRDRQRISSIMHEYCP  358
            RQ+ +F P +++LLG+ EN+I+++  EL  L+ E+ E +++IAD++D++R+  +M+ Y P
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKP  358

Query  359  avvfhaaahkhvPLMENNPCEALKNNILGTKNVAECALETSVSHFILISTDKAVNPTSVM  418
             VV+HAAAHKHVPLME NP EA+KNN+LGT+N AE A  + VS F+++STDKAVNP +VM
Sbjct  359  YVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  419  GATKRIAELLIQG-YNHFGLTRFAAVRFGNVLGSRGSVVPVFLNQIRAGGPITITHPDME  477
            GA+KR+AE++IQ+  N+ + T F AVRFGNVLGSRGSV+P+F +QI AGGP+T+THP+M 
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  478  RFFMTIPEAAQLVIQAGALAQGGEIFILDMGKPVKIVDMALDLIRLAGLEPGKDISIVFT  537
            R+FMTIPEA++LV+QAGALA GGEIF+LDMGKPVKIVD+A +LIRL+G     DI+I F+
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFS  537

Query  538  GIRSGEKLYEEILTAEEGLSSTCHNRIFIGKPLDFSWNELLAGIA  582
            GIRSGEKL+EE+L  +E  +    ++I+ GK   +  +EL   I 
Sbjct  538  GIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

217) ROI_04900 in NC_021040


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  345 bits (1294),  Expect = 7e-96, Method: Compositional matrix adjust.
 Identities = 245/537 (46%), Positives = 376/537 (71%), Gaps = 16/537 (2%)

Query  72   LYSSLWSYAGALEMMYVVSACILDAIVVAALILVRNWGDMFPVPRSFYILYGLFLLVLIM  131
            LY   W YA+  E++ +V +  + + +VA+ I+V    +  P  R ++I   + LL LI 
Sbjct  64   LYHRAWEYASVSELILIVKS--VTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL-LIG  120

Query  132  GCRYSYRGLRAIRNMRRDGTYRRNVLVIGAGEAGNQLIKEINNSRYvkkkvvgvidddkT  191
            G R S R  R    + ++G  ++  L++G+G +G+ LI+++ N+ Y+    V V+DDD  
Sbjct  121  GSRLSWRIYRKT-FISKEGK-KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  192  KIGNYIHGAKVIGDRSCIRDK---VLELHVHEIIIAMPSASPKQMKGILDICKETGCELK  248
            K    I ++  +  ++CI+D    V  +++  IIIA+P+ S ++++ I  +C  T  E+ 
Sbjct  179  KQKMSIASG--VKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  249  RLPGIYQLVNGEVGISKLKDVDVNDLLGREPVMVNLESIMGYVSGKVIMVTGGGGSIGSE  308
            ++P I ++++GE+ ++KLK V+V+DLLGR+PV +++ SI   ++ K I+VTG+GGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  309  LCRQIAGHKPKQLIILDIYENTTYDIQNELKVKF-PDLDLVVLIGSVRNTNRMNWIFETY  367
            +CRQ+    P ++++L+  EN+ Y+I++EL   +  +++++ +I+ V++ +RM+ + ++Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  368  HPEIIYHAAAHKHVPLMEESPNEAIKNNVLGTWKIVQAADRYHVKRFVMISTDKAVNPTN  427
             P ++YHAAAHKHVPLME +P+EAIKNNVLGT++  +AA   +V +FVM+STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  428  IMGASKRICEMIIQT-YNKRSETEYVAVRFGNVLGSNGSVIPLFKKQIERGGPVTVTDPN  486
            +MGASKR+ EM+IQ+  N  S T++VAVRFGNVLGS GSVIPLFKKQIE GGPVTVT+P 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  487  IVRYFMTIPEAVSLVLQAGAYAKGGEIFVLDMGEPVKILDLARNLILLSGHKPDEDIQIV  546
            + RYFMTIPEA  LVLQAGA A GGEIFVLDMG PVKI+DLA+NLI LSG K +EDI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIE  535

Query  547  FTGLRPGEKLYEEMLMDEEGLQDTENNLIHIGKPIELDEEKFLDQLEKLKEYVVTEP  603
            F+G+R+GEKL+EE+L  +E   +   + I  GK   ++ E + +   K+ ++++ E+
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYN---KIDDFLINES  589

218) capD in NC_009706


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  344 bits (1291),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 249/537 (47%), Positives = 375/537 (70%), Gaps = 15/537 (2%)

Query  54   NKFFNLYNNIWKYASVEELISIVYSVSLSNIIF-IIYSYFVNYKILENRYYRFPYTVHII  112
             ++F+LY+  W YASV ELI IV SV+ S +   II + F +    +  + R+ +    I
Sbjct  59   AQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYF----I  110

Query  113  LWILSVLALGGIRFTYRLSGDKKEENCTKRRHKNLLIIGAGDAAAMLIKEIKKHTNFNYN  172
             W++ +L +GG R++ R+   +K       + K  LI+G+G ++++LI+++ +      +
Sbjct  111  TWMMHLLLIGGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  173  IIGLIDDDKSK-RGKLIKGIEVLGGRNEIIEVCKNRQIEEIIIAMPSAELHTKREIINIC  231
             + ++DDD +K +  +  G+ V G  ++I E+ K+ +I  IIIA+P+   +  REI ++C
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  232  KNTKCKLKTLPGIYEMIDGNINITKLRDVNIEDLLGREEVKLNTQNISKYIKNKIIMVTG  291
              T+  +  +P I +++ G+I++ KL+ V++EDLLGR+ V L+  +ISK + +K I+VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  292  GGGSIGSELCRQIAKFQPKQLLILDIYENNVYDLEMELNYNY-IDLNKKIIIASIRDGGR  350
            +GGSIGSE+CRQ+ KF P ++++L+  EN++Y+++ EL   Y  +++   IIA ++D  R
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  351  LKDVFRKYTPQVVFHAAAHKHVPLMEGNPQEAVKNNIIGTYEVLKCCDEFKVEKFVQIST  410
            +K V + Y P VV+HAAAHKHVPLME NPQEA+KNN++GT +         V KFV +ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  411  DKAVNPTNVMGATKRFCEIMVQAF-NEVSKTEYVAVRFGNVLGSNGSVIPLFKRQIAHGG  469
            DKAVNP NVMGA+KR  E+++Q+  NE SKT++VAVRFGNVLGS GSVIPLFK+QI  GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  470  PVTVTHPEINRFFMTIPEaaqlviqagaiaaggEIFVLDMGKPVKIVDLARDLITLSGYE  529
            PVTVTHP + R+FMTIPEA++LV+QAGA+A+GGEIFVLDMGKPVKIVDLA++LI LSGY 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  530  PDMDIKIEYTGLRPGEKLYEELLMNEVALTSTEHDKIFIEKPAKIDMNFIEKSIGEF  586
             + DI IE++G+R+GEKL+EELL ++        +KI+  K  KI+ + + + I++F
Sbjct  529  EE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

219) CKR_2815 in NC_011837


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  344 bits (1291),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 249/537 (47%), Positives = 375/537 (70%), Gaps = 15/537 (2%)

Query  54   NKFFNLYNNIWKYASVEELISIVYSVSLSNIIF-IIYSYFVNYKILENRYYRFPYTVHII  112
             ++F+LY+  W YASV ELI IV SV+ S +   II + F +    +  + R+ +    I
Sbjct  59   AQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYF----I  110

Query  113  LWILSVLALGGIRFTYRLSGDKKEENCTKRRHKNLLIIGAGDAAAMLIKEIKKHTNFNYN  172
             W++ +L +GG R++ R+   +K       + K  LI+G+G ++++LI+++ +      +
Sbjct  111  TWMMHLLLIGGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  173  IIGLIDDDKSK-RGKLIKGIEVLGGRNEIIEVCKNRQIEEIIIAMPSAELHTKREIINIC  231
             + ++DDD +K +  +  G+ V G  ++I E+ K+ +I  IIIA+P+   +  REI ++C
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  232  KNTKCKLKTLPGIYEMIDGNINITKLRDVNIEDLLGREEVKLNTQNISKYIKNKIIMVTG  291
              T+  +  +P I +++ G+I++ KL+ V++EDLLGR+ V L+  +ISK + +K I+VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  292  GGGSIGSELCRQIAKFQPKQLLILDIYENNVYDLEMELNYNY-IDLNKKIIIASIRDGGR  350
            +GGSIGSE+CRQ+ KF P ++++L+  EN++Y+++ EL   Y  +++   IIA ++D  R
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  351  LKDVFRKYTPQVVFHAAAHKHVPLMEGNPQEAVKNNIIGTYEVLKCCDEFKVEKFVQIST  410
            +K V + Y P VV+HAAAHKHVPLME NPQEA+KNN++GT +         V KFV +ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  411  DKAVNPTNVMGATKRFCEIMVQAF-NEVSKTEYVAVRFGNVLGSNGSVIPLFKRQIAHGG  469
            DKAVNP NVMGA+KR  E+++Q+  NE SKT++VAVRFGNVLGS GSVIPLFK+QI  GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  470  PVTVTHPEINRFFMTIPEaaqlviqagaiaaggEIFVLDMGKPVKIVDLARDLITLSGYE  529
            PVTVTHP + R+FMTIPEA++LV+QAGA+A+GGEIFVLDMGKPVKIVDLA++LI LSGY 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  530  PDMDIKIEYTGLRPGEKLYEELLMNEVALTSTEHDKIFIEKPAKIDMNFIEKSIGEF  586
             + DI IE++G+R+GEKL+EELL ++        +KI+  K  KI+ + + + I++F
Sbjct  529  EE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

220) RO1_35260 in NC_021012


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  343 bits (1288),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 245/537 (46%), Positives = 375/537 (70%), Gaps = 16/537 (2%)

Query  72   LYSSLWSYAGALEMMYVVSACILDAIVVAALILVRNWGDMFPVPRSFYILYGLFLLVLIM  131
            LY   W YA+  E++ +V +  + + +VA+ I+V    +  P  R ++I   + LL LI 
Sbjct  64   LYHRAWEYASVSELILIVKS--VTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL-LIG  120

Query  132  GCRYSYRGLRAIRNMRRDGTYRRNVLVIGAGEAGNQLIKEINNSRYvkkkvvgvidddkT  191
            G R S R  R    + ++G  ++  L++G+G +G+ LI+++ N+ Y+    V V+DDD  
Sbjct  121  GSRLSWRIYRKT-FISKEGK-KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  192  KIGNYIHGAKVIGDRSCIRDK---VLELHVHEIIIAMPSAYPKQMKGILDICKETGCELK  248
            K    I ++  +  ++CI+D    V  +++  IIIA+P+   ++++ I  +C  T  E+ 
Sbjct  179  KQKMSIASG--VKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  249  RLPGIYQLVNGEVGISKLKDVDVNDLLGREPVMVNLESIMGYVSGKVIMVTGGGGSIGSE  308
            ++P I ++++GE+ ++KLK V+V+DLLGR+PV +++ SI   ++ K I+VTG+GGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  309  LCRQIAGHKPKQLIILDIYENTTYDIQNELKVKF-PDLDLVVLIGSVRNTNRMNWIFETY  367
            +CRQ+    P ++++L+  EN+ Y+I++EL   +  +++++ +I+ V++ +RM+ + ++Y
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  368  HPEIIYHAAAHKHVPLMEESPNEAIKNNVLGTWKIVQAADRYHVKRFVMISTDKAVNPTN  427
             P ++YHAAAHKHVPLME +P+EAIKNNVLGT++  +AA   +V +FVM+STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  428  IMGASKRICEMIIQT-YNKRSETEYVAVRFGNVLGSNGSVIPLFKKQIERGGPVTVTDPN  486
            +MGASKR+ EM+IQ+  N  S T++VAVRFGNVLGS GSVIPLFKKQIE GGPVTVT+P 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  487  IVRYFMTIPEAVSLVLQAGAYAKGGEIFVLDMGEPVKILDLAKNLILLSGHKPDEDIQIV  546
            + RYFMTIPEA  LVLQAGA A GGEIFVLDMG PVKI+DLAKNLI LSG K +EDI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIE  535

Query  547  FTGLRPGEKLYEEMLMDEEGLQDTENNLIHIGKPIELDEEKFLDQLEKLKEYVVTEP  603
            F+G+R+GEKL+EE+L  +E   +   + I  GK   ++ E + +   K+ ++++ E+
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYN---KIDDFLINES  589

221) Trad_0100 in NC_014221


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  343 bits (1289),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 240/545 (45%), Positives = 383/545 (71%), Gaps = 16/545 (2%)

Query  80   TSFFGLYQRSWTKVAFRELGDIVRAVigaaalgslillwlgpsldiPRSVAFLDGLVTLF  139
            + +F+LY+R+W   +  EL  IV++V ++    ++I+  +     + R + F+  ++ L+
Sbjct  59   AQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLL  117

Query  140  LMTGMR-AFARYRHEASLGQHSARRAKSVLVIGAGEAGSLVVREMLRHPEMGLRPVGFLD  198
            L+ G R +   YR   ++    +++ K+ L++G+G +GSL++R+M+  P MG+ PV  +D
Sbjct  118  LIGGSRLSWRIYRK--TFISKEGKK-KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  199  DDRKKVGYRIAT-VPVLGTTQDINKVVRSHDVDEVLIAIPSSDGRVVREIVGRIEGAKAG  257
            DD +K    IA+ V V G  +DI  +V+  ++  ++IAIP+   + +REI    EG++  
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  258  LKYRIIPGVYELLSGQVGISRIREVQIEDLLRRPPVELDTAAISSYLTDRVVMITGAGGS  317
            + +++ P + +++SG++ +++++ V++EDLL R PVELD A+IS  LT++ +++TGAGGS
Sbjct  235  V-FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  318  IGSELVRQICRFRPKELILFGRGENSIYTLERELE---RDWPDIPYHSVIAGVQHIVRLD  374
            IGSE+ RQ+C+F P  ++L+G+GENSIY +++EL    ++  +I   ++IA+VQ+  R+ 
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE--EIEVIPIIADVQDKERMK  350

Query  375  YVFRRYQPEVVFHAAAHKHVPLMELNPEEAVFNNIIGSKNLVTLALKYGVTHFVNISTDK  434
             V + Y+P VV+HAAAHKHVPLME NP+EA+ NN++G++N    A    V+ FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  435  AVNPTSVMGASKRMVERLVQSAALRASPEQTFVSVRFGNVLGSRGSVIPVFKQQILAGGP  494
            AVNP +VMGASKR+ E ++QS     ++   FV+VRFGNVLGSRGSVIP+FK+QI AGGP
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMN-NETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  495  VTVTHPDMTRYFMTIPEASQLVLQAAGQGKNGEIYILDMGEPVRIVDLARDLIKLSGFEP  554
            VTVTHP+MTRYFMTIPEAS+LVLQA++ +  GEI++LDMG PV+IVDLA++LI+LSG+  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  555  DVDIPIAFSGVRPGEKLYEELMTDEERGDATAHEKIFVAKPSPLDQGAL-ERTVQTLQEA  613
            + DI I FSG+R+GEKL+EEL+  +E       EKI+ +K   +++  L ++  + L + 
Sbjct  530  E-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINE  588

Query  614  ALRSD  618
            ++R +
Sbjct  589  SVRDE  593

222) capD in NC_021033


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  343 bits (1288),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 228/537 (43%), Positives = 377/537 (71%), Gaps = 23/537 (4%)

Query  70   WVFASLNDIYRTIQVAAISLISLLTIKAFIFHNSAEIPRSIFV--LYPLLLVFIMGGARF  127
            W +AS++++   ++  + S+++   I + IF + A + R  F+  +  LLL+   GG+R+
Sbjct  69   WEYASVSELILIVKSVTSSIVATGIIVP-IFTQQAPFLRLYFITWMMHLLLI---GGSRL  124

Query  128  VWRAVNEYRKSY-TVHSKAKPVIIVGAGEAGIMLMRELDRS---SVWRVVAllddderkl  183
             WR    YRK++ + ++K KP +IVG+G +G +L+R++  +   ++  V+ + DD +++ 
Sbjct  125  SWRI---YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQK  181

Query  184  glellgrrvvgSTKDLAESLKEYGAKHVIIAIPSAAHEVMQNVTNIALNAGAAVFTVPNL  243
                 G +V G  KD++E +K +  K +IIAIP+ +++ ++++ ++   +   VF +PN+
Sbjct  182  MSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNI  241

Query  244  EDLMSGRVAINAMRPVNIEDLLGRDAVELDTANISELISNKCVLVSGAGGSIGSELCRQI  303
            E++MSG + +N ++ V++EDLLGRD+VELD A+IS  +++K +LV+GAGGSIGSE+CRQ+
Sbjct  242  ENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  304  AKYKPQKLVLVELSEFALYTIEQ----WFSDNCCETQIIPLTADVKNYARMKAIFEQHRP  359
             K+ P++++L+  +E ++Y I+Q     + +   E ++IP+ ADV++  RMK + +  +P
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMKKVMQAYKP  358

Query  360  SLVFHAAAYKHVPLMEVSNAFEAIRNNSFGTYNLAKVSVETGVRRFVLISTDKAVNPTNV  419
             +V+HAAA KHVPLME +   EAI+NN +GT N A  +  + V +FV++STDKAVNP NV
Sbjct  359  YVVYHAAAHKHVPLMEYNPQ-EAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  420  MGATKRLAEKLLERMQTFHGQTTTFNMVRFGNVLGSTGSVIPKFQKQIQKGGPITVTHPE  479
            MGA+KR+AE +++ M+  +   T F  VRFGNVLGS GSVIP F+KQI+ GGP+TVTHP 
Sbjct  418  MGASKRVAEMVIQSMNN-ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  480  INRYFMSIPEAAQLVIQAATMGQGGEVFVLDMGKPVRIVDLAKNMIRLSGFTEDQIAIEY  539
            + RYFM+IPEA++LV+QA++++ GGE+FVLDMGKPV+IVDLAKN+IRLSG+ E++I+IE+
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEF  536

Query  540  TGLRPGEKLYEELMADEETTSATSHGKLRIAKTVPTA-EGLIKRFEEWISESDARTD  595
            +G+R+GEKL+EEL+  +E  +     K+  +K      E L +++++ + +   R +
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDE  593

223) Amico_1715 in NC_014011


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  343 bits (1287),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 232/526 (45%), Positives = 365/526 (70%), Gaps = 22/526 (4%)

Query  60   FNLHRQSWRTVGTRDALALAKST--------VIFALIASSIAFMLGHNYNIPRSIPLIDA  111
            F+L +++W   +  + + + KS         +I ++++   +F+  + Y I + + L+  
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL--RLYFITWMMHLL--  117

Query  112  LVYAVFMGSSRFASRIIFEEIVGRKTGINKKRTLIVGAGDAGTMIAREIFRHPESGLVPV  171
                 ++G+SR++ RI    ++++    +KK TLIVG+G +G+++ R++   P  G+ PV
Sbjct  118  -----LIGGSRLSWRIYRKTFISKEG--KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  172  GFLDDDPSKKETRFL-GLDVFGPIGDLRQVVRGHSIEEVIIAMPSAPGTTVRRIVELAKK  230
              +DDD++K+   +  G+ V G I D+ ++V+  +I  +IIA+P+ +   +R I  L   
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  231  AKVQYRIIPGIYEVISGKVSISLLRPVDVEDLLRREPVRLDIDSIAGYLSSKVVLVTGAG  290
            ++V+   +P I +V+SG + ++ L+ V+VEDLL R+PV LD+ SI+  L+ K +LVTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  291  GSIGSEICRQICHFSPKLLILLGRGENSLFNIEREMKANY-SHIPYVTMVADVRNIHKIE  349
            GSIGSEICRQ+C F+P  ++LLG+GENS+++I++E+ + Y  +I  + ++ADV++ +++ 
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMK  350

Query  350  HIFEQYRPEVVFHAAAHKHVPMMETNPDEAILNNIGGTQNLVKNALRFNTSYFVNISTDK  409
             + + Y+P VV+HAAAHKHVP+ME NP+EAI NN+ GT+N    A   + S FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  410  AVNPTSIMGASKRVAEMVVRKAAIEAKEGQHFISVRFGNVLGSRGSVVPIFREQIRKGGP  469
            AVNP ++MGASKRVAEMV++    E+   + F++VRFGNVLGSRGSV+P+F+ QI  GGP
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTD-FVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  470  ITITHPEMTRYFMTIPEAAQLVLQAGGMNKNGQVFVLDMGEPVKIVDLAKDIIRLSGFEP  529
            +T+THP MTRYFMTIPEA++LVLQAG++   G++FVLDMG PVKIVDLAK++IRLSG+  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  530  EEIEIVYTGVRPGEKLYeelltaeegttatHHKKIYEAKSNDLPAD  575
            E+I I ++G+R+GEKL+EELL  +E        KIY +K + +  +
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

224) BC1001_0685 in NC_015136


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  342 bits (1285),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 232/541 (43%), Positives = 371/541 (69%), Gaps = 18/541 (3%)

Query  63   YGLYRGMWVFASLPDLVRIAKAIGVGALVV-MIASALLQPAPIVPRSVLIVSPMLLFLAM  121
            ++LY+  W +AS+++L+ I K++  + +   +I + + Q AP++   + +++ M+ +L +
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  122  GGSR---AIYRAAKEFYRYGGLVGQGKPVLVLGAGNAGANLVRELKRSGEWRLAGLL--D  176
            GGSR    IYR +     + +  G+ KP L++G+G +G+ L+R++  +    +  +L  D
Sbjct  120  GGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  177  DDPVKQGREI-YGYRVLGSISDLQKITADLKVEHVIIAVPSASVEAHRRIATLCVRAGVR  235
            DD+ KQ   I  G +V G I D+  +   +++  +IIA+P+ S +  R I  LC  + V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  236  AMTLPALTPLTQGQAFLSRVRQIDLEDLLGRDPVMIDTDHVEALLKNRVVMVTGAGGSIG  295
               +P +  +  G+  +++++++++EDLLGRDPV +D   +   L ++ ++VTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  296  SELCRQILRFGPVQLVAFDISEFSIYRLNEELSDKY-PEVSVVPIIGDVKDSLLLDQVMA  354
            SE+CRQ+ +F P +++ ++ +E SIY++++EL + Y  E+ V+PII+DV+D   + +VM 
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  355  RYTPHIVFHAAAYKHVPLMEEVNAWQAVRNNVLGTYRVARAAIRHDVAHFVLISTDKAVN  414
             Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V+ FV++STDKAVN
Sbjct  355  AYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  415  PTNVMGASKRLAEMVCSSLQQQGTRRTQFETVRFGNVLGSAGSVIPKFQEQIARGGPVTV  474
            P NVMGASKR+AEMV  S++++ T +T+F +VRFGNVLGS GSVIP F+ QI  GGPVTV
Sbjct  414  PPNVMGASKRVAEMVIQSMNNE-TSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  475  THPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGKPVRIADLAHDLIRLYGFTEEQI  534
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMGKPV+I DLA +LIRL G+ EE+I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  535  RVVYTGLRPGEKLYEELLADDETTTRTPHPKLRIAKAREVP-DSLIDNLLPWLMQHRVPT  593
             + ++G+R+GEKL+EELL  DE        K+  +K + +  + L +++   L+++ V  
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRD  592

Query  594  D  594
            +
Sbjct  593  E  593

225) Rcas_1360 in NC_009767


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  342 bits (1285),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 241/566 (43%), Positives = 391/566 (70%), Gaps = 17/566 (3%)

Query  11   LIFDVLLVPLAIYVSFVLRLETFDLKTYWVACAHFCLMAVIVTPLIF-RAFGVYRRYWRY  69
            L++D ++V +++++++ + LE F +K Y +    +  + ++++  +F + F++Y+R W Y
Sbjct  14   LFIDSIIVTFSVFLGYYI-LEPF-FKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  70   ASFEEVLLLCSATSLAMGATAILLTLLDIVTPVIATVPRSIPFIVPPIAASLVSIPRLLV  129
            AS  E++L+  + + ++ AT+I++ ++   +P +      + FI   +   L++ +RL  
Sbjct  72   ASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL-----RLYFITWMMHLLLIGGSRL--  124

Query  130  rigaarerrrratdrpaPVLIMGAGDAASIIVREIQRNPRLGMEVVGLLDDDPTKRGLRL  189
                 R       ++  P LI+G+G ++S+++R++   P +GME V ++DDD+ K+ + +
Sbjct  125  SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSI  184

Query  190  -HGVEVLGDRHAIPSLVAQHKVRQVIIAMPGAPGKAVRDIMHICESVGVAVRIVPGMHEL  248
              GV V G    IP LV + +++++IIA+P  + + +R+I  +CE+  V V  +P ++++
Sbjct  185  ASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENV  244

Query  249  IDGTISVSKLRTIQIEDLLRRAPVQTDtaavrglvagrrvlvtggggSIGSELCRQLLRF  308
            + G I V+KL+ +++EDLL R PV+ D A++   ++ + +LVTG+GGSIGSE+CRQ+ +F
Sbjct  245  MSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKF  304

Query  309  GPSHLIVLGHGENSVFEICNELDCLAEAHLDQSPCIVPVIADIRDLERLRSVFAIHAPEL  368
             P ++++LGHGENS+++I +EL  L   +++    ++P+IAD++D ER++ V     P +
Sbjct  305  TPDRIMLLGHGENSIYHIHQELIGLYKEEIE----VIPIIADVQDKERMKKVMQAYKPYV  360

Query  369  VFHAAAHKHVPLMEAHPVEAISNNVVGTRNLLDVALETGVERFVMISSDKAVNPTSVMGA  428
            V+HAAAHKHVPLME +P EAI NNV+GTRN  + A  + V +FVM+S+DKAVNP +VMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  429  TKRIAEMLVLDAARRSGRP-FVAVRFGNVLGSRGSVVLTFKRQIAAGGPVTVTHPEMRRY  487
            +KR+AEM++      +++  FVAVRFGNVLGSRGSV+  FK+QI AGGPVTVTHP M RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  488  FMTIPEAVQLVLQASVLGRTGEIFMLDMGEPVKVVDLARDMIRLSGLEVGRDIDICFTGM  547
            FMTIPEA +LVLQA+ L+  GEIF+LDMG PVK+VDLA+++IRLSG     DI+I F+G+
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGI  539

Query  548  RPGEKLFEELFARGEEYQPTAHSKIF  573
            R+GEKLFEEL+ ++E        KI+
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIY  565

226) capD in NC_021036


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  341 bits (1282),  Expect = 6e-95, Method: Compositional matrix adjust.
 Identities = 236/547 (44%), Positives = 379/547 (70%), Gaps = 16/547 (2%)

Query  56   HFFACRFLRLHRGIWVFATLRDIYRTIQVAGISlltlllYRALVYHESSLIPRSIYI--L  113
            H FA  F   HR+ W +A++ ++   ++    S+++  +  ++  ++++++ R  +I  +
Sbjct  56   HVFAQIFDLYHRA-WEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL-RLYFITWM  113

Query  114  YPLLLVCIMGGARFLWRAVNDRRNFFAPQSNAKPVIIlgagdaglllMRELDRSN--QWK  171
              LLL+   GG+R+ WR    R+ F++ +++ KP +I+G+G +G LL+R++  +      
Sbjct  114  MHLLLI---GGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  172  VVAFLDDDPRKHGLEV-NGRRVIGNTSELAKPLRDYGVKHVIIAMPYAAREVLHKVTTIA  230
             V  +DDD+ K+ + + +G +V G   +++  ++ + +K +IIA+P  +++ L+ +  + 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  231  LAEGAGIYTVPNLEDLMSGRVSINAMRPVNIEDLLGRDTVQLDTNNISELIQNKTILVTG  290
             +    ++ +PN+E++MSG + +N ++ V++EDLLGRD V+LD  +IS  + +KTILVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  291  AGGSIGSELCRQIFKYNPKSIVLVEISEFALYEIHQWFSSK-NTAVRVIPLTADVKNTSR  349
            AGGSIGSE+CRQ+ K+ P  I+L+  +E ++Y+IHQ + +  +  + VIP+ ADV++  R
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  350  MREIISNYKPDIIFHAAAYKHVPLMEVYNAWEAVRNNSFGTYNVAKIAVENGVKNFILIS  409
            M+ ++  YKP +++HAAA KHVPLME YN+ EA++NN +GT N A  A    V +F+++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  410  TDKAVNPTNVMGASKRLAEMLLERMQTFHGDTTTFNMVRFGNVLGSTGSVIPKFKSQIEK  469
            TDKAVNP NVMGASKR+AEM+++ M+  +   T F  VRFGNVLGS GSVIP FK QIE 
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNN-ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  470  GGPVTVTHPEITRYFMSIPEAAQLVIQAASMGRGGEIFVLDMGEPVKIVDLAKNMIKLSG  529
            GGPVTVTHP +TRYFM+IPEA++LV+QA++++ GGEIFVLDMG PVKIVDLAKN+I+LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  530  YSEDEISIEFTGLRPGEKLYEELMADEENTSSTTHGKL-RIARPAPTKEGLIKAFEQWVS  588
            Y E++I+IEF+G+R+GEKL+EEL+  +E  +     K+ R       KE L + +++ + 
Sbjct  527  YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLI  586

Query  589  ESDVRTD  595
            +  VR +
Sbjct  587  NESVRDE  593

227) capD in NC_018108


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  341 bits (1282),  Expect = 6e-95, Method: Compositional matrix adjust.
 Identities = 236/547 (44%), Positives = 379/547 (70%), Gaps = 16/547 (2%)

Query  56   HFFACRFLRLHRGIWVFATLRDIYRTIQVAGISlltlllYRALVYHESSLIPRSIYI--L  113
            H FA  F   HR+ W +A++ ++   ++    S+++  +  ++  ++++++ R  +I  +
Sbjct  56   HVFAQIFDLYHRA-WEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL-RLYFITWM  113

Query  114  YPLLLVCIMGGARFLWRAVNDRRNFFAPQSNAKPVIIlgagdaglllMRELDRSN--QWK  171
              LLL+   GG+R+ WR    R+ F++ +++ KP +I+G+G +G LL+R++  +      
Sbjct  114  MHLLLI---GGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  172  VVAFLDDDPRKHGLEV-NGRRVIGNTSELAKPLRDYGVKHVIIAMPYAAREVLHKVTTIA  230
             V  +DDD+ K+ + + +G +V G   +++  ++ + +K +IIA+P  +++ L+ +  + 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  231  LAEGAGIYTVPNLEDLMSGRVSINAMRPVNIEDLLGRDTVQLDTNNISELIQNKTILVTG  290
             +    ++ +PN+E++MSG + +N ++ V++EDLLGRD V+LD  +IS  + +KTILVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  291  AGGSIGSELCRQIFKYNPKSIVLVEISEFALYEIHQWFSSK-NTAVRVIPLTADVKNTSR  349
            AGGSIGSE+CRQ+ K+ P  I+L+  +E ++Y+IHQ + +  +  + VIP+ ADV++  R
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  350  MREIISNYKPDIIFHAAAYKHVPLMEVYNAWEAVRNNSFGTYNVAKIAVENGVKNFILIS  409
            M+ ++  YKP +++HAAA KHVPLME YN+ EA++NN +GT N A  A    V +F+++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  410  TDKAVNPTNVMGASKRLAEMLLERMQTFHGDTTTFNMVRFGNVLGSTGSVIPKFKSQIEK  469
            TDKAVNP NVMGASKR+AEM+++ M+  +   T F  VRFGNVLGS GSVIP FK QIE 
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNN-ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  470  GGPVTVTHPEITRYFMSIPEAAQLVIQAASMGRGGEIFVLDMGEPVKIVDLAKNMIKLSG  529
            GGPVTVTHP +TRYFM+IPEA++LV+QA++++ GGEIFVLDMG PVKIVDLAKN+I+LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  530  YSEDEISIEFTGLRPGEKLYEELMADEENTSSTTHGKL-RIARPAPTKEGLIKAFEQWVS  588
            Y E++I+IEF+G+R+GEKL+EEL+  +E  +     K+ R       KE L + +++ + 
Sbjct  527  YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLI  586

Query  589  ESDVRTD  595
            +  VR +
Sbjct  587  NESVRDE  593

228) Slip_0161 in NC_014220


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  340 bits (1276),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 248/539 (47%), Positives = 372/539 (70%), Gaps = 33/539 (6%)

Query  57   FKLYRQMWEYASIRELIIIVKAATAGAAGST------------LCTYLIGWTLLPRSVHi  104
            F LY++ WEYAS+ ELI+IVK+ T++  ++             L  Y+I W +       
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMM-------  114

Query  105  iewiitigliglSRMSSRIIRDVgnggssggrsrTLIVGAGDAGMLVARELLSPNSKATL  164
                  + LIG SR+S RI R    +  +  ++ TLIVG+G +G L+ R++++    + +
Sbjct  115  -----HLLLIGGSRLSWRIYRKTFISKEGKKKP-TLIVGGGRGGSLLIRQMMNTPYMG-M  167

Query  165  HPVGFVDDDPGKRGLMF-SGLKVLGDRRDIPRLVERHDVDTILIAMPSVPGRTVREIIDI  223
            +PV  VDDD+ K+ + + SG+KV G  +DIP LV + ++  I+IA+P+++ + +REI  +
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  224  CGQTKASIKVLPGVYELINGrvrvsrirsvsvEDLLRREPVKVDLEGIAGYLKGKVVLVT  283
            C  T+  +  +P + ++++G + V++++ V VEDLL R+PV +D+ +I+  L  K +LVT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  284  GGAGSIGSELCRQVCSFKPAGLIVLDNSENGLFEIELELRKSYPEA-QIVPCLADVKDHA  342
            G++GSIGSE+CRQVC F P  +++L+++EN++++I+ EL   Y E  +++P +ADV+D  
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKE  347

Query  343  KIETVFSRHRPQVVFHAAAYKHVPMMEVNPDEAVKNNVGGTIVVACAAKNYGAEVFIYIS  402
            ++  V    +P VV+HAAA KHVP+ME NP+EA+KNNV GT   A AAK      F+ +S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  403  TDKAVNPTSVMGATKRVGELIVQSMNG-KGKTRFASVRFGNVLGSRGSVVPIFASQIAKG  461
            TDKAVNP +VMGA+KRV+E+++QSMN   +KT F +VRFGNVLGSRGSV+P+F  QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  462  GPVTVTHEDMQRYFMTIPEAVQLVIQAGALAQGGEIFVLDMGEPVKIIDLARDMIRLSGL  521
            GPVTVTH +M RYFMTIPEA +LV+QAGALA GGEIFVLDMG PVKI+DLA+++IRLSG 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  522  RPDVDIKIEITGIRPGEKLCEELLSRKELLDVTRHQRIF---IARENGEEDLEKIGAVL  577
            + + DI IE++GIR+GEKL EELL++ E+      ++I+   + + + EE  +KI+  L
Sbjct  528  KEE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

229) capD2 in NC_014355


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  340 bits (1276),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 230/527 (44%), Positives = 355/527 (68%), Gaps = 10/527 (1%)

Query  65   FRLYGTVWQYTSLWDLGNIVGATLSGSIVFFLVTRYGLGQTAYPRTVYLIDALLLIVLTG  124
            F LY   W+Y+S+ +L  IV +  S+ +   ++      Q+++ R +Y+I  ++ ++L G
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  125  GMRVARRVGYPS---SSNGDMKRVLIYGAGDAGERLVRELRQNKAFGYQPVGFIDDNRRK  181
            G R+++R+ Y     S +G  K  LI G+G +G  L+R++ +    G +PV  +DD+  K
Sbjct  121  GSRLSWRI-YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  182  AGQRI-HGVKVLGTRAQLPGIMERVKPDTILIAMPSIGATATREIAKALLAYNVSIKILP  240
                I  GVKV G   ++P ++ + +   I+IA+P+++    REI K   + NV +  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  241  DLSVLLDGKSEVNQLRNLSVEDLLHRPRVDLDRSLTATLLKGKRVLVTGAGGSIGSELCR  300
            ++  ++ G  EVN+L+++ VEDLL R  V+LD +  +  L  K +LVTGAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  301  QIASYAPECLILFERYENGLYAIHSEL-GPRTAPPHIYPVIGDVTDADRLRSTMEAYQPQ  359
            Q+  ++P+ ++L+ + EN++Y IH EL G      ++ P+I+DV D +R++  M+AY+P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  360  IVFHAAAHKHVPLMEYNPCEAVKNNIIGTRTVAALSEEFGVERFIMISTDKAVRPSSVMG  419
            +V+HAAAHKHVPLMEYNP EA+KNN++GTR  A  +    V +F+M+STDKAV P++VMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  420  ATKRVAELIIQDMAR-TGKTNFITVRFGNVLGSNGSVVPHFLQQIKRGGPVTVTHPDVQR  478
            A+KRVAE++IQ M   T+KT+F++VRFGNVLGS GSV+P F +QI  GGPVTVTHP++ R
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  479  YFMLIPEAVELVLQAASLANPGAVYVLEMGEQVRLQDLARHLIRLSGFVPEQEIPICFTG  538
            YFM IPEA  LVLQA++LA  G ++VL+MG  V++ DLA++LIRLSG+  E++I I F+G
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIGIEFSG  538

Query  539  LRPGEKLAEELVGPDETVMASPLKEILAVRLNQVPPREALLSAIAGL  585
            +R+GEKL EEL+  DE         I   +++++  +E L + I ++
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKI-EKEELYNKIDDF  584

230) TEQUI_1023 in NC_014914


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  340 bits (1276),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 235/547 (43%), Positives = 379/547 (70%), Gaps = 16/547 (2%)

Query  56   HFFACRFLRLHRGIWVFATLRDIYRTIQVAGISlltlllYRALVYHESSLIPRSIYI--L  113
            H FA  F   HR+ W +A++ ++   ++    S+++  +  ++  ++++++ R  +I  +
Sbjct  56   HVFAQIFDLYHRA-WEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL-RLYFITWM  113

Query  114  YPLLLVCIMGGARFLWRAVNDRRNFFAPQSNAKPVIIlgagdaglllMRELDRSN--QWK  171
              LLL+   GG+R+ WR    R+ F++ +++ KP +I+G+G +G LL+R++  +      
Sbjct  114  MHLLLI---GGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  172  VVAFLDDDPRKHGLEV-NGRRVIGNTSELAKPLRDYGVKHVIIAMPYAAREVLHKVTTIA  230
             V  +DDD+ K+ + + +G +V G   +++  ++ + +K +IIA+P  +++ L+ +  + 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  231  LAEGAGIYTVPNLEDLMSGRVSINAMRPVNIEDLLGRDTVQLDTNNISELIQNKTILVTG  290
             +    ++ +PN+E++MSG + +N ++ V++EDLLGRD V+LD  +IS  + +KTILVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  291  AGGSIGSELCRQIFKYNPKSIVLVEISEFALYEIHQWFSSK-NTAVRVIPLTADVKNTSR  349
            AGGSIGSE+CRQ+ K+ P  I+L+  +E ++Y+IHQ + +  +  + VIP+ ADV++  R
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  350  MREIISNYNPDIIFHAAAYKHVPLMEVYNAWEAVRNNSFGTYNVAKIAVENGVKNFILIS  409
            M+ ++  Y+P +++HAAA KHVPLME YN+ EA++NN +GT N A  A    V +F+++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  410  TDKAVNPTNVMGASKRLAEMLLERMQTFHGDTTTFNMVRFGNVLGSTGSVIPKFKSQIEK  469
            TDKAVNP NVMGASKR+AEM+++ M+  +   T F  VRFGNVLGS GSVIP FK QIE 
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNN-ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  470  GGPVTVTHPEITRYFMSIPEAAQLVIQAASMGRGGEIFVLDMGEPVKIVDLAKNMIKLSG  529
            GGPVTVTHP +TRYFM+IPEA++LV+QA++++ GGEIFVLDMG PVKIVDLAKN+I+LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  530  YSEDEISIEFTGLRPGEKLYEELMADEENTSSTTHGKL-RIARPAPTKEGLIKAFEQWVS  588
            Y E++I+IEF+G+R+GEKL+EEL+  +E  +     K+ R       KE L + +++ + 
Sbjct  527  YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLI  586

Query  589  ESDVRTD  595
            +  VR +
Sbjct  587  NESVRDE  593

231) Bphyt_0902 in NC_010681


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  339 bits (1274),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 228/543 (42%), Positives = 369/543 (68%), Gaps = 19/543 (3%)

Query  61   RIFGLYRGMWVFASLPDLMRIAKAVMAGAFTM-MMVAVMAQPHPIIPRSVLA-VSPLLLF  118
            +IF+LY+  W +AS+++L+ I K+V ++  +  ++V++ +Q  P++    ++ +  LLL 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLL-  118

Query  119  LAMGGSR---ALYRASKEFYLYGGLVGQGKPVVVLGAGNAGASLARELSRSSEWRLVGLL  175
              +GGSR    +YR +     + +  G+ KP +++G+G +G+ L R++  ++   +  +L
Sbjct  119  --IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  176  --DDDPAKQGREI-YGYKVWGPISDLQHWASDMKVEHAIIAIPSASVDAQRRVATLCVRA  232
              DDD+ KQ   I  G KV G I D+ +     ++   IIAIP+ S +  R +  LC  +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  233  GVRAMVLPALTTLTQGEAFLSRVRQIDLEDLLGREPVRIDMPHVEALLSGRVVMVTGAGG  292
             V    +P +  +  GE  +++++++++EDLLGR+PV +DM+ +   L+ + ++VTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  293  SIGSELCRQILRFEPAQLIAFDLSEYAMYRLTEELHDRF-PKLSVVPVIGDAKDSLLLDQ  351
            SIGSE+CRQ+ +F P +++ ++ +E ++Y++ +EL + +   + V+P+I+D +D   + +
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  352  VLSRYTPHILFHAAAYKHVPLMEELNAWQAVRNNVLGTYRVARAAIRHDVKHFVLISTDK  411
            V+  Y P +++HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDK
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  412  AVNPTNVMGASKRLAEMACQALQQTSTRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPV  471
            AVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  472  TVTHPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLARDLIRLYGFSEE  531
            TVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+ EE
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  532  HIRIVFTGLRPGEKLYEELLADDEATTRTPHPKL-RIAQAREAPDNLLDELLPWLMQHRV  590
            +I I F+G+R+GEKL+EELL  DE        K+ R    +   ++L + +   L+++ V
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

Query  591  PSD  593
              +
Sbjct  591  RDE  593

232) Halsa_0607 in NC_014654


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  339 bits (1271),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 234/517 (46%), Positives = 368/517 (72%), Gaps = 9/517 (1%)

Query  62   SLYNKMWQYASMSELYSIFKAALA--INFVFVIYLYFFRVAFPRSIIAINLMSNIfllgg  119
             LY++ W+YAS+SEL  I K+  +  +   +++ ++  + +F R  +   +M  +++ G+
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGS  122

Query  120  frfslrllKDFLNRNQNKKSKSRVLiigagdaaeiiiREMHKHPELGKKIVGLVDDDPDK  179
                    K F++++ +KK+    LI+G+G ++ ++IR+M + P +G   V +VDDD++K
Sbjct  123  RLSWRIYRKTFISKEGKKKP---TLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  180  QSLEI-HGYEVLGKTKKIPQLIEEYDVDEVIIAIPSAEGKTIKRLYKLSNKKDVKVKIVP  238
            Q + I  G  V G  K IP+L+  +++  +IIAIP+   + ++ + KL +  +V V  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  239  GVYEILKGDVSLNQIREVKVEDLLRRDQVDLITDEISDYLEEKTILVTGGGGSIGSELCR  298
             + +++ G++ +N+++ V VEDLL RD V+L    IS  L +KTILVTG+GGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  299  QLAKFNPKEIIIFDINENNTYFLERDLEDEY-PDLKITSIIGSIRDKNKLQNLFREFEID  357
            Q+ KF P  I++++  EN+ Y ++++L + Y  ++ + +II+ ++DK++++++ + +   
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  358  VAFHAAAHKHVPLMETSPEEAVKNNILGSRNVAEVAAEFKIDRFVLISTDKAVNPTNVMG  417
            V +HAAAHKHVPLME +P+EA+KNN+LG+RN AE A    + +FV++STDKAVNP NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  418  ASKRAAEMIVQSINK-KSETKFMAVRFGNVLGSQGSVIPLFKKQIANGGPLTVTHKDITR  476
            ASKR AEM++QS+N+  S T F+AVRFGNVLGS+GSVIPLFKKQI  GGP+TVTH ++TR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  477  YFMTIPEASQLVIQAGALGEGGEVFVLDMGEPVKIMELAEDLINLSGLTPYEDIDIDVVG  536
            YFMTIPEAS+LV+QAGAL+ GGE+FVLDMG PVKI++LA +LI LSG    EDI+I+  G
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIEFSG  538

Query  537  LRPGEKLYEELLCNTEDNIATKHQRIFINNLEAVDGE  573
            +R+GEKL+EELL + E +     ++I+  +++ ++ E
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

233) Tbd_1871 in NC_007404


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  338 bits (1270),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 231/504 (46%), Positives = 362/504 (72%), Gaps = 17/504 (3%)

Query  60   FGLYRGIWRFASLPDLKRIvlaaglaallipvalvlFRVHAIVPRSVLI--LDPLLLVMV  117
            F+LY+  W +AS+++L  IV +   + +   + + +F  +A   R  +I  +  LLL+  
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI--  119

Query  118  MGGSRLAYRAWKEHRLASVLRPDSK-PVLVAGAGSAADFLLRELARNP-AGFHVVGLLDD  175
             GGSRL+   W+  R + + + + K P L+ G+G ++ +L+R++   P  G + V ++DD
Sbjct  120  -GGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  176  SREKQG-RLVQGvpvlgvlddaavvaKRLGVDDVVLALPSAAHEIRKRITEACTGAGLNV  234
              +KQ   +  GV V G + D + + K++ +  +++A+P+ +++  + I   C G+ ++V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  235  MTVPSLEDLVGGRVSVSSLRRIELDDLLGRDPVQLDDSGLHGLLTGQVVMVTGAGGSIGA  294
              +P++E++++G + V+ L+++E++DLLGRDPV+LD +++   LT + ++VTGAGGSIG+
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  295  ELCRQIARFAPAKLVLFEQSELALYAMEQEL-PRRHPELAVVPVIGDAKNAAWVNRVMEM  353
            E+CRQ+ +F+P +++L+ ++E ++Y ++QEL      E+ V+P+I+D ++  ++++VM+ 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  354  HRPAIVFHAAAYKHVPLMENGNAWEAVKNNVLGTqvvaaaaqvhgvgKFVLISTDKAVNP  413
             +P +V+HAAA KHVPLME  N+ EA+KNNVLGT+  A AA++  V+KFV++STDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  414  TNVMGASKRLAEMACQAMQQRAGDAPTGTRFVSVRFGNVLGSSGSVIPKFQKQIEAGGPV  473
             NVMGASKR+AEM  Q+M+    +  + T FV+VRFGNVLGS GSVIP F+KQIEAGGPV
Sbjct  415  PNVMGASKRVAEMVIQSMN----NETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  474  TVTHPEITRYFMSIPEAAQLVLQAGLMGKGGEIFVLDMGEPVKIAELAKLMIRLSGADEA  533
            TVTHP +TRYFM+IPEA++LVLQAG ++ GGEIFVLDMG PVKI +LAK +IRLSG  E 
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  534  RIRIEYTGLRPGEKLYEELLADDE  557
             I IE++G+R+GEKL+EELL  DE
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDE  554

234) CLM_3515 in NC_012563


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  338 bits (1269),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 249/525 (48%), Positives = 363/525 (70%), Gaps = 18/525 (3%)

Query  59   FNKIFNLYSSIWKYASVEELMsiiysvsisniifiiysyfinyKILESNYYRFPFTVHII  118
            F +IF+LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F    I
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYF----I  110

Query  119  FWILSIVSLGGTRFIYRVIEDKESNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKEL  178
             W++ ++ +GG+R+  R+      +K     ++K K  LI+G+G +++L+I+++     +
Sbjct  111  TWMMHLLLIGGSRLSWRIYRKTFISK-----EGKKKPTLIVGGGRGGSLLIRQMMNTPYM  165

Query  179  NYNIIGLIDDDIEKLGKRI-NGIPVLGGRESIIRMSKNKKIDEIILAIPSASSATKSEIV  237
              + + ++DDD +K    I +G+ V G    I  + K+ +I  II+AIP+ S     EI 
Sbjct  166  GMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREIN  225

Query  238  SICKETSCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSCINKYIKDKVVL  297
             +C  T+  +  +P++++V+ G ++++KL+ V +EDLLGR+ V LD + I+K + +K +L
Sbjct  226  KLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTIL  285

Query  298  VTGGGGSIGSELCRQIVKFSPKKLLILDIYENNVYDVQMELN--YKYPELDKAVIIASIR  355
            VTG+GGSIGSE+CRQ+ KF+P ++++L+  EN++Y+++ EL   YK  E++   IIA ++
Sbjct  286  VTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQ  344

Query  356  DEKRLKDIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGIERFV  415
            D  R+K +   YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A    + +FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  416  QISTDKAVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQI  474
             +STDKAVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  475  THGGPVTVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITL  534
              GGPVTVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI L
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  535  SGYKPGEDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEK  579
            SGYK  EDI IE++G+R+GEKL+EELL  +        +KI+  K
Sbjct  525  SGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

235) TASI_0395 in NC_016043


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  338 bits (1268),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 227/539 (43%), Positives = 379/539 (71%), Gaps = 21/539 (3%)

Query  2    HRGIWVFASLNDIYRTIQVAAISLISLLTIKAFIFHNSAEIPRSIFV--LYPLLLVIIMG  59
            HR+ W +AS++++   ++  + S+++   I + IF + A + R  F+  +  LLL+   G
Sbjct  66   HRA-WEYASVSELILIVKSVTSSIVATGIIVP-IFTQQAPFLRLYFITWMMHLLLI---G  120

Query  60   GARFAWRAINDRRKHTVHSKAKPVIIVGAGEAGIMLMRELDRS---SVWRVVAllddder  116
            G+R++WR I  +   + ++K KP +IVG+G +G +L+R++  +   ++  V+ + DD ++
Sbjct  121  GSRLSWR-IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  117  klglellgrrvvgSTKDLAQSLKEYGAKHVIIAIPSAAHEVMQNVTNIALNAGAAVFTVP  176
            +      G +V G  KD+++ +K +  K +IIAIP+ +++ ++++ ++   +   VF +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  177  NLEDLMSGRVAINAMRPVNIEDLLGRDAVELDTANISELISNKCVLVSGAGGSIGSELCR  236
            N+E++MSG + +N ++ V++EDLLGRD+VELD A+IS  +++K +LV+GAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  237  QIAKYKPQKLVLVELSEFALYTIEQ----WFSDNCCETQIIPLTADVKNYARMKAIFEQH  292
            Q+ K+ P++++L+  +E ++Y I+Q     + +   E ++IP+ ADV++  RMK + +  
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMKKVMQAY  356

Query  293  RPSLVFHAAAYKHVPLMEVSNAFEAIRNNSFGTYNLAKVSVETGVRRFVLISTDKAVNPT  352
            +P +V+HAAA KHVPLME +   EAI+NN +GT N A  +  + V +FV++STDKAVNP 
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQ-EAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  353  NVMGATKRLAEKLLERMQTFHGQTTTFNMVRFGNVLGSTGSVIPKFQKQIQKGGPITVTH  412
            NVMGA+KR+AE +++ M+  +   T F  VRFGNVLGS GSVIP F+KQI+ GGP+TVTH
Sbjct  416  NVMGASKRVAEMVIQSMNN-ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  413  PDINRYFMSIPEAAQLVIQAATMGQGGEVFVLDMGKPVRIVDLAKNMIRLSGFTEDQIAI  472
            P++ RYFM+IPEA++LV+QA++++ GGE+FVLDMGKPV+IVDLAKN+IRLSG+ E++I+I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  473  EYTGLRPGEKLYEELMADEETTSATSHGKLRIAKTVPTA-EGLIKRFEEWISESDARTD  530
            E++G+R+GEKL+EEL+  +E  +     K+  +K      E L +++++ + +   R +
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDE  593

236) wbpM in NC_007651


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  337 bits (1265),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 228/540 (43%), Positives = 369/540 (69%), Gaps = 19/540 (3%)

Query  85   HVFGLYRGLWVFASLPDLLRISKAVVGGSLIV-MIGAVMLQPVPIIPRSVLVLSP-MLLF  142
            ++F+LY+  W +AS+++L+ I K+V ++ +   +I ++  Q  P++    L +   M+ +
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR---LYFITWMMHL  116

Query  143  LAMGGAR---ALYRATKEFYLYGGLIGQGKPVLILGAGNAGASLARELSRSGEWRLAGLL  199
            L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    +  +L
Sbjct  117  LLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  200  --DDDPAKHGREV-YGYKVLGPISevahwaeaakaeyaiiaiPSASVETQRRVATLCVRA  256
              DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC  +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  257  GVKAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGG  316
             V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  317  SIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLLLDQ  375
            SIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   + +
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  376  VMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDK  435
            VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDK
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  436  AVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPV  495
            AVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  496  TVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTED  555
            TVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+ E+
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  556  HIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTARAREVP-DHLLDELLPWLMQHRV  614
            +I IEFSG+R+GEKL+EELL  DE        K+  ++ + +  ++L + +   L+++ V
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

237) LBF_4128 in NC_010845


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  336 bits (1262),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 230/507 (46%), Positives = 352/507 (70%), Gaps = 27/507 (5%)

Query  61   GIYRSLWSYASLHDLLAIIKATILSSLVSTLALLFYN------RFYQLSRMVPILDTLIL  114
            ++Y+  W YAS+ +L+ I+K+   S + + + + ++       R+Y +++M+ +L    L
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL----L  118

Query  115  LGFLCLRSLSWRMLREQIFSSDRTRKGTPILLVGAGKLGSTFLTEIRRNVDLDYL---PV  171
            +G      LSWR+ R  ++S +  +K  P L+VG+G+ G+++L  IR+ ++  Y+   PV
Sbjct  119  IG---GSRLSWRIYRKTFISKEGKKK--PTLIVGGGR-GGSLL--IRQMMNTPYMGMEPV  170

Query  172  GFLDDNVSK-KGGYIQGIPILGSTDEIGKVLLRYGIKKVIMTVPQPDGRVVSKLMKECEG  230
              +DD+ +K K +   G+ + G   +I  ++ ++ IKK+I+++P    + +  + K CEG
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  231  AGVD-FKILPTFGEYLAEKPNITQLREVQVEDLLGRPTVDLEIESIRSYLEKKVILVTGA  289
            + V+ FK +P + + ++   ++ +L+ V+VEDLLGR  V+L++ SI   L  K ILVTGA
Sbjct  231  TNVEVFK-MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  290  GGSIGSEICRQVALFKPSVLVILDAAETPLYEIDYELRKKFSEFNIDIRPVIADVKNLSR  349
            GGSIGSEICRQV  F P  +++L+ +E ++Y+I+ EL   + E +I++ P+IADV++  R
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKER  348

Query  350  ISAVFEEHRPSVVFHSAAYKHVPMMEINPSEAILNNVMGTKNVADVCRLIGVERFVLIST  409
            +  V +  +P VV+H+AA KHVP+ME NP EAI NNV+GT+N A+  +L  V +FV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  410  DKAVNPVNVMGASKRAAEIYLQHIS-QNSRIKFITVRFGNVLGSNGSVIPRFREQIKRGG  468
            DKAVNP NVMGASKR AE+ +Q ++ + S+  F++VRFGNVLGS GSVIP F+ QI  GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  469  PVTVTHPEVIRYFMTIPEATQLVLQAGSMGEHGEIFLLDMGEPVRILSLAEEMIRLSGYT  528
            PVTVTHP + RYFMTIPEA++LVLQAG+++  GEIF+LDMG PV+I+ LA ++IRLSGY 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  529  PYKDINIEFSGLRPGEKLYEELLLNAE  555
               DI IEFSG+R+GEKL+EELL + E
Sbjct  529  E-EDIGIEFSGIRSGEKLFEELLNKDE  554

238) NH44784_023811 in NC_021285


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  336 bits (1262),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 234/535 (44%), Positives = 366/535 (69%), Gaps = 15/535 (2%)

Query  61   GLYRGMWVFASLPDLKRVLKavtvsssalivvvaLDRAEPTIPRSMMVLYPV---LLLLI  117
            +LY+  W +AS+++L  ++K+VT S  A  ++V++   ++ + R    LY +   + LL+
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR----LYFITWMMHLLL  118

Query  118  MGGGRAAWRMWKEHRLYGRLASQGKPvvvvgagtggaMLVRELERTA--DWHVVALVDDD  175
            +GG+R +WR+ +  + +    ++ KP ++VG+G GG++L+R++  T+  + + V +VDDD
Sbjct  119  IGGSRLSWRIYR--KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  176  SKKWGLEL-SGRRIVGPISELPNILGDHRASHVILAMTSATPAMRREIADLAVKAGAQVF  234
            S+K  + + SG ++ G I ++P+++       +I+A+ + +    REI  L   +  +VF
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  235  IVPGLEELMSGQVAINAMRPVVIDDLLGRDVVRIDTEHVQAMLQGKTVLVTGAGGSIGSE  294
             +P +E++MSG++ +N ++ V ++DLLGRD V +D   +   L  KT+LVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  295  LCRQLARFSPARLVLVEANEFALYNV-EQWFHQHWPQLELVLLAGDVKDAARMEEVFQGW  353
            +CRQ+ +F+P R++L+   E ++Y++ ++ +     ++E++ + +DV+D  RM  V Q+ 
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  354  RPDVVFHAAAYKHVPLMEVANAWQAARNNVLGTLRVAECAVRYGASRFVLISTDKAVNPT  413
            +P VV+HAAA KHVPLME  N+ +A +NNVLGT   AE A     S+FV++STDKAVNP 
Sbjct  357  KPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  414  NVMGATKRMAEMVCESLYRRHQTTQFSMVRFGNVLGSTGSVIPKFQAQIARGGPVTVTHP  473
            NVMGA+KR+AEMV +S+      T+F  VRFGNVLGS GSVIP F+ QI  GGPVTVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  474  EINRYFMSIPEAAQLVLQAASMGAGGEIFVLDMGHPVKIVDLARNMIRLSGYSEAQIRIE  533
             + RYFM+IPEA++LVLQA+++++GGEIFVLDMG PVKIVDLA+N+IRLSGY E +I IE
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIE  535

Query  534  FTGLRPGEKLYEELLADAEQTIETPHEKLRIARSRPV-MDTFLADVTKWLTQSVV  587
            F+G+R+GEKL+EELL   E   E   EK+  ++ + +  + +   +   L +  V
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

239) BRPE64_ACDS21790 in NC_021287


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  336 bits (1262),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 221/514 (43%), Positives = 361/514 (71%), Gaps = 17/514 (3%)

Query  63   RVFGLYRGMWVFASLPDLMRISKSIVVGALVV-MIGAVMSQPAPVIPRSVLIVSPLLLFL  121
            ++F+LY+  W +AS+++L+ I KS+  + +   +I ++ +Q AP +   + +++ ++ +L
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLL  117

Query  122  AMGGAR---ALYRAGKEFYLYGGLVGQGKPVIVLGAGTAGAMLARELSRSSEWRLVGLL-  177
             +GG+R    +YR       + +  G+ KP +++G+G +G++L R++  ++   +  +L 
Sbjct  118  LIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  178  -DDDPAKQGREVL-GHKVLGSFGDLSRIAEQLKTDYVIIAIPSASVEEQRRVATLCVRAG  235
             DDD+ KQ   +  G KV G + D++ +  +++   +IIAIP+ S +  R +  LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  236  VKVMVLPALSQLTAGEGGFLSRVRQIDLEDLLGREPVKIDMPHVERLLHGRVVMVTGAGG  295
            V V  +P + ++ +GE   +++++++++EDLLGR+PV +DM+ + + L  + ++VTGAGG
Sbjct  233  VEVFKMPNIENVMSGEIE-VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  296  SIGSELCRQILRFSPAQLIAYDLSEYAMYRLIEELHEKF-PECSVIPVVGDAKDSLLLDQ  354
            SIGSE+CRQ+ +F+P +++  + +E ++Y++ +EL   +  E  VIP+++D +D   + +
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  355  TMVRFRPHIVFHAAAYKHVPLMEEQNAWQAVRNNVLGTLRVARAAIRHDVRHFVLISTDK  414
             M  ++P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDK
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  415  AVNPTNVMGASKRLAEMACQALQQSAPHTQFETVRFGNVLGSAGSVIPKFQQQISKGGPV  474
            AVNP NVMGASKR+AEM  Q++++ ++ T+F +VRFGNVLGS GSVIP F++QI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  475  TVTHPEITRFFMTIPEAAQLVLQASSMGRGGEIFILDMGQPVKIVDLARDLIRLYGYSEE  534
            TVTHP +TR+FMTIPEA++LVLQA++++ GGEIF+LDMG+PVKIVDLA++LIRL GY EE
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  535  QIRITFTGLRPGEKLYEELLADDETTTRTPHPKL  568
            +I I F+G+R+GEKL+EELL  DE        K+
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKI  564

240) Dsui_0400 in NC_016616


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  336 bits (1262),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 230/543 (43%), Positives = 368/543 (68%), Gaps = 24/543 (4%)

Query  65   PVYVPLFWLSGLYRGIWRYASLMDLRRIIvsvglgglvtavavFMTGMPGVPRSVLVLHP  124
             V+  +F   +LY+  W YAS+ +L   I+ V         + ++  +     + L L  
Sbjct  56   HVFAQIF---DLYHRAWEYASVSEL---ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYF  109

Query  125  I---LLILAMGGGRFLYRAWKDRCLYGHLALSGES----VLILGAGEVGERLIRELQRSP  177
            I   + +L +GG+R+   +W+   +Y    +S E+     LI+G+G  G  LIR++  +P
Sbjct  110  ITWMMHLLLIGGSRL---SWR---IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP  163

Query  178  QWRVAGLL--DNDPAKHGREV-HGVKIRGDIASMVHWAKELEVGHVIVAMPSVSAAVRRG  234
               +  +L  D+D+ K+   +  GVK++G I  + +  K +++  +I+A+P++S    R 
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  235  AMEQAVQAGLKVLTVPALDDLLSGRVSLSQIRQVELEDILGREPVQLDDAGLSRLIAERT  294
                   + + V+ +P +++++SG + ++++++VE+ED+LGR+PV+LD A++S+ ++++T
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  295  ILVTGAGGSIGSELARQIARFAPRQLVLFEVSEFALYQIEQEFRRTF-PGLDVVCVVGDV  353
            ILVTGAGGSIGSE+ RQ+ +F+P +++L+  +E ++Y+I+QE+   +   ++V+ +++DV
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADV  343

Query  354  KDEARLQQVFAAYRPALVFHAAAYKHVPLMESANAWEAVRNNVLGTWRVAMAARQAGVEK  413
            +D  R+++V  AY+P +V+HAAA KHVPLME  N+ EA++NNVLGT+  A AA+ A V K
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  414  MVLISTDKAVNPTNVMGTTKRMAERVVQSLEQAGGGTQFIVVRFGNVLGSNGSVIPTFRE  473
             V++STDKAVNP NVMG++KR+AE V+QS+++  + T+F+ VRFGNVLGS GSVIP F+ 
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  474  QIARGGPVTVTHPDIIRYFMLIPEAAQLVLQAGLMGNGGEIFVLDMGEPVKIVDLARDLI  533
            QI  GGPVTVTHP++ RYFM IPEA++LVLQAG ++ GGEIFVLDMG PVKIVDLA++LI
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  534  RLSGFTEEEIPIEFTGLRPGEKLYEELLADNEMTLPTPHAKLRVAKAESAPEEAWIGDLA  593
            RLSG+ EE+I IEF+G+R+GEKL+EELL  +E+       K+  +K +    E     + 
Sbjct  523  RLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

Query  594  RWL  596
              L
Sbjct  583  DFL  585

241) MYA_0782 in NC_017920


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  336 bits (1262),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 224/541 (42%), Positives = 372/541 (69%), Gaps = 15/541 (2%)

Query  61   HVFGLYRGLWVFASLPDLMRISKAVIGGGLIVMIGAVMFQPSPIIPRSVLLVSPLMLFLV  120
            ++F+LY+  W +AS+++L+ I K+V ++ +   I   +F   + + R + +++ +M +L+
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLL  118

Query  121  MGGAR---ALYRATKEFYLYGGLVGQGKPILVLGAGTAGASLARELSRSGEWRLVGLL--  175
            +GG+R    +YR T     + +  G+ KP L++G+G +G+ L R++  +    +  +L  
Sbjct  119  IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  176  DDDPTKRGREI-YGYKVLGSFNDLKHWTDALKVEYAIIAIPSASVETQRRVATLCVRAGI  234
            DDD+ K+   I  G KV G ++D+ +    +++   IIAIP+ S +  R +  LC  + +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  235  KAMVLPSLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSI  294
                +P++  +M+G+  +++++++++EDLLGRD+V +D + +   L  + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  295  GSELCRQILRFKPAQLVAFDLSEYAMYRLTEELRERFPDQ-HVVPIIGDAKDSLLLDQVM  353
            GSE+CRQ+ +F P +++ ++ +E ++Y++ +EL   + ++ +V+PII+D +D   + +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  354  SRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARSAIRHDVRHFVLISTDKAV  413
              Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A +A   +V  FV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTNVMGASKRLAEMACQALQQTSEGTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTV  473
            NP NVMGASKR+AEM  Q++++ +  T+F +VRFGNVLGS GSVIP F++QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLARDLIRLYGFSEGQI  533
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+ E +I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  534  RIEFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVP-DHLLDELLPWLMQHRVLN  592
             IEF+G+R+GEKL+EELL  DE        K+  ++ + +  ++L + +   L+++ V +
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRD  592

Query  593  D  593
            +
Sbjct  593  E  593

242) capD in NC_010843


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  336 bits (1260),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 230/507 (46%), Positives = 352/507 (70%), Gaps = 27/507 (5%)

Query  92   GIYRSLWSYASLHDLLAIIKATILSSLVSTLALLFYN------RFYQLSRMVPILDTLIL  145
            ++Y+  W YAS+ +L+ I+K+   S + + + + ++       R+Y +++M+ +L    L
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL----L  118

Query  146  LGFLCLRSLSWRMLREQIFSSDRTRKGTPILLVGAGKLGSTFLTEIRRNVDLDYL---PV  202
            +G      LSWR+ R  ++S +  +K  P L+VG+G+ G+++L  IR+ ++  Y+   PV
Sbjct  119  IG---GSRLSWRIYRKTFISKEGKKK--PTLIVGGGR-GGSLL--IRQMMNTPYMGMEPV  170

Query  203  GFLDDNVSK-KGGYIQGIPILGSTDEIGKVLLRYGIKKVIMTVPQPDGRVVSKLMKECEG  261
              +DD+ +K K +   G+ + G   +I  ++ ++ IKK+I+++P    + +  + K CEG
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  262  AGVD-FKILPTFGEYLAEKPNITQLREVQVEDLLGRPTVDLEIESIRSYLEKKVILVTGA  320
            + V+ FK +P + + ++   ++ +L+ V+VEDLLGR  V+L++ SI   L  K ILVTGA
Sbjct  231  TNVEVFK-MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  321  GGSIGSEICRQVALFKPSVLVILDAAETPLYEIDYELRKKFSEFNIDIRPVIADVKNLSR  380
            GGSIGSEICRQV  F P  +++L+ +E ++Y+I+ EL   + E +I++ P+IADV++  R
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKER  348

Query  381  ISAVFEEHRPSVVFHSAAYKHVPMMEINPSEAILNNVMGTKNVADVCRLIGVERFVLIST  440
            +  V +  +P VV+H+AA KHVP+ME NP EAI NNV+GT+N A+  +L  V +FV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  441  DKAVNPVNVMGASKRAAEIYLQHIS-QNSRIKFITVRFGNVLGSNGSVIPRFREQIKRGG  499
            DKAVNP NVMGASKR AE+ +Q ++ + S+  F++VRFGNVLGS GSVIP F+ QI  GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  500  PVTVTHPEVIRYFMTIPEATQLVLQAGSMGEHGEIFLLDMGEPVRILSLAEEMIRLSGYT  559
            PVTVTHP + RYFMTIPEA++LVLQAG+++  GEIF+LDMG PV+I+ LA ++IRLSGY 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  560  PYKDINIEFSGLRPGEKLYEELLLNAE  586
               DI IEFSG+R+GEKL+EELL + E
Sbjct  529  E-EDIGIEFSGIRSGEKLFEELLNKDE  554

243) Apre_1272 in NC_013171


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  336 bits (1262),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 255/626 (41%), Positives = 403/626 (65%), Gaps = 48/626 (7%)

Query  12   LILGFFDILIINLAYFLALYFRFDMNFRAIPLDFLDAFKTYAIFNTILTIAIYGLHKMYN  71
            ++L F+D +I+ ++ FL+ Y+ ++  F++ +++ L       +++  +   I++L   Y+
Sbjct  11   MMLLFIDSIIVTFSVFLG-YYILEPFFKGYSINVLILSSLILLISHHVFAQIFDL---YH  66

Query  72   MILEYASYKELINITQAVILSLISHAVLMTIFVYRMP-ISYYIFGFMIQYVLTVASRFIK  130
               EYAS  ELI I ++V  S+++ ++++ IF  + P +  Y++  M++ +L  +SR+  
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  131  KMMIHKSY--KTDKKNQSYKRALIVGAGSAGQTLKRDISNSNNGGKTNILVVGFIDDDPK  188
            + + +K++  K +KK    K +LIVG+G +G  L R++ N+   G   +LVV+  DD  K
Sbjct  127  R-IYRKTFISKEGKK----KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD--DDSNK  179

Query  189  KKNQYIDNSRIFGGRDMIKEIVEEEAIDVILVAIPSVEEVEKREILRICNETGCEVKVLP  248
            +K       ++ G    I E+V    I  I++AIP++ +   REI ++C+ T  EV  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  249  GIYQLVSGKVTMSTMKDIQIEDLLGRDPVKIFSNETFDYLNDKVVLVTGGGGSIGSELCR  308
             I +++SG + ++ +K +++EDLLGRDPV +        L +K +LVTG+GGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  309  QIAQYGPRLLIIFDIYENNAYEIEQELKRNNK-DLNFITLIGSVRDYKRVEKVFKTYKPD  367
            Q+ ++ P  +++++  EN+ Y+I+QEL    K +++ I +I+ V+D  R+ KV ++YKP 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  368  IVFHAAAHKHVPLMEVSPVEAIKNNVRGTYNVALLSLIYDVQRFVLISTDKAVNPTSVMG  427
            +V+HAAAHKHVPLME +P EAIKNNV GT N A  + + +V +FV++STDKAVNP +VMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  428  ATKRVCEKIIQGINDIRDSKEYNNLAKVIVQDGDRNITINPEDLLEGKNPGTEFVAVRFG  487
            A+KRV E +IQ++N+                                  + T+FVAVRFG
Sbjct  420  ASKRVAEMVIQSMNN--------------------------------ETSKTDFVAVRFG  447

Query  488  NVLGSNGSVIPLFKKQIAAGGPVTVTHPEIIRYFMTIKEAVKLVLQAGSMAQGGEIFVLD  547
            NVLGS GSVIPLFKKQI AGGPVTVTHP + RYFMTI EA +LVLQAG++A GGEIFVLD
Sbjct  448  NVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLD  507

Query  548  MGEPVKIDDLARQLIRLSGYQPDIDMPVVYTGLRPGEKLYEERLMDEEALTDTHIEGISV  607
            MG PVKI DLA++LIRLSGY+ + D+ + ++G+R+GEKL+EE L  +E   +   E I  
Sbjct  508  MGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYR  566

Query  608  GRPLDFSRGEFFGKLDKVINQENIDE  633
            G+   + + E++ K+D  + +E++ +
Sbjct  567  GKVQKIEKEELYNKIDDFLINESVRD  592

244) EUR_25350 in NC_021010


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  335 bits (1259),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 243/539 (46%), Positives = 364/539 (68%), Gaps = 11/539 (2%)

Query  95   IFRLYHSIWRFASINEFMHIIGAFLVLTVVSVIIHEVYEIKMPY-AFWIIGLMLSFALCT  153
            IF LYH  W +AS++E++ I+ +     V + II  ++  + P+  + +I  M+ + L  
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  154  ACRFAYRFIRTGQKMLEQRGSANGDERVMIIGAGNAGRMLIRELIMSSHLHTKACCIIDD  213
            + R++ R+ R   K +  + + +     +I+G+G +G +LIR+++ ++ +   +  ++DD
Sbjct  121  GSRLSWRIYR---KTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  214  NPAKLG-RFIDGVPIVGNRNDIPEMVEKYDITKIVYAVPSTSGKDRKDILNICKDTGCDV  272
            ++ K    +  GV + G  +DIPE+V K++I KI+ A+P+ S +  ++I ++C +T  +V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  273  SVVPGIYQMVDGRVSVSNLRPVSIEDLLGRDPVVVDNDGIHSFLQGKVVMVTGGGGSIGS  332
              +P I +++ G + V++L+ V +EDLLGRDPV +D  +I   L  K ++VTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  333  ELCRQIAREDPKLLIIFDIYENNAYDIQQELKRKY-PYVRVETLIGSVRNTNRLHYVFQT  391
            E+CRQ+ +  P  +++++  EN+ Y+I+QEL   Y   + V  +I+ V++ +R+  V Q+
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  392  YHPEIIYHAAAHKHVPLMEESPNEAIKNNVLGTLKLSRIAAEYHVKKFVLISTDKAVNPT  451
            Y P ++YHAAAHKHVPLME +P+EAIKNNVLGT + +  A   +V KFV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  452  NIMGASKRLCEMVIQMMNRQTE-TDFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTDK  510
            N+MGASKR+ EMVIQ MN +T  TDFVAVRFGNVLGS GSVIPLFKKQIE GGPVTVT+ 
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  511  RIIRYFMTIPEAVALVLQAGLYAHGGEIFVLDMGEPVKIDDMARNLIRLSGLEPDVDIQI  570
             + RYFMTIPEA  LVLQAG  A GGEIFVLDMG PVKI D+A+NLIRLSG   + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  571  VYTGLRPGEKLYEEMLMSEEGLKETPNKLIHVGEPIEMD-DELFEKQLEMLEKACTSEA  628
             ++G+R+GEKL+EE+L  +E   E     I  G    ++ +EL++K  + L +    + 
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDE  593

245) Bphy_2289 in NC_010622


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  335 bits (1258),  Expect = 5e-93, Method: Compositional matrix adjust.
 Identities = 222/539 (42%), Positives = 374/539 (70%), Gaps = 17/539 (3%)

Query  61   RIFGLYRGMWVFASLPDLMRISKAVATGAL-LAMILAVMIQPVPIIPRsvllvsplllfl  119
            +IF+LY+  W +AS+++L+ I K+V+++ +  ++I+++  Q  P++   + +++ ++ +L
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLL  117

Query  120  AMGGSR---ALYRAAKEFYLYGGLVAQGKPVVVIGAGTAGAMLARELSRSSEWRLIGLL-  175
             +GGSR    +YR +     + +  ++ KP +++G+G +G++L R++  ++   +  +L 
Sbjct  118  LIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  -DDDVSKQGREI-YGYKVLGPISKLPEIAEAMKTEYAIIAIPSAPVEQQRRAATLCVRAG  233
             DDD +KQ   I  G KV G I  +PE+    +    IIAIP+ + ++ R    LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  VRAMVLPALTDMTEGQASMSRVRHIDLEDLLGREPVHIDTPHVEALLHARVVMVTGAGGS  293
            V    +P + ++  G+  +++++ +++EDLLGR+PV++D + +   L  + ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQILRFKPAQLIAFDISEYAMYRLVEELLERF-PGLSIVPVIGDAKDSLLLDQV  352
            IGSE+CRQ+ +F P +++ ++ +E ++Y++ +EL+  +   + ++P+I+D +D   + +V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  353  MARFTPHIVYHAAAYKHVPLMEEQNAWQAVRNNVLGTYRVARAAIRHDVKRFVLISTDKA  412
            M  + P +VYHAAA KHVPLME  N+ +A++NNVLGT   A AA   +V +FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPTNVMGASKRLAEMACQALQQTSERTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVT  472
            VNP NVMGASKR+AEM  Q++++ + +T+F +VRFGNVLGS GSVIP F++QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  VTHPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPMKIVDLARDLIRLYGFTEEQ  532
            VTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG P+KIVDLA++LIRL G+ EE+
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IRIEFTGLRPGEKLYEELLADEETTTRTPHPKLRIAQARGVP-DNLLDELLPWLMQHRV  590
            I IEF+G+R+GEKL+EELL  +E        K+  ++ + +  ++L + +   L+++ V
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

246) ERE_08710 in NC_021044


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  335 bits (1256),  Expect = 7e-93, Method: Compositional matrix adjust.
 Identities = 242/526 (47%), Positives = 360/526 (69%), Gaps = 11/526 (2%)

Query  95   IFRLYHSIWRFASINEFMHIIGAFLVLTVVSVIIHEVYEIKMPY-AFWIIGLMLSFALCT  153
            IF LYH  W +AS++E++ I+ +     V + II  ++  + P+  + +I  M+ + L  
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  154  ACRFAYRFIRTGQKMLEQRGSANGDERVMIIGAGNAGRMLIRELIMSSHLHTKACCIIDD  213
            + R++ R+ R   K +  + + +     +I+G+G +G +LIR+++ ++ +   +  ++DD
Sbjct  121  GSRLSWRIYR---KTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  214  NPAKLG-RFIDGVPIVGNRNDIPEMVEKYDITKIVYAVPSTSGKDRKDILNICKDTGCDV  272
            ++ K    +  GV + G  +DIPE+V K++I KI+ A+P+ S +  ++I ++C +T  +V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  273  SVVPGIYQMVDGRVSVSNLRPVSIEDLLGRDPVVVDNDGIHSFLQGKVVMVTGGGGSIGS  332
              +P I +++ G + V++L+ V +EDLLGRDPV +D  +I   L  K ++VTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  333  ELCRQIAREDPKLLIIFDIYENNAYDIQQELKRKY-PYVRVETLIGSVRNTNRLHYVFQT  391
            E+CRQ+ +  P  +++++  EN+ Y+I+QEL   Y   + V  +I+ V++ +R+  V Q+
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  392  YHPEIIYHAAAHKHVPLMEESPNEAIKNNVLGTLKLSRIAAEYHVKKFVLISTDKAVNPT  451
            Y P ++YHAAAHKHVPLME +P+EAIKNNVLGT + +  A   +V KFV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  452  NIMGASKRLCEMVIQMMNRQTE-TDFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTDK  510
            N+MGASKR+ EMVIQ MN +T  TDFVAVRFGNVLGS GSVIPLFKKQIE GGPVTVT+ 
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  511  RIIRYFMTIPEAVALVLQAGLYAHGGEIFVLDMGEPVKIDDMARNLIRLSGLEPDVDIQI  570
             + RYFMTIPEA  LVLQAG  A GGEIFVLDMG PVKI D+A+NLIRLSG   + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  571  VYTGLRPGEKLYEEMLMSEEGLKETPNKLIHVGEPIEMD-DELFEK  615
             ++G+R+GEKL+EE+L  +E   E     I  G    ++ +EL++K
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNK  580

247) Npun_F1367 in NC_010628


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  335 bits (1256),  Expect = 7e-93, Method: Compositional matrix adjust.
 Identities = 231/502 (47%), Positives = 348/502 (70%), Gaps = 27/502 (5%)

Query  82   FSFYSRYWRYASIEDLIHITMLFLFAVIIQEFLFYVLHTILHFSIEKLPKSLPLIDGLLS  141
            F +Y R W YAS+ +LI I      +++   ++  ++     F        L +I  ++ 
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL------RLYFITWMMH  115

Query  142  LALIGGLRFSVRAVEITSHKQTVLNSQER---VLIVGAGSAGVSLVQEMQINPQLGFYPV  198
            L LIGG R+S R       ++T ++ + +    LIVG+G +G  L+++M   P +G  PV
Sbjct  116  LLLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  199  AFIDDDPQKLNVNI-RGIPVLGDRNYITDVVKYQQIHKVIIAMPSVAGQVIREIVDICKA  257
              +DDD++K +++I  G+ V G  + I ++VK  +I K+IIA+P+++ Q +REI  +C +
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  258  NGIQTSTLPGIHEILNGPVRIDSIRDVRIEDLLRREPVQTDIEVVAQFIEGKKVLITGAG  317
              ++   +P I+++++G + ++ ++ V +EDLL R+PV+ D+  +++ +  K +L+TGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  318  GSIGSELCRQICQCRPAEIMLLGHGENSVFNIQQELEKIVEAMKENGEAQKYTPYISSLI  377
            GSIGSE+CRQ+C+  P  IMLLGHGENS+++I+QEL   +   KE+ E       + ++I
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL---IGLYKEEIE-------VIPII  340

Query  378  ADIRFEERLNHVFEQFQPHVIFHAAAHKHVPLMELNSPEAITNNVIGTKNLLEMALRYDV  437
            AD++  ER++ V + ++P V++HAAAHKHVPLME N+ EAI NNV+GT+N  E A   +V
Sbjct  341  ADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEV  400

Query  438  LHFVMISTDKAVNPTNVMGASKRVAEMLVLQAARQSGKP-YVAVRFGNVLGSRGSVVPTF  496
              FVM+STDKAVNP NVMGASKRVAEM++     +++K  +VAVRFGNVLGSRGSV+P F
Sbjct  401  SKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLF  460

Query  497  KKQIAAGGPVRVTHPDICRYFMTIPEAVQLVLQAAVLGRSGEVLMMNMGKPVKIVDLAKE  556
            KKQI AGGPV VTHP++ RYFMTIPEA +LVLQA+ L+ +GE+++++MGKPVKIVDLAK+
Sbjct  461  KKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKN  520

Query  557  LIRLSGYEVNKDIEIIFTGLRP  578
            LIRLSGY  + DI I F+G+R+
Sbjct  521  LIRLSGYK-EEDIGIEFSGIRS  541

248) CDBI1_13495 in NC_017179


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  334 bits (1252),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 258/584 (45%), Positives = 403/584 (70%), Gaps = 19/584 (3%)

Query  23   RHLTLLILDICSVLVAFRMSLS---LTGNLNAFTTNDIIISVCIYIVLHIVSFRLFKCYN  79
            R + LL++D  S++V+F + L+   L   +++++ N +I+S  I ++ H V  ++F  Y+
Sbjct  9    RFMMLLFID--SIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  80   TLWRYAGEEEIISIFVATLAYLIPIYIINKLLGFDYPIM-FYVLNTIFIIMFTSGARIAY  138
              W YA+  E+I I  +  + +++  II  ++  + P++ +Y +  +  +++ +G+R++ 
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  139  RAIRIVMNKTY--SRGKVSNILIIGAGDAGEMVIQELKRNSELkkvavaiidddkdkiG-  195
            R  R    KT+    GK    LI+G+G +G ++I+++   + +   +V ++DDD +K   
Sbjct  127  RIYR----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  196  RIIHNVKIVGTTSDIKAVVEKYNVDEIIFSIANiekrrkkeiiDICKNTNCKIKTIPGIY  255
             I   VK+ G   DI  +V K+N+  II++I+ + ++R +EI  +C  TN  +  +P I 
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  256  EIIDGKVDIKQIREVEIEDLLGREPIKTNLREISNYIEGKVILitggggsigsELCRQIA  315
            +++ G +++++++ VE+EDLLGR+P+  ++  IS+ +  K IL+TG+GGSIGSE+CRQ+ 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  316  GFNPKELIIVDNYENNAYSIQQELLRKYKNKLDLKTVIASIREEKRMDEIFNKYKPEVVF  375
             F P  ++++++ EN+ Y I+QEL+  YK+ +++  +IA +++  RM  + + YKP VV+
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  376  HAAAHKHVPLMESSPGEAIKNNIFGTLNIAGLSSKYRAKKFVLISTDKAVNPTNIMGATK  435
            HAAAHKHVPLME +P EAIKNN++GT N A  +      KFV++STDKAVNP N+MGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  436  RAAEMIIQTMNAE-SQTEFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTHPDIIRYFM  494
            R AEM+IQ+MN E S+T+FVAVRFGNVLGS GSVIPLFKKQIE GGPVTVTHP++ RYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  495  TIPEAVGLVIQAGAMAKGGEIFVLDMGEPVRILDLAKNLIKFSGFEPDVDIKIEFSGLRP  554
            TIPEA  LV+QAGA+A GGEIFVLDMG PV+I+DLAKNLI++SG+  + DI IEFSG+R+
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRS  541

Query  555  GEKLYEELLMSEEGLLDTEHKKIFIGRPIDVDRE----KITKYL  594
            GEKL+EELL  +E   +    KI+ G+   +++E    KI  +L
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

249) CD196_2610 in NC_013315


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  334 bits (1252),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 258/584 (45%), Positives = 403/584 (70%), Gaps = 19/584 (3%)

Query  23   RHLTLLILDICSVLVAFRMSLS---LTGNLNAFTTNDIIISVCIYIVLHIVSFRLFKCYN  79
            R + LL++D  S++V+F + L+   L   +++++ N +I+S  I ++ H V  ++F  Y+
Sbjct  9    RFMMLLFID--SIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  80   TLWRYAGEEEIISIFVATLAYLIPIYIINKLLGFDYPIM-FYVLNTIFIIMFTSGARIAY  138
              W YA+  E+I I  +  + +++  II  ++  + P++ +Y +  +  +++ +G+R++ 
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  139  RAIRIVMNKTY--SRGKVSNILIIGAGDAGEMVIQELKRNSELkkvavaiidddkdkiG-  195
            R  R    KT+    GK    LI+G+G +G ++I+++   + +   +V ++DDD +K   
Sbjct  127  RIYR----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  196  RIIHNVKIVGTTSDIKAVVEKYNVDEIIFSIANiekrrkkeiiDICKNTNCKIKTIPGIY  255
             I   VK+ G   DI  +V K+N+  II++I+ + ++R +EI  +C  TN  +  +P I 
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  256  EIIDGKVDIKQIREVEIEDLLGREPIKTNLREISNYIEGKVILitggggsigsELCRQIA  315
            +++ G +++++++ VE+EDLLGR+P+  ++  IS+ +  K IL+TG+GGSIGSE+CRQ+ 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  316  GFNPKELIIVDNYENNAYSIQQELLRKYKNKLDLKTVIASIREEKRMDEIFNKYKPEVVF  375
             F P  ++++++ EN+ Y I+QEL+  YK+ +++  +IA +++  RM  + + YKP VV+
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  376  HAAAHKHVPLMESSPGEAIKNNIFGTLNIAGLSSKYRAKKFVLISTDKAVNPTNIMGATK  435
            HAAAHKHVPLME +P EAIKNN++GT N A  +      KFV++STDKAVNP N+MGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  436  RAAEMIIQTMNAE-SQTEFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTHPDIIRYFM  494
            R AEM+IQ+MN E S+T+FVAVRFGNVLGS GSVIPLFKKQIE GGPVTVTHP++ RYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  495  TIPEAVGLVIQAGAMAKGGEIFVLDMGEPVRILDLAKNLIKFSGFEPDVDIKIEFSGLRP  554
            TIPEA  LV+QAGA+A GGEIFVLDMG PV+I+DLAKNLI++SG+  + DI IEFSG+R+
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRS  541

Query  555  GEKLYEELLMSEEGLLDTEHKKIFIGRPIDVDRE----KITKYL  594
            GEKL+EELL  +E   +    KI+ G+   +++E    KI  +L
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

250) CDR20291_2657 in NC_013316


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  334 bits (1252),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 258/584 (45%), Positives = 403/584 (70%), Gaps = 19/584 (3%)

Query  23   RHLTLLILDICSVLVAFRMSLS---LTGNLNAFTTNDIIISVCIYIVLHIVSFRLFKCYN  79
            R + LL++D  S++V+F + L+   L   +++++ N +I+S  I ++ H V  ++F  Y+
Sbjct  9    RFMMLLFID--SIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYH  66

Query  80   TLWRYAGEEEIISIFVATLAYLIPIYIINKLLGFDYPIM-FYVLNTIFIIMFTSGARIAY  138
              W YA+  E+I I  +  + +++  II  ++  + P++ +Y +  +  +++ +G+R++ 
Sbjct  67   RAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  139  RAIRIVMNKTY--SRGKVSNILIIGAGDAGEMVIQELKRNSELkkvavaiidddkdkiG-  195
            R  R    KT+    GK    LI+G+G +G ++I+++   + +   +V ++DDD +K   
Sbjct  127  RIYR----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  196  RIIHNVKIVGTTSDIKAVVEKYNVDEIIFSIANiekrrkkeiiDICKNTNCKIKTIPGIY  255
             I   VK+ G   DI  +V K+N+  II++I+ + ++R +EI  +C  TN  +  +P I 
Sbjct  183  SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  256  EIIDGKVDIKQIREVEIEDLLGREPIKTNLREISNYIEGKVILitggggsigsELCRQIA  315
            +++ G +++++++ VE+EDLLGR+P+  ++  IS+ +  K IL+TG+GGSIGSE+CRQ+ 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  316  GFNPKELIIVDNYENNAYSIQQELLRKYKNKLDLKTVIASIREEKRMDEIFNKYKPEVVF  375
             F P  ++++++ EN+ Y I+QEL+  YK+ +++  +IA +++  RM  + + YKP VV+
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  376  HAAAHKHVPLMESSPGEAIKNNIFGTLNIAGLSSKYRAKKFVLISTDKAVNPTNIMGATK  435
            HAAAHKHVPLME +P EAIKNN++GT N A  +      KFV++STDKAVNP N+MGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  436  RAAEMIIQTMNAE-SQTEFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTHPDIIRYFM  494
            R AEM+IQ+MN E S+T+FVAVRFGNVLGS GSVIPLFKKQIE GGPVTVTHP++ RYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  495  TIPEAVGLVIQAGAMAKGGEIFVLDMGEPVRILDLAKNLIKFSGFEPDVDIKIEFSGLRP  554
            TIPEA  LV+QAGA+A GGEIFVLDMG PV+I+DLAKNLI++SG+  + DI IEFSG+R+
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRS  541

Query  555  GEKLYEELLMSEEGLLDTEHKKIFIGRPIDVDRE----KITKYL  594
            GEKL+EELL  +E   +    KI+ G+   +++E    KI  +L
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

251) EUBREC_2619 in NC_012781


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  333 bits (1250),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 242/539 (45%), Positives = 363/539 (68%), Gaps = 11/539 (2%)

Query  140  IFRLYHSIWRFASINEFMHIIGAFLVLAVVSVTIHEVYEIKMPY-AFWIIGLMLSFALCT  198
            IF LYH  W +AS++E++ I+ +     V +  I  ++  + P+  + +I  M+ + L  
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  199  ACRFAYRFIRTGQKMLEQRGSANGDEKVMIIGAGNAGRMLIRELIMSSHLHTKACCIIDD  258
            + R++ R+ R  +  + + G  +     +I+G+G +G +LIR+++ ++ +   +  ++DD
Sbjct  121  GSRLSWRIYR--KTFISKEGKKKP---TLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  259  NPAKLG-RFIDGVPIVGNRNDIPEMVEKYDITKIVYAVPSTSGKDRKDILNICKDTGCDV  317
            ++ K    +  GV + G  +DIPE+V K++I KI+ A+P+ S +  ++I ++C +T  +V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  318  SVVPGIYQMVDGRVSVSNLRPVSIEDLLGRDPVVVDNDGIHSFLQGKVVMVTGGGGSIGS  377
              +P I +++ G + V++L+ V +EDLLGRDPV +D  +I   L  K ++VTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  378  ELCRQIAREDPKLLIIFDIYENNAYDIQQELKRKY-PYVRVETLIGSVRNTNRLHYVFQT  436
            E+CRQ+ +  P  +++++  EN+ Y+I+QEL   Y   + V  +I+ V++ +R+  V Q+
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  437  YHPEIIYHAAAHKHVPLMEESPNEAIKNNVLGTLKLSRIAAEYHVKKFVLISTDKAVNPT  496
            Y P ++YHAAAHKHVPLME +P+EAIKNNVLGT + +  A   +V KFV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  497  NIMGASKRLCEMVIQMMNRQTE-TDFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTDK  555
            N+MGASKR+ EMVIQ MN +T  TDFVAVRFGNVLGS GSVIPLFKKQIE GGPVTVT+ 
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  556  RIIRYFMTIPEAVALVLQAGLYAHGGEIFVLDMGEPVKIDDMARNLIRLSGLEPDVDIQI  615
             + RYFMTIPEA  LVLQAG  A GGEIFVLDMG PVKI D+A+NLIRLSG   + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  616  VYTGLRPGEKLYEEMLMSEEGLKETPNKLIHVGEPIEMD-DELFEKQLEMLEKACTSEA  673
             ++G+R+GEKL+EE+L  +E   E     I  G    ++ +EL++K  + L +    + 
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDE  593

252) Bmul_2504 in NC_010084


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  333 bits (1250),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 229/538 (43%), Positives = 369/538 (69%), Gaps = 15/538 (2%)

Query  61   HIFGLYRGLWVFASLPDLMRISKavgggavivmigavmFQPMPIIPRSVLLVSPLMLFLA  120
            +IF+LY+  W +AS+++L+ I K+V ++ V   I   +F   + + R + +++ +M +L 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLL  118

Query  121  MGGAR---ALYRATKEFYLYGGLVGQGKPVLVLGAGTAGANLARELSRSGEWRLVGLL--  175
            +GG+R    +YR T     + +  G+ KP L++G+G +G+ L R++  +    +  +L  
Sbjct  119  IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  176  DDDVTKQGREI-YGYKVLGSFNDLKLWTDATKVEYAIIAIPSASVETQRRVATLCVRAGV  234
            DDD  KQ   I  G KV G ++D+       ++   IIAIP+ S +  R +  LC  + V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  235  KAMVLPSLTALMPGQGFLSQVRNIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSI  294
                +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  295  GSELCRQILRFAPAQLVAFDLSEYAMYRLVEELRERFPDQ-PVVPIIGDAKDSLLLDQVM  353
            GSE+CRQ+ +F+P +++ ++ +E ++Y++ +EL   + ++  V+PII+D +D   + +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  354  SRYAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAV  413
              Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTNVMGASKRLAEMACQALQQTSDRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTV  473
            NP NVMGASKR+AEM  Q++++ + +T+F +VRFGNVLGS GSVIP F++QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPEITRFFMTIPEASQLVLQASSMGRGGEIFILDMGQPVKIVDLARDLIRLYGFSEEQI  533
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG+PVKIVDLA++LIRL G+ EE+I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  534  RIEFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVP-DHLLDELLPWLMQHRV  590
             IEF+G+R+GEKL+EELL  DE        K+  ++ + +  ++L + +   L+++ V
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

253) BMULJ_00732 in NC_010804


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  333 bits (1250),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 229/538 (43%), Positives = 369/538 (69%), Gaps = 15/538 (2%)

Query  61   HIFGLYRGLWVFASLPDLMRISKavgggavivmigavmFQPMPIIPRSVLLVSPLMLFLA  120
            +IF+LY+  W +AS+++L+ I K+V ++ V   I   +F   + + R + +++ +M +L 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLL  118

Query  121  MGGAR---ALYRATKEFYLYGGLVGQGKPVLVLGAGTAGANLARELSRSGEWRLVGLL--  175
            +GG+R    +YR T     + +  G+ KP L++G+G +G+ L R++  +    +  +L  
Sbjct  119  IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  176  DDDVTKQGREI-YGYKVLGSFNDLKLWTDATKVEYAIIAIPSASVETQRRVATLCVRAGV  234
            DDD  KQ   I  G KV G ++D+       ++   IIAIP+ S +  R +  LC  + V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  235  KAMVLPSLTALMPGQGFLSQVRNIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSI  294
                +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  295  GSELCRQILRFAPAQLVAFDLSEYAMYRLVEELRERFPDQ-PVVPIIGDAKDSLLLDQVM  353
            GSE+CRQ+ +F+P +++ ++ +E ++Y++ +EL   + ++  V+PII+D +D   + +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  354  SRYAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAV  413
              Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTNVMGASKRLAEMACQALQQTSDRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTV  473
            NP NVMGASKR+AEM  Q++++ + +T+F +VRFGNVLGS GSVIP F++QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPEITRFFMTIPEASQLVLQASSMGRGGEIFILDMGQPVKIVDLARDLIRLYGFSEEQI  533
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG+PVKIVDLA++LIRL G+ EE+I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  534  RIEFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVP-DHLLDELLPWLMQHRV  590
             IEF+G+R+GEKL+EELL  DE        K+  ++ + +  ++L + +   L+++ V
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

254) CBF_3157 in NC_017297


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  332 bits (1246),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 247/535 (47%), Positives = 366/535 (69%), Gaps = 18/535 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKILESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F      W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYFIT----WMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKELNYNIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +  + + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LIDDDTEKLGKRI-NGIPVLGGRESIIRMSKNKKIDEIILAIPSASSATRSEIVSICKET  243
            ++DDD++K    I +G+ V G    I  + K+ +I  II+AIP+ S     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNISKLRDVSIEDLLGRDEVKLDDRGINKYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGRD V LD  +I+K + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNVYDVQMELN--YKYPELDKAVIIASIRDEKRLR  361
            SIGSE+CRQ+ KF+P ++++L+  EN++Y+++ EL   YK  E++   IIA ++D  R++
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  DIFSSYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGTERFVQISTDK  421
             +  +YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A      +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQIAHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPG  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK  
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEF  595
            EDI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

255) CLI_3168 in NC_009699


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  332 bits (1246),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 247/535 (47%), Positives = 366/535 (69%), Gaps = 18/535 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKILESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F      W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYFIT----WMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKELNYNIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +  + + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LIDDDTEKLGKRI-NGIPVLGGRESIIRMSKNKKIDEIILAIPSASSATRSEIVSICKET  243
            ++DDD++K    I +G+ V G    I  + K+ +I  II+AIP+ S     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNISKLRDVSIEDLLGRDEVKLDDRGINKYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGRD V LD  +I+K + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNVYDVQMELN--YKYPELDKAVIIASIRDEKRLR  361
            SIGSE+CRQ+ KF+P ++++L+  EN++Y+++ EL   YK  E++   IIA ++D  R++
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  DIFSSYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGTERFVQISTDK  421
             +  +YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A      +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQIAHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPG  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK  
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEF  595
            EDI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

256) Deipe_0919 in NC_019793


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  332 bits (1245),  Expect = 5e-92, Method: Compositional matrix adjust.
 Identities = 215/451 (48%), Positives = 330/451 (74%), Gaps = 10/451 (2%)

Query  132  EGAQK-VLIVGAGEAGIMIAREMLRHPEAGLVPVAFVDDRLDKQRRTFV-GLPVLGTVDM  189
            EG +K  LIVG+G +G ++ R+M+  P  G+ PV  VDD  +KQ+ ++  G+ V G +  
Sbjct  137  EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKD  196

Query  190  LADVVQRCKADEVLIAVPSAAGQFVRRVVDLARTAGVRYRIMPGMFEILSGQVDIAQIRN  249
            ++++V++ +   ++IA+P+ + Q +R +  L   + V    MP + +++SG++++ ++++
Sbjct  197  IPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKK  256

Query  250  VNVEDLLRRDPVQLDTESIAGYLREQVVLVTGAGGSIGSEIVRQIARFVPRKIVLLGRGE  309
            V+VEDLL RDPV+LD  SI+  L ++ +LVTGAGGSIGSEI RQ+ +F P +I+LLG+GE
Sbjct  257  VEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGE  316

Query  310  NSVFSIQQELL---RDWPEVQCVALIGDVRDATRLRAIFQEQRPSVVFHAAAHKHVPLME  366
            NS++ I+QEL+   ++  E++ +++I+DV+D  R++ + Q  +P VV+HAAAHKHVPLME
Sbjct  317  NSIYHIHQELIGLYKE--EIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLME  374

Query  367  DSPSEAILNNIVGTRNIAELCLEFQVARLVNISTDKAVNPTSVMGATKRIAEMVISTAAQ  426
             +P EAI NN++GTRN AE     +V+++V +STDKAVNP +VMGA+KR+AEMVI +  +
Sbjct  375  YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNN  434

Query  427  RARPEQSFVSVRFGNVLGSRGSVIPTFLTQIRAGGPVTVTHPEMRRYFMTIPEAARLVLQ  486
             + +   FV+VRFGNVLGSRGSVIP F  QI AGGPVTVTHP M RYFMTIPEA+RLVLQ
Sbjct  435  ET-SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQ  493

Query  487  AGGLAQNGNVYVLDMGEPVKIADLAQDVIRLSGAR--NIEVVFTGVRPGEKLYEELLTTG  544
            AG+LA  G+++VLDMG PVKI DLA+++IRLSG +  +I + F+G+R+GEKL+EELL  +
Sbjct  494  AGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKD  553

Query  545  ENVGATSHRDIFVAQLERLDPSYVTARVREL  575
            E         I+ +++++++   +  ++ ++
Sbjct  554  EIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

257) BTI_934 in NC_021173


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  332 bits (1245),  Expect = 5e-92, Method: Compositional matrix adjust.
 Identities = 231/539 (43%), Positives = 372/539 (70%), Gaps = 17/539 (3%)

Query  61   HVFGLYRGLWVFASLPDLMRISKALagggiivmigavmF-QPVPIIPRSVlllsplllfl  119
            ++F+LY+  W +AS+++L+ I K+++++ +   I   +F Q  P++   + +++ ++ +L
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLL  117

Query  120  IMGGAR---ALYRATKEFYLYGGLVGEGKPLLVLGAGTAGANLARELSRSGEWRLVGLL-  175
            ++GG+R    +YR T     + +  G  KP L++G+G +G+ L R++  +    +  +L 
Sbjct  118  LIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  -DDDIAKQGREI-YGYKVLGSINDLPHWTETMKIEYAIIAIPSASVEAQRRVATLCVRAG  233
             DDD  KQ   I  G KV G I+D+P+     +I   IIAIP+ S +  R +  LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  VKAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGS  293
            V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLLLDQV  352
            IGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   + +V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  353  MSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVKHFVLISTDKA  412
            M  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVT  472
            VNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  VTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTEDH  532
            VTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+ E++
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQHRV  590
            I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L+++ V
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

258) capD2 in NC_012108


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  332 bits (1244),  Expect = 6e-92, Method: Compositional matrix adjust.
 Identities = 212/526 (41%), Positives = 357/526 (68%), Gaps = 27/526 (5%)

Query  66   FNMYRGMWRYTSGSDVVNVIKAsilsslliMALVLFVKNFGGFSRSVFAIDLCLTIFLLS  125
            F++Y+  W Y+S S+++ ++K+   S +    +V +  + + F R ++ I   + ++L++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  126  GFRLCVKKYFEISAGNRFSMLTTIGTIIKDIFFRENGATK-LLIIGAGSCGERIVREIIK  184
            G RL  + Y                   +  F+  +G  K  LI+G+G  G  ++R++++
Sbjct  121  GSRLSWRIY-------------------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMN  161

Query  185  NSMLKYKVVGFLDDNPKKIGKTI-HGITVLNVIDSLEKVAKKVEATEVLIAIPTAEAFHM  243
             + +    V  +DD+++K   +I  G+ V   I  +  + KK +   ++IAIPT    ++
Sbjct  162  TPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRL  221

Query  244  RRIIDICKDSGLK-FKIIPDMGELINGNVSVSAIRDLSFRDLLGREPVRLDQGRIGEYLE  302
            R I  +C ++ +  FK+ P++ ++++G++ V+ ++ +   DLLGR+PV LD + I+  L 
Sbjct  222  REINKLCEGTNVEVFKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELT  280

Query  303  NQVILITGAGGSIGSELCRQICRFNPATLVLYDNAETPLYEIDHELKNYFKQ-VNIVPVL  361
            ++ IL+TGAGGSIGSE+CRQ+C+F P  ++L +++E ++Y+I++EL   +K+ ++++P++
Sbjct  281  HKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPII  340

Query  362  GDIRDRFQFSKALEAYSPVSVFHAAAYKHVPMLEIHPWEAVLNNIMGTVNVAECCKRLNV  421
            +D++D+ +  K ++AY P  V+HAAA KHVP++E +P EA+ NN++GT N AE  K  +V
Sbjct  341  ADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEV  400

Query  422  QRFVLMSTDKAVRPSSVMGASKRISEIFVQNQSTSFDHQTKFMIVRFGNVAGSAGSVVPL  481
             +FV++STDKAV P++VMGASKR++E+ +Q+ +     +T F+ VRFGNV GS GSV+PL
Sbjct  401  SKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNE-TSKTDFVAVRFGNVLGSRGSVIPL  459

Query  482  FKKQIRSGGPVTVTHPDVTRFFMTIPEACQLILQAGAMGKGGEIFILDMGRPVKIADMAA  541
            FKKQI +GGPVTVTHP++TR+FMTIPEA +L+LQAGA++ GGEIF+LDMG+PVKI D+A 
Sbjct  460  FKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAK  519

Query  542  DMIRLSGYQPGKDIAIKYIGLRPGEKMFEELVAENEVTLPTEHDKI  587
            ++IRLSGY+   DI+I + G+R+GEK+FEEL+  +E+      +KI
Sbjct  520  NLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKI  564

259) Bxe_A3780 in NC_007951


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  332 bits (1244),  Expect = 7e-92, Method: Compositional matrix adjust.
 Identities = 226/539 (42%), Positives = 371/539 (69%), Gaps = 17/539 (3%)

Query  61   RIFGLYRGMWVFASLPDLVRISKAVIAGAL-VAMVVSVLVQPMPIvprsvlvvsplflfl  119
            +IF+LY+  W +AS+++L+ I K+V ++ +  +++V+++ Q  P++    +     +L+ 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLL-  118

Query  120  AMGGSR---ALYRATKEFYLYGGLVAQGKPVVVLGAGNAGASLARELSRSSEWRLVGLL-  175
             +GGSR    +YR T     + +  ++ KP +++G+G +G+ L R++  ++   +  +L 
Sbjct  119  -IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  -DDDVSKHGREI-YGYKVFGSISELPQLAETLKTEYAIIAIPSATVDVQRRVATLCVRAG  233
             DDD +K+   I  G KV G I ++P+L   ++    IIAIP+ + +  R +  LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  VRALVLPALTDVTQGQAFLSRVRQIDLEDLLGRDPINIDTPHVEALLHDRVVMVTGAGGS  293
            V  + +P + +V  G+  +++++++++EDLLGRDP+++D + +   L ++ ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQILRFQPAQLIAYDLSEFAIYRLTEELSERF-PGVSVIPVIGDAKDSLLLDEV  352
            IGSE+CRQ+ +F P +++  + +E +IY++ +EL   +   + VIP+I+D +D   +  V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  353  MSRHTPHIVFHAAAYKHVPLMEEQNAWQAVRNNVLGTYRVGRAAIRHDVKHFVLISTDKA  412
            M    P +V+HAAA KHVPLME  N+ +A++NNVLGT   + AA   +V  FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPTNVMGASKRLAEMACQALQQTSPRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVT  472
            VNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  VTHPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLARDLIRLYGFNEEQ  532
            VTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G++EE+
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IRIVFTGLRPGEKLYEELLACDETTTRTPHPKLRTARAREV-SDDLLDKLLPWLMQHRV  590
            I I F+G+R+GEKL+EELL  DE        K+  ++ + +  ++L +K+   L+++ V
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

260) Ctha_2155 in NC_011026


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  331 bits (1241),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 249/616 (41%), Positives = 416/616 (68%), Gaps = 38/616 (6%)

Query  3    KYKIPLFKHAIDSAIIFLSTFIAYTLRLEPIQADYFFPALVVSIITFPIKTGIG----F-  57
            ++ + LF   IDS I+ +S F++Y + LEP     FF +  ++++ ++    +     F 
Sbjct  9    RFMMLLF---IDSIIVTFSVFLGYYI-LEP-----FFKGYSINVLILSSLILLISHHVFA  59

Query  58   -LFGLYRQSWHNVGVKDLSAIIKFAAGYTLISLVIRALLSELI-FWPISIAFIEAMILIF  115
             +F+LY+++W+  +V +L  I+K  ++  + + +I +++++   F  + + FI  M+ ++
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPF--LRLYFITWMMHLL  117

Query  116  GLSLIRLTRRVVYSQRKKALIKSKDKVQKRVLVIGAGEAGTFIVREMQRHPESGLLPIGF  175
             ++  RL++R+ Y   +K++I SK+  +K  L++G+G +G++++R+M   P  G+ P+  
Sbjct  118  LIGGSRLSWRI-Y---RKTFI-SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  LDDDVIKQKQNFL-GLPVFGALYDLKQVVDAEDIDQVLIAIPSVTGDVITKVVHDAQEAS  234
            +DDD  KQK ++  G+ V G + D+ ++V   +I +++IAIP+++ + +  +    + ++
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  235  VQYRTIPGFHELLSGQASMSQIREVDVQDLLRRKPVQLDLALIAHYLKDQIVLVSGAGGS  294
            V+   +P +++++SG+  +++++ V+V+DLL R PV+LD+A I+  L ++ +LV+GAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  295  IGSEIVRQVVRFNPRKLILVGRGENSLYLISEELQKNF-HGLNFLCKVIDVRDRNSLEHL  353
            IGSEI RQV +F P +++L+G+GENS+Y I +EL   + + ++ +  + DV+D++ +  +
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  354  FSREQPNVVFHAAAHKHVPLMELAPEQAVLNNVGGTKNLVELALKYKVSCFVNISTDKAV  413
                +P VV+HAAAHKHVPLME  P++A+ NNV GT+N  E A    VS FV +STDKAV
Sbjct  353  MQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTSVMGATKRVAEYTVELASRQAQSNQRFVSVRFGNVLGSRGSVIPKFKQQILSGGPVT  473
            NP +VMGA+KRVAE  ++  + ++   + FV+VRFGNVLGSRGSVIP FK+QI +GGPVT
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTD-FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  474  VTHPEMVRFFMTIPEASQLVLQAGGIGQNGEVYVLDMGEPVKIVDMATELIKLSGLVPNK  533
            VTHP M R+FMTIPEAS+LVLQAG+++  GE++VLDMG PVKIVD+A +LI+LSG   + 
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEE  530

Query  534  DIRIEFTGIRPGEKLYEELLTSEEGTNSTHHEKIYVAKKGSMDSEVF----ENYL-----  584
            DI IEF+GIR+GEKL+EELL  +E       EKIY +K   ++ E +    +++L     
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

Query  585  --ESLFFAASSGNGED  598
              E +FF  ++  GE+
Sbjct  591  RDEIIFFVNNNKTGEE  606

261) ebA1630 in NC_006513


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  330 bits (1239),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 203/440 (47%), Positives = 322/440 (74%), Gaps = 7/440 (1%)

Query  121  IMGGGRAAYRVFKEHREFGALRGVGKPVLVLGAGREAMNLIQELRRSR--EWHVVGLLDD  178
            ++GG+R + R+++  + F +  G  KP L++G+GR +  LI+++  +     + V ++DD
Sbjct  118  LIGGSRLSWRIYR--KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  179  DPLKRHREV-CGVRVLGAVGEIAECADALHVRHAIIAMPGANAERHRHVANLCVRAGVRV  237
            D+ K+   +  GV+V G + +I+E    ++++  IIA+P  + +R R++ +LC  + V V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FILPAIEQLIAGHDTLSQMRSLDLEDLLGREPVEIDTPQVREMLAGRVAMVTGAGGSIGA  297
            F +P IE++++G+  +++++ +++EDLLGR+PVE+D + +   L+ +  +VTGAGGSIG+
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  298  ELCRQIARFGPAQIIAFELNEFALYTLSEEFAEEF-PEIGLVAIAGDVKDRRRVMEILER  356
            E+CRQ+ +F P +I+ +   E ++Y + +E+   +  EI +++I +DV+D+ R+  +++ 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  357  HAPAVVFHAAAYKHVPLMEEHNAWQAVRNNVLGTWILAQASAALGVERFVLVSTDKAVNP  416
              P VV+HAAA KHVPLME  N+ +A++NNVLGT+  A+A+    V +FV+VSTDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  TNVMGASKRLAEIICQEMQRQSRRTRFEMVRFGNVLGSAGSVIPKFQAQIERGGPVTVTH  476
             NVMGASKR+AE++ Q M+ ++ +T F  VRFGNVLGS GSVIP F+ QIE GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PEITRYFMAIHEAAQLVLQAAAMGEGGEIFVLDMGQPVKVLDLARDMIRLSGKSEREVPI  536
            P +TRYFM+I EA++LVLQA+A++ GGEIFVLDMG+PVK++DLA+++IRLSG  E ++ I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  537  VFTGLRPGEKLFEEVLAHSE  556
             F+G+R+GEKLFEE+L   E
Sbjct  535  EFSGIRSGEKLFEELLNKDE  554

262) Dole_1009 in NC_009943


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  329 bits (1236),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 229/520 (45%), Positives = 357/520 (69%), Gaps = 30/520 (5%)

Query  63   FDLYRGMWRYTSLSDLFNIVKAALITNLVIVGGLL--FFNRFQGFPRSVFLIDALLTILT  120
            FDLY+  W Y+S+S+L+ IVK+  +T+ ++  G++  +F +   F R +++I  ++ +L 
Sbjct  62   FDLYHRAWEYASVSELILIVKS--VTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLL  118

Query  121  VSGFRILIRIYFEHAAGDKMSQVVKKAFSQVFSKTDGHTRRVIILGAGDCGEKIYREIAH  180
            ++G R+  RIY                  + F   +G  +  +I+G+G  G  + R++ +
Sbjct  119  IGGSRLSWRIY-----------------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMN  161

Query  181  NPSLGFQVVGFLDDNPVKVGKKI-HGLPVLGEIAGVSKFVARLSIDELIIAIPTATPEQM  239
             P +G + V  +DD++ K    I  G+ V G I +++ +V +++I  +IIAIPT + +++
Sbjct  162  TPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRL  221

Query  240  RTIVALCEKSGIPYKTVPGFSELLNGTPSVAALRKVAYRDLLGREVVRLDKEGIGAYLAG  299
            R I  LCE + +    +P + ++++G   V  L+KV   DLLGR+ V LD  +I+  L+ 
Sbjct  222  REINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTH  281

Query  300  KTVLVTGAGGSIGSELCRQILEFSPGRIVLFDRSETALYEIDLELKGQRRDTGLRISPVL  359
            KT+LVTGAGGSIGSE+CRQ+  F+P+RI+L++++E ++Y+I+ EL G  ++  + + P++
Sbjct  282  KTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE-EIEVIPII  340

Query  360  GDIQDQRQLEHLFQLTAPHVVFHAAAYKHVPMLEAHPWKAVKNNIIGTRNLVELSKRFAV  419
            +D+QD+ ++  + Q   P VV+HAAA KHVP++E +P  A+KNN++GTRN  E +K   V
Sbjct  341  ADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEV  400

Query  420  ERFVLVSTDKAVRPANVMGASKRVAELLLQCGNGGAPCTTQFMIVRFGNVLGSAGSVIPL  479
             +FV+VSTDKAV P+NVMGASKRVAE+++Q  N  ++  T+F+ VRFGNVLGS GSVIPL
Sbjct  401  SKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS-KTDFVAVRFGNVLGSRGSVIPL  459

Query  480  FQKQIGKGGPVTVTHPEVTRFFMTVSEACQLILQAGAIGNTGRGRAEVFVLKMGTPVKIV  539
            F+KQI  GGPVTVTHP +TR+FMT++EA +L+LQAGA++  G    E+FVL MG PVKIV
Sbjct  460  FKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG----EIFVLDMGKPVKIV  515

Query  540  DMARDLIRLSGLEPDKDISIEFVGLRPGEKLYEELIVEGE  579
            D+A++LIRLSG   + DI+IEF G+R+GEKL+EEL+  +E
Sbjct  516  DLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDE  554

263) BC1003_0777 in NC_014539


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  329 bits (1235),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 230/543 (43%), Positives = 374/543 (69%), Gaps = 18/543 (3%)

Query  61   RIFGLYRGMWVFASLPDLVRISKAVIAGAL-VAMVVSVLVQpspivprsvlvvsplflfl  119
            +IF+LY+  W +AS+++L+ I K+V ++ +  +++V+++ Q +P++    +     +L+ 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLL-  118

Query  120  AMGGSR---ALYRATKEFYLYGGLVAQGKPVVVLGAGNAGASLARELSRSSEWRLVGLL-  175
             +GGSR    +YR T     + +  ++ KP +++G+G +G+ L R++  ++   +  +L 
Sbjct  119  -IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  -DDDVSKHGREI-YGYKVLGSISELPRMAEELKTEYAIIAIPSASVDVQRRVATLCVRAG  233
             DDD +K+   I  G KV G I ++P +   ++    IIAIP+ S +  R +  LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  VRALVLPALTDVSQGQAFLSRVRQIDLEDLLGRDPVMIDTDHVEALLKNRVVMVTGAGGS  293
            V  + +P + +V  G+  +++++++++EDLLGRDPV +D   +   L ++ ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQILRFGPVQLVAFDISEFSIYRLNEELSDKY-PEVSVVPIIGDVKDSLLLDQV  352
            IGSE+CRQ+ +F P +++ ++ +E SIY++++EL + Y  E+ V+PII+DV+D   + +V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  353  MARYTPHIVFHAAAYKHVPLMEEVNAWQAVRNNVLGTYRVARAAIRHDVAHFVLISTDKA  412
            M  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V+ FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPTNVMGASKRLAEMVCSSLQQQGTRRTQFETVRFGNVLGSAGSVIPKFQEQIARGGPV  472
            VNP NVMGASKR+AEMV  S++++ T +T+F +VRFGNVLGS GSVIP F+ QI  GGPV
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNE-TSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  473  TVTHPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGKPVRIADLAHDLIRLYGFTDE  532
            TVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMGKPV+I DLA +LIRL G+ +E
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  533  QIRVVFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVP-DSLIDNLLPWLMQHRI  591
            +I + F+G+R+GEKL+EELL  DE        K+  ++ + +  + L +++   L+++ +
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

Query  592  PTD  594
              +
Sbjct  591  RDE  593

264) Npun_F2440 in NC_010628


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  328 bits (1229),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 231/500 (47%), Positives = 354/500 (71%), Gaps = 23/500 (4%)

Query  52   FGFYRRYWRYASVEELTYIAMLMVGAIVIQSMTFNLLNHILPFVTDNLPRSLPFIDGLLS  111
            F++Y+R W YASV EL  I   + ++IV  ++   ++ +  PF+       L FI  ++ 
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL------RLYFITWMMH  115

Query  112  CIFIGMLRFSFRVVER-FIQRQGVFNPRERVLIIGAGSAGVSLVQDMQSKPKLGFHAVAF  170
             ++IG  R+S R+  + FI ++G    +   LI+G+G +G  L+++M + P +G ++V  
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEG---KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  171  IDDDPRKLNVQI-RGIPVVGDRHQIPDTLKSLQIHKVIIAMPTVAGHVIREIVDICKATG  229
            +DDD+ K ++ I  G+ V G   +IP+ +K ++I K+IIA+PT++ + +REI  +C +T 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  230  IQTSTLPGIYEILNdrvrvdsirdvriedLLRREPIQTDVEQVHKFIKGKTVLITGAGGS  289
            ++   +P I +++++ + V+ ++ V +EDLL R+P++ D+  + K +  KT+L+TGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  290  IGSELCRQIFKCHPAEMILMGHGENSIFNIQQELEKLIQILKNDGKVQRYTPRIYTFIGD  349
            IGSE+CRQ+ K  P  ++L+GHGENSI++I+QEL   I + K++  V         +I+D
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL---IGLYKEEIEV-------IPIIAD  342

Query  350  IRYSVRLKQAFEQFQPNVIFHAAAHKHVPLMELNSSEAITNNVLGTKNLLDMALQYNVQN  409
            ++   R+K+  + ++P V++HAAAHKHVPLME N+ EAI NNVLGT+N  + A   +V +
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  410  FVMISTDKAVNPTSVMGASKRVAEMLVLQAAKESGKP-YVVVRFGNVLGSRGSVVPTFKK  468
            FVM+STDKAVNP +VMGASKRVAEM++    +E++K  +V VRFGNVLGSRGSV+P FKK
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  469  QIASGGPVTVTHPDICRYFMTIPEAVQLVLQAAVLSRGGEVLMLNMGEPVKIVDLAKELI  528
            QI +GGPVTVTHP++ RYFMTIPEA +LVLQA+ L+ GGE+++L+MG PVKIVDLAK+LI
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  529  RLSGYEVNKDIDILFTGLRP  548
            RLSGY  + DI+I F+G+R+
Sbjct  523  RLSGYK-EEDIGIEFSGIRS  541

265) Bcep1808_0820 in NC_009256


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  328 bits (1229),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 223/523 (43%), Positives = 359/523 (69%), Gaps = 14/523 (2%)

Query  61   HLFGLYRGLWVFASLPDLVRISKALagggvivmigavmFQPSPIIPRSVLLVSPLMLFLM  120
            ++F+LY+  W +AS+++L+ I K+++++ V   I   +F   + + R + +++ +M +L+
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLL  118

Query  121  MGGAR---ALYRAMKEFYLYGGLVGQGKPVLVIGAGTAGANLARELSRSGEWRLVGLL--  175
            +GG+R    +YR       + +  G+ KP L++G+G +G+ L R++  +    +  +L  
Sbjct  119  IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  176  DDDKTKQGREI-YGYKVLGSLDDVAHWTEALKIEYAIVAIPSASVEVQRRTATLCVRAGL  234
            DDD  KQ   I  G KV G + D+++    ++I   I+AIP+ S +  R    LC  + +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  235  KVMVLPSLTALMPGQGFLSQIREIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSI  294
             V  +P++  +M+G+  +++++ +++EDLLGRD+V +D + +   L  + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  295  GSELCRQILRFAPAQLVAFDLSEYAMYRLTEELRERFPDQ-PVVPIIGDAKDSLLLDQVM  353
            GSE+CRQ+ +F+P +++ ++ +E ++Y++ +EL   + ++  V+PII+D +D   + +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  354  SRHVPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVALAAIRHDVRHFVLISTDKAV  413
                P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTNVMGASKRLAEMACQALQQTTGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTV  473
            NP NVMGASKR+AEM  Q++++ T++T+F +VRFGNVLGS GSVIP F++QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACGLIRLYGFSEDQI  533
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA  LIRL G+ E++I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  534  QIEFTGLRPGEKLYEELLADDEATTRTPHPKLRIARAREVPDN  576
             IEF+G+R+GEKL+EELL  DE        K+  ++ + +  +
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

266) Bcep18194_A3984 in NC_007510


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  328 bits (1231),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 222/523 (43%), Positives = 360/523 (69%), Gaps = 14/523 (2%)

Query  61   HLFGLYRGLWVFASLPDLVRISKALagggvivmigavmFQPSPIIPRSVLLVSPLMLFLM  120
            ++F+LY+  W +AS+++L+ I K+++++ V   I   +F   + + R + +++ +M +L+
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLL  118

Query  121  MGGAR---ALYRAMKEFYLYGGLVGQGKPVLVIGAGTAGANLARELSRSGEWRLVGLL--  175
            +GG+R    +YR       + +  G+ KP L++G+G +G+ L R++  +    +  +L  
Sbjct  119  IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  176  DDDQTKQGREI-YGYKVLGSLDDVAHWTEALKIEYAIVAIPSASVEVQRRTATLCVRAGL  234
            DDD  KQ   I  G KV G + D+++    ++I   I+AIP+ S +  R    LC  + +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  235  KVMVLPSLTALMPGQGFLSQIREIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSI  294
             V  +P++  +M+G+  +++++ +++EDLLGRD+V +D + +   L  + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  295  GSELCRQILRFAPAQLVAFDLSEYAMYRLTEELRERFPDQ-PVVPIIGDAKDSLLLDQVM  353
            GSE+CRQ+ +F+P +++ ++ +E ++Y++ +EL   + ++  V+PII+D +D   + +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  354  SRHVPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAV  413
                P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTNVMGASKRLAEMACQALQQTSGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTV  473
            NP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPQITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACDLIRLYGFSEDQI  533
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA +LIRL G+ E++I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  534  QIEFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVPDN  576
             IEF+G+R+GEKL+EELL  DE        K+  ++ + +  +
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

267) H04402_03186 in NC_017299


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  328 bits (1230),  Expect = 7e-91, Method: Compositional matrix adjust.
 Identities = 246/534 (47%), Positives = 363/534 (68%), Gaps = 18/534 (3%)

Query  66   YSSIWKYASVEELMsiiysvsisnfifiiysyfinyKVLESNYYRFPFTVHIIFWILSIV  125
            Y   W YASV EL+ I+ SV+ S     I   ++     ++ + R+ F      W++ ++
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYFIT----WMMHLL  117

Query  126  SLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKELNYNIIGL  185
             +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +  + + +
Sbjct  118  LIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  186  IDDDIEKLGKRINS-IPVLGGREGIIKISKNKKIDEIILAIPSASSSTKSEIVSICKETN  244
            +DDD +K    I S + V G   +I  + K+ +I  II+AIP+ S     EI  +C  TN
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  245  CKLKTLPSMDKIIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINKYIKDKVVLVTGGGGS  304
              +  +P++++++ G ++++KL+ V +EDLLGR+ V LD ++I+K + +K +LVTG+GGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  305  IGSELCRQIVKFSPKKLLILDIYENNAYDVQMELN--YKYPELDKAVIIASIRDEKRLKD  362
            IGSE+CRQ+ KF+P ++++L+  EN+ Y+++ EL   YK  E++   IIA ++D  R+K 
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMKK  351

Query  363  IFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGIERFVQISTDKA  422
            +   YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A    + +FV +STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  423  VNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPVT  481
            VNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  482  VTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPGE  541
            VTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK  E
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EE  530

Query  542  DIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNTDFVEKSIEEF  595
            DI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

268) EUBELI_00082 in NC_012778


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  328 bits (1230),  Expect = 7e-91, Method: Compositional matrix adjust.
 Identities = 246/529 (47%), Positives = 365/529 (69%), Gaps = 14/529 (2%)

Query  71   VFRLYHSLWQYASIAEVYRIAEACITVEVVHFLSNKMVGNMLPRSC-----YFNAAIYLI  125
            +F LYH  W+YAS++E+  I    +T  +V   +  ++  ++ +       YF + +  +
Sbjct  61   IFDLYHRAWEYASVSELILIVK-SVTSSIV---ATGIIVPIFTQQAPFLRLYFITWMMHL  116

Query  126  IAICASRFMYRMIRTVLNKYRNIKTSNNVMIIGAGEATNVIMREIQNSSYLANSNIACII  185
            + I +SR+  R+ R  +      K +   +I+G+G + ++++R++ N++Y++   +  + 
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGKKKPT--LIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  186  DDDRRKVGKYIRGVKVIGTRDKIKEAAKLYDIDEIIFAIPSASNEVKRDILNICKETDCT  245
            DD  ++      GVKV G    I E  K ++I  II+AIP+ S++  R+I ++C  T+  
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  246  LKILPGVYQMVDGEINVNSIRNVDVLDLLGRDPIEVDIESIMGYVKDKVIMVTGGGGSIG  305
            +  +P + +++ GEI+VN +++V+V DLLGRDP+E+D+ SI   + +K I+VTG+GGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  306  SELCRQLVSHKPKQLIIFDIYENNAYDIQQELKINYPDA-NVVTLIGSIRNVSRLESVFA  364
            SE+CRQ+    P ++++++  EN+ Y+I+QEL   Y +  +V+ +I+ +++  R+  V  
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  365  QYKPDIVYHAAAHKHVPLMEVSPDEAVKNNVVGTWNVARMADKYGVKKFVMISTDKAVNP  424
             YKP +VYHAAAHKHVPLME +P+EA+KNNV+GT+N A  A    V KFVM+STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  425  TNVMGATKRICEMIVQT-YNGISKTDFVAVRFGNVLGSNGSVIPLFKRQIEAGGPVTVTD  483
             NVMGA+KR+ EM++Q+  N  SKTDFVAVRFGNVLGS GSVIPLFK+QIEAGGPVTVT+
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  484  PNIIRYFMTIPEAVSLVLQAGAYAKGGEIFILDMGEPVKIDDLAKNLIRLSGYTLGVDME  543
            P + RYFMTIPEA  LVLQAGA A GGEIF+LDMG PVKI DLAKNLIRLSGY    D+ 
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  544  IKYTGLRPgeklyeellmkeeglQETDNKLIHIGKPIEFDKENFFNNLE  592
            I ++G+R+GEKL+EELL K+E   E     I  GK   ++KE+++N+++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

269) BUPH_05536 in NC_018695


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  328 bits (1231),  Expect = 7e-91, Method: Compositional matrix adjust.
 Identities = 232/543 (43%), Positives = 372/543 (69%), Gaps = 18/543 (3%)

Query  64   RIFGLYRGMWVFASLPDLLRISKAVIAGAL-VAMVVSVLVQpspivprsvlvvsplflfl  122
            +IF+LY+  W +AS+++L+ I K+V ++ +  +++V+++ Q +P++    +     +L+ 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLL-  118

Query  123  AMGGSR---ALYRATKEFYLYGGLVAQGKPVVVLGAGNAGASLARELSRSSEWRLVGLL-  178
             +GGSR    +YR T     + +  ++ KP +++G+G +G+ L R++  ++   +  +L 
Sbjct  119  -IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  179  -DDDVAKHGREI-YGYKVLGSISELPRMAEELKTEYAIIAIPSASVDVQRRVATLCVRAG  236
             DDD  K+   I  G KV G I ++P +   ++    IIAIP+ S +  R +  LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  237  VRALVLPALTAVSQGQAFLSRVRQIDLEDLLGRDPVMIDTDHVEALLKNRVVMVTGAGGS  296
            V  + +P +  V  G+  +++++++++EDLLGRDPV +D   +   L ++ ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  297  IGSELCRQILRFGPVQLVAFDISEFSIYRLNEELSDKY-PEVSVVPIIGDVKDSLLLDQV  355
            IGSE+CRQ+ +F P +++ ++ +E SIY++++EL + Y  E+ V+PII+DV+D   + +V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  356  MARYTPHIVFHAAAYKHVPLMEEVNAWQAVRNNVLGTYRVARAAIRHDVAHFVLISTDKA  415
            M  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V+ FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  416  VNPTNVMGASKRLAEMVCSSLQQQGTRRTQFETVRFGNVLGSAGSVIPKFQEQIARGGPV  475
            VNP NVMGASKR+AEMV  S++++ T +T+F +VRFGNVLGS GSVIP F+ QI  GGPV
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNE-TSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  476  TVTHPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGKPVRIADLAHDLIRLYGFTEE  535
            TVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMGKPV+I DLA +LIRL G+ EE
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  536  QIRVVYTGLRPGEKLYEELLADDETTTRTPHPKLRIAKAREVP-DSLIDNLLPWLMQHRV  594
            +I + ++G+R+GEKL+EELL  DE        K+  +K + +  + L +++   L+++ V
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

Query  595  PTD  597
              +
Sbjct  591  RDE  593

270) CL2_27340 in NC_021016


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  327 bits (1227),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 234/538 (44%), Positives = 363/538 (68%), Gaps = 29/538 (5%)

Query  70   YRLYSTQWKYAGISDFINvvkavviaaaFQ--LIGIYMLQWEIPRSyyflylvylllGMF  127
            + LY   W YA++S++I +VK+V  +      ++ I+  Q  + R             ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-------------LY  108

Query  128  FIRLLVRLIQ-GSEPLK--------VNDIGKKKVPVMLIGAGEAGSIILNEIKKSTYVTK  178
            FI  +++L+  G+  L         ++  GKKK P +++G+G +GS+++ ++ ++ Y+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIYRKTFISKEGKKK-PTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  179  TIRCIIDDDPAK-KGTYLSGIPVVGNRNTILRNAVKFDVEEIILAIPTIEPKDRKDILEI  237
                ++DDD+ K K +  SG+ V G  + I     KF++  II+AIPT+  +  ++I  +
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  238  CKQTGCRLSILPGLYQLINSEVTVSALREVEIEDLLGREPVKANLPSIMSYVKDRVVFVT  297
            C  T   +  +P + +++++E+ V+ L+ VE+EDLLGR+PV  +++SI   + ++ ++VT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  298  GGGGSIGSEICRQIARYQPKKLVIIDNYENNAYEIQMELKRT-HPELDLKVLIVSVQNHL  356
            G+GGSIGSEICRQ+ ++ P +++++++ EN+ Y+I+ EL      E+++  +I  VQ+  
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKE  347

Query  357  RIHNIFEDYKPDIVFHAAAHKHVPLMEDSPHDAIKNNVFGTFNIAKEAGMSGVKRMVLIS  416
            R+ ++ + YKP +V+HAAAHKHVPLME +P++AIKNNV+GT N A  A ++ V + V++S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  417  TDKAVRPTNIMGASKRICEMVIQYMNS-LYDTEYVAVRFGNVLGSNGSVVPLFKKQIANG  475
            TDKAV P N+MGASKR+ EMVIQ MN+    T++VAVRFGNVLGS GSV+PLFKKQI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  476  GPVTVTHPEIIRYFMTIPEAVSLVLEAGAYAEGGEIFILDMGEPVKILDLAKNMIRLSGL  535
            GPVTVTHP + RYFMTIPEA  LVL+AGA A GGEIF+LDMG PVKI+DLAKN+IRLSG 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  536  TPGEDIEIQFTGLRPGEKLYEELLIDEENKKETKNKRIFIGSPRMMETEQFSELIAEL  593
               EDI I+F+G+R+GEKL+EELL  +E   E    +I+ G  + +E E++ + I ++
Sbjct  528  K-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

271) Metme_1198 in NC_015572


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  327 bits (1228),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 219/508 (44%), Positives = 365/508 (72%), Gaps = 12/508 (2%)

Query  62   FGLYRGVWRFSSMPDLIRIAKSVSAGIFFITGILFLYNRLEGLPRSVIPl--ymlillal  119
            F+LY+  W ++S+++LI I KSV+++I     I+ ++ +   + R  +      L+L++ 
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGG  121

Query  120  lCVPRFVYRFWKERDIVERIGLR--ALIVGAGAAGDMLVRDLLSNPNSGYIPVLFADDQA  177
              +++ +YR    + ++ + G +  +LIVG+G +G +L+R++++ P  G  PVL  DD++
Sbjct  122  SRLSWRIYR----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  178  GKLNREI-RGIRVAGRIEQIPALIEQWEVEVVLIAIPSATDTQMRRIVEICESSKVRFQT  236
             K +  I  G++V G I +IP L+ + ++  ++IAIP+ ++ ++R I  +CE+++V    
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  237  LPSVKELLSGAVTKASLRNVSITDILGRDPVWLDWHGIQASLHDKTILVTGGGGSIGSEL  296
            +P++ +++SG +    L++V + D+LGRDPV LD  +I   L +KTILVTG+GGSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  297  CKQLAKIQPRNLIVFDQCEFNLYKIDAELSRHY-PQLPHLAILGDVTQALAVQQIIDSQK  355
            C+Q+ K+ P  ++++++ E ++Y I+ EL   Y  ++  ++I++DV +   +++++++ K
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  356  PDVIFHAAAYKHVPLLEGQAREAVHNNLIGTKIVAEAAIASNVARFVLISTDKAVNPTNV  415
            P V++HAAA KHVPL+E +++EA+ NN++GT+  AEAA  ++V++FV++STDKAVNP NV
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  416  MGATKRAAEILCQNLDK-ASNTRFTTVRFGNVLDSAGSVVPLFREQIRAGGPVTVTHPDI  474
            MGA+KR AE++ Q++++ +S+T F +VRFGNVL+S GSV+PLF+ QI AGGPVTVTHP++
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  475  TRYFMTIPEACQLIMLAETVGKGGEVFVLDMGEPVKIVYLAEQMIRLSGKVPGKDIHIEF  534
            TRYFMTIPEA +L++ A +++ GGE+FVLDMG PVKIV LA ++IRLSG     DI IEF
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG-YKEEDIGIEF  536

Query  535  VGLRPGEKLYEELFHHEEQLMETGYSKL  562
             G+R+GEKL+EEL++ +E   E  Y K+
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKI  564

272) Bamb_0765 in NC_008390


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  327 bits (1226),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 226/538 (43%), Positives = 368/538 (69%), Gaps = 15/538 (2%)

Query  61   HLFGLYRGLWVFASLPDLMRISKavggggvivmigavmFQPSPIIPRSVLIVSPLMLFLA  120
            ++F+LY+  W +AS+++L+ I K+V ++ V   I   +F   + + R + +++ +M +L 
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLL  118

Query  121  MGGAR---ALYRATKEFYLYGGLVGQGKPVLVLGAGTAGASLARELSRSGEWRLVGLL--  175
            +GG+R    +YR T     + +  G+ KP L++G+G +G+ L R++  +    +  +L  
Sbjct  119  IGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  176  DDDVTKQGREI-YGYKVLGSFNDLKHWTDAMKIEYAIIAIPSASVETQRRVATLCVRAGV  234
            DDD  KQ   I  G KV G ++D+ +     +I   IIAIP+ S +  R +  LC  + V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  235  KAMVLPSLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSI  294
                +P++  +M+G+  +++++++++EDLLGRD+V +D + +   L  + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  295  GSELCRQILRFAPAQLVAFDLSEYAMYRLAEELRERFPDQ-PVVPIIGDAKDSLLLDQVM  353
            GSE+CRQ+ +F+P +++ ++ +E ++Y++ +EL   + ++  V+PII+D +D   + +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  354  SRHAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVACAAIRHDVRHFVLISTDKAV  413
                P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTNVMGASKRLAEMVCQALQQTSGGTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTV  473
            NP NVMGASKR+AEMV Q++++ ++ T+F +VRFGNVLGS GSVIP F++QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPEITRFFMTIPEASQLVLQASSMGHGGEIFILEMGQPVRIVDLARDLIRLYGFSEGQI  533
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+L+MG+PV+IVDLA++LIRL G+ E +I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  534  RIDFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVP-DHLLDELLPWLMQRRV  590
             I+F+G+R+GEKL+EELL  DE        K+  ++ + +  ++L + +   L++  V
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

273) capD in NC_016589


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  327 bits (1226),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 217/513 (43%), Positives = 355/513 (70%), Gaps = 16/513 (3%)

Query  61   RVFGLYRGMWVFASLPDLMRISKSIvvgalvvmvgavm-SQPMPIIPRSVLIVSPLLLFL  119
            ++F+LY+  W +AS+++L+ I KS+  + +   +   + +Q  P++   + +++ ++ +L
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLL  117

Query  120  AMGGAR---ALYRAGKEFYLYGGLVGQGKPVIVLGAGTAGAMLARELARSSEWRLVGLL-  175
             +GG+R    +YR       + +  G+ KP +++G+G +G++L R++  ++   +  +L 
Sbjct  118  LIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  -DDDPAKQGREVL-GHKVLGSFGDLPRFAEQLKTDYVIIAIPSASVAEQRRVATLCVRAG  233
             DDD+ KQ   +  G KV G + D+P +  +++   +IIAIP+ S    R +  LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  VKVMVLPALSPLTEGTNFLSRVRQIDLEDLLGREPVKIDMPHVEQLLHGRVVMVTGGGGS  293
            V V  +P +  +  G   +++++++++EDLLGR+PV +DM+ + + L  + ++VTG+GGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQILRFSPAQLIAYDLSEYAMYRLIEELHEKF-PECSVIPVVGDAKDSLLLDQT  352
            IGSE+CRQ+ +F+P +++  + +E ++Y++ +EL   +  E  VIP+++D +D   + + 
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  353  MARFTPHIVFHAAAYKHVPLMEEQNAWQAVRNNVLGTLRVARAAIRHDVRHFVLISTDKA  412
            M  + P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPTNVMGASKRLAEMACQALQQSAPRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVT  472
            VNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  VTHPEITRFFMTIPEAAQLVLQASSMGRGGEIFILDMGQPVKIVDLARDLIRLYGFSEEQ  532
            VTHP +TR+FMTIPEA++LVLQA++++ GGEIF+LDMG+PVKIVDLA++LIRL G+ EE+
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IRIVFTGLRPGEKLYEELLADDETTTRTPHPKL  565
            I I F+G+R+GEKL+EELL  DE        K+
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKI  564

274) Caur_0945 in NC_010175


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  327 bits (1225),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 235/560 (42%), Positives = 380/560 (68%), Gaps = 25/560 (4%)

Query  1    MKLIPSPTRNRYFFFLDAILLPLMAYMSFVVRLDDLPNGNallgwlilaiiaTPVHLIVF  60
            MK I+   R   ++F+D+I++ +  ++++ + L+ + +G ++   ++ ++I    H +  
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYI-LEPFFKGYSINVLILSSLILLISHHVFA  59

Query  61   RHLGVYSRYWRYasidellllisaislamlisTPTALVVASVTPFALLPRSVPIIFFFF-  119
            + +++Y R W YAS+ EL+L++          + T+ +VA+    +++ +  P++ ++F 
Sbjct  60   QIFDLYHRAWEYASVSELILIVK---------SVTSSIVATGIIVPIFTQQAPFLRLYFI  110

Query  120  ----GLAATIGPRLIARIRWHRATVKRKSKSELTFNMQRVLIMGAGSAGTMIARELRDNP  175
                 L    G+RL  RI  +++ + + +K       +  LI+G+G +G+++ R++ + P
Sbjct  111  TWMMHLLLIGGSRLSWRI-YRKTFISKEGKK------KPTLIVGGGRGGSLLIRQMMNTP  163

Query  176  QLGMVAVGFLDDDPLKQGMHI-YGVPVLGNRYDIPRLARERQAHYVIIAMPSASGKDIRS  234
             +GM +V  +DDD+ KQ M I  GV V G   DIP L +  +   +IIA+P+ S + +R 
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  235  IVELCERTRVKTKIMPGLYEMLDGKVSVNQLRNVQIEDLLRRPPVQTDIAAVHQLLRGKR  294
            I  LCE T V    MP + +++ G + VN+L++V++EDLL R PV+ D+A++ + L  K 
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  295  VLVTGGGGSIGSELCRQILRASPEELIILGHGENSVFTIEQELRRVAPPTTKLSVVIADI  354
            +LVTG+GGSIGSE+CRQ+ + +P+ +++LGHGENS++ I+QEL  +      +  +IAD+
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADV  343

Query  355  RFAERIMHIFEQYRPEIVFHAAAHKHVPLMELHPSEAVTNNVLGTRNLLSATMQVDVSHF  414
            +  ER+  + + Y+P +V+HAAAHKHVPLME +P EA+ NNVLGTRN   A+   +VS F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  415  VMISSDKAVNPTSVMGATKRVAELLVHEAARQSGRA-YVAVRFGNVLGSRGSVVLTFKQQ  473
            VM+S+DKAVNP +VMGA+KRVAE++++    +++++ +VAVRFGNVLGSRGSV+  FK+Q
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  474  IAAGGPVTVTHPEMRRFFMTIPEAVQLTLQASVLGKGGEVFVLDMGEPIRIVDLARDMIE  533
            I AGGPVTVTHP M R+FMTIPEA +L LQA+ L+ GGE+FVLDMG P++IVDLA+++I 
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  534  LSGLQVGRDIDIVFTGLRPG  553
            LSG +   DI+I F+G+R+G
Sbjct  524  LSGYK-EEDIGIEFSGIRSG  542

275) Chy400_1031 in NC_012032


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  327 bits (1225),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 235/560 (42%), Positives = 380/560 (68%), Gaps = 25/560 (4%)

Query  1    MKLIPSPTRNRYFFFLDAILLPLMAYMSFVVRLDDLPNGNallgwlilaiiaTPVHLIVF  60
            MK I+   R   ++F+D+I++ +  ++++ + L+ + +G ++   ++ ++I    H +  
Sbjct  1    MKYISIKQRFMMLLFIDSIIVTFSVFLGYYI-LEPFFKGYSINVLILSSLILLISHHVFA  59

Query  61   RHLGVYSRYWRYasidellllisaislamlisTPTALVVASVTPFALLPRSVPIIFFFF-  119
            + +++Y R W YAS+ EL+L++          + T+ +VA+    +++ +  P++ ++F 
Sbjct  60   QIFDLYHRAWEYASVSELILIVK---------SVTSSIVATGIIVPIFTQQAPFLRLYFI  110

Query  120  ----GLAATIGPRLIARIRWHRATVKRKSKSELTFNMQRVLIMGAGSAGTMIARELRDNP  175
                 L    G+RL  RI  +++ + + +K       +  LI+G+G +G+++ R++ + P
Sbjct  111  TWMMHLLLIGGSRLSWRI-YRKTFISKEGKK------KPTLIVGGGRGGSLLIRQMMNTP  163

Query  176  QLGMVAVGFLDDDPLKQGMHI-YGVPVLGNRYDIPRLARERQAHYVIIAMPSASGKDIRS  234
             +GM +V  +DDD+ KQ M I  GV V G   DIP L +  +   +IIA+P+ S + +R 
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  235  IVELCERTRVKTKIMPGLYEMLDGKVSVNQLRNVQIEDLLRRPPVQTDIAAVHQLLRGKR  294
            I  LCE T V    MP + +++ G + VN+L++V++EDLL R PV+ D+A++ + L  K 
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  295  VLVTGGGGSIGSELCRQILRASPEELIILGHGENSVFTIEQELRRVAPPTTKLSVVIADI  354
            +LVTG+GGSIGSE+CRQ+ + +P+ +++LGHGENS++ I+QEL  +      +  +IAD+
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADV  343

Query  355  RFAERIMHIFEQYRPEIVFHAAAHKHVPLMELHPSEAVTNNVLGTRNLLSATMQVDVSHF  414
            +  ER+  + + Y+P +V+HAAAHKHVPLME +P EA+ NNVLGTRN   A+   +VS F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  415  VMISSDKAVNPTSVMGATKRVAELLVHEAARQSGRA-YVAVRFGNVLGSRGSVVLTFKQQ  473
            VM+S+DKAVNP +VMGA+KRVAE++++    +++++ +VAVRFGNVLGSRGSV+  FK+Q
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  474  IAAGGPVTVTHPEMRRFFMTIPEAVQLTLQASVLGKGGEVFVLDMGEPIRIVDLARDMIE  533
            I AGGPVTVTHP M R+FMTIPEA +L LQA+ L+ GGE+FVLDMG P++IVDLA+++I 
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  534  LSGLQVGRDIDIVFTGLRPG  553
            LSG +   DI+I F+G+R+G
Sbjct  524  LSGYK-EEDIGIEFSGIRSG  542

276) PTH_1075 in NC_009454


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  326 bits (1222),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 218/429 (51%), Positives = 320/429 (75%), Gaps = 4/429 (0%)

Query  4    AKAKPVLIIgagvaggvvaEVLSKNRNREFEPVGFVDDDPEKQQK-ILHGLPVLGTREDI  62
            +K KP LI+G+G +G+++   + +      EPV  VDDD++KQ+  I  G+ V G   DI
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  63   PALVRRLNIEEIIIAIPSARGQVVSQIVEICQRSRARLKILPGFYDLITGRIKISKIRDV  122
            P LV+++NI  IIIAIP+   Q + +I  +C+ +   +  +P + ++++G I ++K++ V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  123  EIDDLLGREPVFLNVEQVAGYLAGRTVLITGAGGSIGSELSRHLARFSLKKLILLGRGEG  182
            E++DLLGR+PV L++  ++  L+ +T+L+TGAGGSIGSE+ R++ +F+  +++LLG+GE 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  183  SIYEIESDLRDNY-PGLGMEAEIGDIRDRPRMDKIFGSHKPDVVFHAAAHKHVFYMERCP  241
            SIY+I+ +L + Y   + + + I+D++D+ RM K+  + KP VV+HAAAHKHV  ME  P
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  242  DEAVKNNIIGTRNVAEAAFRNGVGTFILISSDKAVNPASIMGATKRVAEMIIQTMNDRGG  301
            +EA+KNN++GTRN AEAA    V+ F+++S+DKAVNP+++MGA+KRVAEM+IQ+MN+  +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  302  -TRFAAVRFGNVLGSRGSVVPLFKRQIARGGPVTITHPGMVRYFMTTGEAAQLVIEAGAL  360
             T F AVRFGNVLGSRGSV+PLFK+QI  GGPVT+THPGM RYFMT  EA++LV++AGAL
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  361  ARGGEIFVLDMGRPVKIIDLARNLIRLSGYEPGKDIRFRFTGMRPGEKLVEQLVGDDEEV  420
            A GGEIFVLDMG+PVKI+DLA+NLIRLSGY    DI + F+G+R+GEKL E+L+  DE  
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIH  556

Query  421  VPTGHKRIF  429
                  +I+
Sbjct  557  PEQVYEKIY  565

277) CLB_3138 in NC_009697


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  326 bits (1222),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 247/535 (47%), Positives = 367/535 (69%), Gaps = 18/535 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKVLESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F    I W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYF----ITWMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKELNYSIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +    + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LVDDDIEKLGKRI-NGIPVLGGResiikisknkkideiiLAIPSAASSTKSEIVSICKET  243
            +VDDD +K    I +G+ V G    I  + K+ +I  II+AIP+ +     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINRYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGR+ V LD ++I++ + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNAYDVQMELN--YKYPELDKAVIIASIRDEKRLR  361
            SIGSE+CRQ+ KF+P ++++L+  EN+ Y+++ EL   YK  E++   IIA ++D  R++
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  NIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGIERFVQISTDK  421
            ++   YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A    + +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPE  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK E
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEF  595
            EDI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

278) CBO3109 in NC_009495


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  326 bits (1222),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 247/535 (47%), Positives = 367/535 (69%), Gaps = 18/535 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKVLESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F    I W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYF----ITWMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKELNYSIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +    + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LVDDDIEKLGKRI-NGIPVLGGResiikisknkkideiiLAIPSAASSTKSEIVSICKET  243
            +VDDD +K    I +G+ V G    I  + K+ +I  II+AIP+ +     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINRYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGR+ V LD ++I++ + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNAYDVQMELN--YKYPELDKAVIIASIRDEKRLR  361
            SIGSE+CRQ+ KF+P ++++L+  EN+ Y+++ EL   YK  E++   IIA ++D  R++
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  NIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGIERFVQISTDK  421
            ++   YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A    + +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPE  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK E
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEF  595
            EDI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

279) CLC_3011 in NC_009698


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  326 bits (1222),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 247/535 (47%), Positives = 367/535 (69%), Gaps = 18/535 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKVLESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F    I W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYF----ITWMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKELNYSIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +    + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LVDDDIEKLGKRI-NGIPVLGGResiikisknkkideiiLAIPSAASSTKSEIVSICKET  243
            +VDDD +K    I +G+ V G    I  + K+ +I  II+AIP+ +     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINRYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGR+ V LD ++I++ + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNAYDVQMELN--YKYPELDKAVIIASIRDEKRLR  361
            SIGSE+CRQ+ KF+P ++++L+  EN+ Y+++ EL   YK  E++   IIA ++D  R++
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  NIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGIERFVQISTDK  421
            ++   YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A    + +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPE  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK E
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEF  595
            EDI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

280) ANT_22620 in NC_014960


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  326 bits (1222),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 226/538 (43%), Positives = 354/538 (66%), Gaps = 17/538 (3%)

Query  65   FGLYRRMWIYASIREalmvvaasvtasallaatmIALTSFRLFVGFPRSVLIIDFFLSVF  124
            F+LY+R W YAS+ E +++V +  ++    +   I +  F     F R + +I   + ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATG---IIVPIFTQQAPFLR-LYFITWMMHLL  117

Query  125  AAGGLRFTLRLLAESRINQAIQEGAGLRQPQKVLIVGAGDAGALVVRELQKNPQLNLIPI  184
              GG R++ R+   + I++      G ++P   LIVG+G +G+L++R++ + P + + P+
Sbjct  118  LIGGSRLSWRIYRKTFISKE-----GKKKP--TLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  185  GFLDDNPAKQRQQI-YGVPVVGTLSDLEKVIDQTRAQQVIIAIPSAAGRVVRLVADACRA  243
              +DD++ KQ+  I  GV V G + D+  ++ +   +++IIAIP+ + + +R +   C +
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  244  KGVPFRTMPGIYELLGGTVSVSRLREVDITDLLRRNPVQIDESLVGATLSGKVVLITGAG  303
              V    MP I ++++G + V++L+ V++ DLL R+PV++D + ++  L+ K +L+TGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  304  GSIGRELCRQVARWGPSELILLGHGENSIFEALMELRENF-PSLLFRPVIADVRDYGRIR  362
            GSIG E+CRQV +  P  ++LLGHGENSI++   EL   +   +   P+IADV+D  R++
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMK  350

Query  363  NVFLRHRPEIVFHAAAHKHVPLMELNVEEAVTNNVLGTMNVVSAALESGVERLVMVSTDK  422
            +V    +P +V+HAAAHKHVPLME N +EA+ NNVLGT N   AA  + V ++VMVSTDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  423  AIRPANIMGATKRLAEMIVLDAARRSGRS-YSVVRFGNVLGSRGSVVPLFKRQIARGGPV  481
            A+ P+N+MGA+KR+AEM++      ++++ +  VRFGNVLGSRGSV+PLFK+QI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  482  TVTHPEMRRYFMTIPEAVHLVLQASAMGEGGETFVLNMGEQIRILDLAEDLIRLSGLEPG  541
            TVTHP M RYFMTIPEA +LVLQA+A++ GGE FVL+MG  ++I+DLA +LIRLSG    
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  542  KDIEIVFTGIRPGEKLSEDLWDEGVPIERTEHPEIFRVNSETPELSGEELRSLVEQVL  599
             DI I F+GIR+GEKL E+L + +          I+R  +    +  EEL + +++ L
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYR--GKVQKIEKEELYNKIDDFL  585

281) CLJ_B3375 in NC_012658


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  326 bits (1222),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 245/519 (48%), Positives = 356/519 (69%), Gaps = 18/519 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKILESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F      W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYFIT----WMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNRELNYSIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +    + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LIDDDIEKLGKRI-NGIPVLGGResiikisknkkideiiLAIPSASSSTKSEIVSICKET  243
            ++DDD +K    I +G+ V G    I  + K+ +I  II+AIP+ S     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINKYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGR+ V LD ++I+K + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNAYDVQMELN--YKYPELDKAVIIASIRDEKRLK  361
            SIGSE+CRQ+ KF+P ++++L+  EN+ Y+++ EL   YK  E++   IIA ++D  R+K
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  DIFSVYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGIERFVQISTDK  421
             +   YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A    + +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPG  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK  
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEK  579
            EDI IE++G+R+GEKL+EELL  +        +KI+  K
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

282) CLK_2503 in NC_010520


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  326 bits (1222),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 247/535 (47%), Positives = 366/535 (69%), Gaps = 18/535 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKILESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F    I W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYF----ITWMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNKELNYSIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +    + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LVDDDIEKLGKRI-NGIPVLGGResiikisknkkideiiLAIPSAPSSTKSEIVSICKET  243
            +VDDD +K    I +G+ V G    I  + K+ +I  II+AIP+ +     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINRYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGR+ V LD ++I++ + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNAYDVQMELN--YKYPDLDKAVIIASIRDEKRLK  361
            SIGSE+CRQ+ KF+P ++++L+  EN+ Y+++ EL   YK  +++   IIA ++D  R+K
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  DIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGIERFVQISTDK  421
             +   YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A    + +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPE  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMGKPVKIVDLAK+LI LSGYK E
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEF  595
            EDI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

283) CLD_1431 in NC_010516


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  325 bits (1221),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 246/535 (46%), Positives = 364/535 (69%), Gaps = 18/535 (3%)

Query  65   LYSSIWKYASVEELMsiiysvsisniifiiysyfinyKILESNYYRFPFTVHIIFWILSI  124
            LY   W YASV EL+ I+ SV+ S +   I   ++     ++ + R+ F      W++ +
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ---QAPFLRLYFIT----WMMHL  116

Query  125  VSLGGTRFIYRVIEDKECNKNKCNCDSKEKKlliigagdaaaliiKEIKRNRELNYSIIG  184
            + +GG+R+  R+       K   + ++K K  LI+G+G +++L+I+++     +    + 
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  185  LIDDDIEKLGKRI-NGIPVLGGResiikisknkkideiiLAIPSASSSTKSEIVSICKET  243
            ++DDD +K    I +G+ V G    I  + K+ +I  II+AIP+ S     EI  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  244  SCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINKYIKDKVVLVTGGGG  303
            +  +  +P++++V+ G ++++KL+ V +EDLLGR+ V LD ++I+K + +K +LVTG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  304  SIGSELCRQIVKFSPKKLLILDIYENNAYDVQMELN--YKYPELDKAVIIASIRDEKRLK  361
            SIGSE+CRQ+ KF+P ++++L+  EN+ Y+++ EL   YK  E++   IIA ++D  R+K
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVIPIIADVQDKERMK  350

Query  362  DIFSSYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTYNLIKCAHEFGTERFVQISTDK  421
             +  +YKP VV+HAAAHKHVPLME NP E+IKNNV+GT N    A      +FV +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  422  AVNPTNIMGATKRFCEIMIQAFDK-ISKTEFVAVRFGNVLGSNGSVIPLFKKQIAHGGPV  480
            AVNP N+MGA+KR  E++IQ+ ++  SKT+FVAVRFGNVLGS GSVIPLFKKQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  481  TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGRPVKIVDLAKDLITLSGYKPG  540
            TVTHP + RYFMTIPEA++LV+QAGA+A GGEIFVLDMG+PVKIVDLAK+LI LSGYK  
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  541  EDIKIEYTGLRPGEKLYEELLMDEIALTSTGHNKIFVEKPMENNIDFVEKSIEEF  595
            EDI IE++G+R+GEKL+EELL  +        +KI+  K    + + + + I++F
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

284) BamMC406_0776 in NC_010551


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  325 bits (1220),  Expect = 5e-90, Method: Compositional matrix adjust.
 Identities = 227/539 (43%), Positives = 372/539 (70%), Gaps = 17/539 (3%)

Query  61   HVFGLYRGLWVFASLPDLMRISKAVAGGSVIVMIGAVMF-QPTPIIPRsvllvsplmlfl  119
            ++F+LY+  W +AS+++L+ I K+V+++ V   I   +F Q +P++   + +++ +M +L
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLL  117

Query  120  lmGGAR---ALYRATKEFYLYGGLVGQGKPVLVLGAGTAGASLARELSRSGEWRLVGLL-  175
            L+GG+R    +YR T     + +  G+ KP L++G+G +G+ L R++  +    +  +L 
Sbjct  118  LIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  -DDDVTKHGREI-YGYKVLGSFNDLKHWTDAIKVEYAIIAIPSASVETQRRVATLCVRAG  233
             DDD  K+   I  G KV G ++D+ +    +++   IIAIP+ S +  R +  LC  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  IKAMVLPSLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGS  293
            +    +P++  +M+G+  +++++++++EDLLGRD+V +D + +   L  + ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQILRFAPAQIVAFDLSEYAMYRLTEELRERFPDQ-PVVPIIGDAKDSLLLDQV  352
            IGSE+CRQ+ +F+P +I+ ++ +E ++Y++ +EL   + ++  V+PII+D +D   + +V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  353  MSRHAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKA  412
            M    P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPTNVMGASKRLAEMACQALQQTSGGTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVT  472
            VNP NVMGASKR+AEM  Q++++ ++ T+F +VRFGNVLGS GSVIP F++QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  VTHPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVRIVDLARDLIRLYGFSEGQ  532
            VTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PV+IVDLA++LIRL G+ E +
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IRIEFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVP-DHLLDELLPWLMQNRV  590
            I IEF+G+R+GEKL+EELL  DE        K+  ++ + +  ++L + +   L+++ V
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

285) Deipr_2068 in NC_015169


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  325 bits (1218),  Expect = 7e-90, Method: Compositional matrix adjust.
 Identities = 208/446 (47%), Positives = 316/446 (71%), Gaps = 5/446 (1%)

Query  166  QRRVLIVGAGEAGTLIVREMLRHPKSKLHPVGFVDDAPDKRGTRLV-GLPVFGPVSTLPD  224
            ++  LIVG+G +G+L++R+M+  P   ++PV  VDD ++K+   +  G+ V G +  +P+
Sbjct  140  KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPE  199

Query  225  VVRREGVEEVLIAVPSAAGTFVRRVVDLAKDTGVSYRIIPGVFEILSGNVTLGQIRDVNL  284
            +V++  +  ++IA+P+ +   +R +  L  +T V    +P + +++SG++ + +++ V++
Sbjct  200  LVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEV  259

Query  285  EDLLRRPAVQLNTAEIAGYLRGRTVLVTGAGGSIGSEIVRQILPFGPARVILLGRGEGSI  344
            EDLL R +V+L+ A I+  L  +T+LVTGAGGSIGSEI RQ+  F P R++LLG+GE SI
Sbjct  260  EDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSI  319

Query  345  FAIQQELRRL-APELPQLALIGDVRDAERVEQVFRETRPQVVFHAAAHKHVPLMEAAPSE  403
            + I+QEL  L   E+  +++I+DV+D ER+ +V +  +P VV+HAAAHKHVPLME  P E
Sbjct  320  YHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQE  379

Query  404  AILNNVIGTRNVVDMSLKYGVERLVNISTDKAVNPTSVMGASKRMAEKTVSagaaraaag  463
            AI NNV+GTRN  + +    V ++V +STDKAVNP +VMGASKR+AE  + +    ++  
Sbjct  380  AIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKT  439

Query  464  qaFVSVRFGNVLGSRGSVVPTFMRQIRQGGPVTVTHPEMTRYFMTIPEAARLVLQAGGLA  523
            + FV+VRFGNVLGSRGSV+P F +QI  GGPVTVTHP MTRYFMTIPEA+RLVLQAG+LA
Sbjct  440  D-FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALA  498

Query  524  ENGKVYVLNMGEPVNISDLARDVIRLSG--AQDIEVVYSGVRPGEKLYEELLTSSEGTDA  581
              G ++VL+MG PV+I DLA+++IRLSG   +DI + +SG+R+GEKL+EELL   E    
Sbjct  499  TGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPE  558

Query  582  TTHSEIFSARLERVDPETLDRDIAGL  607
                 I+ +++++++ E L   I ++
Sbjct  559  QVYEKIYRGKVQKIEKEELYNKIDDF  584

286) CPE0463 in NC_003366


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  324 bits (1217),  Expect = 9e-90, Method: Compositional matrix adjust.
 Identities = 229/523 (44%), Positives = 353/523 (68%), Gaps = 23/523 (4%)

Query  61   IFKMYKSIWTIVGIDEVAFGLIACLIATGiilitstiissiyyidyitVLLAGLFI----  116
            IF +Y   W   ++ E+       LI  ++     +    +  +   + +L   FI    
Sbjct  61   IFDLYHRAWEYASVSELI------LIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMM  114

Query  117  -MIFTIGIRVSFRIYRRMISHGRVLLNSSNISNLEKILIIGAGSCGQLIIEEIRKQNPIK  175
             +++  G R+S RIYR+ +         S+ ++    LI+G+G  G L+I ++ +   + 
Sbjct  115  HLLLIGGSRLSWRIYRKTFI--------SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  176  QKVIGVIDDNPSKIG-TYLRGIKILGNRNKIIEISEEKNVDLILIAMPSVDGKTKKEIIE  234
               + V+DD+++K   +   G+K+ G  + I E+    N+  I+IA+P++  +  +EI  
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  235  ICQSTRAKVKIIPGMYELIGGKVSLNRMRDIDLRDLLGREEVILDKKGIKDYIENKVVMV  294
            +C++T   V  +P + ++++G + +N+++ +++ DLLGR+ V LD  +I   + +K ++V
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  295  TGGGGSIGSELCRQIAKFSPKLLLILDIYENNAYELENEIISNFKNLKEKV-LIASVREE  353
            TG+GGSIGSE+CRQ+ KF+P  +++L+  EN+ Y++++E+I+ +K+  E + +IA V++ 
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDK  346

Query  354  KRLENIFNEYKPQVIFHAAAHKHVPLMERNPEEAIKNNVIGTLNVAECAHKYGAERFVLI  413
             R+ ++ + YKP V++HAAAHKHVPLME NP+EAIKNNV+GT N AE A      +FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  414  STDKAVNPTNVMGASKRMCEMIIQAIDKN-SNTEFVAVRFGNVLGSNGSVIPLFKKQIAK  472
            STDKAVNP NVMGASKR+ EM+IQ+++++ S+T+FVAVRFGNVLGS GSVIPLFKKQI  
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  473  GGPVTLTHKKITRYFMLIPEAAQLVLQAGAYAKGGEIFVLDMGNPVLIYDLAKDLIKLSG  532
            GGPVT+TH  +TRYFM IPEA++LVLQAGA A GGEIFVLDMG+PV I DLAK+LI+LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  533  FEPEVDIKIEITGLRPGEKLYEELLMDEEGLRKTSHEKIFIAK  575
            +  E DI IE++G+R+GEKL+EELL  +E       EKI+ +K
Sbjct  527  YKEE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

287) AXYL_06301 in NC_014640


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  322 bits (1208),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 225/497 (46%), Positives = 355/497 (72%), Gaps = 16/497 (3%)

Query  63   GLYRGMWIFASLPDL----KRVLNVVLASTVALLLFAFLNRGQPALPRSIlvlyplllll  118
            +LY+  W +AS+++L    K V + ++A+ + + +F+     Q+++ R +  +  ++ LL
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT----QQAPFLR-LYFITWMMHLL  117

Query  119  vMGGGRAAWRMWKEHRLYRAGFGKgtpvvvvgagtagaMLVRELGRSS--DWHVVALVDD  176
            ++GG+R +WR+ +  + + +  GK  P ++VG+G +G++L+R++  ++  + + V +VDD
Sbjct  118  LIGGSRLSWRIYR--KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  177  DPAKRGLEI-SGCRVAGGTNRLPEILNDYGAKHVILAIPSAKGTAIRHVSDIVTRAGASL  235
            D+ K+ + I SG +V G  + +PE+++ +  K +I+AIP+     +R+++ +   +   +
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  236  FTVPGLSELMSGRVAINMMRPVKIEDLLGRESVHIDNVNIHEMIAGKQILVTGAGGSIGS  295
            F +P + ++MSG + +N ++ V +EDLLGR++V++D  +I   ++ K ILVTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  296  ELCRQLARFAPAAIILYEVSEFALYTIEQWFTD-NQPSVRVIPLAGDVKDATRVDEVFAR  354
            E+CRQ+ +F+P  I+L   +E ++Y I+Q + +  +  + VIP+ +DV+D  R+  V   
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  355  YKPDIVFHAAAYKHVPLMEIDNAWQAVRNNVLGTLNVAQCAERYQAQRFVLISTDKAVNP  414
            YKP +V+HAAA KHVPLME +   +A++NNVLGT N A+ A   +  +FV++STDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQ-EAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  415  TNVMGATKRMAEMVCEVLHGRNGKTRFQIVRFGNVLGSTGSVIPRFQSQISRGGPVSVTH  474
             NVMGA+KR+AEMV + ++   +KT F  VRFGNVLGS GSVIP F+ QI  GGPV+VTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  475  PEITRYFMSIPEAARLVLQAAAMGNGGEIFVLDMGEPVKIADLARNMIRLSGFTEEEIHI  534
            P +TRYFM+IPEA+RLVLQA+A++ GGEIFVLDMG PVKI DLA+N+IRLSG+ EE+I I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  535  EFTGLRPGEKLYEELLA  551
            EF+G+R+GEKL+EELL 
Sbjct  535  EFSGIRSGEKLFEELLN  551

288) Cylst_4196 in NC_019757


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  322 bits (1209),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 223/498 (45%), Positives = 346/498 (70%), Gaps = 21/498 (4%)

Query  83   GFYRRYWRYASIEELTYIAILMVSAVFIQIMLFEAIHYIPNFSVNTLPQSLPLIDGFLSC  142
            ++Y+R W YAS+ EL    IL+V +V   I+    I  +P F+ ++    L +I   +  
Sbjct  63   DLYHRAWEYASVSEL----ILIVKSVTSSIVATGII--VPIFTQQAPFLRLYFITWMMHL  116

Query  143  IFIGGLRFSFRVVERVIQQKAVFSPRERVLIIGAGSAGVSLVQDMQRNPQLGFHAVAFID  202
            ++IGG R+S R+  + +  K   + +   LI+G+G +G  L+++M   P +G ++V  +D
Sbjct  117  LLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  203  DDPQKLNAHI-RGIPVVGDRYQIPDIVKSFQIHKVIIAMPMVAGKIIRETVDICKVTGTQ  261
            DD++K +  I  G+ V G   +IP++VK F+I K+IIA+P ++ + +RE   +C  T  +
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  262  TSTLPGIHEILNNPVRVDSIRDVRIEDLLRREPVQTNIERVFQFLLGKKVLITGSGGSIG  321
               +P I+++++  + V+ ++ V +EDLL R+PV+ ++  + + L  K +L+TG+GGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  322  SELCRQIFQCSPAEIILIGHGENSVFNIQQELEQLAHVLKTDNKGQRNTPRISTFIADIR  381
            SE+CRQ+ + +P  I+L+GHGENS+++I+QEL  L           ++   +  +IAD++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLY----------KEEIEVIPIIADVQ  344

Query  382  FQSRLEHAFEQFQPDVIFHAAAHKHVPLMELNPAEAITNNVIGTKNLIDLALQYNVKHFV  441
             + R+    + ++P V++HAAAHKHVPLME NP EAI NNV+GT+N  + A   +V  FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  442  MISTDKAVNPTNVMGASKRVAEMLVLQAAKQSGN-HYVAVRFGNVLGSRGSVVPTFKKQI  500
            M+STDKAVNP NVMGASKRVAEM++    +++++ ++VAVRFGNVLGSRGSV+P FKKQI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  501  ASGGPVTVTHPNITRYFMTIPEAVQLVLQAAVIGHGGEVLMMNMGEPVKIVDLAKELIHL  560
             +GGPVTVTHP +TRYFMTIPEA +LVLQA+ ++ GGE+++++MG PVKIVDLAK+LI+L
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  561  SGYEVNKDIDIVFTGLRP  578
            SGY  + DI+I F+G+R+
Sbjct  525  SGYK-EEDIGIEFSGIRS  541

289) Elen_2347 in NC_013204


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  322 bits (1208),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 237/501 (48%), Positives = 355/501 (71%), Gaps = 11/501 (2%)

Query  60   LFHLYNNLWEYASVDEAIQIVLAVVLSTLVGAVFLWIIDVRLP-IRVFFVSCFMLIFFMG  118
            +F+LY+  WEYASV E I IV +V  S +  ++++ I+  + P +R++F++  M ++++G
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  119  GIRLIFRVMRQKRRALVSTQRACDRPRTLVVGAGETGSLAIGRMASKDPLMPGIPIVATD  178
            G RL  R+ R   ++++S  +   +  TL+VG+G  GSL I +M +  P M   P++  D
Sbjct  121  GSRLSWRIYR---KTFIS--KEGKKKPTLIVGGGRGGSLLIRQMMN-TPYMGMEPVLVVD  174

Query  179  DDPTKRGSRI-HGVRVAGSTDDIVDLVDKHNIDQIVVAIPSSTPEERKRIYGECTKTDCK  237
            DD+ K+   I  GV+V G   DI +LV K NI +I++AIP+ + +  + I   C  T+  
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  238  LRTLPNVRELSLDEIgdvrlrdvdvadllgrEEIILNTRAVSGYIAGETVLVTGGGGSIG  297
            +  +PN+ ++  +EI   +L+ V+V DLLGR+ + L+  ++S  ++  T+LVTG+GGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SELCRQLCKVAPARIVIFDMYENDAYMLRNELLAEY-DDIDLVIEIGNVCDEARLNEVFA  356
            SE+CRQ+CK +P RI++++  EN  Y +++EL++ Y ++I+++  I++V D  R++ V  
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  KYRPGAVFHAAAHKHVPLMEQCPREALHNNVFGTLNavraadaygaaRFIFISTDKAVNP  416
             Y+P  V+HAAAHKHVPLME  P+EA+ NNV+GT N+  AA     ++F+ +STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  TSVMGATKRMGEMVMQYYAR-TSKTIFSAVRFGNVLGSNGSVIPVFQRQIAAGGPLTVTH  475
             +VMGA+KR++EMV+Q     TSKT F AVRFGNVLGS GSVIP+F++QI AGGP+TVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  476  PDIERFFMTIPEASRLVIQAGGMAKGGEIFILDMGEPVKIVDLAKGLIQLQGLTPDVDVK  535
            P++ R+FMTIPEASRLV+QAG++A GGEIF+LDMG PVKIVDLAK LI+L G   + D+ 
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIG  533

Query  536  IVFTGLREGEKMYEELLMDEE  556
            I F+G+R GEK++EELL  +E
Sbjct  534  IEFSGIRSGEKLFEELLNKDE  554

290) BC1002_0639 in NC_014117


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  321 bits (1205),  Expect = 7e-89, Method: Compositional matrix adjust.
 Identities = 226/541 (42%), Positives = 368/541 (69%), Gaps = 18/541 (3%)

Query  63   YGLYRGMWVFASLPDLVRiakaigvgalvvvigsal-lQPAPVVPRSVLIVSPMLLFLTM  121
            ++LY+  W +AS+++L+ I K++  + +   I  ++  Q AP +   + +++ M+ +L +
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  122  GGSR---ALYRAAKEFYRYGGLVGQGKPVLVLGAGNAGANLVRELKRSGQWRLVGLL--D  176
            GGSR    +YR +     + +  G+ KP L++G+G +G+ L+R++  +    +  +L  D
Sbjct  120  GGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  177  DDPIKQGREI-YGYRVVGAISDLQKICAELKVEHVIIAVPSASVEAHRRIATLCVRAGVR  235
            DD+ KQ   I  G +V G I D+  +   +++  +IIA+P+ S +  R I  LC  + V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  236  AMTLPALTPLTQGQAFLSRVRQIDLEDLLGRDPVTIDTEHVAALLKNRVVMVTGAGGSIG  295
               +P +  +  G+  +++++++++EDLLGRDPV +D   ++  L ++ ++VTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  296  SELCRQILRFGPVQLVAFDISEFSIYRLNEELRDKY-PEVSVVPLVGDVKDSLLLDQVMA  354
            SE+CRQ+ +F P +++ ++ +E SIY++++EL + Y  E+ V+P+++DV+D   + +VM 
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  355  RYCPHIVFHAAAYKHVPLMEEVNTWQAVRNNVLGTYRVARAAIRHDVAHFVLISTDKAVN  414
             Y P +V+HAAA KHVPLME  N  +A++NNVLGT   A AA   +V+ FV++STDKAVN
Sbjct  355  AYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  415  PTNVMGASKRLAEMACSALQQQGARRTQFETVRFGNVLGSAGSVIPKFQEQIARGGPVTV  474
            P NVMGASKR+AEM   +++++ ++ T+F +VRFGNVLGS GSVIP F+ QI  GGPVTV
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSK-TDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  475  THPEITRFFMTIPEASQLVLQASSMGRGGEIFILDMGKPVRIADLAHDLIRLYGFTEEQI  534
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMGKPV+I DLA +LIRL G+ EE+I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  535  RVVFTGLRPGEKLYEELLADDETTTRTPHPKLRIAQAREVP-DSLIDNLLPWLMQHRVPA  593
             + F+G+R+GEKL+EELL  DE        K+  ++ + +  + L +++   L+++ V  
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRD  592

Query  594  D  594
            +
Sbjct  593  E  593

291) LBJ_4174 in NC_008511


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  321 bits (1205),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 217/488 (45%), Positives = 344/488 (71%), Gaps = 13/488 (2%)

Query  62   DIYRSIWVYASIHDLVEIIKVtllsslisttallFYNRFEQLSRMVPV--LDTLLLLSFL  119
            D+Y+  W YAS+ +L+ I+K    S + +   + ++ +   + R+  +  +  LLL++  
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG--  120

Query  120  CIRSFSWRVFRDQYILKKSKEEGLPTLILGAGKIGATLLSEIRRHNELKLNPIGFLDDNV  179
                +SWR++R  +I K +K    PTLI+G+G+ G+ L+ ++     + ++P+  +DD+ 
Sbjct  121  -GSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  180  QKIGAHIQ-GVPILAKIDQAEQMINRFGIKQVIIAISNPDGKLISRLIRSFESTDVK-FK  237
            +K    I  GV + + I +  +++++F IK++IIAI+    + +  + +  E+T+V  FK
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  238  ILPSLGSLFFDSPKLNQLREVQVEDLLGRPVVDLEVESIRSYLKGKSILITGAGGSIGSE  297
             +P++ ++  +   +N+L+ V+VEDLLGR  V+L++ SI   L  K+IL+TGAGGSIGSE
Sbjct  238  -MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQVAVFEPSRILLLDAAETPLYEIEYELGKKLQGQNIELVPIVADIKNLSRVSSIFEK  357
            +CRQV  F P RI+LL+ +E ++Y+I+ EL   L  ++IE++PI+AD+++  R+  + + 
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  358  HSPEVVFHSAAYKHVPMMEVNPTEAVMNNVLGTKNVADISRLSGVERFVLISTDKAVNPV  417
              P VV+H+AA KHVP+ME NP EA+ NNVLGT+N A+ ++L+ V +FV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  418  NIMGASKRAAELYLQHVSRET-KTKFITVRFGNVLGSNGSVIPRFREQIANGGPVTVTHP  476
            N+MGASKR AE+ +Q ++ ET KT F++VRFGNVLGS GSVIP F+ QI  GGPVTVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  477  DVIRYFMTIPEATQLVLQAGSMGECGEIFILEMGEPVKILNLAEEMIRLCGLRPHVDIPI  536
            ++ RYFMTIPEA++LVLQAG+++  GEIF+L+MG PVKI++LA ++IRL G + + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  537  QFTGLRPG  544
            +F+G+R+G
Sbjct  535  EFSGIRSG  542

292) LBL_4189 in NC_008509


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  321 bits (1205),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 217/488 (45%), Positives = 344/488 (71%), Gaps = 13/488 (2%)

Query  62   DIYRSIWVYASIHDLVEIIKVtllsslisttallFYNRFEQLSRMVPV--LDTLLLLSFL  119
            D+Y+  W YAS+ +L+ I+K    S + +   + ++ +   + R+  +  +  LLL++  
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG--  120

Query  120  CIRSFSWRVFRDQYILKKSKEEGLPTLILGAGKIGATLLSEIRRHNELKLNPIGFLDDNV  179
                +SWR++R  +I K +K    PTLI+G+G+ G+ L+ ++     + ++P+  +DD+ 
Sbjct  121  -GSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  180  QKIGAHI-QGVPILAKIDQAEQMINRFGIKQVIIAISNPDGKLISRLIRSFESTDVK-FK  237
            +K    I  GV + + I +  +++++F IK++IIAI+    + +  + +  E+T+V  FK
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  238  ILPSLGSLFFDSPKLNQLREVQVEDLLGRPVVDLEVESIRSYLKGKSILITGAGGSIGSE  297
             +P++ ++  +   +N+L+ V+VEDLLGR  V+L++ SI   L  K+IL+TGAGGSIGSE
Sbjct  238  -MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQVAVFEPSRILLLDAAETPLYEIEYELGKKLQGQNIELVPIVADIKNLSRVSSIFEK  357
            +CRQV  F P RI+LL+ +E ++Y+I+ EL   L  ++IE++PI+AD+++  R+  + + 
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  358  HSPEVVFHSAAYKHVPMMEVNPTEAVMNNVLGTKNVADISRLSGVERFVLISTDKAVNPV  417
              P VV+H+AA KHVP+ME NP EA+ NNVLGT+N A+ ++L+ V +FV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  418  NIMGASKRAAELYLQHVSRET-KTKFITVRFGNVLGSNGSVIPRFREQIANGGPVTVTHP  476
            N+MGASKR AE+ +Q ++ ET KT F++VRFGNVLGS GSVIP F+ QI  GGPVTVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  477  DVIRYFMTIPEATQLVLQAGSMGECGEIFILEMGEPVKILNLAEEMIRLCGLRPHVDIPI  536
            ++ RYFMTIPEA++LVLQAG+++  GEIF+L+MG PVKI++LA ++IRL G + + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  537  QFTGLRPG  544
            +F+G+R+G
Sbjct  535  EFSGIRSG  542

293) EGYY_08980 in NC_015738


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  321 bits (1204),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 239/499 (48%), Positives = 351/499 (71%), Gaps = 12/499 (2%)

Query  60   LFRMYNNLWEYASIDEAIQILLAVVLSTLAGAVFLWIIDVRLP-IRVFIASAILLVFLMG  118
            +F +Y+  WEYAS+ E I I+ +V  S +A ++++ I+  + P +R+++ + ++ ++L+G
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  119  GVRMVWRIMRGKRHQIAAGAPTDRPRTLIVGAGETGSLTINRMASKDPNMPGIPVVATDD  178
            G R+ WRI R     + +     +P TLIVG+G  GSL I +M +  P M   PV+  DD
Sbjct  121  GSRLSWRIYR---KTFISKEGKKKP-TLIVGGGRGGSLLIRQMMN-TPYMGMEPVLVVDD  175

Query  179  DPVKRGLRI-HGIKVAGSSDDIISLVDRYDIEQIVVAIPSATSEERKRIYAVCTQTNCSL  237
            D+ K+ + I  G+KV G   DI  LV +++I +I++AIP+ + +  + I  +C  TN  +
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  KTLPNIRDLCIDELGDVAFRDVDVVDLLGREEIVLDTRIASSYIAGETVLVTGGGGSIGS  297
              +PNI ++  +E+    ++ V+V DLLGR+ + LD    S  ++  T+LVTG+GGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  298  ELCRQLAKVAPACIVIFDIYENDAYMLRQELISEY-DDIDVVIEVGSVCDTSRVKELFER  356
            E+CRQ+ K +P  I++++  EN  Y ++QELI+ Y ++I+V+  ++ V D  R+K + + 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  357  YRPaavfhaaahkhvPLMEQCPREAVQNNVFGTLNVVRAADAFGVERFIFISTDKAVNPT  416
            Y+P  V+HAAAHKHVPLME  P+EA++NNV+GT N   AA    V +F+ +STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  417  SVMGATKRMGEMIVQYYAR-ASKTVFSAVRFGNVLGSNGSVIPLFKKQIAAGGPITVTHP  475
            +VMGA+KR++EM++Q     +SKT F AVRFGNVLGS GSVIPLFKKQI AGGP+TVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  476  DIERFFMTIPEATRLVIQAGGMAHGGEIFILDMGEPVKILDLAKNLIRLSG---ADVKIL  532
            ++ R+FMTIPEA+RLV+QAG++A GGEIF+LDMG PVKI+DLAKNLIRLSG    D+ I 
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIE  535

Query  533  FTGLRDGEKMYEELLMDEE  551
            F+G+R GEK++EELL  +E
Sbjct  536  FSGIRSGEKLFEELLNKDE  554

294) SYN_02670 in NC_007759


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  321 bits (1204),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 226/544 (42%), Positives = 362/544 (67%), Gaps = 27/544 (4%)

Query  69   YRMTWRYVGVSDLTNIMAAVMISDLVLMVASFPIPIPEFWHIQFPLEGYVKRIFIVDGVF  128
            Y+ +W Y +VS+L  I+ +V  S   ++ +++ +PI       F  ++   R++++  + 
Sbjct  65   YHRAWEYASVSELILIVKSVTSS---IVATGIIVPI-------FTQQAPFLRLYFITWMM  114

Query  129  SLFFIGGMRVAKRVYLEVIRGKKSVRTGKRTLILGAGNTGEMILRDMAKQRFSAFYPVGL  188
             L++IGG R++ R+Y   + +K + +  K TLI+G+G  G +++R+M +  + +  PV +
Sbjct  115  HLLLIGGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  189  LDNDTRKIGVYI-HGVKVLGRLGELRTLISRNDIEAVIIAIPSLNHKKLRVLYDSARRAG  247
            +D+D+ K  + I  GVKV G + ++  L+ + +I  +IIAIP+L++++LR +      + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  248  VKTIKFVPRIYNFERPEINLRALEDIAIEDLIGRQAITVDYEGIRDFLTGRSIMVTGAGG  307
            V  +K +P I N    EI++  L  + +EDL+GR+++ +D  +I   LT ++I+VTGAGG
Sbjct  233  VEVFK-MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  308  SIGSEIVTQVCSFSPSCLVLFDIDETELHNLGLKLQRLFPELSDRIQYVTGDVRDRGRLD  367
            SIGSEI  QVC F+P  ++L++ +E  + ++   L  L+ E  + I  + +DV+D+ R+ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIP-IIADVQDKERMK  350

Query  368  EVFRAYAPRIVFHAAAYKHVPMMESNPKEAVKVNIFGTHALAEAAKNYGVEKFIMISTDK  427
             V +AY P +V+HAAA KHVP+ME NP+EA+K N++GT+  AEAAK   V KF+M+STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  428  AVRPTSVMGATKRMAEHICRAFQEAGSGKEGGESTRYVSVRFGNVLGSRGSVLPLFLDQL  487
            AV P +VMGA+KR+AE + ++ ++  S       T +V+VRFGNVLGSRGSV+PLF  Q+
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETS------KTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  488  KHGGPLTITHRDMLRYFMTIPEAVSLVLQASTMGGGGEVFVLDMGEPVKILEVAEELVRL  547
              GGP+T+TH +M RYFMTIPEA  LVLQA++++ GGE+FVLDMG PVKI+++A +L+RL
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  548  QGLEPYK--DIEFEFTGLRPGEKLFEEILTAEEGTVASRHEKIFVARNSEKYSLDDLTPI  605
             G   YK  DI +EF+G+R+GEKLFEE+L  +E       EKI+ ++  +K   ++L   
Sbjct  525  SG---YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK-VQKIEKEELYNK  580

Query  606  LADF  609
            + DF
Sbjct  581  IDDF  584

295) GEM_2637 in NC_018513


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  320 bits (1201),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 226/538 (43%), Positives = 365/538 (68%), Gaps = 15/538 (2%)

Query  61   HVFGLYRGLWVFASLPDLMRISKavggggvivmigavmFQPSPIIPRsvllvsplmlfll  120
            ++F+LY+  W +AS+++L+ I K+V ++ V   I   +F   + + R  ++   + L+L+
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  121  mGGAR---ALYRATKEFYLYGGLVGQGKPVLVLGAGTAGASLARELSRSGEWRLVGLL--  175
             GG+R    +YR T     + +  G+ KP L++G+G +G+ L R++  +    +  +L  
Sbjct  120  -GGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  176  DDDVTKQGREI-YGYKVLGSFNDLKHWTDAMKVEYAIIAIPSATVETQRRVATLCVRAGI  234
            DDD  KQ   I  G KV G ++D+ +     ++   IIAIP+ + +  R +  LC  + +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  235  KAMVLPSLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSI  294
                +P++  +M+G+  +++++++++EDLLGRD+V +D + +   L  + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  295  GSELCRQILRFAPAQLVAFDLSEYAMYRLAEELRERFPDQ-PVLPIIGDAKDSLLLDQVM  353
            GSE+CRQ+ +F+P +++ ++ +E ++Y++ +EL   + ++  V+PII+D +D   + +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  354  SRYAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHGVRHFVLISTDKAV  413
              Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA    V  FV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  414  NPTNVMGASKRLAEMACQALQQTSGGTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTV  473
            NP NVMGASKR+AEM  Q++++ ++ T+F +VRFGNVLGS GSVIP F++QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  474  THPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLARDLIRLYGFSEGQI  533
            THP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+ E +I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  534  RIEFTGLRPGEKLYEELLADDETTTRTPHPKLRIARAREVP-DHLLDELLPWLMQNRV  590
             IEF+G+R+GEKL+EELL  DE        K+  ++ + +  ++L + +   L+++ V
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

296) wbiI in NC_014722


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  320 bits (1201),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 217/521 (42%), Positives = 357/521 (69%), Gaps = 16/521 (3%)

Query  61   RLLGLYRGMWVFASLPDLMRIAKAICFGAVLV-MVASVMIQPVPIIPRSVLAVSPMLLFL  119
            ++++LY+  W +AS+++L+ I K++  + V   ++ ++  Q  P++   +  ++ M+ +L
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLL  117

Query  120  GMGGAR---AIYRAAKEFYLYGGLVGQGKPVFVLGAGNAAASIVRELKRSGEWRLVGLL-  175
             +GG+R    IYR +     + +  G+ KP +++G+G +++ ++R++  +    +  +L 
Sbjct  118  LIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  176  -DDDPVKHGREL-YGYPVLGPISELKRFAAELKVGHVIIAIPSASVDAHRRIATACVRAG  233
             DDD+ K+   +  G  V G I ++  +   +++  +IIAIP+ S +  R I   C  + 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  IQAFVLPRLTALTQGQSPLSRVRQIDLEDLLGRDPVSIDTAHVEALLKGQVVMVTGAGGS  293
            ++ F +P +  +  G+  +++++++++EDLLGRDPV +D A +   L  + ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQILRFGPVQLIAFDLSEYAIYRLSEELHDHY-PDVSIKPVIGDAKDSLLLDQV  352
            IGSE+CRQ+ +F P +++ ++ +E +IY++ +EL + Y  ++ + P+I+D +D   + +V
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  353  MARYAPHIVFHAAAYKHVPLMEQLNAWQAIRNNVLGTYRVASAAIRHKVCRFVLISTDKA  412
            M  Y P +V+HAAA KHVPLME  N+ +AI+NNVLGT   A AA    V +FV++STDKA
Sbjct  353  MQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPTNVMGASKRMAEMVCQVLQQSTHVTKLETVRFGNVLGSAGSVIPKFQEQIARGGPVT  472
            VNP NVMGASKR+AEMV Q +++ T  T + +VRFGNVLGS GSVIP F+ QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  VTHPGITRFFMTIPEASQLVLQASSMGQGGEIFLLDMGQPVRIADLARDLIRLYGFNEDQ  532
            VTHPG+TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG+PV+I DLA++LIRL G++E++
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEED  531

Query  533  IKIVFTGLRPGEKLYEELLADEETTIRTPHPKLRIARARKV  573
            I I F+G+R+GEKL+EELL  +E        K+  ++ +K+
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKI  572

297) AM1_3626 in NC_009925


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  320 bits (1200),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 220/451 (49%), Positives = 322/451 (72%), Gaps = 16/451 (3%)

Query  143  QELERSPHIGLLPIAFVDDNPAKLNLRI-RGLPVVGNRNVIPDTIKSWHIQTVIIAMPSL  201
            +++  +P +G+ P+  VDD++ K ++ I  G+ V G  + IP+ +K  +I+ +IIA+P+L
Sbjct  157  RQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTL  216

Query  202  SGQSLRDIVALCQMTGVETLTLPAlqdvlvgqqdlqNSIREVQIEDLLRREPIQTDIQGV  261
            S Q LR+I  LC+ T VE + +P +++V+ G+ ++ N ++ V++EDLL R+P++ D+ ++
Sbjct  217  SQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEV-NKLKKVEVEDLLGRDPVELDMASI  275

Query  262  RQLLKGRRVLVTGAGGSIGSELCRQIFRCAPAELILLGHGENSVFQIQQELLQYQNHNGV  321
             + L  + +LVTGAGGSIGSE+CRQ+ + +P  ++LLGHGENS+++I+QEL+      G+
Sbjct  276  SKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELI------GL  329

Query  322  ASSDVSVPILRPFIADLRHPSRLRFAFEEYQPEVVFHAAAHKHVPLMENNAPEAVTNNVL  381
               ++ V    P+IAD+++  R++   + Y+P VV+HAAAHKHVPLME N+ EA+ NNVL
Sbjct  330  YKEEIEVI---PIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVL  386

Query  382  GTKALTDLAVEFGVQHFVMISTDKAVNPTNVMGASKRIAEMIVLK-AAQTSGLPFVVVRF  440
            GT+  ++ A    V  FVM+STDKAVNP NVMGASKR+AEM++     +TS   FV VRF
Sbjct  387  GTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRF  446

Query  441  GNVLGSRGSVIPTFKRQIAAGGPVTVTHPEICRYFMTIPEAVQLVLQAVVMSPGGEILML  500
            GNVLGSRGSVIP FK+QI AGGPVTVTHP + RYFMTIPEA +LVLQA  ++ GGEI++L
Sbjct  447  GNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVL  506

Query  501  NMGEPVKIVDLAKDLICLSGYQVGKDIEIAYTGLRPGEKLFEELFLPDEEYQKTGHEKLL  560
            +MG PVKIVDLAK+LI LSGY+   DI I ++G+R+GEKLFEEL+  DE       EK+ 
Sbjct  507  DMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIY  565

Query  561  VVKNASQNIPS-QLLQHVADLLQSASINDSM  590
              +   Q+I   +L + + D+L + S+ D +
Sbjct  566  --RGKVQKIEKEELYNKIDDFLINESVRDEI  594

298) capD in NC_012526


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  319 bits (1198),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 203/440 (47%), Positives = 316/440 (72%), Gaps = 5/440 (1%)

Query  129  RARLRSSPQRQRVLIVGAGEAGTLIAREMQRHPEAGLDAIGFLDDEPGKIRKRLL-GLPV  187
            ++ +    +++  LIVG+G +G+L+ R+M   P  G++++  +DD++ K +  +  G+ V
Sbjct  131  KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  188  FGRVDDLVDVAKREEAQEILIAVPSATGDFVRHVVDLARDAELRYRIIPGVFEILSGDVN  247
             G + D+ ++ K+ + + I+IA+P+ + + +R++  L  ++++    +P + +++SG+++
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  248  LQQIRDVNLEDLLRRPPVQLNTNEIAGYLRGRVVLVTGAGGSIGSELVRQLVSFTPAKIL  307
            +++++ V++EDLL R PV+L+   I+  L  + +LVTGAGGSIGSE+ RQ+  FTP +I+
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  308  LFGRGENSIFGIQQELIRNW-PDIDQVGLIGDVRDEARLRAVFERYRPEVIFHAAAHKHV  366
            L+G+GENSI+ I+QELI     +I+ + +I+DV+D  R++ V + Y+P V++HAAAHKHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  367  PLMEETPSEAILNNVIGTQNVVELCLEFGVGRLVNVSTDKAVNPTSIMGASKRVAEMVVS  426
            PLME  P EAI NNV+GT+N  E      V+++V VSTDKAVNP ++MGASKRVAEMV+ 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  427  AGAARAREGQAFVSVRFGNVLGSRGSVVPTFMAQIRAGGPITVTHPEMVRYFMTIPEAAR  486
            +    +   + FV+VRFGNVLGSRGSV+P F  QI AGGP+TVTHP M RYFMTIPEA+R
Sbjct  431  SMNNETSKTD-FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASR  489

Query  487  LVLQAGGLAENGKVYVLNMGDPVKISDLAHDVIRLSGAR--NVDVVYSGIRPGEKLYEEL  544
            LVLQAG+LA  G ++VL+MG PVKI DLA ++IRLSG +  ++++ +SGIR+GEKL+EEL
Sbjct  490  LVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEEL  549

Query  545  LTSGEGVGATTHSEIYSAQL  564
            L  +E         IY +++
Sbjct  550  LNKDEIHPEQVYEKIYRGKV  569

299) LRC_00890 in NC_015975


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  319 bits (1195),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 244/551 (45%), Positives = 370/551 (68%), Gaps = 34/551 (6%)

Query  74   LYNSLWQFASFDELNRIISSSVITTVFQMLFMTCLIVRMP-VSYYIFGALIQFAMIVGIR  132
            LY+  W++AS  EL  I+ S   + V   +++  +  + P +  Y++  ++++ +I G R
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  133  FSYR-YINLERNRRYNTNAAIHNVMVIGAGAAGKTILREMRNSQGMTGKACCVIDDNPNK  191
            +S R Y    R+   + ++     +++G+G +G  ++R+M N+  M   +  V+DD++NK
Sbjct  124  LSWRIY----RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  192  WDRTME-GVPVVGGRDAILSAVKKYSIDQIMFAIPSASTEDKRDILNICKETKCELKSLP  250
               ++  GV V G    I   VKK++I +I++AIP+ S +  R+I ++C  T+ E+  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  251  GIYQLANGEVSLSKMKAVNVEDLLGRDPIKVDMAEVFRQLTGKTILVTGGGGSIGSELCR  310
             I ++ +GE+ ++K+K V+VEDLLGRDP+ +DMA + ++LT KTILVTG+GGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  311  QIAAHNPKQLIIFDIYENNAYDIQQELVRKYGDKLNLVTLIGSVRDSRRLDMIFDKYRPD  370
            Q+    P ++++++  EN+ Y+I+QEL+  Y + ++++ +I+ V+D  R+  + + Y+P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  371  IVYHAAAHKHVPLMEASPNEAIKNNVIGTYKTTYMALKYGVEKFVLISTDKAVNPTNIMG  430
            +VYHAAAHKHVPLME +P+EAIKNNV+GT +T+  A    V KFV++STDKAVNP N+MG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  431  ASKRLCEMVIQSMERISENDNFDSLPLLHDHKKDGLKEEKPKATKTKFVAVRFGNVLGSN  490
            ASKR+ EMVIQSM+                            ++KT FVAVRFGNVLGS 
Sbjct  420  ASKRVAEMVIQSMNN--------------------------ETSKTDFVAVRFGNVLGSR  453

Query  491  GSVIPLFKKQIAEGGPVTVTHPDIIRYFMTISEAVSLVLQAGTYAKGGEIFVLDMGSPVK  550
            GSVIPLFKKQI  GGPVTVTHP++ RYFMTI+EA  LVLQAG+ A GGEIFVLDMG PVK
Sbjct  454  GSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVK  513

Query  551  IDTLARNLIKLSGHEPDVDIPIVYTGLRSGeklyeeklmkeeglkktkNELIFIGQPIPF  610
            I  LA+NLI+LSG   + DI I ++G+RSGEKL+EE L K+E       E I+ G+   +
Sbjct  514  IVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKI  572

Query  611  DMDNFFKDLEN  621
            + +++++ +++
Sbjct  573  EKEELYNKIDD  583

300) Mfla_1278 in NC_007947


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  318 bits (1191),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 219/492 (45%), Positives = 348/492 (71%), Gaps = 17/492 (3%)

Query  132  MGGSRFAYRAWKEHR-LYGSAQFSGKPVLVLGAGEAAIALLKDLSKSR--EWHVVGLLDD  188
            +GGSR++   W+  R  + S +   KP L++G+G ++  L++++ ++     + V ++DD
Sbjct  119  IGGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  189  KKTMHGRELL-GVNVLGSIAQLPQIAADLSVNHVIVAMPSARHQRRREIVELASRNGLTA  247
                +   +  GV+V G I ++P++   ++++ +I+A+P+  +QR REI  L     +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  248  LTVPSFDDLMSGHLSMAQIRPVEVEDLLGREPVSLDGEGLQHLIEGQVLLITGAGGSIGS  307
            + +P+++++MSG++ + +++ VEVEDLLGR+PV LD  ++   +  + +L+TGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  308  ELCRQVLKYRPACLVCLDQSEYALYRLEQEFDNLEFDTRIEYV--VGDVRNARRVGQVLG  365
            E+CRQV K+ P  ++ L+++E ++Y+++QE+  L +   IE +  ++DV++  R+ +V+ 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL-YKEEIEVIPIIADVQDKERMKKVMQ  354

Query  366  RYMPKLVFHAAAYKHVPLMENRNVAESLSNNVSGTYTLAQACKTAGVAKFVLISTDKAVN  425
             Y P +V+HAAA KHVPLME  N  E++ NNV GT   A+A K A V+KFV++STDKAVN
Sbjct  355  AYKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  426  PTNVMGASKRLAEMICQGLQEESG-TRFIVVRFGNVLGSSGSVIPKFREQIAAGGPITVT  484
            P NVMGASKR+AEM+ Q++++E++ T F+ VRFGNVLGS GSVIP F+ QI AGGP+TVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  485  HPEITRYFMSIPEACQLVMQAGLMGGGGEIFVLDMGDPVRIVDLARDMIRLSGLNEDDIQ  544
            HP +TRYFM+IPEA +LV+QAG ++ GGEIFVLDMG PV+IVDLA+++IRLSG +E+DI 
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIG  533

Query  545  IVYSGLRPGEKLYEELLADDELTVPTPHDKLRIAVARSVDGAWVQALLKWIDRASLIDES  604
            I +SG+R+GEKL+EELL  DE+      +K+  +  + ++    + L + ID   LI+ES
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEK---EELYNKID-DFLINES  589

Query  605  VIKQELGMWVEE  616
            V ++E+   V++
Sbjct  590  V-RDEIIFFVNN  600

301) yveM in NC_014614


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  318 bits (1193),  Expect = 6e-88, Method: Compositional matrix adjust.
 Identities = 247/539 (46%), Positives = 376/539 (70%), Gaps = 39/539 (7%)

Query  67   LFGLYRSLWRYASINEMMSIALAALWSNIATYITFLLLDVNMP--RSFYIINMFTMAAFV  124
            +F+LY+  W YAS++E++ I  +   S +AT I   ++  + P  R ++I  M  +  ++
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL-LI  119

Query  125  GGLRFSYRVLRRIEMGKLQTNKLNRPLSKVLIIGAGEAGVMTAKELLRTP--DMNKVLVG  182
            GG R+S R+ R+  ++K   +K        LI+G+G +G +  ++++ TP  +M+ VLV 
Sbjct  120  GGSRLSWRIYRKTFISKEGKKK------PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-  172

Query  183  FVDDDSnkigkkingiPIVADISSGVKF---LDDVDEIILAM---------PSITHKRRK  230
             VDDDSNK             I+SGVK    + D+ E++            P+++++R +
Sbjct  173  -VDDDSNKQKM---------SIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLR  222

Query  231  EIIEIYKDSGVKMKILPGIYELIDGQVDIKKIRDVDIEDLLGRDSIALDNTKIAEDIKNK  290
            EI  +  ++ V +  +P I +++ G+++++K++ V++EDLLGRD++ LD + I+ ++ +K
Sbjct  223  EINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHK  282

Query  291  ivivtggggsigsELCRQIAGFSPKLLIIFDIYENSVYDIQNELKSKY-PTLPLKVLIGS  349
             ++VTG+GGSIGSE+CRQ+  F+P  +++++  ENS+Y+I++EL + Y   + +  +I+ 
Sbjct  283  TILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIAD  342

Query  350  VRDVNRLDEIFLKYRPQLVFHAAAHKHVPLMEDSPFEAIKNNTVGTKNISEIAGKYEVQR  409
            V+D +R+  +   Y+P +V+HAAAHKHVPLME +P EAIKNN +GT+N +E A   EV +
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  410  FVLISTDKAVNPTNIMGASKRLAELVIQDMNKKYS-TEYVAVRFGNVLGSNGSVIPLFKK  468
            FV++STDKAVNP N+MGASKR+AE+VIQ MN+  S T++VAVRFGNVLGS GSVIPLFKK
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  469  QIEKGGPITVTHPDIIRYFMTIPEAVQLVLQAGSMAKGGEIFILDMGEPVKIVDLAEDLI  528
            QIE GGP+TVTHP++ RYFMTIPEA +LVLQAG++A GGEIF+LDMG PVKIVDLA +LI
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  529  RLSGFEPYEDINIEFTGLRPGeklfeelllaeegilDTKHEKIFVGK--PFDKDDDFTR  585
            RLSG+   EDI IEF+G+R+GEKLFEELL  +E   +   EKI+ GK   ++K++ + +
Sbjct  523  RLSGYKE-EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNK  580

302) capD in NC_005824


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  318 bits (1194),  Expect = 6e-88, Method: Compositional matrix adjust.
 Identities = 212/487 (44%), Positives = 343/487 (71%), Gaps = 13/487 (2%)

Query  62   DIYRSIWVYASIHDLVEIIKVtllsslisttallFYNRFEQLSRMVPV--LDTLLLLSFL  119
            D+Y+  W YAS+ +L+ I+K    S + +   + ++ +   + R+  +  +  LLL++  
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG--  120

Query  120  CIRSFSWRVFRDQYILKKSKEEGLPTLILGAGKVGATLLSEIRRHNELKLNPVGFLDDNV  179
                +SWR++R  +I K +K    PTLI+G+G+ G+ L+ ++     + ++PV  +DD+ 
Sbjct  121  -GSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  180  QKIGAHIQ-GIPILAKIDQAEQIINRFGVKQVIIAMSSPDGKLISRLIRSFEHTDVK-FK  237
            +K    I  G+ + + I +  +++++F +K++IIA+++   + +  + +  E T+V  FK
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  238  ILPSLGSLFFDSPKLNQLREVQVEDLLGRPVVDLEIESIRSYLKGKSILVSGAGGSIGSE  297
             +P++ ++  +   +N+L+ V+VEDLLGR  V+L++ SI   L  K+ILV+GAGGSIGSE
Sbjct  238  -MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQVAVFEPSRILLLDSAETPLYEIEYELGKKLQGQNIELVPIVADIKNLSRISSIFEK  357
            +CRQV  F P RI+LL+ +E ++Y+I+ EL   L  ++IE++PI+AD+++  R+  + + 
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  358  HSPEVVFHSAAYKHVPMMEINPTEAVMNNVLGTKNIADISRISGVERFVLISTDKAVNPV  417
              P VV+H+AA KHVP+ME NP EA+ NNVLGT+N A+ ++++ V +FV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  418  NIMGASKRAAELYLQHISRET-RTKFITVRFGNVLGSNGSVIPRFREQIANGGPVTVTHP  476
            N+MGASKR AE+ +Q ++ ET +T F++VRFGNVLGS GSVIP F+ QI  GGPVTVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  477  DVIRYFMTIPEATQLVLQAGSMGECGEIFILEMGEPVKILNLAEEMIRLCGLRPHVDIPI  536
            ++ RYFMTIPEA++LVLQAG+++  GEIF+L+MG PVKI++LA ++IRL G + + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  537  QFTGLRP  543
            +F+G+R+
Sbjct  535  EFSGIRS  541

303) LB_170 in NC_004343


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  318 bits (1194),  Expect = 6e-88, Method: Compositional matrix adjust.
 Identities = 212/487 (44%), Positives = 343/487 (71%), Gaps = 13/487 (2%)

Query  62   DIYRSIWVYASIHDLVEIIKVtllsslisttallFYNRFEQLSRMVPV--LDTLLLLSFL  119
            D+Y+  W YAS+ +L+ I+K    S + +   + ++ +   + R+  +  +  LLL++  
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG--  120

Query  120  CIRSFSWRVFRDQYILKKSKEEGLPTLILGAGKVGATLLSEIRRHNELKLNPVGFLDDNV  179
                +SWR++R  +I K +K    PTLI+G+G+ G+ L+ ++     + ++PV  +DD+ 
Sbjct  121  -GSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  180  QKIGAHIQ-GIPILAKIDQAEQIINRFGVKQVIIAMSSPDGKLISRLIRSFEHTDVK-FK  237
            +K    I  G+ + + I +  +++++F +K++IIA+++   + +  + +  E T+V  FK
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  238  ILPSLGSLFFDSPKLNQLREVQVEDLLGRPVVDLEIESIRSYLKGKSILVSGAGGSIGSE  297
             +P++ ++  +   +N+L+ V+VEDLLGR  V+L++ SI   L  K+ILV+GAGGSIGSE
Sbjct  238  -MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQVAVFEPSRILLLDSAETPLYEIEYELGKKLQGQNIELVPIVADIKNLSRISSIFEK  357
            +CRQV  F P RI+LL+ +E ++Y+I+ EL   L  ++IE++PI+AD+++  R+  + + 
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  358  HSPEVVFHSAAYKHVPMMEINPTEAVMNNVLGTKNIADISRISGVERFVLISTDKAVNPV  417
              P VV+H+AA KHVP+ME NP EA+ NNVLGT+N A+ ++++ V +FV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  418  NIMGASKRAAELYLQHISRET-RTKFITVRFGNVLGSNGSVIPRFREQIANGGPVTVTHP  476
            N+MGASKR AE+ +Q ++ ET +T F++VRFGNVLGS GSVIP F+ QI  GGPVTVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  477  DVIRYFMTIPEATQLVLQAGSMGECGEIFILEMGEPVKILNLAEEMIRLCGLRPHVDIPI  536
            ++ RYFMTIPEA++LVLQAG+++  GEIF+L+MG PVKI++LA ++IRL G + + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  537  QFTGLRP  543
            +F+G+R+
Sbjct  535  EFSGIRS  541

304) LIF_B140 in NC_017552


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  318 bits (1194),  Expect = 6e-88, Method: Compositional matrix adjust.
 Identities = 212/487 (44%), Positives = 343/487 (71%), Gaps = 13/487 (2%)

Query  62   DIYRSIWVYASIHDLVEIIKVtllsslisttallFYNRFEQLSRMVPV--LDTLLLLSFL  119
            D+Y+  W YAS+ +L+ I+K    S + +   + ++ +   + R+  +  +  LLL++  
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG--  120

Query  120  CIRSFSWRVFRDQYILKKSKEEGLPTLILGAGKVGATLLSEIRRHNELKLNPVGFLDDNV  179
                +SWR++R  +I K +K    PTLI+G+G+ G+ L+ ++     + ++PV  +DD+ 
Sbjct  121  -GSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  180  QKIGAHIQ-GIPILAKIDQAEQIINRFGVKQVIIAMSSPDGKLISRLIRSFEHTDVK-FK  237
            +K    I  G+ + + I +  +++++F +K++IIA+++   + +  + +  E T+V  FK
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  238  ILPSLGSLFFDSPKLNQLREVQVEDLLGRPVVDLEIESIRSYLKGKSILVSGAGGSIGSE  297
             +P++ ++  +   +N+L+ V+VEDLLGR  V+L++ SI   L  K+ILV+GAGGSIGSE
Sbjct  238  -MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQVAVFEPSRILLLDSAETPLYEIEYELGKKLQGQNIELVPIVADIKNLSRISSIFEK  357
            +CRQV  F P RI+LL+ +E ++Y+I+ EL   L  ++IE++PI+AD+++  R+  + + 
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  358  HSPEVVFHSAAYKHVPMMEINPTEAVMNNVLGTKNIADISRISGVERFVLISTDKAVNPV  417
              P VV+H+AA KHVP+ME NP EA+ NNVLGT+N A+ ++++ V +FV++STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  418  NIMGASKRAAELYLQHISRET-RTKFITVRFGNVLGSNGSVIPRFREQIANGGPVTVTHP  476
            N+MGASKR AE+ +Q ++ ET +T F++VRFGNVLGS GSVIP F+ QI  GGPVTVTHP
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  477  DVIRYFMTIPEATQLVLQAGSMGECGEIFILEMGEPVKILNLAEEMIRLCGLRPHVDIPI  536
            ++ RYFMTIPEA++LVLQAG+++  GEIF+L+MG PVKI++LA ++IRL G + + DI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  537  QFTGLRP  543
            +F+G+R+
Sbjct  535  EFSGIRS  541

305) FMG_1137 in NC_010376


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  318 bits (1192),  Expect = 8e-88, Method: Compositional matrix adjust.
 Identities = 231/526 (44%), Positives = 350/526 (67%), Gaps = 28/526 (5%)

Query  61   MYKVMWRYATFEDYL--KAGVYTAIASVGSSMFLIVVKSTLPRSSFLIALVFEVILIFVV  118
            +Y   W YA+  + +    +V ++I + G  + ++  ++ + R  ++I+ + +++LI   
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRL-YFITWMMHLLLIGGS  122

Query  119  RM--------FARTQTDKKSTVETKIEGQVNSMVIgagaagvlvvREMLKHPEMKSKPVC  170
            R+        F   +  KK+T+     G+  S++I          R+M++ P M   PV 
Sbjct  123  RLSWRIYRKTFISKEGKKKPTLIVG-GGRGGSLLI----------RQMMNTPYMGMEPVL  171

Query  171  IIDDDNTKINKSI-SSVPVVGNTSDIVKKAHEYNVEEIILAIPTIDSDRKKQILNECEKL  229
            ++DDD+ K + SI S+V V G   DI      +N+  II+AIPT+  +R ++I + CE  
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  230  NAKVKIMPGYYEFIDSKVDLKDLRDVQIEDLLGRDQVVLDKEILNEFLNNKVVMVTGAGG  289
            N  V  MP   + + + ++++ L+ V++EDLLGRD V LD   ++  L +K ++VTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  290  SIGSELCRQILKYKPKKLVMLDIYENTTYDIQNEILR-NDPNAPIDVIIESIRNFDRMNA  348
            SIGSE+CRQ+ K+ P ++++L+  EN+ Y+I++E++     +  +  II  +++ +RM+ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  349  LFGIHKPDVVFHAAAHKHVPLMEHSPQAAVLNNVFGTKNIIDCCDIHNVKKFVLISTDKA  408
            +    KP VV+HAAAHKHVPLME +PQ A+ NNV+GT+N  +   + +V KFV++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  409  VNPTSVMGCTKRICELLVQS-KNQVSKTEYVAVRFGNVLGSNGSVIPLFKKQIQEGGPVT  467
            VNP +VMG +KR+ E+++QS +N+ SKT++VAVRFGNVLGS GSVIPLFKKQI+ GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  468  VTHKDIIRYFMTIPEACQLVMQAGAMAEGGEIFVLDMGDPVKIVDLAKKLIKLSGLELDK  527
            VTH ++ RYFMTIPEA +LV+QAGA+A GGEIFVLDMG PVKIVDLAK+LI+LSG   + 
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EE  530

Query  528  DIKIEFTGLRPGEKLYEETLIEANNISKTKYDMIFVEEPVVHDIEK  573
            DI IEF+G+R+GEKL+EE L   +  +   Y+ I+     V+ IEK
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK--VQKIEK  574

306) Deima_2963 in NC_014958


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  317 bits (1189),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 211/447 (48%), Positives = 315/447 (71%), Gaps = 5/447 (1%)

Query  136  QRQRVLIVGAGDAGSLIAREMQRHPEAGLEPIGFLDDEPRKIRGRVV-GLPVFGPIDDLV  194
            +++  LIVG+G +GSL+ R+M   P  G+EP+  +DD++ K +  +  G+ V G I D+ 
Sbjct  139  KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIP  198

Query  195  TVAKREQAQEILIAVPSADGQFVRRVVSLARDTGLRYRIIPGMFEILSSDVTISQIRDVN  254
             + K+ + + I+IA+P+   Q +R +  L  +T +    +P + +++S+++ +++++ V+
Sbjct  199  ELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVE  258

Query  255  LEDLLRRPPVRLNTAEIASYLKGRVILVTGAGGSIGSEIIRQLAVFGPSTVLLFGRGENS  314
            +EDLL R PV L+ A I+  L  + ILVTGAGGSIGSEI RQ+  F P  ++L+G+GENS
Sbjct  259  VEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENS  318

Query  315  IFSIQQELLRTW-PEIEQVGLIGDVRDAARLRAVFERYRPEVVFHAAAHKHVPLMEEAPS  373
            I+ I+QEL+     EIE + +I+DV+D  R++ V + Y+P VV+HAAAHKHVPLME  P 
Sbjct  319  IYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQ  378

Query  374  EAILNNVIGTQNVVDLCLEFGVSRLVNISTDKAVNPTSVMGASKRVAEMVVSagaarard  433
            EAI NNV+GT+N  +      VS++V +STDKAVNP +VMGASKRVAEMV+ +    +  
Sbjct  379  EAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSK  438

Query  434  aqaFVSVRFGNVLGSRGSVVPTFMAQIRAGGPITVTHPEMVRYFMTIPEAARLVLQAGGL  493
            ++ FV+VRFGNVLGSRGSV+P F  QI AGGP+TVTHP M RYFMTIPEA+RLVLQAG+L
Sbjct  439  TD-FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  494  AENGKVYVLDMGEPVKIADLAHDVIRLSGAW--NVDVVYSGIRPGEKLYEELLTTSEGAD  551
            A  G ++VLDMG PVKI DLA ++IRLSG    ++++ +SGIR+GEKL+EELL   E   
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

Query  552  ATTHSEIFSARLAQVNEYQIIDNVQAL  578
                  I+ +++ +++  ++ ++++ +
Sbjct  558  EQVYEKIYRGKVQKIEKEELYNKIDDF  584

307) TVNIR_1899 in NC_019902


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  317 bits (1190),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 219/526 (42%), Positives = 363/526 (70%), Gaps = 10/526 (1%)

Query  66   FGLYRGIWRFASVPDLMRILRAVWVGAATTILLLFLLRRVGDVPRAVLLVYPVFLTMGLT  125
            F+LY+  W +ASV++L+ I+++V  +  +T +++ ++ + +   R  ++   + L + + 
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLL-IG  120

Query  126  APRLFYRWFKDHFQPKGSRRR-ALIVGAGWSGDLLVRELIKSREYL---PVGFLDDDPRK  181
            ++RL  R ++  F +K ++++ +LIVG+G++G LL+R+++++  Y+   PV  +DDD+ K
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLVVDDDSNK  179

Query  182  LGRDL-HGVPVLGSVGeldrllreldVEMVLIAMPTADARLMRRIVDVAAHEGVACVTLP  240
                +  GV V G + ++  L++ +++  ++IA+PT   + +R I  +     V    +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  241  SLRELADGRVEVSRLREVEIDDLLGREVITLDDAGLHAFLEGKRVLVTGAGGSIGSELCR  300
            ++ ++  G +EV++L+ VE++DLLGR+ + LD A++   L  K +LVTGAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  301  QVAQYGPERVVMLDHAEYGLYSIERDMQRL-PSPVDFTPVLGDVTDAVRMREVFASFRPD  359
            QV ++ P+R+++L+H+E ++Y I++++  L    ++  P+++DV D  RM+ V  +++P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  360  IVLHAAAYKHVPLLEDNAVEGVKVNVLGTRMVADLAATHGCEKFVLVSTDKAVRPTNVMG  419
            +V HAAA KHVPL+E N+ E++K NVLGTR  A+ A      KFV+VSTDKAV P NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  420  ASKRVAELYCQSVG-EADGTAFMVTRFGNVMGSAGSVVPLFRRQIAEGGPVTVTHPDITR  478
            ASKRVAE+  QS+  E+  T F+  RFGNV+GS GSV+PLF++QI  GGPVTVTHP++TR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  479  YFMTIPEAVSLILQAASMGAAGEVFVLDMGKPIRIRDLAEEMIRLSGHEPGRDIDVAFIG  538
            YFMTIPEA  L+LQA++++++GE+FVLDMGKP++I DLA ++IRLSG     DI++ F G
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSG  538

Query  539  LRPGeklheelfheheNPVGTSHPKILRAEARKVSAQWLVPRLGSL  584
            +R+GEKL EEL++ +E        KI R+  +K+  + L  +++ +
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

308) RBR_04740 in NC_021013


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  316 bits (1185),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 227/538 (43%), Positives = 354/538 (66%), Gaps = 28/538 (5%)

Query  65   YSKLWRYFNAKDYIVCGTAVFSGF-TLGFVISLFLQIPQ--RKIFC--IVHFAIALVGIL  119
            Y + W Y +  + I+   +V S++ + G+++++F Q +   R  F   ++H+ +   + L
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRL  124

Query  120  AFRFVFRRTFLDLTEAGRAEGGERTLIVGAGNAGRMIVREIHNAKEQGDVNNPSKSIIPV  179
            + R ++R+TF+     ++      TLIVG+G +G +++R++        +N P  ++ PV
Sbjct  125  SWR-IYRKTFI-----SKEGKKKPTLIVGGGRGGSLLIRQM--------MNTPYMGMEPV  170

Query  180  CFVDDDLKKLNQKIEGIPIVGTC-PEIVKICDEYRIDNIIVAVPSCEEDEKRKILDYCSA  238
              VDDD +K +  I +   V  C  +I  +   + I +II+A+P+  ++  R I   C +
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  239  TECKIKIIPYLGELLFDDGHTQLISQAKEIKIEDLLGRKPIEFDRKEIHDLINGKICLVT  298
            T+  +  +P + +++   G+ + +++ K + +EDLLGR P+E+D   I   +  K  LVT
Sbjct  231  TNVEVFKMPNIENVM--SGEIE-VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  299  GGGGSIGSELVRQIAKNDPKQIIIVDIYENNAYDIQQELVLEYGTKLNLVTLISSVRDYD  358
            G+GGSIGSE+ RQ+ K  P +I++++  EN+ Y+I+QEL+  Y   ++++ +I+ V+D +
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKE  347

Query  359  KMELIFKTYRPELVFHAAAHKHVPLMETVPEEAVKNNIFGTFNVATLAEKYKAKKFVMIS  418
            +M  + ++Y+P +V+HAAAHKHVPLME  P+EA+KNN++GT N A  A      KFVM+S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  419  TDKAVNPTNVMGATKRACEMIIQYKAQHSTATEFVTTRFGNVLGSNGSVIPLFRRQIENG  478
            TDKAVNP NVMGA+KR  EM+IQ   ++++ T+FV+ RFGNVLGS GSVIPLF++QIE G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  479  APVTVTHPDIIRYFMTIPEAVSLVLEAGAMAKGGEIFVLDMGAPVKITTLAENLIRMYGK  538
            +PVTVTHP++ RYFMTIPEA  LVL+AGA+A GGEIFVLDMG PVKI  LA NLIR+ G 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG-  526

Query  539  VPYK--DVPIIFTGLRPGEKLFEELLMDEEGLKSTQNKKIFIGNQIKIDETDMLSKLE  594
              YK  D+ I F+G+R+GEKLFEELL  +E        KI+ G+  KI+  ++ +K++
Sbjct  527  --YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

309) Pcar_1536 in NC_007498


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  315 bits (1182),  Expect = 5e-87, Method: Compositional matrix adjust.
 Identities = 216/504 (43%), Positives = 347/504 (69%), Gaps = 13/504 (2%)

Query  81   WRYVSIPDLLQILK--ANVVASFGVVLYAVFIREMNNLPRSVIILDFLVCFMTMIGVRVL  138
            W Y S+++L+ I+K  ++ + + G+++ ++F ++   L   + ++  ++ ++ + G R+ 
Sbjct  69   WEYASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLR--LYFITWMMHLLLIGGSRLS  125

Query  139  VRILREQRRQLTKSYRRKKKSVLVVGSGIVAQTIVREMRENPKM-LKAVLGFIDRDQGRK  197
             RI R  +  ++K    KKK+ L+VG+G  +  ++R+M + P M + +VL   D  + +K
Sbjct  126  WRIYR--KTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQK  181

Query  198  GKVFNGIPVLGTLDDMAKICGKNDIDLIIVAESSVQPKELRNIVAFCKENKIESKILPAM  257
              + +G+ V G + D++ +  K +I  II+A +++  + LR+I  +C   ++E   +P +
Sbjct  182  MSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNI  241

Query  258  GDIISGQVSLQHCREVRLEDLLGRPPIRLDVEEINNYLHGKRVLVTGAAGSIGSEICRQV  317
             +++SG++ ++  + V +EDLLGR P+ LD+  I++ L  K +LVTGA+GSIGSEICRQV
Sbjct  242  ENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  318  AQFGPGNLVMFENAETPLFHLENELREKF-PGLSLIPSLSDIRDQTRVSQVFKKHRPQVV  376
             +F P+ ++++ ++E +++H+++EL   +   + +IP ++D++D+ R+ +V +  +P VV
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  377  FHAAAYKHVPMSEINPVQVVKNNVLGTRNIIDASFDIGAEHFVLISTDKAVNPTNIMGTT  436
            +HAAA KHVP+ E NP + +KNNVLGTRN  +A+       FV++STDKAVNP N+MG++
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  437  KRVAEMYAQSLPRNGSTKA-TTVRFGNVLGSHGSVIPIFREQILKGGPVTVTHPEITRFF  495
            KRVAEM  QS+  + S     +VRFGNVLGS+GSVIP+F+ QI  GGPVTVTHP +TR+F
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  496  MTIPEAVQLVLQAGCMGYGGEIFLLDMGEPVKIIRLAEEMIRLSGRRPYEDIEITFTGLR  555
            MTIPEA +LVLQAG ++ GGEIF+LDMG PVKI+ LA ++IRLSG +  EDI I F+G+R
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIEFSGIR  540

Query  556  AGEKLFEELLIDGEGIKPTVHEKI  579
            +GEKLFEELL  +E     V EKI
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKI  564

310) LSL_0995 in NC_007929


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  315 bits (1181),  Expect = 6e-87, Method: Compositional matrix adjust.
 Identities = 232/531 (44%), Positives = 368/531 (70%), Gaps = 13/531 (2%)

Query  75   LYKSIWKYVSLSEMNRILLATIVTAIFHGIGITVLCTRMP-ISYYLMGPLFQFMFTVSVR  133
            LY   W Y S+SE+  I+ +   + +  GI + ++  + P +  Y++  + ++++  + R
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  134  FAYRFINLVRRRKQRNENAKYNSLiigagsagqiiiKELENSSVAQSVPKCVIDDDPNKW  193
            ++ R+    R+    +E  K  +LI+G+G +G ++I+++ N++     P  V+DDD+NK 
Sbjct  124  LSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK-  179

Query  194  GRM--LKNIPIIGGREKIIEAVQKFDITQIIFTIPSASAKDKREILNICKETDCKLLTLP  251
             +M     + + G    I E V+KF+I +II++IP+ S +  REI ++C  T+  ++ +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  252  GVYQLLNEEVFLQHLKPVAVEDLLGREPIKADLGQIKKQIQGKVVLITGGGGSIGSELCR  311
             + ++++ E+ ++ LK V VEDLLGR+P+  D++ I K++  K +L+TG+GGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  312  QIATYDPKQLIVFDIYENNAYSIEQELKRNY-PNLNLKVLIGSVRDQKRVDDIFSSYRPD  370
            Q+  + P ++++++  EN+ Y I+QEL   Y  ++++  +I+ V+D+ R+  +  +Y+P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  371  IVYHAAAHKHVPLMEGSPNEAVKNNVVGTYNTSKAALKYNAERFVLISTDKAVNPTNAMG  430
            +VYHAAAHKHVPLME +P+EA+KNNV+GT NT+ AA   +  +FV++STDKAVNP N MG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  431  ASKRICEMIIQMMDKDSRNRKKRTQFVAVRFGNVLGSNGSVIPLFKKQIAAGGPVTVTHP  490
            ASKR+ EM+IQ M++++     +T+FVAVRFGNVLGS GSVIPLFKKQI AGGPVTVTHP
Sbjct  420  ASKRVAEMVIQSMNNET----SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  491  DIIRYFMTISEAVGLVLQAGAYAAGGEIFVLDMGQPIKIDTLARNLIKLSGLHPDEDIEI  550
            ++ RYFMTI+EA  LVLQAGA A+GGEIFVLDMG+P+KI  LA+NLI+LSG   +EDI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG-YKEEDIGI  534

Query  551  KYIGLRPGEKLYEEKLMAEEGLQKTENQLIYIGKPIPFDEKKFLKNLQNLI  601
             + G+R+GEKL+EE L  +E       + IY GK   ++   + +++++++
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

311) Mmol_1039 in NC_012968


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  315 bits (1180),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 221/509 (44%), Positives = 350/509 (69%), Gaps = 33/509 (6%)

Query  63   FGLYRGVWRFASVNDLKRIflavsfasvllaafffMVKTNIVIPRSVlvldp--------  114
            F+LY+  W +ASV++L           ++ +    +V T I++P                
Sbjct  62   FDLYHRAWEYASVSEL---------ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITW  112

Query  115  lllilAMGGSRFAYRAWKEHVLYGTTL--KQGE--PVIVLGAGDAAIALVKDLARSTQWR  170
            ++ +L +GGSR++   W+   +Y  T+  K+G   P +++G+G ++  L++++  +    
Sbjct  113  MMHLLLIGGSRLS---WR---IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  171  VVALL--DDDVTMLGREV-FGVKVRGNIQQLASICSHLSVNYVIVAMPSVHHQKRREAIE  227
            + ++L  DDD       +  GVKV+G I++++ +   ++++ +I+A+P++ +Q+ RE   
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  228  FANALGLEVMTVPAIDDLMSGKVSVSQIRKVDVEDLLGRDSVKLDSSGLQMLIDQKVVMV  287
            + ++  +EV  +P I+++MSG + V++++KV+VEDLLGRD+V LD +++   + +K ++V
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  288  SGAGGSIGSELCRQIVKYQPSTLICLDISEFSLYQLEQELSAL-NLPTRLIYLTGDVKNH  346
            +GAGGSIGSE+CRQ+ K+ P  ++ L+ +E S+Y+++QEL +L +    +I + +DV++ 
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDK  346

Query  347  TRMHHVLAQHQPSVVFHAAAYKHVPMMENGNVWEALSNNVIGTYTIAQACKDHGVSKFVL  406
             RM  V+   +P VV+HAAA KHVP+ME     EA+ NNV+GT   A+A K   VSKFV+
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQ-EAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  407  ISTDKAVNPTNVMGASKRLAEMVCQGLQSEAG-TRFVIVRFGNVLGSSGSVIPKFREQIA  465
            +STDKAVNP NVMGASKR+AEMV Q++++E++ T FV VRFGNVLGS GSVIP F+ QI 
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIE  465

Query  466  KGGPITITHPEITRYFMSIPEAAQLVMQAGLMGKGGEIFVLDMGEPVKITDLALDMIRLS  525
             GGP+T+THP +TRYFM+IPEA++LV+QAG ++ GGEIFVLDMG PVKI DLA ++IRLS
Sbjct  466  AGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLS  525

Query  526  GFSADEIKIEYVGLRPGEKLYEELLADDE  554
            G+  ++I IE+ G+R+GEKL+EELL  DE
Sbjct  526  GYKEEDIGIEFSGIRSGEKLFEELLNKDE  554

312) MPQ_1724 in NC_014733


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  314 bits (1178),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 215/502 (43%), Positives = 359/502 (72%), Gaps = 18/502 (3%)

Query  76   FGLYRGVWRFASLPDLKRILFavataaatvvavIFMT--KPHGVIPRSVLI--LDPMLLV  131
            F+LY+  W +AS+++L  IL+  + +++ V + I++     ++ + R  +I  +  +LL+
Sbjct  62   FDLYHRAWEYASVSEL--ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  132  LGMGGSRFLYRYWKEHR-LYGAFHSQGQPVLLLGAGTSAINLLKDLTRSQ--EWRVVGML  188
               GGSR+    W+  R  + + +++ +P L++G+G ++  L++++  +       V ++
Sbjct  120  ---GGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  189  DDDEAMHGRQLL-GVKVLGNIDDIGYFSRRYQVEHVIVAMPSASHQQRRAAVEKANAHAL  247
            DDD   +   +  GVKV G I DI  + +++++  +I+A+P+ S+Q+ R      ++  +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  248  TILTVPSVEDLMNGKVSISQIRRVEVEDLLGREPVQLDTEGMHALLQAQVVMVSGAGGSI  307
             ++ +P++E++M+G + ++++++VEVEDLLGR+PV+LD  ++   L  + ++V+GAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  308  GSELCRQILAFKPAKLICLDISEFALYKLEQEFSAMSNRPADIEYVVGDVKNAERLRHLL  367
            GSE+CRQ+  F P +++ L+ +E ++Y ++QE+ ++ +   ++  +++DV++ ER++ ++
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  368  QQTKPAVIFHAAAYKHVPMMETGNVSEALHNNVLGTYTLASLAKEAGVAKFVLISTDKAV  427
            Q  KP V++HAAA KHVP+ME  N  EA+ NNVLGT   A  AK A V+KFV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  428  NPTNVMGASKRLAEMVCQGLQENHG-TRFVIVRFGNVLGSSGSVIPKFREQIAKGGPVTV  486
            NP NVMGASKR+AEMV Q+++++ + T FV VRFGNVLGS GSVIP F+ QI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  487  THPDITRYFMSIPEATQLVMQAGLMGKGSEIFVLDMGESVKIADLARDMIKLSGLQDDEI  546
            THP++TRYFM+IPEA++LV+QAG ++ G+EIFVLDMG +VKI DLA+++I+LSG ++++I
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  547  EIIFTGLRPGEKLYEELLADDE  568
             I F+G+R+GEKL+EELL  DE
Sbjct  533  GIEFSGIRSGEKLFEELLNKDE  554

313) Msip34_1724 in NC_012969


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  314 bits (1179),  Expect = 8e-87, Method: Compositional matrix adjust.
 Identities = 217/507 (43%), Positives = 361/507 (72%), Gaps = 18/507 (3%)

Query  71   VFFVNFGLYRGVWRFASLPDLKRILFavataaatvvavIFMT--KPHGVIPRSVLI--LD  126
            VF   F+LY+  W +AS+++L  IL+  + +++ V + I++     ++ + R  +I  + 
Sbjct  57   VFAQIFDLYHRAWEYASVSEL--ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMM  114

Query  127  PMLLVLGMGGSRFLYRYWKEHR-LYGAFHSQGQPVLLLGAGTSAINLLKDLTRSQ--EWR  183
             +LL+   GGSR+    W+  R  + + +++ +P L++G+G ++  L++++  +      
Sbjct  115  HLLLI---GGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  184  VVGMLDDDEAMHGRQLL-GVKVLGNIDDIGYFSRRYQVEHVIVAMPSASHQQRRAAVEKA  242
             V ++DDD   +   +  GVKV G I DI  + +++++  +I+A+P+ S+Q+ R      
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  243  NAHALTILTVPSVEDLMNGKVSISQIRRVEVEDLLGREPVQLDTEGMHALLQAQVVMVSG  302
            ++  + ++ +P++E++M+G + ++++++VEVEDLLGR+PV+LD  ++   L  + ++V+G
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  303  AGGSIGSELCRQILAFKPAKLICLDISEFALYKLEQEFSAMSNRPADIEYVVGDVKNAER  362
            AGGSIGSE+CRQ+  F P +++ L+ +E ++Y ++QE+ ++ +   ++  +++DV++ ER
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  363  LRHLLQQTKPAVIFHAAAYKHVPMMETGNVSEALHNNVLGTYTLASLAKEAGVAKFVLIS  422
            ++ ++Q  KP V++HAAA KHVP+ME  N  EA+ NNVLGT   A  AK A V+KFV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  423  TDKAVNPTNVMGASKRLAEMVCQGLQENHG-TRFVIVRFGNVLGSSGSVIPKFREQIAKG  481
            TDKAVNP NVMGASKR+AEMV Q+++++ + T FV VRFGNVLGS GSVIP F+ QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  482  GPVTVTHPDITRYFMSIPEATQLVMQAGLMGKGSEIFVLDMGESVKIADLARDMIKLSGL  541
            GPVTVTHP++TRYFM+IPEA++LV+QAG ++ G+EIFVLDMG +VKI DLA+++I+LSG 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  542  QDDEIEIVFTGLRPGEKLYEELLADDE  568
            ++++I I F+G+R+GEKL+EELL  DE
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDE  554

314) HN6_00820 in NC_017481


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  313 bits (1175),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 230/514 (45%), Positives = 359/514 (70%), Gaps = 13/514 (2%)

Query  75   LYKSIWKYVSLSEMNRILLATIVTAIFHGIGITVLCTKMP-ISYYLMGPLFQFMFTVSVR  133
            LY   W Y S+SE+  I+ +   + +  GI + ++  + P +  Y++  + ++++  + R
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  134  FAYRFINLVRRRKQRNENAKYNSLiigagsagqiiiKELENSSVVQSVPKCVIDDDPNKW  193
            ++ R+    R+    +E  K  +LI+G+G +G ++I+++ N++ +   P  V+DDD+NK 
Sbjct  124  LSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK-  179

Query  194  GRM--LKNIPIIGGREKIIEAVQKFDITQIIFTIPSASAKDKREILNICKETDCKLLTLP  251
             +M     + + G    I E V+KF+I +II++IP+ S +  REI ++C  T+  ++ +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  252  GVYQLLNEKVFLQHLKPVAVEDLLGREPIKADLGQIKQQIQGKVVLITGGGGSIGSELCR  311
             + ++++  + ++ LK V VEDLLGR+P+  D++ I +++  K +L+TG+GGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  312  QIATYDPEQLIVFDIYENNAYSIEQELKRNY-PNLNLKVLIGSVRDQKRVDDIFSSYRPD  370
            Q+  + P+++++++  EN+ Y I+QEL   Y  ++++  +I+ V+D+ R+  +  +Y+P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  371  IVYHAAAHKHVPLMEGSPNEAVKNNVVGTYNTSKAALKHNAERFVLISTDKAVNPTNAMG  430
            +VYHAAAHKHVPLME +P+EA+KNNV+GT NT+ AA   +  +FV++STDKAVNP N MG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  431  ASKRICEMIIQMMDKDSRNSKKRTQFVAVRFGNVLGSNGSVIPLFKKQIAAGGPVTVTHP  490
            ASKR+ EM+IQ M++++     +T+FVAVRFGNVLGS GSVIPLFKKQI AGGPVTVTHP
Sbjct  420  ASKRVAEMVIQSMNNET----SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  491  DIIRYFMTISEAVGLVLQAGAYAAGGEIFVLDMGQPIKIDTLARNLIKLSGLHPDEDIKI  550
            ++ RYFMTI+EA  LVLQAGA A+GGEIFVLDMG+P+KI  LA+NLI+LSG   +EDI I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG-YKEEDIGI  534

Query  551  KYIGLRPGEKLYEEKLMAEEGLQKTENQLIYIGK  584
             + G+R+GEKL+EE L  +E       + IY GK
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

315) Calni_0125 in NC_014758


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1170),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 216/464 (47%), Positives = 331/464 (72%), Gaps = 9/464 (1%)

Query  124  RLFKESYGKFLGEKVTKKRVLIVGAGSAGQMIAREIKDNDKLHAEVVGFVDDDERKIKTR  183
            R+++ +   F++    KK  LIVG+G +G ++ R++ +   +  E V  VDDD  K K  
Sbjct  127  RIYRKT---FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  184  IL-GIPVIGSTKEIPIIAKDDEIDEIVIAIPSASKEEMQRIVEKCREAAVG-YKIIPGFG  241
            I  G+ V G  K+IP + K  +I  I+IAIP+ S++ ++ I   C  + V  +K+ P + 
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM-PNIE  242

Query  242  EILEGKLSVNRIRDVEIEDLLGRPPIKLKLAEIEQYLKDKVVLVTGAGGSIGGEIARQVS  301
            +++ G + VN+++ VE+EDLLGR P+ L +A I + L +K +LVTGAGGSIG+EI RQV 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  302  RYSPKNLIILDIAETPLFFIENYLKSS-KNDLNLTTIIGDVKNIVKMEQLFKSYKPDIVI  360
            +++P  +++L+ +E +++ I++ L +  K+++++  II+DV++  +M ++ ++YKP +V 
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  361  HAAAYKHVPMMELNPDEAIWNNIFGTKVIADLSCKYEVDKFILISTDKAVNPTNIMGATK  420
            HAAA KHVP+ME NP+EAI NN++GT+  A+ +   EV KF+++STDKAVNP N+MGA+K
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  421  RIAELYIKTFPDDL-KTKFIIVRFGNVLGSNGSVIPIFKEQIKNGGPVTVTHPEVTRYFM  479
            R+AE+ I++  ++  KT F+ VRFGNVLGS GSVIP+FK QI  GGPVTVTHP +TRYFM
Sbjct  423  RVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFM  482

Query  480  TIPEAVQLVLQAGGIGKGGELFLLDMGEPVKILKLAEEMIRLSNFEPYKEIDIVFTGLRP  539
            TIPEA +LVLQAG+++ GGE+F+LDMG PVKI+ LA ++IRLS +    +I+I F+G+R+
Sbjct  483  TIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIEFSGIRS  541

Query  540  GeklyeellldeeGSTKTEYDKIWIAKQQPIDKDIVLNVINDLL  583
            GEKL+EELL  +E      Y+KI  +K Q I+K+ + N I+D+L
Sbjct  542  GEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

316) Alvin_3100 in NC_013851


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1170),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 219/519 (43%), Positives = 346/519 (67%), Gaps = 18/519 (3%)

Query  65   FGLYRGVWRFASLNDLVRIalavlvgtalllfvlfalNRMAYVPRSLPVLFV--IFQLML  122
            F+LY+  W +AS+++L+ I  +V  +     +++  + + A     L + F+  + +L+L
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQA---PFLRLYFITWMMHLLL  118

Query  123  LAGPRL---LYRWLKDRRLDFSGGQR--VLIVGAGRAGEMLVRDLLRDRQCGYVPVAFVD  177
            ++G+RL   +YR    + +    G++   LIVG+GR+G +L+R+++     G  PV  VD
Sbjct  119  IGGSRLSWRIYR----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  178  DKPRRQG-GVVHGVPIRGTTDDIPRLVELFGIDVILLSVPSASAQQMQRLVGLCEAAGRP  236
            D + +Q  ++  GV ++G   DIP LV  F I  I++++P+ S Q+++ +  LCE++   
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  237  FRTVPQTKELMAGRVAVNQLRAVSIEDLLGRDPVTLDWASIEQGLAGRVVLVSGAGGSIG  296
               +P+  ++M+G + VN+L+ V +EDLLGRDPV LD ASI + L+ + +LV+GAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  297  SELCRQLCRCAPRLLILVDHSEYNLYRIETELLDG-PEPPPLSRHLIDVTNATALDRLFA  355
            SE+CRQ+C+ +P  ++L++H+E ++Y+I+ EL++   E   +   + DV +   + ++  
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  356  QRRPDVVFHAAAYKHVPLLQDQVLAALDNNVLGTRTIAAAADAWGCERFVLISTDKAVNP  415
              +P VV+HAAA KHVPL++ +   A+ NNVLGTR  A AA      +FV++STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  TNVMGASKRFAELICQDMQRRSA-CRFMTVRFGNVLGSAGSVVPRFQQQIERGGPLTVTH  474
             NVMGASKR AE++ Q M+  ++   F++VRFGNVLGS GSV+P F++QIE GGP+TVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  475  PEIERFFMTIPEACQLIMQAAVIGQGGETFVLDMGEPVKIRYLAEQMIRLSGREPGRDIR  534
            P + R+FMTIPEA +L++QA+ ++ GGE FVLDMG PVKI  LA ++IRLSG     DI 
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIG  533

Query  535  IEYTGLRPGEKLYEELFYPTEGFADTPHPRIHIARCAEI  573
            IE++G+R+GEKL+EEL+   E  ++    +I  ++   I
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKI  572

317) BMA1976 in NC_006348


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

318) BMA10229_A2767 in NC_008836


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

319) BMA10247_1838 in NC_009080


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

320) BMASAVP1_A0937 in NC_008785


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

321) wbiI in NC_017831


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

322) BURPS1106A_3127 in NC_009076


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

323) wbiI in NC_007434


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

324) BURPS668_3090 in NC_009074


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

325) BPC006_I3171 in NC_018527


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

326) wbiI in NC_006350


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

327) BDL_2774 in NC_021884


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

328) GBP346_A3270 in NC_012695


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1171),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 233/543 (43%), Positives = 368/543 (68%), Gaps = 25/543 (4%)

Query  64   HVFGLYRGLWVFASLPDLLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSP-----M  118
            ++F+LY+  W +AS+++L+ I K+V ++  IV  G +    VPI+ +    L       M
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSS--IVATGII----VPIFTQQAPFLRLYFITWM  113

Query  119  LLFLAMGGAR---ALYRATKEFYLYGGLIGQGKPVlilgagsagaslarelsrsGEWRLA  175
            + +L +GG+R    +YR T     + +  G+ KP LI+G+G +G+ L R++  +    + 
Sbjct  114  MHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  176  GLL--DDDPAKHGREV-YGYKVLGSIGevadwaeaakaeyaiiaiPSASVEAQRRFATLC  232
             +L  DDD+ K+   +  G KV G I ++++     +    IIAIP+ S +  R +  LC
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  VRAGVRAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTG  292
              + V    +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  293  AGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLL  351
            AGGSIGSE+CRQ+ KF P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  352  LDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAIRHDVRHFVLIS  411
            + +VM  Y P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++S
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  412  TDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKG  471
            TDKAVNP NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  472  GPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGF  531
            GPVTVTHP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA++LIRL G+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  532  TEEQIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTAKAREVP-DHLLDELLPWLMQ  590
             EE+I IEFSG+R+GEKL+EELL  DE        K+  +K + +  ++L + +   L++
Sbjct  528  KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLIN  587

Query  591  HRV  593
            + V
Sbjct  588  ESV  590

329) ebA5907 in NC_006513


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1170),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 207/516 (41%), Positives = 353/516 (69%), Gaps = 20/516 (3%)

Query  65   FGLYRGVWRFASLTDLAKIVQAV---LIGTTLLLAILFVFNRMAYVPRSLPMLFV--VYQ  119
            F+LY+  W +AS+++L  IV++V   +++T ++++I   F + A     L + F+  + +
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPI---FTQQA---PFLRLYFITWMMH  115

Query  120  IMLLAGPRLMYRWVKDRRI---DPGTGKRVLIVGAGSDGEMLVRDLLQDRDAGYLPIAFV  176
            ++L++G+RL   W   R+      G  K  LIVG+G +G +L+R++++    G  P+  V
Sbjct  116  LLLIGGSRL--SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  177  DDHHQRLGRTV-HGVPIRGTIDELPKVVDVFGIDLVLLAKPNATARQMQHMVDLCEATGK  235
            DD+ ++   ++  GV ++G I ++P +V  F I  +++A P  + ++++++  LCE+T  
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  236  PFRTVPPTKDLVAGRVAAGQLRQVSIEDLLGRDPVSLDWVGIRRSLSDHVVLVSGAGGSI  295
                +P   ++++G +   +L++V +EDLLGRDPV LD  +I + L++  +LV+GAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  296  GSELCRQLCRCNPRLLILIDHSEFNLYSIETELLE-SPDAPPIARHLLSVTDAVGVRQVF  354
            GSE+CRQ+C+  P  ++L++H+E ++Y I+ EL+    +   +   +  V D   +++V 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  355  ERYRPQVVFHAAAYKHVPLLEDQVEAAVRNNVVGTQVMaqaaaacacERFVLISTDKAVN  414
            + Y+P VV+HAAA KHVPL+E + + A++NNV+GT+  A+AA      +FV++STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  415  PTNVMGATKRLAELICQAQDSRAG-SRFMTVRFGNVLGSAGSVVPRFQRQIERGGPVTVT  473
            P NVMGA+KR+AE++ Q+ ++ ++ + F++VRFGNVLGS GSV+P F++QIE GGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  474  HPDIERFFMTIPEACQLIMQAAAIGDDADTFVLDMGEPVKIRYLAEQMILLSGRQPGRDI  533
            HP++ R+FMTIPEA +L++QA+A++ +++ FVLDMG PVKI  LA ++I LSG +   DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DI  532

Query  534  RIEYTGLRPGEKLYEDLFYPAEIFADTPHPRIHIAR  569
             IE++G+R+GEKL+E+L+   EI ++    +I  ++
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

330) Ccur_05820 in NC_013170


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  312 bits (1168),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 239/504 (48%), Positives = 353/504 (71%), Gaps = 11/504 (2%)

Query  57   FFAAFRLYNDLWEYASVDDALRITFTVGLSTLVTAVFLWLAGQWIP-IRVYVAALIIMVF  115
            F   F LY+  WEYASV + + I  +V  S + T++++ +  Q  P +R+Y  + ++ ++
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLL  117

Query  116  FVGGSRMFFRVLRSKRREIERAHADEERPRTLIVGAGETGSLAIMRMASKDPQMPGEPIV  175
            ++GGSR+  R+ R  +  I +   +  +  TLIVG+G  GSL I +M +  P M  EP++
Sbjct  118  LIGGSRLSWRIYR--KTFISK---EGKKKPTLIVGGGRGGSLLIRQMMN-TPYMGMEPVL  171

Query  176  AVDDDKKKRNLRV-HGVRVAGTSEDIIELVERFGIEQIVVAIPSASINDRKRIYSICTQT  234
             VDDD +K+++ +  GV+V G   DI ELV +F I +I++AIP+ S +  + I  +C  T
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  235  TCQLRTLPNVRELKLDEINDIALRDVNVADLLGREEVVLNTRLVSGYIAGKTILVTGGAG  294
              ++  +PN+ ++  +EI+   L+ V+V DLLGR+ V L+   +S  ++ KTILVTG++G
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  295  SIGSELCRQMCPVAPARIVVFDMWENDAYLLKRSIQEQY-DDIDVQVEIGNICDESRLRD  353
            SIGSE+CRQ+C  +P RI++++  EN  Y + + +   Y ++I+V   I+++ D  R++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  354  VFEKYhpaavfhaaahkhvpLMEMCPREAIQNNIFGTLNTVRLAHEFGVARFIFISTDKA  413
            V + Y P  V+HAAAHKHVPLME  P+EAI+NN++GT NT   A    V++F+ +STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  414  VNPTSVMGATKRMGEMIIQH-YAQKSNTVFAAVRFGNVLGSNGSVIPIFKKQIKEGGPVT  472
            VNP +VMGA+KR++EM+IQ    + S+T F AVRFGNVLGS GSVIP+FKKQI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  473  VTDPGIERFFMTIPEASRLVIQAGGMATGGEIFILDMGEPVKIVDLARALIQLSGLEVGK  532
            VT+PG+ R+FMTIPEASRLV+QAG++ATGGEIF+LDMG PVKIVDLA+ LI+LSG     
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EE  530

Query  533  DIEIVYTGLRPGEKMYEELLMNEE  556
            DI I ++G+R+GEK++EELL ++E
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDE  554

331) M301_1256 in NC_014207


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  310 bits (1161),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 204/463 (45%), Positives = 331/463 (72%), Gaps = 15/463 (3%)

Query  122  GGSRFAYRAWKE-HSLYGVAKSLGKPTIILGAGDAAVALLKDLSRSTQWRVVGML----D  176
            GGSR++   W+  +  +    +  KPT+I+G+G ++  L++++  +    +  +L    D
Sbjct  120  GGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  177  DDKALLGREIFGVKVLGSIATLADMQRRLGVEHVIVAMPSAHHQKRRSAIDLANNLGLEV  236
             +K  ++    GVKV G I  ++++ +++ +  +I+A+P+  +Q+ R    L +   +EV
Sbjct  177  SNKQKMSIAS-GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  237  LTVPAIDDLMSGKVSVSQIRKVDVEDLLGRDAVLLDNSGLRHLIAEHAVMVSGAGGSIGS  296
            + +P I+++MSG + V++++KV+VEDLLGRD+V LD +++   +++ +++V+GAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  297  ELCRQILNFSPSALICFDISEFSLYQLEQELSAL-NLTTKLLFMTGDVKNKQRVKSLLEQ  355
            E+CRQ+ +F+P  ++ ++ +E S+Y+++QEL +L +    ++ + +DV++K+R+K +++ 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  356  FQPAVVFHAAAYKHVPMMENGNVWEALSNNVIGTHTIANACKEAGVEKFVLISTDKAVNP  415
            ++P VV+HAAA KHVP+ME  N  EA+ NNV+GT+  A+A K A V KFV++STDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  TNVMGASKRLAEMVCQGLQEKLAREAMGTRFVIVRFGNVLGSSGSVIPKFREQIAKGGPV  475
             NVMGASKR+AEMV Q++++  ++    T FV VRFGNVLGS GSVIP F+ QI  GGPV
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSK----TDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  476  TITHPEITRYFMSIPEAAQLVLQAGLMGKGGEILVLDMGEPVKIAALAADMIRLSGLQAD  535
            T+THP +TRYFM+IPEA++LVLQAG ++ GGEI+VLDMG PVKI  LA ++IRLSG + +
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE  530

Query  536  EVKIEYVGLRPGEKLYEELLADDEHTMPTPHEKLRIAQAREVD  578
            ++ IE+ G+R+GEKL+EELL  DE       EK+  ++ + ++
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

332) capD in NC_016002


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  310 bits (1163),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 213/491 (44%), Positives = 340/491 (70%), Gaps = 18/491 (3%)

Query  100  VMARIGPFPRSSIVIFWVFAMAYIGGSRFLLRGLVRRIDAVDSPREHVIIYGAGRAGIQL  159
            + ++ +PF R  ++  W+  +  IGGSR+  R   + + + ++ +   +I G+GR+G  L
Sbjct  97   IFTQQAPFLRLYFIT-WMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGG-SL  154

Query  160  MLALQAGREYRPMA---FVDDNPALWRHTF-RGLAVHA-PAELPALLTDTEAKAILLALP  214
            ++       Y  M     VDD++   + ++  G+ V++   ++P L+   + K I++A+P
Sbjct  155  LIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIP  214

Query  215  SVSRARQREILEKL-ESLHVPIKRLPGMAELVSGEVRVEELKRVDIEDLLGRDPVPPRPE  273
            ++S+ R REI +KL E+ +V + ++P + +++SGE+ V+ LK+V++EDLLGRDPV     
Sbjct  215  TLSQQRLREI-NKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMA  273

Query  274  LLARNIEGRVVMVTGAGGSIGSELCRQIVRQRPARLILFELSEFALYAIDQELKAL-APQ  332
             +++++  + ++VTGAGGSIGSE+CRQ+ +  P R++L+  +E ++Y I+QEL +L   +
Sbjct  274  SISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE  333

Query  333  LECLPLLGSVTDYERLFRVIDGFGVQTVFHAAAYKHVPLVEHNPLAGIRNNAFGTDVCAQ  392
            +E +P+++ V D ER+ +V++++    V+HAAA KHVPL+E NP  +I+NN +GT   A+
Sbjct  334  IEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAE  393

Query  393  AAEDGGVDTFVLISTDKAVRPTNVMGATKRLAELCLQTRHARGSRTRFVMVRFGNVLGSS  452
            AA  + V  FV++STDKAV P NVMGA+KR+AE+ +Q+ +   S+T FV VRFGNVLGS 
Sbjct  394  AAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSR  453

Query  453  GSVVPLFKKQIAAGGPVTVTHPEITRYFMTIPEAAQLVIQAGAMGEGGDVFVLDMGEPVK  512
            GSV+PLFKKQI AGGPVTVTHP +TRYFMTIPEA++LV+QAGA++ GG++FVLDMG PVK
Sbjct  454  GSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVK  513

Query  513  IAELARRMVHLSGLTVKDESRPDGDIEIRFSGLRPGEKLYEELLIGDNVLPTD-HPRILR  571
            I +LA+ +++LSG         + DI I FSG+R+GEKL+EELL  D++ P +   +I R
Sbjct  514  IVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYR  566

Query  572  AQEYHLDEDVL  582
            ++   ++ + L
Sbjct  567  GKVQKIEKEEL  577

333) capD in NC_014323


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  310 bits (1161),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 209/492 (43%), Positives = 333/492 (68%), Gaps = 18/492 (3%)

Query  123  ILLLLFVGASRALA-RVWLGDQYLSILKQASRPKVLIYGAGSTGRQLVAAMASSHEMQVV  181
            ++ LL++G+SR L+ R+     ++S  K++ +   LI G+G  G  L+  M ++  M + 
Sbjct  113  MMHLLLIGGSR-LSWRIY-RKTFIS--KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  182  GFL---DDDDRLHGHVLNGQPIYNP-ADLSSLASTLSISNVLLAMPSLSRKRRNEILAQI  237
              L   DD ++    + +G  +     D++ L   ++I ++++A+P+LS++R  EI    
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  238  RTARVAVRTLPSVTDLAQGRVNVSDLRELDIDDLLGREPVMPNHILLAMNVRSKVVMVTG  297
              + V V  +P++ ++  G ++V+ L+ ++++DLLGR+PV  +   ++ ++  K ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  298  AGGSIGSELCRQILAVGPSKLLLIEQSEFALYAIHQQLEEKLADRDIVLVPLLASVQDSE  357
            AGGSIGSE+CRQ+    P +++L+ ++E ++Y IHQ+L   L   +I ++P++A VQD E
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEVIPIIADVQDKE  347

Query  358  RIREIMSTWHPDTVYHAAAYKHVPLVEHNPAEGIKNNVLGTLRTAQAATENGVADFVLIS  417
            R++ +M +  P  VYHAAA KHVPL+E NP E+IKNNVLGT  TA+AA    V+ FV++S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  418  TDKAVRPTNIMGASKRLAEMVLQAIAATSPGTKFSMVRFGNVLGSSGSVVPKFRQQIRDG  477
            TDKAV P N+MGASKR+AEMV+Q++   ++ T F  VRFGNVLGS GSV+P F++QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  478  GPITLTHADITRYFMTIPEASQLVIQAGAMAKGGDVFVLDMGQAVRIMDLARRMIELSGL  537
            GP+T+TH+++TRYFMTIPEAS+LV+QAGA+A GG++FVLDMG++V+I+DLA+ +I LSG 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  538  TVKDELNPEGDIAIEITGLRPGEKLYEELLIGDNPKPTS-HSRIMKAHEEFIPWAELEAR  596
                    E DI+IE++G+R+GEKL+EELL  D+  P     +I ++  + I   EL  +
Sbjct  528  K-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNK  580

Query  597  LSALEMALNVND  608
            +  + +  +V D
Sbjct  581  IDDFLINESVRD  592

334) K734_02850 in NC_021286


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  309 bits (1159),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 214/490 (44%), Positives = 339/490 (70%), Gaps = 20/490 (4%)

Query  111  LVAFLLTGGSRL---IVREGYQRAMSRQKDRVMIYGAGSAGRQLAQALANGD--EFHPVM  165
            ++ +LL GGSRL   I R  +    +++K  +++ G+G +G  L + + N      +PV+
Sbjct  113  MMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIV-GGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  166  FIDDDSGLQNTSVL-GLKVTGPEGIACAVRELDVQRILLALPSTLRSRRRQILDSL-EQL  223
             +DDDS  Q+ S+  G+KV G       +      + ++   +TL  +R + ++ L E  
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  224  PVKVQTVPGMSDMVNGDMSIDQLQDVRVEDLLGRDPVTPAPQLMEKHITGQTVLVTGAGG  283
             V V  +P + ++++G++ +++L+ V VEDLLGRDPV      + K++T +T+LVTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  284  SIGSELCRQILQQRPKVLVLYELSEFALYAIERELTQICQHQGIGAEIIPVIGTVQRRNR  343
            SIGSE+CRQ+ +  P  ++L   +E ++Y I++EL  + +++    E+IP+I+ VQ ++R
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDKER  348

Query  344  IETVLKTFAVDTVYHAAAYKHVPLVEYNMVEGVRNNVFGTWHTAEAAISAGVKQFVLIST  403
            +  V++++    VYHAAA KHVPL+EYN  E+++NNV+GT++TAEAA  A V +FV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  404  DKAVRPTNVMGTTKRLSELVLQGLAQRQRGTRFSMVRFGNVLGSSGSVVPLFKEQIEHGG  463
            DKAV P NVMG++KR++E+V+Q++ +    T F  VRFGNVLGS GSV+PLFK QIE GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  464  PVTVTHPDITRFFMTIPEAAQLVIQAGTMGHSGSVFVLDMGDSVKIVDLARKMIRLSGLE  523
            PVTVTHP++TR+FMTIPEA++LV+QAG+++ +G +FVLDMG +VKIVDLA+++IRLSG  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  524  EKTEKNPHGDIAIEFSGLRPGEKLYEELLIGDNVEASD-HPRILRANEQSLSWDEM-EKL  581
            E        DI+IEFSG+R+GEKL+EELL  D++++ +   +I R++ Q +  +E+ +K+
Sbjct  529  E-------EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKI  581

Query  582  LGLLDDACQR  591
             ++L +   R
Sbjct  582  DDFLINESVR  591

335) IL0569 in NC_006512


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  309 bits (1159),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 214/490 (44%), Positives = 339/490 (70%), Gaps = 20/490 (4%)

Query  111  LVAFLLTGGSRL---IVREGYQRAMSRQKDRVMIYGAGSAGRQLAQALANGD--EFHPVM  165
            ++ +LL GGSRL   I R  +    +++K  +++ G+G +G  L + + N      +PV+
Sbjct  113  MMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIV-GGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  166  FIDDDSGLQNTSVL-GLKVTGPEGIACAVRELDVQRILLALPSTLRSRRRQILDSL-EQL  223
             +DDDS  Q+ S+  G+KV G       +      + ++   +TL  +R + ++ L E  
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  224  PVKVQTVPGMSDMVNGDMSIDQLQDVRVEDLLGRDPVTPAPQLMEKHITGQTVLVTGAGG  283
             V V  +P + ++++G++ +++L+ V VEDLLGRDPV      + K++T +T+LVTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  284  SIGSELCRQILQQRPKVLVLYELSEFALYAIERELTQICQHQGIGAEIIPVIGTVQRRNR  343
            SIGSE+CRQ+ +  P  ++L   +E ++Y I++EL  + +++    E+IP+I+ VQ ++R
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDKER  348

Query  344  IETVLKTFAVDTVYHAAAYKHVPLVEYNMVEGVRNNVFGTWHTAEAAISAGVKQFVLIST  403
            +  V++++    VYHAAA KHVPL+EYN  E+++NNV+GT++TAEAA  A V +FV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  404  DKAVRPTNVMGTTKRLSELVLQGLAQRQRGTRFSMVRFGNVLGSSGSVVPLFKEQIEHGG  463
            DKAV P NVMG++KR++E+V+Q++ +    T F  VRFGNVLGS GSV+PLFK QIE GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  464  PVTVTHPDITRFFMTIPEAAQLVIQAGTMGHSGSVFVLDMGDSVKIVDLARKMIRLSGLE  523
            PVTVTHP++TR+FMTIPEA++LV+QAG+++ +G +FVLDMG +VKIVDLA+++IRLSG  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  524  EKTEKNPHGDIAIEFSGLRPGEKLYEELLIGDNVEASD-HPRILRANEQSLSWDEM-EKL  581
            E        DI+IEFSG+R+GEKL+EELL  D++++ +   +I R++ Q +  +E+ +K+
Sbjct  529  E-------EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKI  581

Query  582  LGLLDDACQR  591
             ++L +   R
Sbjct  582  DDFLINESVR  591

336) Rfer_2679 in NC_007908


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  309 bits (1159),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 207/489 (43%), Positives = 341/489 (70%), Gaps = 28/489 (5%)

Query  122  LLLAVGA---WRTLARFWLSGEYVSRLNRGTLPKVLIYGAGSAGRQLVGAMASS--LEMH  176
            LLL  G+   WR   +  +S E       G     LI G+G +G  L+  M ++  + M+
Sbjct  116  LLLIGGSRLSWRIYRKTFISKE-------GKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  177  AVGFLDDDPHLHGREL-NGLRIYNP-AQLPQLVTRLQVSDVLLAMPSASRQRRKDILQLT  234
            +V  +DDD++ +   + +G+++     ++P+LV ++++  +++A+P+ S+QR ++I +L 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  235  RQARVAVRTLPGLMDLAQGHVLVSDLREIDIEDLLGRDSVPPDASLFGKNIAGKVVMVTG  294
              + V V  +P + ++  G++ V+ L+ +++EDLLGRD+V  D + ++K+++ K ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  295  AGGSIGSELCHQIIRLAPSKLLLVELSEWALYTVHQKLLEILPEENMPHVQVLPLLASVR  354
            AGGSIGSE+C+Q+ +++P +++L+  +E ++Y +HQ L+ +  EE    ++V+P++A V+
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE----IEVIPIIADVQ  344

Query  355  DADRMAEIMRTWQPHTVYHAAAYKHVPMVEHNPAEGVKNNVLGtwttaraaatHRVSNFV  414
            D +RM  +M++ +P  VYHAAA KHVP++E NP E++KNNVLGT+ TA AA    VS+FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  415  LISTDKAVRPTNIMGASKRLAEMVLQALASQTKPGGTCFSMVRFGNVLGSSGSVVPRFRK  474
            ++STDKAV P N+MGASKR+AEMV+Q++ ++T   +  F  VRFGNVLGS GSV+P F+K
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD--FVAVRFGNVLGSRGSVIPLFKK  462

Query  475  QIKDGGPITLTHADITRYFMSIPEAAQLVIQAGAMAKGGDVFVLDMGEPVRIIDLARSMV  534
            QI  GGP+T+TH+++TRYFM+IPEA++LV+QAGA+A GG++FVLDMG PV+I+DLA++++
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  535  ELSGLTVRDVANPEGDIEVKITGLRPGEKLYEELLIGDNPLPTQ-HPRIMKAHEQFVPWP  593
             LSG         E DI + ++G+R+GEKL+EELL  D+  P Q   +I ++  Q +   
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

Query  594  ELSTCLDGL  602
            EL   +D++
Sbjct  576  ELYNKIDDF  584

337) DICTH_0426 in NC_011297


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  309 bits (1158),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 213/493 (44%), Positives = 340/493 (69%), Gaps = 13/493 (2%)

Query  62   LYTFLFKLHRTLWEYFSLEALKELTLAVTLEKVIFFLSHLLLPISGLPRSIVVISYFTSL  121
            +++ +F L +  WEY    ++ EL L V      +  + +++PI     +++ + ++T +
Sbjct  57   VFAQIFDLYHRAWEY---ASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWM  113

Query  122  LFLFSVRAFS-RW--YHESSKIKSKNIYASPKRVVIVGAGDAGEKILREIKTNREINYEV  178
            + L+ + +    W  Y+ +   K     +  K  +IVG+G +G  ++R++     +  E 
Sbjct  114  MHLLLIGGSRLSWRIYRKTFISKE----GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  179  AGFLDDDPKKIGKTI-HGVKILGPISSLPKVVVEKRVQEILVAIPSAPPSLLRNIVSMTS  237
               +DDD++K   +I  GVK+ G I  +P +V    ++ I++AIP+ +   LR+I  +  
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  238  KLRIPVKTLPGIWELIDGKVTISKIRNVKIEDLLERDVINLDSERIGEYLRGKKVLVTGA  297
               + V  +P I +++ G + ++K+++V +EDLL RD ++LD   I+  L  K +LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  298  GGSIGSEICRQVASYKPRKLILLGRGENSIFNIELELKSIY-PKLDIKSYIADIRDRDRI  356
            GGSIGSEICRQV  + P +++LLG+GENSI++I+ EL ++Y   +++ + IAD++D++R+
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERM  349

Query  357  FYIFSVEKPDIVFHTAAHKHVPLMEENPDEAVFNNVFGTINLMDASKEYGVSKFIFISTD  416
              +    KP +V+H+AAHKHVPLME NP+EA+ NNV+GT N  +A+K   VSKF+ +STD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  417  KAVYPSNIMGATKRVGEILIKYYNSH-SKTEYIAVRFGNVLGSRGSVLEVFRKQLEKGGP  475
            KAV P+N+MGA+KRV+E++I+  N++ SKT+++AVRFGNVLGSRGSV+ +F+KQ+E GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  476  ITVTHEDMERYFMTIPEAVGLVLQAGAIGRSGDLFVLDMGKPIKIIDLARNFIELSGYSL  535
            +TVTH +M RYFMTIPEA  LVLQAGA++ +G++FVLDMGKP+KI+DLA+N+I LSGY  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  536  DDIEIKITGLRPG  548
            +DI I ++G+R+G
Sbjct  530  EDIGIEFSGIRSG  542

338) Thivi_2782 in NC_018012


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  309 bits (1157),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 214/499 (43%), Positives = 346/499 (70%), Gaps = 22/499 (4%)

Query  64   LFGLYRGVWRFASVPDLVRITKAVLAG--TAAIVVLLFIVNRSAL----VPRSVPVlylg  117
            +F+LY+  W +ASV++L+ I K+V ++  +++I+V +F  + + L    + + + +L + 
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI-  119

Query  118  lqllllAGPRL---IYRWLKDHRLNLSSGQRVLIVGAGRAGEMLARDMLRDPHRAYFPLG  174
                  +G+RL   IYR  K    + +  +  LIVG+GR+G +L R+M+  P  +  P+ 
Sbjct  120  ------GGSRLSWRIYR--KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  175  FVDDKLRRQGAEV-HGVPVLGPTESIPELVERLGIDLLMLAIPSATAREMRRLVELCEHA  233
             VDD   +Q   +  GV V G    IPELV ++ I  +++AIP+ + + +R +  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  234  GVAFRTVPELRSLMSGQVNLSQLRPVSIEDLLGREPIQLDWSAIHDGLAGRDILITGAGG  293
             V    +P++ ++MSG++++++L+ V +EDLLGR+P++LD ++I   L+ + IL+TGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  294  SIGSELVRQIAGAGPARLILIDHSEFNLYRIEMELLETY-PTLRFSRHlldvadaravaa  352
            SIGSE+ RQ+    P R++L++H+E ++Y+I+ EL+  Y   +     + DV D   +  
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  353  lfrdERPGIVFHAAAYKHVPLLENQLRAAVRNNVIGTRIVAEAAAASGCERFVLISTDKA  412
            + +  +P +V+HAAA KHVPL+E + + A++NNV+GTR  AEAA  +   +FV++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  413  VNPSNVMGATKRIAESICQMLDGQSA-CRFITVRFGNVLGSAGSVVPLFQRQIARGGPVT  471
            VNP+NVMGA+KR+AE + Q ++ +++   F++VRFGNVLGS GSV+PLF++QI  GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  472  VTHPDIERFFMTIPEACQLIMQAATIGDGGEIFVLDMGEPIKIRYLAEQMIRLSGHEPGE  531
            VTHP++ R+FMTIPEA +L++QA++++ GGEIFVLDMG P+KI  LA ++IRLSG    E
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EE  530

Query  532  GIAIDYVGLRPGEKLYEEL  550
            +I+I++ G+R+GEKL+EEL
Sbjct  531  DIGIEFSGIRSGEKLFEEL  549

339) CK1_17560 in NC_021014


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  309 bits (1157),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 253/604 (42%), Positives = 391/604 (65%), Gaps = 62/604 (10%)

Query  41   HLYNSVWRFASFHELIKITVASVITGVLHI-VGITIFWGRMP-ASYYLIGIMLQFFLTVG  98
            +LY+  W +AS  ELI + V SV ++++   + + IF  + P    Y+I  M++++L  G
Sbjct  63   DLYHRAWEYASVSELI-LIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGG  121

Query  99   VRFS---YRFVLLernrreksereersknVMIIGAGEAGRTIVRELQNAKETNSRVRCLI  155
             R+S   YR  ++ ++ + K+         +I+G+G +G  ++R++ N+         ++
Sbjct  122  SRLSWRIYRKTFISKEGKKKP--------TLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  156  DDNPNKWGRYME-GVPVVGGRDDIFLNVDKYHINQILLAIPTATPHQKRDILNICKETGC  214
            DD++NK    +  GV V G   DI   V K++I++I++AIPT + ++ R+I ++C  T  
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  215  ELKQLPGVYQLVNGEVSLSKMKKVAVEDLLGRDTIKVNMSEIFQYLKGKRILVTGGGGSI  274
            E+ ++P + ++++GE+ ++K+KKV VEDLLGRD + ++M+ I + L  K ILVTG+GGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  275  GSELCRQIAGHEPELLVIFDIYENNAYDIEQELKASY-PNLNLKVLIGSVRDSKRINWVF  333
            GSE+CRQ+    P+ +++++  EN+ Y+I+QEL + Y  ++++  +I+ V+D  R++ V 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  334  ETYKPEIVYHAAAHKHVPLMENSPCEAIKNNVVGTYKTAYAAMMNGCQRFVLISTDKAVN  393
            ++YKP +VYHAAAHKHVPLME +P EAIKNNV+GT +TA AA +    +FV++STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  394  PTNIMGASKRLCEMVVQSMNMVSHNGHTDWLPRLGGHRKDTLDALHDNEGQAYVSANHTS  453
            P N+MGASKR+ EMV+QSMN                                    N+TS
Sbjct  414  PPNVMGASKRVAEMVIQSMN------------------------------------NETS  437

Query  454  KTGTGTEFVAVRFGNVLGSNGSVIPLFKRQIEKGGPVTVTHPDIIRYFMTIPEAVSLVLQ  513
            K    T+FVAVRFGNVLGS GSVIPLFK+QIE GGPVTVTHP++ RYFMTIPEA  LVLQ
Sbjct  438  K----TDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQ  493

Query  514  AGTYAKGGEIFVLDMGAPVKIDTLARNLIKLSGYTPDVDIKVTYTGLRPGEKLYEEKLMA  573
            AG+ A GGEIFVLDMG PVKI  LA+NLI+LSGY  + DI + ++G+R+GEKL+EE L  
Sbjct  494  AGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKLFEELLNK  552

Query  574  EEGMEKTPNDLIHIGKPIEMDVQEFFKQLEVLAAYGYANSEKIRDIVAAIVPTYHSADSD  633
            +E       + I  GK   ++ +E++++++     ++  +E +RD +  +V    +++  
Sbjct  553  DEIHPEQVYEKIYRGKVQKIEKEELYNKID-----DFLINESVRDEIIFFVNNNKTGEEK  607

Query  634  LKLH  637
             K++
Sbjct  608  CKMD  611

340) RB2501_13474 in NC_013222


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  308 bits (1155),  Expect = 7e-85, Method: Compositional matrix adjust.
 Identities = 223/489 (46%), Positives = 347/489 (71%), Gaps = 20/489 (4%)

Query  131  LTASRYVFKVFYTNLINRGINFSKNVFIYGAGESGILTYNALNSISRSNVRVLGYIDDDR  190
            + +SR   +++   +I++  +  K  +I G+G +G L    + + +   +  +  +DDD 
Sbjct  119  IGGSRLSWRIYRKTFISKEGK-KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  191  QKSGKQI-NGVRVYGPEILNREFLRKKNVSEIIFAIQNIDQKKLRKLVESLVE-YSVQVK  248
            +K    I +GV+V G      E+++K N+  II+AI  + Q++LR  ++ L E  +V+V 
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE-INKLCEGTNVEVF  236

Query  249  IVPPVEDWINGELKASQIKQIQIEDLLDRAPISIKNAKISKELNGKSILVTGGAGSIGSE  308
             +P +E+ ++GE+  +++K++++EDLL+R P+ +  A ISKEL  K+ILVTG++GSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  309  IVRQICNYDYKTLIVLDQAESALYDLQQEL----KQNGFHNFIPIVADVRDKNRANSIFQ  364
            I RQ+C++    +++L+++E+++Y+++QEL    K++   + IPI+ADV+DK+R + + Q
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE--IEVIPIIADVQDKERMKKVMQ  354

Query  365  EYKPDIVFHAAAYKHVPLMEYNPYEAIKINIAGTKVIADLAQQHNTDKFVFISTDKAVNP  424
             YKP +V+HAAA KHVPLMEYNP EAIK N+ GT+  A+ A+  +  KFV +STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  425  TNVMGASKRIAEMYISCIQQEGG-TKYITTRFGNVLGSNGSVIPLFKKQIEKGGPLTVTH  483
             NVMGASKR+AEM I  +++E + T +++ RFGNVLGS GSVIPLFKKQIE GGP+TVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  484  KEITRYFMTIPEASQLVLEAGAMGEGGEIFIFDMGESVKIFDLAKNMIRLSGLRYPEDID  543
              +TRYFMTIPEAS+LVL+AGA++ GGEIF++DMG +VKI DLAKN+IRLSG +  EDI+
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  544  IKITGLRPGEKLYEELLANGE-NTLPTYNRKIMISKVRELD----YAKVRSLIDELCISN  598
            I ++G+R+GEKL+EELL ++E +    Y+ KI  +KV+ ++    Y K+  ++ +  + +
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYE-KIYRGKVQKIEKEELYNKIDDFLINESVRD  592

Query  599  --MFFSGDT  605
              +FF  + 
Sbjct  593  EIIFFVNNN  601

341) Marpi_1345 in NC_016751


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  308 bits (1155),  Expect = 7e-85, Method: Compositional matrix adjust.
 Identities = 221/522 (43%), Positives = 356/522 (69%), Gaps = 17/522 (3%)

Query  57   IYDQIWRFATLKEIKPIVYSAFTGYLLNFLVVE--AIRRLFFKSFSLPLTVGFITALLGS  114
            +Y++ W +A++ E+  IV S  ++ +   ++V   + +  F++ +       FIT ++  
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLY-------FITWMMHL  116

Query  115  ILVIGSR-TWWFSKNKHIENHYPDNRKNILIIGAGEAGVELLDEFLRNPENGVVKGFLDD  173
            +L+ GSR +W++ ++  I ++  +++K  LI+G+G +G  L+ + +  P  G+   ++ D
Sbjct  117  LLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  174  DEIKIGRL--IRGIPVLGKTNEVMDYVEKLKINEVIIAIPSATSEELKRIISNIDTKRVR  231
            D+ +  ++    G+ V G  +++ + V K++I+ +IIAIP+ + + L+ I    +   V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  232  LKTLPGLFEILNNKVSLGFLRDVNIEDLLGRKEIKVNFDEIGFYITNKTVLVTGAGGSIG  291
            +  +P + ++++  + +  L+ V++EDLLGR  + ++   I+  +T+KT+LVTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  292  SEICRQVAALNPEKLLILGRGENSIFKINRELKEKF-PNLKVVEIISDVTNEDRMEEVFK  350
            SEICRQV  + P+++++LG+GENSI+ I++EL   +  ++ V+ II+DV + +RM  V +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  351  RFSPDVVFHAAAHKHVPLMEKNPSEAFRVNSYGTYILARLSDKYDVSHFVFISTDKAINP  410
             + P VV+HAAAHKHVPLME NP EA++ N  GT   A  +   +VS FV +STDKA+NP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  411  TSIMGSSKRLGEiiirsisr-rsKTHFGIVRFGNVLGSRGSVVPIFKEQIKNGGPVTVTH  469
             ++MG+SKR++E++I+S++   SKT+F  VRFGNVLGSRGSV+P+FK QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  470  PDMKRYFMTIPEAVALVLQAGAFANKGEVFVFDMGKPISIDYLAREMIRLSGYIPDQDIK  529
            P+M RYFMTIPEA  LVLQAGA+A  GE+FV+DMGKP+ I  LA+++IRLSGY  ++DI 
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIG  533

Query  530  IVYTGIRNGEKLYEELFLDSEEFLKTPNDRIYILKENKILNE  571
            I ++GIR+GEKL+EEL+   E       ++IY  K +KI +E
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

342) wbpM in NC_004757


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  308 bits (1154),  Expect = 9e-85, Method: Compositional matrix adjust.
 Identities = 213/493 (44%), Positives = 328/493 (67%), Gaps = 20/493 (4%)

Query  130  ILLLLFVGASRAMARVWLGDQYQNIL--KRASQPKALIYGVGRTGRQLASVMTNSPEIQV  187
            ++ LL++G+SR     W    Y++ +  K + +  +LI G GR G  L   M N+P + +
Sbjct  113  MMHLLLIGGSRL---SW--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  188  VGFL---DDDDRLHGHVLNGLPIYNP-GDLTGLVLTLNISDVLLAMPGISRRRRNEILSQ  243
               L   DD ++    + +G+ +     D+  LV  +NI  +++A+P +S++R  EI   
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  244  IRSARVSVRTLPSMADLIQGRVSIADLRELDIDDLLGREPVMPNHILLAKNILDKVVLVT  303
              ++ V V  +P++ +++ G + +  L+ ++++DLLGR+PV  +   ++K++ +K +LVT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  304  GAGGSIGSELCRQILAVGPARLLLIEQNEFALYLIHQELEEKLASREIVLVPLLASVQDE  363
            GAGGSIGSE+CRQ+    P R++L+ + E ++Y IHQEL   L   EI ++P++A VQD 
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEVIPIIADVQDK  346

Query  364  DRMCEIMSTWHPDTVYHAAAYKHVPLVEHNPAEGIKNNALGTLCLAQAAEENGVADFVLI  423
            +RM  +M +  P  VYHAAA KHVPL+E NP E+IKNN LGT   A+AA    V+ FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  424  STDKAVRPTNIMGASKRLAEMVLQALADRGSATRFSIVRFGNVLGSSGSVVPRFRRQIRE  483
            STDKAV P N+MGASKR+AEMV+Q++ +  S T F  VRFGNVLGS GSV+P F++QI  
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  484  GGPITLTHPEITRYFMTIPEAAQLVIQAGAMAKGGGVFVLDMGQSVKIIDLAHRMVELSG  543
            GGP+T+THP +TRYFMTIPEA++LV+QAGA+A GG +FVLDMG++VKI+DLA  ++ LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  544  LKIRDEQNPEGDIEIVITGLRPGEKLYEELLIGDDLEPTS-HPRIMKAREEFVPWADLED  602
             K       E DI I ++G+R+GEKL+EELL  D+++P     +I +++ + +   +L +
Sbjct  527  YK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYN  579

Query  603  KLSALEVALNVND  615
            K+  + +  +V D
Sbjct  580  KIDDFLINESVRD  592

343) Nit79A3_0675 in NC_015731


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  307 bits (1151),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 219/501 (44%), Positives = 336/501 (68%), Gaps = 29/501 (5%)

Query  121  MGGSRLTYRAWKE-RRLYGLESNEAKLVLILGAGSTAVSLVKDLTRSR--DWHVVGMLDD  177
            +GGSRL+   W+  R+ +       K  LI+G+G  +  L++++  +   + + V ++DD
Sbjct  119  IGGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  178  DPRKLGTRLQ-GIRVLGTINELPQWVQKLNVGHVIIAIPSVSRRIHRQALEMCSEIGVKA  236
            D+ K    +  G++V G I+++P+ V+K+N+  +IIAIP++S++  R+   +C    V  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  237  MTVPSYADLISGKTTVSQIREIELDDLLGRAPVVLDNDGLHGLLTGKVILVTGAGGSIGS  296
              +P+  +++SG   V++++ +E++DLLGR PV LD  ++   LT K ILVTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  297  ELCRQLAAFKPNRIVFLELNEFALYSIQEEFLSRF-PGMAMSFVIGDIKDHARMTQLFTQ  355
            E+CRQ+  F P+RI++L   E ++Y I++E+++ +   + +  +I+D++D  RM ++   
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  356  FRPSVVFHAAAYKHVPLMEQENACQALLNNVLGTYVLAQVAISFGVKKFVLISTDKAVNP  415
            ++P VV+HAAA KHVPLME +   +A+ NNVLGT   A+ A    V KFV++STDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQ-EAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  VSVMGASKRLAEMVCQALQQSITKNAKPDQNNQSNQTCFVMVRFGNVLGSTGSVIPKFRE  475
             +VMGASKR+AEMV Q++++  +K              FV VRFGNVLGS GSVIP F+ 
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTD------------FVAVRFGNVLGSRGSVIPLFKK  462

Query  476  QIARGGPITITHPEMTRYFMSIPEAAQLVLQAGLMGGTKGGGEIFVLDMGDPVKIVDLAN  535
            QI  GGP+T+THP MTRYFM+IPEA++LVLQAG ++    GGEIFVLDMG PVKIVDLA+
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALA---TGGEIFVLDMGKPVKIVDLAK  519

Query  536  DLIHLSGLGEDDIRIVFSGLRPGEKLHEELLAASENTFPTPHQKLRIAQARQVDEQWLSE  595
            +LI+LSG  E+DI I FSG+R+GEKL EELL   E       +K+  ++ ++++ +   E
Sbjct  520  NLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE---E  576

Query  596  LTVWLNKITVLSDQEVRDQLV  616
            L   ++ +  L ++ VRD+++
Sbjct  577  LYNKIDDF--LINESVRDEII  595

344) Dbac_3268 in NC_013173


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  307 bits (1151),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 219/532 (42%), Positives = 356/532 (67%), Gaps = 24/532 (4%)

Query  66   GLYRGMWRYTGLADLWKIGRAVFMAEVALIIYVAFTSHFQGYPRSVFILDPLLAFVFACG  125
            +LY+  W Y+++++L  I ++V  + VA  I V++ ++   + R ++++  ++ +++  G
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  126  ARVLIRSLYETSAQPKDWLFALLPERFCAPASGIRALIVGADADGARIAKEILDVRDSGL  185
            +R L + +Y  +  +K+             +    +LIVG++ +G+ + +++++    G+
Sbjct  122  SR-LSWRIYRKTFISKE-------------GKKKPTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  186  HLVGFVDDDPARIGRNI-HGLPVYGPLAALVS-VAQMTRAEEILVSAGQAGGHLREIVDA  243
            + V  VDDD+ +   +I  G+ V G +  +   V +      I+  +  +  +LREI   
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  244  CESAQLGIKKLPALADIASGKVSVKALRDVRYEDLLGREEVHLDEAGIKGYLADKVVLVT  303
            CE++++ + K+P + ++ SG + V+ L+ V  EDLLGR+ V+LD A+I   L++K +LVT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  304  GAGGSIGSELCRQIIRFGPRLLVLFDAGEENLYSIEMEL--LHQHGFTRYVTVLGQVQDA  361
            GAGGSIGSE+CRQ+ +F P  ++L++ GE+++Y I+ EL  L ++ +   + ++++VQD 
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEV-IPIIADVQDK  346

Query  362  ALVDAVFAARQPHVVFHAAAYKHVPMLEGNPWQAVTNNIVGSRTVMEASVRHGAGRFVLV  421
              +  V  A +P VV+HAAA KHVP++E NP +A+ NN++G+R   EA+     ++FV+V
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  422  STDKAVRPTNVMGASKRVAELLMHGF--QGGETTFMAVRFGNVLGSSGSVIPLFRSQIER  479
            STDKAV P NVMGASKRVAE+++++   + + T F+AVRFGNVLGS GSVIPLF+ QIE 
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  480  GGPVTVTHPEVTRYFMTIPEAAQLIVQAGALGRGGEIFVLKMGQPVRIADLARDLIILSG  539
            GGPVTVTHP +TRYFMTIPEA++L++QAGAL+ GGEIFVL MG+PV+I DLA++LI LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  540  KDPAEIEVKFTGLRPGEKLYEELITAGEGVLETGHEKIMVLRSEKTQIENDE  591
                +I + F+G+R+GEKL+EEL+  +E   E   EKI   R+   +IE++E
Sbjct  527  YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKI--YRGKVQKIEKEE  576

345) ELI_3080 in NC_014624


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  307 bits (1151),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 222/535 (42%), Positives = 368/535 (69%), Gaps = 32/535 (5%)

Query  66   GMYNTLWRYASIEELWQITFSVILANILTFVLYFAIGAGVPTTVQI--LSFVFDLIMVGA  123
            ++Y+  W YAS+ EL  +    + ++I++  +  +I +  +  +++  ++ + +L+++G+
Sbjct  63   DLYHRAWEYASVSEL-ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGG  121

Query  124  IRIFYRTGRRIKQGVGGKGNSRNVLIVGAGEAGIKILRELAAG---EMKSYVVGFVDDNV  180
             R+  R  R  K  ++  G+ +  LIVG+G +G  ++R++       M + +V  VDD+ 
Sbjct  122  SRLSWRIYR--KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV--VDDDS  177

Query  181  YKQKKKI-NGLTVLGGREDIPDIVEDEQVNEIIIALPSVPKKEMNEIAEICHKTGRPVRV  239
             KQK  I +G+ V G   DIP++V   +++ IIIA+P+++++ + EI  +C+ T   V  
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  240  LPSFDDILNYDVSLSKLRDLQIEDLLDRDEIHLDKSVISEFIRGKVVLVTGGAGSIGSEL  299
            +P+++++++ ++ ++KL+ +++EDLL+RD ++LD + IS  +  K +LVTG++GSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  300  CRQIIKYQPKQLVILDIYENTlyylelelrryiheleieSGYGIRLDLE--ITSIRDKAS  357
            CRQ+ K+ P ++++L+  EN++Y ++ EL            Y   +++   I+ ++DK  
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGL---------YKEEIEVIPIIADVQDKER  348

Query  358  VNSLFERYRPQVVFHAAAHKHVPLMEKTPKEAVKNNIFGTRNVLDACVEYQVEKFVQIST  417
            ++ + + Y+P VV+HAAAHKHVPLME  P+EA+KNN++GTRN  +A    +V KFV +ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  418  DKAVKPTNVMGTTKRICEMLIQ-LYDQHNQTEFVAVRFGNVLGSNGSVIPIFKEQIANGG  476
            DKAV+P NVMG++KR+ EM+IQ + ++ ++T+FVAVRFGNVLGS GSVIP+FK QI  GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  477  PLTVTHPDIERFFMTIPEATQLVLQAGSIAHGGEIFVLDMGEPVKIKDLAERMVRLSGYE  536
            P+TVTHP++ R+FMTIPEA++LVLQAG++A GGEIFVLDMG PVKI DLA  ++RLSGY 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  537  PYTEMPIVFSGLRPGEKLYEELSYDMAEFDKTR-YKDIF------VEKPEVFDEI  584
               ++ I FSG+R+GEKL+EEL  +  E++  + Y  I+      +EK E+++ I
Sbjct  529  E-EDIGIEFSGIRSGEKLFEEL-LNKDEIHPEQVYEKIYRGKVQKIEKEELYNKI  581

346) pRL90052 in NC_008379


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  306 bits (1147),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 219/528 (42%), Positives = 353/528 (67%), Gaps = 44/528 (8%)

Query  69   VMGMYRAIFRYANMAAFITVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLL-----  123
            + ++Y+    YA+++ +I ++K+++   VA     T++ VP   +   +L+ +++     
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVA-----TGIIVPIFTQQAPFLRLYFITWMMH  115

Query  124  LIAIGLSRLSIRYWLGDAYQRILHKNMLAK------VLIYGAGTAGRQLAGALINSAELN  177
            L+ IG SRLS   W      RI +K  ++K       LI G+G +G  L   ++N++ + 
Sbjct  116  LLLIGGSRLS---W------RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  178  VVGYL---DDDPRLKGGVMGGLPIYD-PSDLPVLAESLGVHNVLLALPSASRQRRNEILE  233
            +   L   DD  + K ++ +G+ + +   D+P L   + + ++++A+P+ S+QR  EI  
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  234  HIRKARVNVRTLPDLTALAQGRIAVSDIRELEIEDLLGREAVAPRQELLDKSMRNKVVMV  293
                + V+V  +P++  +  G I V+ ++ +E+EDLLGR++V      + K + +K ++V
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  294  TGAGGSIGGELCRQILRTGPSSLILIDQNEFALYNIHAELQKLAELYKHENMQIVPILCS  353
            TGAGGSIG+E+CRQ+ +  P  ++L+++ E ++Y+IH   Q L  LYK E+++++PI+  
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIH---QELIGLYK-EEIEVIPIIAD  342

Query  354  VRDQDRMEHVMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLVAARAANKCGVSN  413
            V+D++RM  VMQ+ +P  +YHAAA KHVPL+E N+ E+IKNNV+GT  +A AA+   VS+
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  414  FVLISTDKAVRPTNVMGASKRLAEMVLQALAAESATDRMRTNFSMVRFGNVLGSSGSVVP  473
            FV++STDKAV P NVMGASKR+AEMV+Q++  E++    +T+F  VRFGNVLGS GSV+P
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIP  458

Query  474  LFRQQIKEGGPVTLTHPDITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLA  533
            LF++QI  GGPVT+THP++TRYFMTI+EAS+LV+QAGA+A GG++F+LDMG PV+I DLA
Sbjct  459  LFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLA  518

Query  534  RKMVELSGLAVRDEDNPEGDIELSVTGLRPGEKLFEELLIGDNPETTE  581
            ++++ LSG         E DI +  +G+R+GEKLFEELL  D+ +  +
Sbjct  519  KNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

347) Daro_1278 in NC_007298


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  306 bits (1145),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 208/486 (43%), Positives = 335/486 (69%), Gaps = 22/486 (4%)

Query  76   WRFASITDLQHLLSAVFVGALLTSTVVAIF--KVPLIPRSVL--VLHPLLLSIIMGGTRF  131
            W +AS+++L  ++ +V  + + T+ +V+IF  + P++    +  ++H LL+    GG+R+
Sbjct  69   WEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI----GGSRL  124

Query  132  AYRSWKEHR-VYGPAKLRGQPVLIIGAGEAADSLLREIHRSGQWY----AVAIVDDNPgr  186
               SW+  R  + +   + +P LI+G+G ++  L+R++  +   Y    +V +VDD++ +
Sbjct  125  ---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP--YMGMEPVLVVDDDSNK  179

Query  187  tgrrlrg-lPIMSPIENIGPIAENLGAKHAIIAMPNDRPAQRRRVTELASAAGLTVLTVP  245
                + + + + + I +I  +  ++  K  IIA+P     + R +  L  ++ + V+ +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  246  SYDDLLSGRLSVSSIRKVELEDLLGREAVSLDDNGVHDLLGGNVVLVTGAGGSIGSELCR  305
            + ++++SG + V+ ++KVE+EDLLGR++V LD  ++   L  + +LVTGAGGSIGSE+CR
Sbjct  240  NIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICR  299

Query  306  QIARFKPSRLVLVDASEFALYSIGEEL-SVSHPLLQCQSWAADVRDKDRVTEIFAQERPV  364
            Q+ +F P R++L++ +E ++Y I +EL ++    ++  +  ADV+DK+R+  +    +P 
Sbjct  300  QVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  365  VVFHAAAYKHVPLMESVNAWQAVRTNALGTHTVARIAQDFEVRKFVLISTDKAVNPTNVM  424
            VV+HAAA KHVPLME  N+ +A++ N LGT+  A  A+  EV KFV++STDKAVNP NVM
Sbjct  360  VVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVM  418

Query  425  GATKRLAELLCLAVNAGQS-TKFVTVRFGNVLGSNGSVIPKFREQIAQGGPITVTHPDIV  483
            GA+KR+AE++  ++N   S T FV+VRFGNVLGS GSVIP F+ QI  GGP+TVTHP++ 
Sbjct  419  GASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  484  RYFMTIPEAAQLVLQAGLMGKGGEIFVLDMGEPVRIIDLAKDMIRLSGLSDDDVRIEFTG  543
            RYFMTIPEA++LVLQAG ++ GGEIFVLDMG PV+I+DLAK++IRLSG  ++D+ IEF+G
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSG  538

Query  544  LRPGEK  549
            +R+GEK
Sbjct  539  IRSGEK  544

348) MCA0903 in NC_002977


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  306 bits (1145),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 217/509 (43%), Positives = 360/509 (71%), Gaps = 24/509 (4%)

Query  64   RLFGLYRGIWRFASMPDLLRIAKASASGIVL--IVAALF-----FLERLDAVPRSVIPly  116
            ++F+LY+  W +AS+++L+ I K+ +S+IV   I+ ++F     FL RL  + + +    
Sbjct  60   QIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL-RLYFITWMM----  114

Query  117  tlllvlflSTPRALYRMWKDRSVHLMNGRR--ALIVGAGKAGETLVRDLLRSSESAFAPV  174
                +L+++ +R   R+ +   +   +G++  +LIVG+G++G  L+R+++ ++  +  PV
Sbjct  115  ---HLLLIGGSRLSWRIYRKTFIS-KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  175  AFVDDDPHKRGWEI-HGVRVRGSCDRIPALAEKLDIEAILIAMPSAGDRDMRRIVEICET  233
              VDDD++K+   I  GV+V+G    IP L  K++I  I+IA+P+ +++ +R I  +CE 
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  234  TGLPFLTLPSVQEMWGGRVS-DALRDVSIEDLLGRAPVRLDSAELAGYLDGKCIMVTGGG  292
            T +  + +P+++++ +G +  + L+ V +EDLLGR PV LD A ++  L  K I+VTG+G
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  293  GSIGSELCKQIARFSPGRLVVFEHCEFNLYRVELELRQAF-PDMAIHAVLGDVTDAASVR  351
            GSIGSE+C+Q+ +F+P+R++++ H E ++Y+++ EL   +  ++ + ++++DV D   ++
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMK  350

Query  352  RAIDVHKPAIIFHAAAYKHVPLLQQQVREAVFNNVIGTRTvaevaveygvgefvLISTDK  411
            + ++  KP +++HAAA KHVPL++ + +EA+ NNV+GTR  AE A    V+ FV++STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  412  AVNPTNVMGATKRAAELVVQSYNGHTA-TRFITVRFGNVLGSAGSVVPLFRKQIRNGGPV  470
            AVNP NVMGA+KR AE+V+QS N +T+ T F++VRFGNVLGS GSV+PLF+KQI  GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  471  TVTHPEVTRFFMTIPEACQLIMKAAATGQGGEVFVLDMGEAVRIGYLAEQMIRLSGKRPG  530
            TVTHP +TR+FMTIPEA +L+++A+A + GGE+FVLDMG +V+I  LA ++IRLSG +  
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-E  529

Query  531  TDIAIEYVGLRPGEKMHEELFLGFEKLQP  559
             DI+IE+ G+R+GEK+ EEL L  + ++P
Sbjct  530  EDIGIEFSGIRSGEKLFEEL-LNKDEIHP  557

349) wbiI in NC_011000


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  306 bits (1145),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 222/537 (42%), Positives = 357/537 (67%), Gaps = 17/537 (3%)

Query  63   FGLYRGLWVFASLPDLMRIAKavtgggmivmigavmF-QPAPIIPRSVLLVSPLMLFLAM  121
            F+LY+  W +AS+++L+ I K+VT++ +   I   +F Q AP++   + +++ +M +L +
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  122  GGAR---ALYRATkeyylygglvgkgkpvlvlgagTAGASLARELSRSGEWRLVGLL--D  176
            GG+R    +YR T                       +G+ L R++  +    +  +L  D
Sbjct  120  GGSRLSWRIYRKTFISKEGKKKPTLIVGGG-----RGGSLLIRQMMNTPYMGMEPVLVVD  174

Query  177  DDVTKQGREI-YGYKVLGSFNDLKHWTDAMKVEYAIIAIPSASVETQRRVATLCVRAGVK  235
            DD  KQ   I  G KV G ++D+ +     ++   IIAIP+ S +  R +  LC  + V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  236  AMVLPSLTALMPGQGFLSQVRNIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSIG  295
               +P++  +M+G+  +++++++++EDLLGR++V +D + +   L  + ++VTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  296  SELCRQILRFAPAQLVAFDLSEYAMYRLTEELRERF-PDLPVLPIIGDAKDSLLLDQVMS  354
            SE+CRQ+ +F+P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   + +VM 
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  355  RHAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAVN  414
               P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAVN
Sbjct  355  AYKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  415  PTNVMGASKRLAEMACQALQQTSGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVT  474
            P NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  475  HPEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACDLIRLYGFSEEQIR  534
            HP +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA +LIRL G+ EE+I 
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIG  533

Query  535  IEFTGLRPGEKLYEELLADDEATTRTPHPKLRIARAREVP-DNFLDELLPWLMQHRV  590
            IEF+G+R+GEKL+EELL  DE        K+  ++ + +  +++ + +   L+++ V
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

350) RL0810 in NC_008380


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  306 bits (1145),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 219/523 (42%), Positives = 351/523 (68%), Gaps = 44/523 (8%)

Query  85   VMGMYRAIFRYANMAAFITVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLL-----  139
            + ++Y+    YA+++ +I ++K+++   VA     T++ VP   +   +L+ +++     
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVA-----TGIIVPIFTQQAPFLRLYFITWMMH  115

Query  140  LIAIGLSRLSIRYWLGDAYQRILHKNMLAK------VLIYGAGTAGRQLAGALINSAELN  193
            L+ IG SRLS   W      RI +K  ++K       LI G+G +G  L   ++N++ + 
Sbjct  116  LLLIGGSRLS---W------RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  194  VVGYL---DDDPRLKGGVMGGLPIYD-PSDLPVLAESLGVHNVLLALPSASRQRRNEILE  249
            +   L   DD  + K ++ +G+ + +   D+P L   + + ++++A+P+ S+QR  EI  
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  250  HIRKARVNVRTLPDLTALAQGRIAVSDIRELEIEDLLGREAVAPRQELLDKSMRNKVVMV  309
                + V+V  +P++  +  G I V+ ++ +E+EDLLGR++V      + K + +K ++V
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  310  TGAGGSIGGELCRQILRTGPSSLILIDQNEFALYNIHAELQKLAELYKHENMQIVPILCS  369
            TGAGGSIG+E+CRQ+ +  P  ++L+++ E ++Y+IH   Q L  LYK E+++++PI+  
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIH---QELIGLYK-EEIEVIPIIAD  342

Query  370  VRDQDRMEHVMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLVAARAANKCGVSN  429
            V+D++RM  VMQ+ +P  +YHAAA KHVPL+E N+ E+IKNNV+GT  +A AA+   VS+
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  430  FVLISTDKAVRPTNVMGASKRLAEMVLQALAAESATDRMRTNFSMVRFGNVLGSSGSVVP  489
            FV++STDKAV P NVMGASKR+AEMV+Q++  E++    +T+F  VRFGNVLGS GSV+P
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIP  458

Query  490  LFRQQIKEGGPVTLTHPDITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLA  549
            LF++QI  GGPVT+THP++TRYFMTI+EAS+LV+QAGA+A GG++F+LDMG PV+I DLA
Sbjct  459  LFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLA  518

Query  550  RKMVELSGLAVRDEDNPEGDIELSVTGLRPGEKLFEELLIGDN  592
            ++++ LSG         E DI +  +G+R+GEKLFEELL  D+
Sbjct  519  KNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

351) Neut_0186 in NC_008344


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  305 bits (1144),  Expect = 6e-84, Method: Compositional matrix adjust.
 Identities = 214/496 (44%), Positives = 332/496 (67%), Gaps = 26/496 (5%)

Query  130  ILLLLFVGASRALARVWLGDQYQNIL--RHISRPRAFIYGVGRTGRQLAVAMANSPEIQI  187
            ++ LL++G+SR L+  W    Y++ +  ++  +  ++I G GR G  L   M N+P + +
Sbjct  113  MMHLLLIGGSR-LS--W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  188  AGFL---DDDDRLHGHVLNGLPIYNP-GDLTALVSTLNISDVLLAMPGISRRRRNEI--L  241
               L   DD ++    + +G+ +     D+  LV  +NI  +++A+P +S++R  EI  L
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  242  CQIRDARVSVRTLPSVTDLIQGKVGITDLRELDIDDLLGREPVTPNHILLAKNILGKVVL  301
            C+  ++ V V  +P++ +++ G + +  L+ ++++DLLGR+PV  +   ++K++  K +L
Sbjct  228  CE--GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTIL  285

Query  302  VTGAGGSIGSELCRQILVVGPIRLLLVEQNEFALYMIHQELEGKLASRDIVLVPLLASVQ  361
            VTGAGGSIGSE+CRQ+    P R++L+ + E ++Y IHQEL G L   +I ++P++A VQ
Sbjct  286  VTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEVIPIIADVQ  344

Query  362  DEGRMREIISTWHPDTVYHTAAYKHVPLVEHNPAEGIKNNVFGTLHLARAAEENGVMDFV  421
            D  RM+ ++ +  P  VYH+AA KHVPL+E NP E+IKNNV+GT + A AA    V  FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  422  LISTDKAVRPTNIMGASKRLAELVLQALADNNSTTRFSMVRFGNVLGSSGSVVPKFRQQI  481
            ++STDKAV P N+MGASKR+AE+V+Q++ ++ S T F  VRFGNVLGS GSV+P F++QI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  482  REGGPITLTHPEITRYFMTIPEAAQLVIQAGAMARGGGVFVLDMGESVKIMDLARHMIEL  541
              GGP+T+THP +TRYFMTIPEA++LV+QAGA+A GG +FVLDMG +VKI+DLA+++I L
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  542  SGLTVRDEQNLEGDIEIEITGLRPGEKLYEELLIGN--NPELTSHPRIMRAHEDSVPWAE  599
            SG         E DI IE++G+R+GEKL+EELL  +  +PE     +I R+  + +   E
Sbjct  525  SGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPE-QVYEKIYRGKVQKIEKEE  576

Query  600  LEGKLSALEMALNVND  615
            L  K+  + +  +V D
Sbjct  577  LYNKIDDFLINESVRD  592

352) SPISAL_08115 in NC_021291


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  305 bits (1142),  Expect = 7e-84, Method: Compositional matrix adjust.
 Identities = 219/499 (44%), Positives = 345/499 (70%), Gaps = 22/499 (4%)

Query  78   YMGPSDVWAVVRGVTLSTLVFVAIVAFLGLQGVPRATITIY---WLIALLLIGGSRFLIR  134
            Y + S++  +V++VT S +    IV+++  Q+   + + +Y   W++ LLLIGGSR+  R
Sbjct  71   YASVSELILIVKSVTSSIVATGIIVPIFTQQA---PFLRLYFITWMMHLLLIGGSRLSWR  127

Query  135  AWHQADRHRRAAEEPVIIYGAGSAGLQLVSSLLSTGDYL---PVAFVDDNPRLHG-TMIR  190
              +++   + +   P +I G+G +G  L+  +++T  Y+   PV  VDD++  +  ++  
Sbjct  128  IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLVVDDDSNKQKMSIAS  186

Query  191  GVPVYPPMR-LGRLIAQLGVGNILLALPTATLGRRREILATLERYPVHVRTLPSMTDLVS  249
            GV V   ++ +  L+ ++ + +I++A+PT +  R REI    E   V+V  +P++ +++S
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  250  GAARLQDIREVDVEDLLGREAVPPDPDLLGRCVTRQSVMITGAGGSIGSELCRQVLAQSP  309
            G   ++ ++ V+VEDLLGR++V  D   +++ +T++++++TGAGGSIGSE+CRQV   +P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  310  RRLVLLERSELALYRIEQELTALASVNDQTIEIIPVLGSVLHRKRMRHSLERYGVDTVYH  369
             R++LL ++E ++Y+I+QEL +L     + IE+IP+++ V ++ RM+  ++ Y    VYH
Sbjct  307  DRIMLLGHGENSIYHIHQELIGL---YKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  370  AAAYKHVPLVEANPVEGVRNNGFGTWHAALAAEDAGVSHFVLVSTDKAVRPTSVMGASKR  429
            AAA KHVPL+E NP E+++NN +GT+++A AA  A VS FV+VSTDKAV P +VMGASKR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  430  IAEFAVQAIAARGSTTRFGIVRFGNVLDSSGSVIPLFRRQIREGGPVTVTHPDATRYFMT  489
            +AE  +Q++    S T F  VRFGNVL+S GSVIPLF++QI  GGPVTVTHP+ TRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  490  IPEAASLVIQSGAMANAGEVFVLDMSEPVRIRDLARRLIQLSGCSVRDQGNAKGDIAIEF  549
            IPEA+ LV+Q+GA+A +GE+FVLDM+ PV+I DLA+ LI+LSG           DI+IEF
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEF  536

Query  550  IGLRPGEKLHEELVQGDDI  568
             G+R+GEKL EEL++ D+I
Sbjct  537  SGIRSGEKLFEELLNKDEI  555

353) Nwat_2113 in NC_014315


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  305 bits (1142),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 208/495 (43%), Positives = 347/495 (71%), Gaps = 17/495 (3%)

Query  69   IGLYRGLWRFASIPDLLNIIRAVGYGALLVALTLFLINRLNGVPRSVLMLYPV---FSLL  125
            ++LY+  W +AS+++L+ I+++V  + +  ++ + ++ +      + L LY +     LL
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLL  117

Query  126  LLAGPRLAYRVWKDRRLTLASNPHRKRVLILGAGRAGDLLVRDMLVEGHYL---PVAFLD  182
            L++G+RL+ R+   R+  ++ +  +K  LI+G+GR+G LL+R+M+ +  Y+   PV  +D
Sbjct  118  LIGGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMM-NTPYMGMEPVLVVD  174

Query  183  DRPDLIGRQV-RGIPVVGLLAQLPAKVGEMAADVVVIAMPSANNRQMRRAVSLCEQAQVS  241
            D ++     +  G+ V G + ++P  V       ++IA+P+ +++++R    LCE ++V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  242  YRTLPRLQDLVAGRASIKELREVAIDDLLGRDEIFLDWDYIRQDLEAKSLLVsggggsig  301
               +P ++++++G   ++ L+ V ++DLLGRD + LD   I ++L  K++LV+G+GGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  302  sELCRQLGRLGPASLVVIDNSEYKLYRLEQELRRKL-PALNLHAYLCDVRDEAGVKEILA  360
            SE+CRQ+ ++ P  +++++++E  +Y+++QEL       +++ + + DV+D   +K ++ 
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  361  CHSPEVVFHAAAYKHVPLLERQIRQAVRNNVFGTRCLAEAARQAGCGTFVLISTDKAVNP  420
               P VV+HAAA KHVPL+E + ++A++NNV+GTR  AEAA+ A  + FV++STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  421  TSVMGASKRVAELLCQDLNRH-SQTRFIVVRFGNVLGSAGSVVPLFQAQIAAGGPVTVTH  479
             +VMGASKRVAE++ Q +N + S+T F+ VRFGNVLGS GSV+PLF+ QI AGGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  480  PEMTRYFMTIPEACHLITQAAMIGKGGEIFVLDMGESVKIIELAEQMIRLSG-QEPEVEI  538
            P MTRYFMTIPEA +L+ QA+ ++ GGEIFVLDMG +VKI++LA ++IRLSG +E ++ I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  539  IYTGLRPGEKLHEEL  553
             ++G+R+GEKL EEL
Sbjct  535  EFSGIRSGEKLFEEL  549

354) CYCME_0466 in NC_021917


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  304 bits (1139),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 212/484 (44%), Positives = 335/484 (70%), Gaps = 19/484 (3%)

Query  115  VHIINWLVTLFVVGGSRMLVRWWL-AGAVPANVSATRNVVVYGAGSSGTQVLDQLRIKN-  172
            + +I W++ L+++GGSR+   W++   +  ++ +  +  ++ G+G +G+ ++ Q+     
Sbjct  107  LYFITWMMHLLLIGGSRL--SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPY  164

Query  173  -GMKVVAFIDDETSLHSRQI-RDIRVRP-FSHLSRLIERYGVKDVLLAMPSVSRSRRNQI  229
             GM  V  +DD+++ +   I  +++V+  + +++ L+ ++ +K +++A+P++S+ R  +I
Sbjct  165  MGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREI  224

Query  230  IALLEPYPVTVKTLPTLAEIAEGEVTVDDIRDVEIEDLLGRDQVLPNKSLMAKNIHNKVV  289
              L E   V V  +P + ++  GE+ V+ ++ VE+EDLLGRD V  + + ++K++ +K +
Sbjct  225  NKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTI  284

Query  290  MVTGAGGSIGAELCRQILQQKPKEIVLFEHSEFALYMIEHDLKSQPISEEVVIKPVLGSV  349
            +VTGAGGSIG+E+CRQ+ +  P  I+L+ H+E ++Y I+++L +    EE+ + P+++ V
Sbjct  285  LVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL-YKEEIEVIPIIADV  343

Query  350  TDSDRVLLACQAAHVETVYHAAAYKHVPLVEQNPREAIKNNILGTLYTAEAALKSKVKDF  409
             D +R+    QA     VYHAAA KHVPL+E NP+EAIKNN+LGT  TAEAA  + V  F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  410  ILISTDKAVRPTNTMGASKRMAELVLQALSNKHRGVSATQFAMVRFGNVLGSSGSVIPLF  469
            +++STDKAV P N MGASKR+AE+V+Q+++N     S T+F  VRFGNVLGS GSVIPLF
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNN---ETSKTDFVAVRFGNVLGSRGSVIPLF  460

Query  470  KKQIKEGGPVTVTDPKIIRYFMTIPEAAQLVIQAGAMAKGGDVFVLDMGDPVKILELAKR  529
            KKQI  GGPVTVT+P + RYFMTIPEA++LV+QAGA+A GG++FVLDMG PVKI++LAK 
Sbjct  461  KKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKN  520

Query  530  MIHLSGLEVKGDDTPHGDIEIKFTGLRPGEKLYEELLIGNDVKNTD-HEKIMRANESMIP  588
            +I+LSG         + DI I F+G+R+GEKL+EELL  +++   +  EKI R++   I 
Sbjct  521  LIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIE  573

Query  589  WEEL  592
             EEL
Sbjct  574  KEEL  577

355) Bcenmc03_0857 in NC_010508


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  304 bits (1138),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 222/536 (42%), Positives = 356/536 (67%), Gaps = 15/536 (2%)

Query  63   FGLYRGLWVFASLPDLMRiakavagggvivmigavmFQPQPIIPRSVLLVSPLMLFLAMG  122
            F+LY+  W +AS+++L+ I K+V+++ V   I   +F  Q+ + R + +++ +M +L +G
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  123  GAR---ALYRATkeyylygglvgkgkpvlvlgagTAGASLARELSRSGEWRLVGLL--DD  177
            G+R    +YR T                       +G+ L R++  +    +  +L  DD
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGG-----RGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  178  DVTKQGREI-YGYKVLGSFNDLKHWTDAMKVEYAIIAIPSASVETQRRVATLCVRAGVKA  236
            D  KQ   I  G KV G ++D+ +     ++   IIAIP+ S +  R +  LC  + V  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  237  MVLPSLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSIGS  296
              +P++  +M+G+  +++++++++EDLLGRD+V +D + +   L  + ++VTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  297  ELCRQILRFAPAQLVAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLLLDQVMSR  355
            E+CRQ+ +F+P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   + +VM  
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  356  HAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAVNP  415
              P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  TNVMGASKRLAEMACQALQQSSGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTH  475
             NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  476  PEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACDLIRLYGFSEEQIRI  535
            P +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA +LIRL G+ EE+I I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  536  EFTGLRPGEKLYEELLADDEATTRTPHPKLRIARAREVP-DNFLDELLPWLMQHRV  590
            EF+G+R+GEKL+EELL  DE        K+  ++ + +  +++ + +   L+++ V
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

356) CAP2UW1_0118 in NC_013194


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  304 bits (1139),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 191/455 (42%), Positives = 315/455 (70%), Gaps = 16/455 (3%)

Query  116  MLAILYVGTARFLARSYFLRAERAEDSRKRVAIYGAGSAGTQLAYALRAGREYL---PVA  172
            M+ +L +G +R L++  + ++  + +++K+ ++  +G+ G  L         Y+   PV 
Sbjct  113  MMHLLLIGGSR-LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  173  FVDDNAALQRIEVA-GLRVQSPDQLMPMMAAGRIEEVLLAIPSASRSRRAEIIGSL-EGL  230
             VDD++  Q++ +A G++VQ+  + +P +        ++   ++   +R   I  L EG 
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  231  HCKVRLVPGMADVVSGNVTADAIREVEIEDLLGRESVAPDAALLGRCVTGKVVMVSGAGG  290
            +  V  +P + +V+SG++  + ++ VE+EDLLGR++V  D A +++ +T K ++V+GAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  291  SIGAELCRQIVQLRPSRLVLMERSEFALYSIEQELATLCVGGSACVELVPVLGSVLHQKR  350
            SIG+E+CRQ+ ++ P R++L+ ++E ++Y I+QEL  L       +E++P+++ V ++ R
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDKER  348

Query  351  NEMVMKSFGVQTVYHAAAYKHVPLVEHNPIEGLRNNAVGTRRMAEAALAAGVGTFVLIST  410
               VM+++    VYHAAA KHVPL+E NP E+++NN +GTR  AEAA  A V+ FV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  411  DKAVRPTNVMGASKRLAELILQALARSGGGTRFCMVRFGNVLGSSGSVVPLFRRQIAAGG  470
            DKAV P NVMGASKR+AE+++Q++    + T F  VRFGNVLGS GSV+PLF++QI AGG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  471  PITLTHAEITRYFMTIPEAAQLVIQAGSMGEGGEVYVLDMGKPVRIIDLARRMVHLSGLE  530
            P+T+TH+ +TRYFMTIPEA++LV+QAG+++ GGE++VLDMGKPV+I+DLA+ +++LSG  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG--  526

Query  531  VRDEEHPDGDIAIEVVGLRPGEKLYEELLIGENVE  565
                   + DI+IE  G+R+GEKL+EELL  ++++
Sbjct  527  -----YKEEDIGIEFSGIRSGEKLFEELLNKDEIH  556

357) Theba_2013 in NC_017934


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  304 bits (1141),  Expect = 9e-84, Method: Compositional matrix adjust.
 Identities = 240/592 (41%), Positives = 386/592 (66%), Gaps = 32/592 (5%)

Query  11   KRNLLLLVVDSLIVYFA-----YILGMYFR-YGI---FTLDEPEFFVNGIYFSAFIVVSL  61
            +R ++LL +DS+IV F+     YIL  +F+ Y+I   +      ++ + ++   F     
Sbjct  8    QRFMMLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIF-----  62

Query  62   ILNGVYRIAWSYSYFRDYFIILRAVIVGY-AIGFLAGRFLNLFEIRFLTVPFTVSTMAAI  120
               ++Y+ AW Y+   + ++I+++V  +  A G++   F +  +  FL + F    M  +
Sbjct  63   ---DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ--QAPFLRLYFITWMMHLL  117

Query  121  -ISVFLLIWSRFFWLSILSRNHPIVSSEERVFIVGAGDAGTSIAEELSRHPENGLVVGFI  179
             I+   L W R+++ +++S++    +     +IVG+G +G+ +  ++   P  G+   ++
Sbjct  118  LIGGSRLSW-RIYRKTFISKE----GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV  172

Query  180  -DDSPKKLRKRI-RGIPVLGNTDEIMPLVEKMGVRKVIIAIPSADASTLRRIFSKIDVSK  237
             DD ++K +  I  G+ V G   +I  LV K  ++K+IIAIP+     LR I    + ++
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  238  VKAQTLPSITEIMDGKAKLGYLREINIEDLLGRESVQIDLNSLKDYVVGRTVLITGAGGS  297
            V    +P+I ++M G   +  L+ +++EDLLGR++V++D+ S+   +  +T+L+TGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  298  IGSELCRQIaplgpgrlllagkgENSIYEISQEIGSLF-PDLKVSQLIGDVADRSRMRYI  356
            IGSE+CRQ+  + P+R++L G GENSIY+I QE+ +L+  ++ V  +I+DV D+ RM+ +
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKV  352

Query  357  FNKMRPQVVFHAAAHKHVPIMEENPTEAFRVNSLGTYNIASLADEFGVETMVVISTDKAV  416
             +  +P VV+HAAAHKHVP+ME NP EA++ N LGT N A  A    V   V++STDKAV
Sbjct  353  MQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  417  RPSSVMGVSKRIAEEFVRSISS-RSNTKFGIVRFGNVLGSRGSVIPLFKKQIQSGGPVTV  475
             P++VMG SKR+AE  ++S+++  S+T F  VRFGNVLGSRGSVIPLFKKQI++GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  476  TDPRMTRYFMTIPEAVTLVLQAGAFSGDGDVFVLDMGEPVKISSLANEMITLAGYIPHQE  535
            T+P MTRYFMTIPEA  LVLQAGA++ +G++FVLDMG PVKI  LA+++I L+GY  +++
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEED  531

Query  536  IEIKYTGVRPGEKLFEELVLTNEELIQTKHPKIFRLKMNEAMDEEALLKTVS  587
            I I ++G+R+GEKLFEEL+  +E   +    KI+R K+ + ++ E L + + 
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKV-QKIEKEELYNKID  582

358) Calkr_2286 in NC_014721


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1136),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 226/499 (46%), Positives = 347/499 (70%), Gaps = 15/499 (3%)

Query  75   YKIIWRYATTNELIRLLLVVLIGSSLASFIIYIVNLRIP-RSIYLLSYVLITISLLVSRI  133
            Y   W YA+ +ELI ++  V  +   +++I+ I   + P   +Y+++ ++  + +  SR+
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRL  124

Query  134  IY-MYINEKRKKFQSYKIERQKRALIIGAGSAGQLILNELKKHSEVGILPVAFLDDDENK  192
               +Y    RK F S K  ++K +LI+G+G +G L++ ++ + + +G+ PV  +DDD NK
Sbjct  125  SWRIY----RKTFIS-KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  193  HYRYI-NGVIVLGKIEELPYVVEEKSIDLVIYAIPSAHPSLLRKVLNLCNKAKVELRTIP  251
            +   I +GV V G I ++P +V   +I  +I AIP+     LR + +LC+ ++VE+  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  252  GVYELIRNPSALNVRNIRKVNLEDLLRREPIKIDLKDISEFLVNKRVLVTGAGGSIGSEI  311
             + +++  ++ ++V +++KV++EDLL R+P+ +D+  IS  L +K +LVTGAGGSIGSEI
Sbjct  240  NIENVM--SGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  312  VRQVLRFEPAEVICLDIYENTLYDLQQELINTPYISKCKFL--IGSIRDINRLENIFKQY  369
             RQV +F P  ++ L+  EN++Y+++QELI   Y      +  I+ ++D +R+ ++ + Y
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGL-YKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  370  KPEIVFHAAAHKHVPLMEDSPQEAVKNNIFGTLNLVEISDKYNIKKFIMISTDKAVNPKS  429
            KP +V+HAAAHKHVPLME +PQEA+KNN++GT N  E +   ++ KF+M+STDKAVNP +
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  430  VMGMTKRICELLVQA-YNSKSDTEFSIVRFGNVLGSNGSVVPLFMKQIEKGGPVTVTHEE  488
            VMG +KR+ E+++Q+  N  S T+F  VRFGNVLGS GSV+PLF KQIE GGPVTVTH  
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  489  VRRYFMTINEavqlvlqaaaFAKGGEVFVLDMGEPVKIIDLARDLIRIYGYEPDVDIKIE  548
            + RYFMTI EA +LVLQA+A+A GGE+FVLDMG PVKI+DLA++LIR+ GY  + DI IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIE  535

Query  549  IIGLRPGEKLYEELLIDKE  567
            + G+R+GEKL+EELL   E
Sbjct  536  FSGIRSGEKLFEELLNKDE  554

359) Calla_0167 in NC_015949


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1137),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 226/499 (46%), Positives = 347/499 (70%), Gaps = 15/499 (3%)

Query  63   YKIIWRYATTNELIRLLLVVLIGSSLASFIIYIVNLRIP-RSIYLLSYVLITISLLVSRI  121
            Y   W YA+ +ELI ++  V  +   +++I+ I   + P   +Y+++ ++  + +  SR+
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRL  124

Query  122  IY-MYINEKRKKFQSYKIERQKRALIIGAGSAGQLILNELKKHSEVGILPVAFLDDDENK  180
               +Y    RK F S K  ++K +LI+G+G +G L++ ++ + + +G+ PV  +DDD NK
Sbjct  125  SWRIY----RKTFIS-KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  181  HYRYI-NGVIVLGKIEELPYVVEEKSIDLVIYAIPSAHPSLLRKVLNLCNKAKVELRTIP  239
            +   I +GV V G I ++P +V   +I  +I AIP+     LR + +LC+ ++VE+  +P
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMP  239

Query  240  GVYELIRNPSALNVRNIRKVNLEDLLRREPIKIDLKDISEFLVNKRVLVTGAGGSIGSEI  299
             + +++  ++ ++V +++KV++EDLL R+P+ +D+  IS  L +K +LVTGAGGSIGSEI
Sbjct  240  NIENVM--SGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  300  VRQVLRFEPAEVICLDIYENTLYDLQQELINTPYISKCKFL--IGSIRDINRLENIFKQY  357
             RQV +F P  ++ L+  EN++Y+++QELI   Y      +  I+ ++D +R+ ++ + Y
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGL-YKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  358  KPEIVFHAAAHKHVPLMEDSPQEAVKNNIFGTLNLVEISDKYNIKKFIMISTDKAVNPKS  417
            KP +V+HAAAHKHVPLME +PQEA+KNN++GT N  E +   ++ KF+M+STDKAVNP +
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  418  VMGMTKRICELLVQA-YNSKSDTEFSIVRFGNVLGSNGSVVPLFMKQIEKGGPVTVTHEE  476
            VMG +KR+ E+++Q+  N  S T+F  VRFGNVLGS GSV+PLF KQIE GGPVTVTH  
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  477  VRRYFMTINEavqlvlqaaaFAKGGEVFVLDMGEPVKIIDLARDLIRIYGYEPDVDIKIE  536
            + RYFMTI EA +LVLQA+A+A GGE+FVLDMG PVKI+DLA++LIR+ GY  + DI IE
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIE  535

Query  537  IIGLRPGEKLYEELLIDKE  555
            + G+R+GEKL+EELL   E
Sbjct  536  FSGIRSGEKLFEELLNKDE  554

360) SCD_n02873 in NC_022357


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1137),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 225/502 (45%), Positives = 349/502 (70%), Gaps = 19/502 (3%)

Query  61   FGLYRGVWRFASLPDLKRIIMAVGVAGLSvpvvlymvhvpvavpRSvlvldp-lllvmvv  119
            F+LY+  W +AS+++L  I+ +V  + ++  +++ +     +  R  L +   ++ ++++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  120  GGSRFVYRSWKEHHLYR--FA--DAERQPVLVLGAGEIAAGLVKELSRSKEWRVEGLL--  173
            GGSR+   SW+   +YR  F   ++ ++P L++G+G  ++ L++++  +    +E +L  
Sbjct  120  GGSRL---SWR---IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  174  DDDPAMVG-RLIQGVKVLGRVDELPKWAGRYDVHVAIIAMPSASHQARRRAVKLCSSANV  232
            DDD+      +  GVKV G + ++P    ++++   IIA+P+ S+Q  R   KLC ++NV
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  233  KSMTVPAFDDLASGRVTVSQIRQVELDDLLGRDPVTLDEEGLHGLLTGQPVMVTGAGGSI  292
                +P ++++ SG + V+++++VE++DLLGRDPV LD  ++   LT + ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  293  GSELCRQIARFEPACLVLFELNEFVLYRMEQEFAEKL-PQLRIVCAIGDVKDEARLDQVM  351
            GSE+CRQ+ +F P  ++L+   E  +Y+++QE+      ++ ++  I+DV+D  R+ +VM
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  352  CQYapaaifhaaaYKHVPLMEQENAWQAVLNNVLGTCTVARAAMRHGVKKFVLISTDKAV  411
              Y P  ++HAAA KHVPLME  N+ +A+ NNVLGT   A AA    V KFV++STDKAV
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  412  NPTNVMGATKRLAEMVCQGLQQEGG-TRFVMVRFGNVLGSTGSVIPKFQEQIVHGGPITV  470
            NP NVMGA+KR+AEMV Q++++E + T FV VRFGNVLGS GSVIP F+ QI  GGP+TV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  471  THPEITRYFMSIPEAAQLVLQAGLMGEGGEIFVLDMGEPVRIVELAKDMIRLSGFSEGDI  530
            THP +TRYFM+IPEA++LVLQAG ++ GGEIFVLDMG PV+IV+LAK++IRLSG+ E DI
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDI  532

Query  531  PIVFTGLRPGEKLYEELLADDE  552
             I F+G+R+GEKL+EELL  DE
Sbjct  533  GIEFSGIRSGEKLFEELLNKDE  554

361) wbgZ in NC_009348


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1137),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 200/462 (44%), Positives = 320/462 (70%), Gaps = 33/462 (7%)

Query  98   VILVGGVRL---FFRALLNTTRLARTQVLIYGAGSSGRQLQMALLQGNEFY----PVAFV  150
            ++L+GG RL   ++R  + +    +   LI G+G +G  L   +++    Y    PV  V
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP--YMGMEPVLVV  173

Query  151  DDDSTKQ------GCVIQGCTVYHSAQLPTLIDHYGVQKILLAMPSSTRARRQEVINALE  204
            DDDS KQ      G  +QGC      ++P L+  + ++KI++A+P+ ++ R +E+ +  E
Sbjct  174  DDDSNKQKMSIASGVKVQGCI----KDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  205  PLTCEVLSIPGMADLVNGTARIDQLNEVSIDDLLGRDPVEPVTKLMEANITGKAVMITGA  264
                EV+ +P + ++++G   +++L+ V ++DLLGRDPVE     +  ++T K++++TGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  265  GGSIGSELCRQILRCR--PSALVLFELSEYALYVLHKNLREQCQREGIETDLVPLLGSVQ  322
            GGSIGSE+CRQ+  C+  P  ++L+  +E ++Y +H++L    + E    +++P+++ VQ
Sbjct  290  GGSIGSEICRQV--CKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQ  344

Query  323  RQHRLKTVMQSFRIQTVYHTAAYKHVPLVEFNIIEGVRNNVFGTLYAAQAAIEAGVETFV  382
             ++R+K VMQ+++   VYH+AA KHVPL+E+N  E+++NNV+GT  +A+AA  A V  FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  383  LISTDKAVRPTNTMGASKRLAELILQALTREKHNTRFCMVRFGNVLGSSGSVVPLFRQQI  442
            ++STDKAV P N MGASKR+AE+++Q++  E  +T F  VRFGNVLGS GSV+PLF++QI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  443  DKGGPITLTHPDIIRYFMTIPEAAQLVIQAGAMGEGGDVFVLDMGQPVRIIDLAKRMIRL  502
            + GGP+T+THP++ RYFMTIPEA++LV+QAGA++ GG++FVLDMG+PV+I+DLAK +IRL
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  503  SGLTLRDELRPDGDIAIEVTGLRPGEKLYEELLIGDDARGTD  544
            SG         + DI+IE +G+R+GEKL+EELL  D+ +  +
Sbjct  525  SGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

362) capD in NC_020055


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1135),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 220/511 (44%), Positives = 348/511 (69%), Gaps = 31/511 (6%)

Query  64   GLYRGMWRYTSLRDLWHILEATFLQSLILVTVVLYKFGFDG-FSRGIFIIDWMLTVFMCG  122
            +LY+  W Y+S+ +L  I+ +    S++   +++  F  ++ F R +++I WM+ +++ G
Sbjct  63   DLYHRAWEYASVSELILIVKSV-TSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  123  GFRV---LIRSFYAYRDGNAITLSPESCPDNGSNVLIIGAGRAGEKVVREIKGSGQLKYS  179
            G R+   + R  +  ++G+                LI+G+GR+G  ++R++  +  +   
Sbjct  121  GSRLSWRIYRKTFISKEGKK------------KPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  180  PVGFLDNDKSKRGRTI-HGVPVLGQLSDLHDLVENKCVNEILIAVAEASGEQMREIIDNC  238
            PV  +D+D +K+  +I  GV V G + D+ +LV +  ++ I+IA++  S +++REI   C
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  239  KKTGLP-YKILPGMDEIINGKVGIKALRDVSYQDLLGRSQVQLDTTSISKYLSGKTVLVT  297
              T +  +K +P ++++++G + ++ L+ V  +DLLGR  V+LD +SISK L+ KT+LVT
Sbjct  229  EGTNVEVFK-MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  298  GCGGSIGSELVRQVVRFKPAKIILVDASEANLYGIQMEL----HHELKFHDYVTVLGSVQ  353
            G GGSIGSE+ RQV +F P +I+L++ +E ++Y I+ EL     +E+   + + +++ VQ
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEI---EVIPIIADVQ  344

Query  354  DFELLDSTFEKYKPHTIFHAAAYKHVPMMERNPWQAVQNNICGTRNVMTAADKHGVDRFV  413
            D E +    + YKP  ++HAAA KHVP+ME NP +A++NN+ GTRN   AA    V +FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  414  IVSTDKAVRPTNIMGASKRVTELLMHLFPN--SKTTFMAVRFgnvvgssgsvvPLFRRQI  471
            +VSTDKAV P N+MGASKRV+E++++   N  SKT F+AVRFGNV+GS GSV+PLF++QI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  472  EKGGPVTVTHPNVTRYFMSISEAAQLILQAGVMAEGGEIFILEMGLPVKIADMARDLIRL  531
            E GGPVTVTHP +TRYFM+I+EA++L+LQAG +A GGEIF+L+MG PVKI D+A++LIRL
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  532  SGKEPDKDIEIVFTGLREGEKLYEELITDGE  562
            SG   + DI I F+G+R GEKL+EEL+  +E
Sbjct  525  SGYK-EEDIGIEFSGIRSGEKLFEELLNKDE  554

363) Desal_3620 in NC_012881


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1136),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 219/511 (43%), Positives = 350/511 (69%), Gaps = 31/511 (6%)

Query  64   GLYRGMWRYTSLRDLWHILEATFLQSLILVTVVLYKFGFDG-FSRGVFIIDWMLTVFMCG  122
            +LY+  W Y+S+ +L  I+ +    S++   +++  F  ++ F R +++I WM+ +++ G
Sbjct  63   DLYHRAWEYASVSELILIVKSV-TSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  123  GVRV---MIRSFYAFKDGNSIQFSPENCPVDGNNALIIGAGRAGEKVVREIRSSGQLKYL  179
            G R+   + R  +  K+G+             + +LI+G+GR+G  ++R++ ++  +   
Sbjct  121  GSRLSWRIYRKTFISKEGKK------------KPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  180  PVGFLDNDKTKRGRTI-HGVPVLGPLSDLQELVKNKCVNEILIAVAEASGAQMREIIDAC  238
            PV  +D+D  K+  +I  GV V G + D+ ELVK+  ++ I+IA++  S  ++REI   C
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  239  KQTGLP-YKILPGMDEIINGKVGIKALRDVSYQDLLGRAPVQLDTTAISDYLSGKTVLVT  297
              T +  +K +P ++++++G + ++ L+ V  +DLLGR PV+LD ++IS  L+ KT+LVT
Sbjct  229  EGTNVEVFK-MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  298  GCGGSIGSELVRQVVRFNPAKLILVDSSEANLYGIQMEL----HHELKFHNYVTVLGSVQ  353
            G GGSIGSE+ RQV +F P +++L++ +E ++Y I+ EL     +E+   + + +++ VQ
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEI---EVIPIIADVQ  344

Query  354  DEQLMDETFGNYKPHTVFHAAAYKHVPMMERNPWQAVHNNICGTKNVMTAADKHGVARFV  413
            D + M      YKP  V+HAAA KHVP+ME NP +A+ NN+ GT+N   AA    V++FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  414  IVSTDKAVRPTNIMGASKRVTELLMRLFHD--SKTTFMAVRFgnvvgssgsvvPLFRRQI  471
            +VSTDKAV P N+MGASKRV+E++++  ++  SKT F+AVRFGNV+GS GSV+PLF++QI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  472  EKGGPVTVTHKDVTRYFMSISEAAQLILQAGVMADGGEIFILEMGEPVKIADMARDLIRL  531
            E GGPVTVTH ++TRYFM+I+EA++L+LQAG +A GGEIF+L+MG PVKI D+A++LIRL
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  532  SGKEPDKDIEIIFTGLREGEKLYEELITEGE  562
            SG   + DI I F+G+R GEKL+EEL+  +E
Sbjct  525  SGYK-EEDIGIEFSGIRSGEKLFEELLNKDE  554

364) Bcen_0408 in NC_008060


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1137),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 222/536 (42%), Positives = 356/536 (67%), Gaps = 15/536 (2%)

Query  63   FGLYRGLWVFASLPDLMRiakavagggvivmigavmFQPQPIIPRSVLLVSPLMLFLAMG  122
            F+LY+  W +AS+++L+ I K+V+++ V   I   +F  Q+ + R + +++ +M +L +G
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  123  GAR---ALYRATkeyylygglvgkgkpvlvlgagTAGASLARELSRSGEWRLVGLL--DD  177
            G+R    +YR T                       +G+ L R++  +    +  +L  DD
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGG-----RGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  178  DVTKQGREI-YGYKVLGSFNDLKHWTDAMKVEYAIIAIPSASVETQRRVATLCVRAGVKA  236
            D  KQ   I  G KV G ++D+ +     ++   IIAIP+ S +  R +  LC  + V  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  237  MVLPSLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSIGS  296
              +P++  +M+G+  +++++++++EDLLGRD+V +D + +   L  + ++VTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  297  ELCRQILRFAPAQLVAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLLLDQVMSR  355
            E+CRQ+ +F+P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   + +VM  
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  356  HAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAVNP  415
              P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  TNVMGASKRLAEMACQALQQSSGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTH  475
             NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  476  PEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACDLIRLYGFSEEQIRI  535
            P +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA +LIRL G+ EE+I I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  536  EFTGLRPGEKLYEELLADDEATTRTPHPKLRIARAREVP-DNFLDELLPWLMQHRV  590
            EF+G+R+GEKL+EELL  DE        K+  ++ + +  +++ + +   L+++ V
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

365) Bcen2424_0887 in NC_008542


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1137),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 222/536 (42%), Positives = 356/536 (67%), Gaps = 15/536 (2%)

Query  63   FGLYRGLWVFASLPDLMRiakavagggvivmigavmFQPQPIIPRSVLLVSPLMLFLAMG  122
            F+LY+  W +AS+++L+ I K+V+++ V   I   +F  Q+ + R + +++ +M +L +G
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  123  GAR---ALYRATkeyylygglvgkgkpvlvlgagTAGASLARELSRSGEWRLVGLL--DD  177
            G+R    +YR T                       +G+ L R++  +    +  +L  DD
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGG-----RGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  178  DVTKQGREI-YGYKVLGSFNDLKHWTDAMKVEYAIIAIPSASVETQRRVATLCVRAGVKA  236
            D  KQ   I  G KV G ++D+ +     ++   IIAIP+ S +  R +  LC  + V  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  237  MVLPSLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSIGS  296
              +P++  +M+G+  +++++++++EDLLGRD+V +D + +   L  + ++VTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  297  ELCRQILRFAPAQLVAFDLSEYAMYRLTEELRERF-PDLPVVPIIGDAKDSLLLDQVMSR  355
            E+CRQ+ +F+P +++ ++ +E ++Y++ +EL   +  ++ V+PII+D +D   + +VM  
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  356  HAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAVNP  415
              P +V+HAAA KHVPLME  N+ +A++NNVLGT   A AA   +V  FV++STDKAVNP
Sbjct  356  YKPYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  416  TNVMGASKRLAEMACQALQQSSGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTH  475
             NVMGASKR+AEM  Q++++ +++T+F +VRFGNVLGS GSVIP F++QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  476  PEITRFFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACDLIRLYGFSEEQIRI  535
            P +TR+FMTIPEAS+LVLQA++++ GGEIF+LDMG PVKIVDLA +LIRL G+ EE+I I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  536  EFTGLRPGEKLYEELLADDEATTRTPHPKLRIARAREVP-DNFLDELLPWLMQHRV  590
            EF+G+R+GEKL+EELL  DE        K+  ++ + +  +++ + +   L+++ V
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESV  590

366) LLO_0936 in NC_013861


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1136),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 220/528 (42%), Positives = 363/528 (69%), Gaps = 25/528 (4%)

Query  70   FKTYRGLWRFFSLNDVIRILKASVTATTIAIPVLYLTSILHELPRSIFPLYCVI-LTAFL  128
            F  Y+  W + S++++I I+K SVT++ +A  ++   +I+ + + +++ LY +  +  +L
Sbjct  62   FDLYHRAWEYASVSELILIVK-SVTSSIVATGII--VPIFTQQA-PFLRLYFITWMMHLL  117

Query  129  --CSARLLRRLYWDRRARGSKTTEMKRVLIVGAGMAGEGLVRDLKRSNQY---KPIGFID  183
               ++RL +R+Y  R++  SK    K  LIVG+G +G  L+R++  +  Y    P+  +D
Sbjct  118  LIGGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMM-NTPYMGMEPVLVVD  174

Query  184  DNLSKKGLEV-HGVPVLGVTSQITMRVKEYAIDLifiaipsasssiMRRIVTACESSKVP  242
            D+ +K+ + +  GV V G   +I   VK + I  I+IAIP+ S   +R I   CE+++V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  243  FSTLPGLNDLAAGRVEVNALRPVNIEDLLGREQVYLQWDKLIAEISEKRVLVTGGGGSIG  302
               +P ++++ +G +EVN L+ V++EDLLGR+ V L+   +  E+++K +LVTG+GGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  303  SELCRQILALKPQSLVIVENSEFNLYQIELEL----KQNFPDIPLQLKLVNITDEIAINQ  358
            SE+CRQ+  + P+ ++++ ++E ++Y+I+ EL    K+++  IP+   + ++ D   +++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPI---IADVQDKERMKK  351

Query  359  LFNEYSPEIVFHAAAYKHVPLLENQIRVAVVNNILGTQIVAKASVAAHTEKFILISTDKA  418
            + + Y P +V+HAAA KHVPL+E + + A+ NN+LGT+  A A+  A+  KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  419  VNPTNIMGTTKRVAEIFCQNLDSRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQNGGPIK  477
            VNP N+MG++KRVAE+  Q++++   KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+ 
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  478  VTHPDMQRYFMTIPEACQLILQAMVNGKGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  536
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE--  529

Query  537  KDIMIEYTGLRPGEKLFEELFHESEQLESTEHEKLFKAKFRELNWDEL  584
             DI IE++G+R+GEKLFEEL++  E       EK++++K + ++ +EL
Sbjct  530  EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

367) Rleg_6005 in NC_012852


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  303 bits (1134),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 215/519 (42%), Positives = 350/519 (68%), Gaps = 36/519 (6%)

Query  69   VMGMYRAIFRYANMAAFITVLKAIAIYGFAFMTIFTALSVPGVPRTVGILQPFLL-----  123
            + ++Y+    YA+++ +I ++K+++        + T++ VP   +   +L+ +++     
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTS-----SIVATGIIVPIFTQQAPFLRLYFITWMMH  115

Query  124  LIAIGLSRLSIRYWLGDAYQR-ILHKNTLAK-VLIYGAGKAGRQLAGALINSAELNVVGY  181
            L+ IG SRLS   W    Y++ ++ K+   K  LI G+G++G  L   ++N++ + +   
Sbjct  116  LLLIGGSRLS---W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  182  L---DDDPRLKGGVMGGLPIYD-PSDLPVLAESLGVHNVLLALPSASRQRRNEILEHIRK  237
            L   DD  + K ++ +G+ + +   D+P L   + + ++++A+P+ S+QR  EI      
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  238  ARVNVRTLPDLTALAQGRIAVSDIRELEIEDLLGREAVAPRQELLDKAMRKKVVMVTGAG  297
            + V+V  +P++  +  G I V+ ++ +E+EDLLGR++V      + K +  K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  298  GSIGGELCRQILRNEPSSLILIDQNEFALYNIHAELQKLAELYKHENTQIVPILCSVRDQ  357
            GSIG+E+CRQ+ +  P  ++L+++ E ++Y+IH   Q L  LYK E+ +++PI+  V+D+
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIH---QELIGLYK-EEIEVIPIIADVQDK  346

Query  358  DRMEHVMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLVAARAANKCGVSNFVLI  417
            +RM  VMQ+ +P  +YHAAA KHVPL+E N+ E+IKNNV+GT  +A AA+   VS+FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  418  STDKAVRPTNVMGASKRLAEMVLQALAAESATDRMRTNFSMVRFGNVLGSSGSVVPLFRQ  477
            STDKAV P NVMGASKR+AEMV+Q++  E++    +T+F  VRFGNVLGS GSV+PLF++
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  478  QIKEGGPVTLTHPDITRYFMTISEASQLVIQAGAMADGGDVFLLDMGEPVRIADLARKMV  537
            QI  GGPVT+THP++TRYFMTI+EAS+LV+QAGA+A GG++F+LDMG PV+I DLA++++
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  538  ELSGLAVRDENNPEGDIELSVTGLRPGEKLYEELLIGDN  576
             LSG         E DI +  +G+R+GEKL+EELL  D+
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

368) R2APBS1_1806 in NC_020541


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  302 bits (1132),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 197/454 (44%), Positives = 314/454 (70%), Gaps = 9/454 (1%)

Query  133  WKDSRNDLLQNQVAKR-VLIVGADRAGEVLSRDLHRDNRY----AVVGFVDDKPSLRGAS  187
            W+  R+ ++ ++  K+  LIVG++R+G +L R++  +  Y    +V+   DD    + + 
Sbjct  126  WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQM-MNTPYMGMEPVLVVDDDSNKQKMSI  184

Query  188  INGHPMLGQLDQLPEVAREVAIDMLLIALPGASTSEMRRVVSLCDATGLPYRTVPRLEDV  247
             +G  + G + ++PE+ +   I  ++IA+P  S   +R +  LC++T +    +P +E+V
Sbjct  185  ASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENV  244

Query  248  VAGRAQFNQIKEVAIEDLLGRDTVELDWTAIRETLSGKCVLVTGGGGSIGSELCRQVARL  307
            ++G  + N++K V +EDLLGRD VELD ++I   L+ K +LVTG+GGSIGSE+CRQV ++
Sbjct  245  MSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKF  304

Query  308  GAQSLTVIEQSEYNLYRISQELRADFPELI-FDGILANCGDQVAMRKAFADVRPQVVFHA  366
             ++ + ++ ++E ++Y+I QEL + + E I    I+A+  D+  M+K     +P VV+HA
Sbjct  305  TPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHA  364

Query  367  AAYKHVPLLQNQLRAAFRNNALGTRTVADAACEAGVECFVLISTDKAVNPTSVMGACKRI  426
            AA KHVPL++ + + A++NN LGTR  A+AA  A V  FV++STDKAVNP +VMGA KR+
Sbjct  365  AAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRV  424

Query  427  AEIYCQNLDAHAA-TRFMTVRFGNVLDSAGSVVPLFRRQIRDGGPVTVTHPEISRYFMTI  485
            AE+  Q+++ +++ T F++VRFGNVL+S GSV+PLF++QI  GGPVTVTHP ++RYFMTI
Sbjct  425  AEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTI  484

Query  486  PEACQLILQTASIGKGGEIFALDMGEPVKIRDLAEQMIRLAGKKPGSEIPIVYTGLRAGE  545
            PEA +L+LQ+++++ GGEIF LDMG PVKI DLA ++IRL+G K   +I I ++G+R+GE
Sbjct  485  PEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGE  543

Query  546  KLFEELFHPLENYSATAHAKIFLAQHREVSWELL  579
            KLFEEL++  E  +     KI+ ++ + +  E L
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

369) Kole_1759 in NC_012785


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  301 bits (1127),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 232/527 (45%), Positives = 346/527 (66%), Gaps = 19/527 (3%)

Query  64   GVYSIAWSYSSFRDYWVILRgafigyaagfafgRLMLLAGMDVFTVPFTVA---TMTFIG  120
            ++Y  AW Y+S  +  +IL    +  +   +   + +++    F   + ++    + +IG
Sbjct  63   DLYHRAWEYASVSE--LILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  121  ATFLIIWSRIFWLTYLFLKIERSGKSLDRILIVGAGDAGTTLVDEITRHPEYGR-VVGFV  179
            ++ L  W RI++ T+    I + GK     LIVG+G +G+ L+ ++   P  G   V  V
Sbjct  121  GSRLS-W-RIYRKTF----ISKEGKK-KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  180  DDSPRKQKKRI-RGIPVLGTTEEIMQIVDKYQINRVIIAIPSATSDQMRRIMYRIDRNKV  238
            DD + KQK  I  G+ V G   +I ++V K++I+++IIAIP+ + +++R I    +  +V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  239  RVQTLPGLTEIIDRKARLGYLRDINIEDLLGREPVEIDKKSLRGYITGKRVLVTGAGGSI  298
             V  +P + +++     +  L+ +++EDLLGR+PVE+D  S+   +T K +LVTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  299  GSELCRQIAYLEPKALIILGKGENSIHNIEEELKEKY-PDLKVHRVIGDVQDKDRMEFII  357
            GSE+CRQ+  + P  +++LG GENSI +I++EL   Y  ++ V  +I+DVQDK+RM  ++
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  358  ATFKPEIIFHAAAHKHVPIMEENPTEAFRVNTLGTYILASIAEKYGCERFVMISTDKAVR  417
             ++KP +++HAAAHKHVP+ME NP EA++ N LGT   A  A      +FVM+STDKAV 
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  418  PSSIMGVSKRLAEQILKSIAR-YSKMRIGIVRFGNVLGSRGSVVPKFKKQIENGGPVTVT  476
            P+++MG SKR+AE +++S+    SK  +  VRFGNVLGSRGSV+P FKKQIE GGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  477  DPRMTRYFMTIPEAVSLVMQAGAYAKNGDVFVLDMGKPVKISDLARDMITLAGYVPDQEI  536
            +P MTRYFMTIPEA  LV+QAGA A  G++FVLDMGKPVKI DLA+++I L+GY  +++I
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDI  532

Query  537  KIEYIGARPGEKLFEELSLDSEKFDKTPHPKIFRLKDDREFMEGEEL  583
             IE+ G R+GEKLFEEL    E        KI+R K ++  +E EEL
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQK--IEKEEL  577

370) REMIM1_CH00792 in NC_021905


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  301 bits (1126),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 350/524 (67%), Gaps = 36/524 (6%)

Query  57   VMGMYRAIFRYANMAAFIAVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLL-----  111
            + ++Y+    YA+++ +I ++K+++   VA     T++ VP   +   +L+ +++     
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVA-----TGIIVPIFTQQAPFLRLYFITWMMH  115

Query  112  LIAIGLSRLGIRYWLGDTYQRIL--HQNTLAKVLIYGAGNAGRQLAGALTNSAELNVVGY  169
            L+ IG SRL+   W    Y++ +   +      LI G+G +G  L   + N++ + +   
Sbjct  116  LLLIGGSRLS---W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  170  L---DDDPRLKGGIMGGLPIYDP-SDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRK  225
            L   DD  + K +I +G+ + +   D+P L   + + ++++A+P+ S+QR  EI      
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  226  ARVNVRTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAG  285
            + V+V  +P++  +  G + V+ ++ +E+EDLLGR++V      + K + +K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  286  GSIGGELCRQILRNAPSSLILIDQNEFALYNIHAELLKLAEVYKHEGLQIVPILCSVRDQ  345
            GSIG+E+CRQ+ + +P  ++L+++ E ++Y+IH EL+ L   YK+E ++++PI+  V+D+
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL---YKEE-IEVIPIIADVQDK  346

Query  346  DRMEHIMESWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKYGVSNFVLI  405
            +RM  +M++ +P  +YHAAA KHVPL+E N+ E+IKNNV+GT  TA AA+   VS+FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  406  STDKAVRPTNVMGASKRLAEMVLQALAAELTADRLRTNFSMVRFGNVLGSSGSVVPLFRQ  465
            STDKAV P NVMGASKR+AEMV+Q++  E +    +T+F  VRFGNVLGS GSV+PLF++
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  466  QIKEGGPVTLTHPKITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMV  525
            QI  GGPVT+THP +TRYFMTI+EAS+LV+QAGA+A GG++F+LDMG PV+I DLA++++
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  526  ELSGLTVRDLDNPEGDIELAVTGLRPGEKLYEELLIGDNPETTE  569
             LSG         E DI +  +G+R+GEKL+EELL  D+ +  +
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

371) lpsB2 in NC_010997


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  301 bits (1128),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 348/524 (67%), Gaps = 36/524 (6%)

Query  69   VMGMYRAIFRYAGLAAFIAVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLL-----  123
            + ++Y+    YA+++ +I ++K+++   VA     T++ VP   +   +L+ +++     
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVA-----TGIIVPIFTQQAPFLRLYFITWMMH  115

Query  124  LIAIGLSRLGIRYWLGDTYQRIL--HQNTLAKVLIYGAGNAGRQLAGALTNSAELNVVGY  181
            L+ IG SRL+   W    Y++ +   +      LI G+G +G  L   + N++ + +   
Sbjct  116  LLLIGGSRLS---W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  182  L---DDDPRLKGGIMGGLPIYD-PSDLPVLAEALGVHNVLLALPSASRQRRNEILERIRK  237
            L   DD  + K +I +G+ + +   D+P L   + + ++++A+P+ S+QR  EI      
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  238  ARVNVRTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRKKVVMVTGAG  297
            + V+V  +P++  +  G + V+ ++ +E+EDLLGR++V      + K +  K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  298  GSIGGELCRQILRNAPSSLILIDQNEFALYNIHAELLKLAELYKQESLQIVPILCSVRDQ  357
            GSIG+E+CRQ+ + +P  ++L+++ E ++Y+IH EL+    LYK+E ++++PI+  V+D+
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELI---GLYKEE-IEVIPIIADVQDK  346

Query  358  DRMEHIMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKCGVLNFVLI  417
            +RM  +MQ+ +P  +YHAAA KHVPL+E N+ E+IKNNV+GT  TA AA+   V +FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  418  STDKAVRPTNVMGASKRLAEMVLQALAAEPAVDRVRTNFSMVRFGNVLGSSGSVVPLFRQ  477
            STDKAV P NVMGASKR+AEMV+Q++  E +    +T+F  VRFGNVLGS GSV+PLF++
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  478  QIKDGGPVTLTHPKITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMV  537
            QI  GGPVT+THP +TRYFMTI+EAS+LV+QAGA+A GG++F+LDMG PV+I DLA++++
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  538  ELSGLAVRDEDNPEGDIELSVTGLRPGEKLYEELLIGDNPETTE  581
             LSG         E DI +  +G+R+GEKL+EELL  D+ +  +
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

372) capD in NC_004557


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  301 bits (1128),  Expect = 8e-83, Method: Compositional matrix adjust.
 Identities = 234/525 (45%), Positives = 356/525 (68%), Gaps = 21/525 (4%)

Query  53   FNKMFKLYDSIWKYAsieeli-siiyslslsnvviilyNYFVTYKLLETKYMRFPYAAHI  111
            F ++F LY+  W YAS+ ELI  +    S      I+   F      ++ ++R+ + +  
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFIT--  111

Query  112  IFWILSVAFLGGTRF---LYRVVGEIQSDkicnkkknklliigagdaaalliKEIKKNTN  168
              W++ + ++GG+R+   +YR     ++    + KK+  LI+G+G +++LLI+++ +   
Sbjct  112  --WMMHLLLIGGSRLSWRIYR-----KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPY  164

Query  169  LNYEIIGLIDDNEEKIGKTI-NGIKVIGSRRDiiniseekkieeiiLAIPSVDAGTKREI  227
            +  E + ++DD+ +K   +I +G+KV G  +DI ++    +I  II+AIP++     REI
Sbjct  165  MGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREI  224

Query  228  INICKNTKAKLKTLPGIYEIIDGKVSISKIRDVSIEDLLGREEVKLNNDDINKYIKDKVV  287
             ++C  T+  +  +P I +++ G + ++K++ V +EDLLGR+ V L+   I+K + +K +
Sbjct  225  NKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTI  284

Query  288  LVTGGGGSIGSELCRQITKFKPRKLLILDIYENNAYDLQMEL-NYSNPNLDKEViiasir  346
            LVTG+GGSIGSE+CRQ+ KF P ++++L+  EN+ Y+++ EL    + +++   IIA ++
Sbjct  285  LVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQ  344

Query  347  eeerlreifeKYKPEVVFHAAAHKHVPLMENNPAEAVKNNIIGTYNLVKCCHEYKVKKFV  406
            + ER++ + + YKP VV+HAAAHKHVPLME NP EA+KNN++GT N         V KFV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  407  QISTDKAVNPTNIMGATKRFCEIMIQAFDT-VSETEYVAVRFGNVLGSNGSVIPLFKKQI  465
             +STDKAVNP N+MGA+KR  E++IQ+ +   S T++VAVRFGNVLGS GSVIPLFKKQI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  466  AHGGPVTVTHPEINRYFMTIPEASQLVIQAGGMAKGGEIFVLDMGEPVKINDLARDLIRL  525
              GGPVTVTHP + RYFMTIPEAS+LV+QAG++A GGEIFVLDMG PVKI DLA++LIRL
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  526  SGYEPDIDIRIKYTGLRPGEKLYEELLMDEIALTNTEHDKIYVEK  570
            SGY  + DI I ++G+R+GEKL+EELL  +    +   +KIY  K
Sbjct  525  SGYKEE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

373) REMIM1_PA00003 in NC_021906


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  300 bits (1124),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 350/524 (67%), Gaps = 36/524 (6%)

Query  57   VMGMYRAIFRYANMAAFIAVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLL-----  111
            + ++Y+    YA+++ +I ++K+++   VA     T++ VP   +   +L+ +++     
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVA-----TGIIVPIFTQQAPFLRLYFITWMMH  115

Query  112  LIAIGLSRLGIRYWLGDTYQRIL--HQNTLAKVLIYGAGNAGRQLAGALTNSAELNVVGY  169
            L+ IG SRL+   W    Y++ +   +      LI G+G +G  L   + N++ + +   
Sbjct  116  LLLIGGSRLS---W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  170  L---DDDPRLKGGIMGGLPIYDP-SDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRK  225
            L   DD  + K +I +G+ + +   D+P L   + + ++++A+P+ S+QR  EI      
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  226  ARVNVRTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAG  285
            + V+V  +P++  +  G + V+ ++ +E+EDLLGR++V      + K + +K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  286  GSIGGELCRQILRNAPSSLILIDQNEFALYNIHAELLKLAEVYKHEGLQIVPILCSVRDQ  345
            GSIG+E+CRQ+ + +P  ++L+++ E ++Y+IH EL+ L   YK+E ++++PI+  V+D+
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL---YKEE-IEVIPIIADVQDK  346

Query  346  DRMEHIMESWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKYGVSNFVLI  405
            +RM  +M++ +P  +YHAAA KHVPL+E N+ E+IKNNV+GT  TA AA+   VS+FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  406  STDKAVRPTNVMGASKRLAEMVLQALAAELTADRLRTNFSMVRFGNVLGSSGSVVPLFRQ  465
            STDKAV P NVMGASKR+AEMV+Q++  E +    +T+F  VRFGNVLGS GSV+PLF++
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  466  QIKEGGPVTLTHPKITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMV  525
            QI  GGPVT+THP +TRYFMTI+EAS+LV+QAGA+A GG++F+LDMG PV+I DLA++++
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  526  ELSGLTVRDLDNPEGDIELAVTGLRPGEKLYEELLIGDNPETTE  569
             LSG         E DI +  +G+R+GEKL+EELL  D+ +  +
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

374) lpsB2 in NC_007763


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  300 bits (1125),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 350/524 (67%), Gaps = 36/524 (6%)

Query  57   VMGMYRAIFRYANMAAFIAVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLL-----  111
            + ++Y+    YA+++ +I ++K+++   VA     T++ VP   +   +L+ +++     
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVA-----TGIIVPIFTQQAPFLRLYFITWMMH  115

Query  112  LIAIGLSRLGIRYWLGDTYQRIL--HQNTLAKVLIYGAGNAGRQLAGALTNSAELNVVGY  169
            L+ IG SRL+   W    Y++ +   +      LI G+G +G  L   + N++ + +   
Sbjct  116  LLLIGGSRLS---W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV  170

Query  170  L---DDDPRLKGGIMGGLPIYDP-SDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRK  225
            L   DD  + K +I +G+ + +   D+P L   + + ++++A+P+ S+QR  EI      
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  226  ARVNVRTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAG  285
            + V+V  +P++  +  G + V+ ++ +E+EDLLGR++V      + K + +K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  286  GSIGGELCRQILRNAPSSLILIDQNEFALYNIHAELLKLAEVYKHEGLQIVPILCSVRDQ  345
            GSIG+E+CRQ+ + +P  ++L+++ E ++Y+IH EL+ L   YK+E ++++PI+  V+D+
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL---YKEE-IEVIPIIADVQDK  346

Query  346  DRMEHIMESWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKYGVSNFVLI  405
            +RM  +M++ +P  +YHAAA KHVPL+E N+ E+IKNNV+GT  TA AA+   VS+FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  406  STDKAVRPTNVMGASKRLAEMVLQALAAELTADRLRTNFSMVRFGNVLGSSGSVVPLFRQ  465
            STDKAV P NVMGASKR+AEMV+Q++  E +    +T+F  VRFGNVLGS GSV+PLF++
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  466  QIKEGGPVTLTHPKITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMV  525
            QI  GGPVT+THP +TRYFMTI+EAS+LV+QAGA+A GG++F+LDMG PV+I DLA++++
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  526  ELSGLTVRDVDNPEGDIELAVTGLRPGEKLYEELLIGDNPETTE  569
             LSG         E DI +  +G+R+GEKL+EELL  D+ +  +
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

375) wbfY in NC_004347


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1122),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 209/453 (47%), Positives = 323/453 (72%), Gaps = 22/453 (4%)

Query  121  LVFVGGAR----ALMRSLVGAGINRRGEPVIIYGAGVSGRQTAIALAQSHEY---HPVAF  173
            L+++GG+R       +++++   +++  P +I G+G +G      + ++  Y   +PV  
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLV  172

Query  174  VDDDESLHNTSI-QGLHVYAS-NQLSKLIKQRPTTRVLLAMPSASRSRRQEIINQLEPLT  231
            VDDD + ++ SI  G+ V +  ++++ L+K+    ++++A+P+ S+ R +EI +  E   
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  232  VKVMTLPAMADLVSGDKLFSDVKEVEIEDLLGRDSVAPRQHLLTANIKNKVVMVTGAGGS  291
            V V  +P + +++SG+   + +K VE+EDLLGRD+V      ++ ++ +K ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  292  IGSELCRQILKQLPKQLVLFELSEFALYSIERELSATATELGIDVEIVPIMGSVQRENRV  351
            IGSE+CRQ+ K  P +++L+  +E ++Y I++EL +   E   ++E++PI++ VQ  +R+
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERM  349

Query  352  QAVMQAFKVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTARAAIAAKVETFVLVSTD  411
            + VMQA+K   VYHAAA KHVPL+E N  E+++NNV+GT  TA AA  A V  FV+VSTD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  412  KAVRPTNVMGTTKRMAELALQALAKENHHTRFCMVRFGNVLGSSGSVVPLFRKQIANGGP  471
            KAV P NVMG++KR+AE+ +Q++ +E   T F  VRFGNVLGS GSV+PLF+KQI  GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  472  VTVTHPEITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKSVKIIDLAAKMIRLSGYDV  531
            VTVTHP +TR+FMTIPEAS+LV+QAGA++ GG++FVLDMGK+VKI+DLA ++IRLSGY  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY--  527

Query  532  KDEANPNGDIAIEFTGLRPGEKLYEELLIGDDV  564
            K+E     DI+IEF+G+R+GEKL+EELL  D++
Sbjct  528  KEE-----DIGIEFSGIRSGEKLFEELLNKDEI  555

376) Celal_3148 in NC_014934


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1122),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 233/556 (42%), Positives = 381/556 (69%), Gaps = 21/556 (3%)

Query  18   LVLIVDVILVSFSFVLAYFILFNLTMNFDIHKLFVQLPFVALISLVSFLIIGSYKGVVRH  77
            ++L++D I+V+FS  L+Y+IL  +   + I+ L++   ++ +   V   I++ Y      
Sbjct  12   MLLFIDSIIVTFSVFLGYYILEPFFKGYSINVLILSSLILLISHHVFAQIFDLYHRAWEY  71

Query  78   TGVRDVYNIFNAICLSSIITIVIVVANRAYNFFDGFTVPLTIIIIHSLLSFIALTASRYV  137
            ++V ++  I +++  SSI++  I+V+     +F   +  L + +I  ++ ++ + +SR  
Sbjct  72   ASVSELILIVKSVT-SSIVATGIIVP-----IFTQQAPFLRLYFITWMMHLLLIGGSRLS  125

Query  138  FKALYFNIVMNNYNSASKNVLIYGAGESGILTHSALTNASKSKVKVVGYIDKDQQKVGKH  197
             + +Y +  +++ ++  K  LI G+G +G L    + N++   +  V  +D D +K    
Sbjct  126  WR-IYRKTFISK-EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  198  I-NGVKVYHNDALTESFILKKDISEVIFSIQNIDHKKLRVLVESLVDYPVLVKI--VPAV  254
            I +GVKV         ++ K +I  +I++I  + +++LR  ++ L +    V +  +P +
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE-INKLCE-GTNVEVFKMPNI  241

Query  255  EDWINGELKLSQIKQVQIEDLLDRATIDIKNSNIAEELKNKTVLVTGGAGSIGSEIVRQV  314
            E+ ++GE+ ++++K+V++EDLL+R  +++  ++I+ EL +KT+LVTG++GSIGSEI RQV
Sbjct  242  ENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  315  CTYGYKSLIVIDQAESALYDLQQEL----KQNGFHNFIPIVADVRDKNRMNIVFQEYAPN  370
            C +    +++++++E+++Y+++QEL    K++   + IPI+ADV+DK+RM+ V Q Y P 
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEE--IEVIPIIADVQDKERMKKVMQAYKPY  359

Query  371  IVFHAAAYKHVPLMEYNSYEAIKINVAGTKVLCDLSAHYNVDKFVFVSTDKAVNPTNVMG  430
            +V+HAAA KHVPLMEYN+ EAIK NV GT+   + +   +V KFV VSTDKAVNP NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  431  ATKRIAEMYISCMQ-QLKKTKFITTRFGNVLGSNGSVIPLFKKQIEKGGPLTVTHEDVTR  489
            A+KR+AEM I  M+ +  KT F++ RFGNVLGS GSVIPLFKKQIE GGP+TVTH ++TR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  490  FFMTIPEASQLVLEAGAMGEGGEIFIFDMGESVKIFDLAKNMIKLSGLKYPEDIDIKVTG  549
            +FMTIPEAS+LVL+AGA++ GGEIF++DMG +VKI DLAKN+I+LSG K  EDI+I  +G
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSG  538

Query  550  LRPGEKLYEELLANGE  565
            +R+GEKL+EELL ++E
Sbjct  539  IRSGEKLFEELLNKDE  554

377) lpa_01458 in NC_014125


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1120),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKSF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

378) lp12_0988 in NC_016811


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1120),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKSF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

379) capD in NC_009494


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1120),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKSF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

380) lpg0966 in NC_002942


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1120),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKSF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

381) capD in NC_021350


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1120),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKSF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

382) mma_2254 in NC_009659


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1119),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 209/479 (44%), Positives = 332/479 (70%), Gaps = 21/479 (4%)

Query  97   LATFAHTAPLSRGVFGIYWVSAILYVVASRFLARGYLLRADDRGGSAVRVAIYGAGHSGM  156
            ++ F++ AP+ R ++ I W+  +L + +SR+  R Y      + G      I G+G++G 
Sbjct  95   VPIFTQQAPFLR-LYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGS  153

Query  157  QLASALRAGHEYL---PVALIDDKKELHGATIA-GVKVWPS-SELPRLVAEKQIKEVLLA  211
             L   +     Y+   PV ++DD  + +  +IA GVKV     ++P LV   +IK +++A
Sbjct  154  LLIRQMMNTP-YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIA  212

Query  212  MPSLRKAQQKL-ILEQL-EPLKVKIKVTPPIASLVNGELRVQDIRDIEIEDLLGRDAVEP  269
            +P+L  +QQ+L  +++L E  +V +   P I ++++GE+ V+ ++ +E+EDLLGRD+VE 
Sbjct  213  IPTL--SQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVEL  270

Query  270  DMRLLSTCITGRTVMVTGAGGSIGSELCRQIIRLAPKRLLLLDMSEFALYSIEQELQEVK  329
            DM  +S  +T +T++VTGAGGSIGSE+CRQ+ +++P R++LL+ +E ++Y I+QEL  + 
Sbjct  271  DMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLY  330

Query  330  RTQNVDVHVLPFLGSVLESEKCERILRTYSVDTIYHAAAYKHVPLVEHNPIQGIRNNALG  389
            +    +++V+P+++ V + E+  +++++Y    +YHAAA KHVPL+E NP ++I+NN LG
Sbjct  331  KE---EIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLG  387

Query  390  TLCLARAAVAAGVGCFVLISTDKAVRPTNVMGATKRLAELILQAFSRNQDGTRFCMVRFG  449
            T   A AA  A V+ FV++STDKAV P NVMGA+KR+AE+++Q+ + +   T F  VRFG
Sbjct  388  TRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFG  447

Query  450  NVLGSSGSVVPLFRKQIMSGGPITLTHPEITRYFMTIPEAAQLVLQAGAMGEGGDVFVLD  509
            NVLGS GSV+PLF+KQI +GGP+T+THP +TRYFMTIPEA++LVLQAGA++ GG++FVLD
Sbjct  448  NVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLD  507

Query  510  MGEPVKILDLATRMVHLSGFEVQGDSDSSDTIEIQHVGLRPGEKLYEELLIGSNVEGTQ  568
            MG PVKI+DLA  +++LSG+         + I I+  G+R+GEKL+EELL   +++  Q
Sbjct  508  MGKPVKIVDLAKNLIRLSGY-------KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

383) SELR_17400 in NC_017068


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1119),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 223/526 (43%), Positives = 347/526 (66%), Gaps = 38/526 (7%)

Query  71   LYHSLWRFASFSELLRIIYGNLATILLMAVGMNFFVGNMP-ISYYIMGAAIQFGLVLGVR  129
            LYH  W +AS SEL+ I+ +  ++I+  ++ + +F  + P +  Y++   +++ L+ G R
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  130  FAYRFILLLRVAQQDRRGEGSRVMLIGAGSAGQLIMRDIKRSVRTNEKVCCFIDDDPTKW  189
            ++ R   + R +   + G     +++G+G +G L++R++  +          +DDD+ K 
Sbjct  124  LSWR---IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  190  N-RLVDGVPIVGGRDEILASVEKYQIDKIYLTVPSASAAEKRDLLNICKETDCELKQLPG  248
            +  +  GV + G   +I   V K++I KI +++P+ S    R++ ++C  T+ E+ ++P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  249  LYQLVNGQLSVSAMKKVSVEDLLGREPVKADLSDVFQFIHGKRVLVTGGGGSIGSELARQ  308
            + ++++G++ V+ +KKV VEDLLGR+PV  D++ + + +  K +LVTG+GGSIGSE+ RQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  309  IAAHQPEQLILVDIYENNVYNVQLELRDRY-PELDLVVLIASVRDSRRMFQIFEEYRPQI  367
            +    P++++L++  EN++Y+++ EL + Y  E++++ +IA V+D  RM ++ + Y+P +
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  368  VYHAAAHKHVPLMEDSPCEAVKNNAIGTFKTAYAAMVHGCERFVLISTDKAVNPTNIMGA  427
            VYHAAAHKHVPLME +P EA+KNN +GT +TA AA +    +FV++STDKAVNP N+MGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  428  TKRLCEMIIQSFDAKIKAGKANEIPQLFTHEGLENADADGTGKIFENVKTEFVAVRFGNV  487
            +KR+ EM+IQS +                                E  KT+FVAVRFGNV
Sbjct  421  SKRVAEMVIQSMNN-------------------------------ETSKTDFVAVRFGNV  449

Query  488  LGSNGSVIPIFQKQIAAGHNLTVTHPDIIRYFMTIPEAVSLVMLAGTYAKGGEIFVLDMG  547
            LGS GSVIP+F+KQI AG  +TVTHP++ RYFMTIPEA  LV+ AG+ A GGEIFVLDMG
Sbjct  450  LGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMG  509

Query  548  SPVKIADLAKNLIRLSGLKLGVDIDIDYTGLRPGEKLFEEKLMAEE  593
             PVKI DLAKNLIRLSG K   DI+I+++G+R+GEKLFEE L  +E
Sbjct  510  KPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDE  554

384) LPO_1050 in NC_018139


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1119),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKSF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

385) LPV_1104 in NC_018140


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  299 bits (1119),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKNF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

386) wbpM in NC_015856


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  298 bits (1118),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 218/482 (46%), Positives = 336/482 (70%), Gaps = 24/482 (4%)

Query  97   IGTFTQTAGYSRAVFGIYWVSAILYVAASRFLARGYLLRVSGIVGVV-PVAIYGAGQAGT  155
            +  FTQ A + R  F I W+  +L +++SR+  R Y     +  G   P  I G+G++G+
Sbjct  95   VPIFTQQAPFLRLYF-ITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGS  153

Query  156  QLASALRAGNEYL---PVAFIDDKKELQKATIA-GIKVFD-AEDLPNLIARYKVKEILLA  210
             L   +     Y+   PV  +DD  + QK +IA G+KV +   D+P+L+ ++++K I++A
Sbjct  154  LLIRQMM-NTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIA  212

Query  211  MPSLSKLQQKHILDKL-EPLKVKIKVTPPIKSLINGELRVQDIREVEIEDLLGRDPVEPN  269
            +P+LS+ + ++I +KL E  +V +   P I ++++GE+ V+ ++ VE+EDLLGRDPVE +
Sbjct  213  IPTLSQQRLREI-NKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELD  271

Query  270  PELISACIVDKSVMVTGAGGSIGSELCRQIIRQRPSRLILLEMSEYGLYAIEQELSELQR  329
               IS  + +K+++VTGAGGSIGSE+CRQ+ +  P R++LL  +E ++Y I+QEL  L +
Sbjct  272  MASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK  331

Query  330  NIGFNIELLPFLGSVLETEKCARIMRTFSVETVYHAAAYKHVPLVEHNPIEGIRNNVFGT  389
            +   +IE++P+++ V + E+  ++M+++    VYHAAA KHVPL+E NP E+I+NNV+GT
Sbjct  332  E---EIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGT  388

Query  390  LSVAKAAMASGVKSFVLISTDKAVRPTNVMGSTKRFAELILQAFSRVQGKSPSKTRFCMV  449
             + A AA  + V  FV++STDKAV P NVMG++KR AE+++Q+ +    +  SKT F  V
Sbjct  389  RNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMN----NETSKTDFVAV  444

Query  450  RFGNVLGSSGSVVPLFRKQIMAGGPITLTHPEITRYFMTIPEAAQLVLQAGAMGQGGDVF  509
            RFGNVLGS GSV+PLF+KQI AGGP+T+THP +TRYFMTIPEA++LVLQAGA++ GG++F
Sbjct  445  RFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIF  504

Query  510  VLDMGEPVKIIDLAKRMVHLSGLEVLSDLTPDGTIEINHVGLRPGEKLYEELLIGENVEG  569
            VLDMG PVKI+DLAK +++LSG         +  I I+  G+R+GEKL+EELL  ++++ 
Sbjct  505  VLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

Query  570  TE  571
             +
Sbjct  558  EQ  559

387) Dtur_0573 in NC_011661


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  298 bits (1118),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 213/486 (44%), Positives = 337/486 (70%), Gaps = 13/486 (2%)

Query  71   LYRTLWEYFSLEALKELTLAITLEKIIFYLSYLIFPIQGLPRSIILISYFTS---LLLLF  127
            LY+  WEY    ++ EL L +      +  + +I PI    ++ +L  YF +    LLL+
Sbjct  64   LYHRAWEY---ASVSELILIVKSVTSSIVATGIIVPIFT-QQAPFLRLYFITWMMHLLLI  119

Query  128  SVRAFTRWVYESKKSIDKVNYAQKKRVVIIGAGDAGEKILREIKTHKNLNYDVVGFLDDD  187
            +   +++++Y  K  I K   ++KK  +I+G+G +G  ++R++     +  + V  +DDD
Sbjct  120  GGSRLSWRIY-RKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  188  PkkigktihgikilgP-ISSLHKVVRGNGVQEILVAIPSAPPSLLKNILSMASKLKLPVK  246
            ++K   +I +   +   I  +  +V+   ++ I++AIP+ +   L++I  +    ++ V 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  247  TLPGIWELIDGKVTISKIRDVKIEDLLERDVIDLDSEKIGEYLRGKKVLVTGAGGSIGAE  306
             +P I +++ G + ++K++ V +EDLL RD ++LD   I+  L  K +LVTGAGGSIG+E
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  307  ICRQVARYGPQKLILLGRGENSIFNIELELKNTY-PNLNICSYIADIKDRDRIFYIFSME  365
            ICRQV ++ P++++LLG+GENSI++I+ EL   Y  ++++ + IAD++D++R+  +    
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  366  KPEIVFHSAAHKHVPLMEENPDEAVFNNVFGTINVMDASKEYGVKKFIFISTDKAVYPAN  425
            KP +V+H+AAHKHVPLME NP+EA+ NNV+GT N  +A+K   V KF+ +STDKAV P+N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  426  IMGATKRVGEMLVRYYNSH-SQTEYIAVRFGNVLGSRGSVLEVFKKQIEMGGPITITHKD  484
            +MGA+KRV+EM+++  N++ S+T+++AVRFGNVLGSRGSV+ +FKKQIE GGP+T+TH +
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  485  MERYFMTIPEAVGLVLQAGAIGKSGDLFVLDMGKPVKIIDLAKNFIELSGYSVEDIEIKI  544
            M RYFMTIPEA  LVLQAGA++ +G++FVLDMGKPVKI+DLAKN+I LSGY  EDI I +
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEF  536

Query  545  IGLRPG  550
             G+R+G
Sbjct  537  SGIRSG  542

388) lpl0995 in NC_006369


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  298 bits (1118),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 218/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  69   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  123
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  124  ATILCGGRLVIRLHWDKPDRG--NRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  179
              +L GG    RL W    +   ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  180  FVDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  238
             VDD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  239  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  298
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  299  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKSF-PGIPVELSLISVTDEIAINH  357
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  358  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  417
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  418  VNPTNIMGTTKRVAEIYCQNLNARV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  476
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  477  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  535
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  536  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  583
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

389) LPE509_02241 in NC_020521


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  298 bits (1118),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 217/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  73   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  127
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  128  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  183
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  184  FIDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  242
             +DD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  243  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  302
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  303  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKNF-PGIPVELSLISVTDEIAINH  361
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  362  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  421
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  422  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  480
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  481  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  539
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  540  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  587
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

390) CV_4115 in NC_005085


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  298 bits (1117),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 209/474 (45%), Positives = 324/474 (69%), Gaps = 15/474 (3%)

Query  116  WVFAMAYIGGSRFLLRGLVRRIDATEAPRDPVIIYGAGQAGVQLMLALQAGREYRPMA--  173
            W+  +  IGGSR+  R   + + + E+ + P +I G+G++G  L++       Y  M   
Sbjct  112  WMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGG-SLLIRQMMNTPYMGMEPV  170

Query  174  -FVDDNPDLRRRTY-RGVAVHAP-EELPALIKDTQAKCILLAMPSVGRGRQREILESLEK  230
              VDD+++ ++ +   GV V++   ++P L+K  + K I++A+P++++ R REI    E 
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  231  LRVPIKRLPGMADLVSGEARVEELKEVEIEDLLGREPVPPKTELLARNIRDKVVMVTGAG  290
              V + ++P + +++SGE  V+ LK VE+EDLLGR+PV      +++++ +K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  291  GSIGSELARQIVRNRPARIVLFELSEFALYSIDQELAQI-APRIPRTPILGSVTDYARLT  349
            GSIGSE+ RQ+ +  P RI+L+  +E ++Y I+QEL  +    I   PI++ V D  R+ 
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMK  350

Query  350  QVMRAFQVETVYHAAAYKHVPMVEHNPVAGIVNNAFGTDTTARAAEDCGVDTFVLISTDK  409
            +VM+A++   VYHAAA KHVP++E NP  +I NN +GT  TA AA    V  FV++STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  410  AVRPTNVMGATKRLAELTLQTRHARGSRTRFVMVRFGNVLGSSGSVVPLFRRQIKAGGPI  469
            AV P NVMGA+KR+AE+ +Q+ +   S+T FV VRFGNVLGS GSV+PLF++QI AGGP+
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  470  TLTHADITRYFMTIPEAAQLVIQAGAMGDGGDVFVLDMGEPVKIIELARRMVHLSGLEVK  529
            T+TH+++TRYFMTIPEA++LV+QAGA++ GG++FVLDMG PVKI++LA+ +++LSG   K
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY--K  528

Query  530  DENQPGGDIEIRVTGLRPGEKLYEELLIGDNVLPTD-HARIMRAQEYHLTEEEM  582
            +E     DI I  +G+R+GEKL+EELL  D++ P +   +I R++   +  EE+
Sbjct  529  EE-----DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

391) lpp1028 in NC_006368


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  298 bits (1117),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 217/528 (42%), Positives = 359/528 (68%), Gaps = 25/528 (4%)

Query  69   FKIYRGLWRFSSLNDVIRILKATITAMV---LVIPVFYLTSILQHLPRSVFPLYCI--IL  123
            F +Y+  W ++S++++I I+K+  +++V   +++P+F      Q+ P   + LY I  ++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-----TQQAP--FLRLYFITWMM  114

Query  124  ATILCGGRLVIRLHWD--KPGRGNRELETKRVLVVGAGQAGEGLVRDLKRSSYY--RPIG  179
              +L GG    RL W   +    ++E   K  L+VG+G++G  L+R++  ++Y    P+ 
Sbjct  115  HLLLIGGS---RLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  180  FIDDNKSKRGLEV-HGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCEQS  238
             +DD+ +K+ + +  GV+V G  ++I ELV+++++  I+IAIP+     +R I  LCE +
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  239  HVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSiagrrilitgggg  298
            +V    +P+I  + +G +EVN L+ V++EDLLGRD V L+   I++ ++ + IL+TG+GG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  299  sigsELCRQVMALEPASIAIVENSEFNLYRIEQELLKNF-PGIPVELSLISVTDEIAINH  357
            SIGSE+CRQV  + P  I ++ ++E ++Y+I+QEL+  +   I V   +  V D   ++ 
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKK  351

Query  358  LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTDKA  417
            + + ++P +V+HAAA KHVP+++ + + A+ NNV+GT+  A A+      KF+++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  418  VNPTNIMGTTKRVAEIYCQNLNTRV-KTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT  476
            VNP N+MG++KRVAE+  Q++N    KT+F++VRFGNVLGS GSV+PLF+KQ++ GGP+T
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  477  VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAG-KEPG  535
            VTHP+M RYFMTIPEA +L+LQA   + GGEIFVLDMG PVKI  LA ++IRL+G KE  
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-  530

Query  536  RDIMIEYTGLRPGEKMYEELFHETEQLTSTKHEKLFKARFRELDWNDL  583
             DI IE++G+R+GEK++EEL++  E       EK+++++ + ++ ++L
Sbjct  531  -DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

392) FSU_0179 in NC_017448


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  297 bits (1112),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 219/455 (49%), Positives = 317/455 (70%), Gaps = 31/455 (6%)

Query  15   MFRNAFISIINTGHREAMKKRTMIIGAGNATKLLLDEIRNSAKDAEKGVATSNASKINPV  74
            ++R++FIS      +E+ KK T+I+G+G +  LL+ ++ N++  +           ++PV
Sbjct  128  IYRKTFIS------KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG-----------MEPV  170

Query  75   CLIDDDRYKIGKPFE-GVLVAGTTSDIPKIAKQENIEQILFSIPSCPPKDRQVIMDLCGK  133
             ++DDD  K   ++  GV V G   DIP + K+ NI +I+++IP+ + +  + I  LC  
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  134  TGLPVKVLPFVGTLLDTSNVGTGETNFATQIRDIKVEDLLGRDPIKFDNKDIRAYIENKV  193
            T + V  +P      +  NV +GE +   +++ + VEDLLGRDP+ +D   I   + +K 
Sbjct  231  TNVEVFKMP------NIENVMSGEIE-VNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  194  CMVTGGGGSIGSELVRQIAKYNPKQIIIVDIYENNAYDIQQELVMEYGKSLNLVTLIASV  253
             +VTG+GGSIGSE+ RQ+ K+ P +I++++  EN+ Y+I+QEL+  Y   ++++ +IA V
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADV  343

Query  254  RDYFRMNQIFKTYQPEVIFHAAAHKHVPLMENNPMEAIKNNVIGTFNVATLAMFNNVKKF  313
            +D  RM+++ ++Y+P V++HAAAHKHVPLME NP EAIKNNV+GT N A  A + +V KF
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  314  VMISTDKAVNPTNVMGASKRCCEMIVRFMSMQKESNTEFVVTRFGNVLGSNGSVIPLFKR  373
            VM+STDKAVNP NVMGASKR  EM+++ M+ +  S+T+FV  RFGNVLGS GSVIPLFK+
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMN-NETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  374  QIEQGKPVTVTHPEIIRYFMTIPEAVSLVLEAASIAQGGEIFVLDMGMPVKIVTLAENLI  433
            QIE G PVTVTHP + RYFMTIPEA  LVL+A+++A GGEIFVLDMG PVKIV LA NLI
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  434  RMYGKVPYK--DVPIKFTGLRPGEKIKEELLMNEE  466
            R+ G   YK  D+ I F+G+R+GEK+ EELL ++E
Sbjct  523  RLSG---YKEEDIGIEFSGIRSGEKLFEELLNKDE  554

393) Swoo_1680 in NC_010506


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  297 bits (1113),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 211/456 (47%), Positives = 321/456 (71%), Gaps = 20/456 (4%)

Query  121  LVLIGGSRGVIRAAVGSGMKREGE--PVIIYGAGVSGRQLVTALVQSHEYY----PFAFV  174
            L+LIGGSR   R    + + +EG   P +I G+G +G  L+  ++++   Y    P   V
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP--YMGMEPVLVV  173

Query  175  DDDVTTHG-SVIQGVHVHSP-SIVRKLIKQKQATKVLLAIPSASRQRRKEILLSLEPLAV  232
            DDD   +  S+  GV V++    +  L+K+ +  K+++AIP+ S+QR +EI    E   V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  233  QVLTLPAMADLVSGNKLYSDIKEVEIDDLLGRDAVSPREDLLKDNITDKVVMVTGAGGSI  292
            +V+ +P + +++SG+   + +K VE++DLLGRD+V      +  ++T+K ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  293  GSELCRQILKQRPSKLVLFELSEFGLYSIEKELSATAIENGLDVEIFPMLGSVQRENRVQ  352
            GSE+CRQ+ K  P +++L+  +E ++Y I++EL +   E   ++E++P+++ VQ  +R++
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMK  350

Query  353  AVMESFQVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTMYTARAAIAAKVETFVLISTDK  412
             VM++++   VYHAAA KHVPL+E N  E+++NNV+GT  TA AA  A V  FV++STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  413  AVRPTNVMGTTKRMAELSLQALAKESHATRFCMVRFGNVLGSSGSVVPLFRKQIASGGPV  472
            AV P NVMG++KR+AE+ +Q++ +E+  T F  VRFGNVLGS GSV+PLF+KQI +GGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  473  TVTHPEITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGESVKIVDLAAKMIRLSGFEVQ  532
            TVTHP +TR+FMTIPEAS+LV+QAGA++ GG++FVLDMG +VKIVDLA ++IRLSG+   
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK--  528

Query  533  DSINPDGDISIEFSGLRPGEKLYEELLIGDDVTGTE  568
                 + DI+IEFSG+R+GEKL+EELL  D++   +
Sbjct  529  -----EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

394) Desti_4692 in NC_018025


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  297 bits (1113),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 193/481 (41%), Positives = 313/481 (66%), Gaps = 12/481 (2%)

Query  128  LIDFFMSIVFIGGSRVGLRVLREKIRLILRTRSSGKETRAVIIGAGDAGEMIVREIARDT  187
            +I   M +++IGGSR++ R+ R  +         GK   ++I+G+G +G +++R++    
Sbjct  109  FITWMMHLLLIGGSRLSWRIYRKTF-----ISKEGKKKPTLIVGGGRGGSLLIRQMMNTP  163

Query  188  GSRIKIAAIFDDDPKKQGHTI-HGIRVVGGVDHISAYAQDNKFDTAMIAIPSARNADMRR  246
               +    + DDD++KQ  +I  G++V G + +I+   +  ++   +IAIP+  +  +R 
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  247  IHRILKTLDIKVKTLPGLNEIIHGSAKLTQLRDITISDLLGREEINIDTELLKKLIFRKT  306
            I+++    ++ V  +P +++++ G   + +L+ + + DLLGR+ +++D   + K + +KT
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  307  ALVTGAGGSIGSELCRQILKREPERLILLERTENSLFHVNRQLREVH-PDIPIVPVLCDV  365
             LVTGAGGSIGSE+CRQ+ K  P+R++LL + ENS++H++++L  +   +I ++P++ DV
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADV  343

Query  366  RDTVRVEEVFQEFRPELVFHAAAHKHVHMQELNPSECVKNNIAGMQTLARTCDRHGVSRF  425
            +D  R+  V Q ++P +V+HAAAHKHV + E NP E +KNN+ G +  A +     VS+F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  426  LLISTDKAVNPTSVMGATKRVCELYCQAFGM-VSDTKFLSVRFGNVLASEGSVVPIFMDQ  484
            +++STDKAVNP +VMGA+KRV E+  Q+     S T F++VRFGNVL+S GSV+P+F  Q
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  485  IARGGPITVTHPEMRRYFMTIPEAVTLVLQAAALGNSGEIMALQMGEPIKIMDLIQHLLM  544
            I  GGP+TVTHP M RYFMTIPEA  LVLQA+AL+ +GEI  L+MG P+KI+DL ++L+ 
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  545  LMGKEPDEIPIVFVGPRPGEKLFEELTAPSESNMATTHTNIKIF--NRDSVDPGKLIASI  602
            L G   ++I I F G R+GEKLFEEL    E +    +   KI+  + + ++   L   I
Sbjct  524  LSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIH--PEQVYEKIYRGKVQKIEKEELYNKI  581

Query  603  D  603
            D
Sbjct  582  D  582

395) YSA_02152 in NC_017986


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  297 bits (1113),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 216/532 (41%), Positives = 353/532 (67%), Gaps = 40/532 (7%)

Query  75   FGMYRAVMRYFGNDALVTIIKAVTLSSLILAVVVYWYSNHQVIVPRSIIFNYWWLSMVII  134
            F++Y+    Y +   L+ I+K+VT S +  +++V  ++++  ++   + F  W + +++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  135  GGLRLIMRQYFLGDWFTGAHQIPFANRDDGLVKVAIYGAGTAGNQLLAALRMGR--AMRP  192
            GG RL         W     +  F ++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRL--------SW--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  193  VAFIDDDSDLAN-RVISGLQVYKP-KHLPQMIKETGAQEILLALPSVSRARRKEILALLE  250
            V  +DDDS+  +  + SG++V    K++P+++K    + I++A+P++S+ R +EI  L E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  251  PYPLHVRSVPSFADLASGRVKVDDIQDVDIADLLGRDPVPAKEGLLERCIHKQTVLVTGA  310
               ++V  +P++ ++ SG + V+ ++ V++ DLLGRDPV    + + + +  +T+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  311  GGSIGSELCRQIIGLGPTTLLLFDHSEYNLYAILSELEQRVARESLSVRLLPILGSVRNQ  370
            GGSIGSE+CRQ+  + P  ++L++H+E ++Y I  EL   + +E + V  +PI++ V+++
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV--IPIIADVQDK  346

Query  371  QHLADVMSTWRVATVYHAAAYKHVPMVEHNMAEGILNNVFGTLCTAQAALQSGVANFVLI  430
            +++  VM + +   VYHAAA KHVP++E N  E+I NNV+GT  TA+AA  + V++FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  431  STDKAVRPTNVMGGTKRLSELILQALSREAAPVMYGDSSKIARVNNTRFTMVRFGNVLGS  490
            STDKAV P NVMG++KR++E+++Q+++ E++              +T F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  491  SGSVIPLFHKQIKAGGPITVTHPKITRYFMTIPEAAQLVVQAGAMGQGGDVFVLDMGEPV  550
             GSVIPLF KQI AGGP+TVTHP +TRYFMTIPEA++LV+QAGA++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  551  KIVELAEKMIHLSGLSVRSSGNPSGDIAIEFTGLRPGEKLFEELLIGDDVSP  602
            KIV+LA ++I+LSG           DI+IEF+G+R+GEKLFEELL  D++ P
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

396) Rpic12D_0577 in NC_012856


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1110),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 201/462 (44%), Positives = 324/462 (71%), Gaps = 16/462 (3%)

Query  113  LIYWLLAIFYIVCSRFFARAAFRM-LPGFHRQRQKVIIYGAGEAGRQLAVALRAGP--DY  169
            +I W++ ++ I  SR+ ++  +R  + + + +++  +I G+G +G  L   +   P  + 
Sbjct  109  FITWMMHLLLIGGSRL-SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  170  DPIGFVDDDPAKVKLNIG-GISVHQ-AEQLPALIKDLGVSQVLLAIPSASRGRRIEIVNA  227
            +P+  VDDD+ K K++I+ G+ V+    ++P L+K + + ++++AIP+ S+ R  EI + 
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  228  LEPLAVEVRVVPGMADLVSGEVHLADVREVEIDELLGREVVAPRRDLLRQSIAGKCVMVT  287
             E   VEV  +P + +++SGE+++  ++ VE+++LLGR+ V      + + ++ K ++VT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  288  GAGGSIGSELCRQIIKNEPVQVVLYEQSEFFLYSIEYELKQIIAAQGLAIELVPVLGSVL  347
            GAGGSIGSE+CRQ+ K  P +++L  ++E  +Y I+ EL  +   +   IE++P+++ V 
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQ  344

Query  348  NGDRLFSIMSKYNVQTIYHAAAYKHVPIVEFNMTEGILNNTVGTRVAAEAAMRANVESFV  407
            + +R+  +M  Y+   +YHAAA KHVP++E+N  E+I NN +GTR +AEAA  A+V  FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  408  LISTDKAVRPTNVMGASKRMAELCLQALAQDCANTRFSIVRFGNVLGSSGSVVPLFRKQI  467
            ++STDKAV P NVMGASKR+AE+ +Q++ ++ ++T F  VRFGNVLGS GSV+PLF+KQI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  468  AAGGPVTVTHQDITRYFMTIPEAAQLVIQAGAMGGEGEVFVLDMGQPVKIVDLARRMIHL  527
             AGGPVTVTH ++TRYFMTIPEA++LV+QAGA++  GE+FVLDMG+PVKIVDLA+ +I+L
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  528  SGFQVRDGANPAGDIEIQFTGLRPGEKLYEELLIGDAVSGTD  569
            SG++         DI I+F+G+R+GEKL+EELL  D +   +
Sbjct  525  SGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

397) G655_09090 in NC_020912


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1110),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 229/560 (41%), Positives = 360/560 (65%), Gaps = 41/560 (7%)

Query  26   FGMYRAVMRYLGNDALIAIAKAVTISALVLSLVVYWYRGAPAPVPRSLVFNYWWLSMLLI  85
            F++Y+    Y +   LI I K+VT S +  +++V  +    AP  R L F  W + +LLI
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-TQQAPFLR-LYFITWMMHLLLI  119

Query  86   GGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGR--AMRP  143
            GG RL+ R Y             F+++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  144  VAFIDDDKQIANRVIA-GLRVYTA-KHIRQMIDETGAQEVLLAIPSATRARRREILESLE  201
            V  +DDD +  +  IA G++V    K+I +++     + +++AIP+ ++ R REI    E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  202  PFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGA  261
               ++V  MP + ++ SG + V+ L+ V++ DLLGRD+V      + + +  + ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  262  GGSIGSELCRQIMSCSPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRNP  321
            GGSIGSE+CRQ+   +P  ++L+ H+E ++Y IHQEL    K E   ++++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  322  ERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLHavqaavqvgvqNFVLI  381
            ER+  VM++ K   VYHAAA KHVP++E N  E++ NNV+GT ++ +AA    V +FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  382  STDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGS  441
            STDKAV P NVMG++KR+AEMV+Q+++NE++              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  442  SGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPV  501
             GSVIPLF+ QI  GGPVTVTHP++TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  502  KILELAEKMIHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTD-HPMIM  560
            KI++LA ++I+LSG         + DI+IEFSG+R+GEKL+EELL  D+++P +    I 
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIY  565

Query  561  RANEEHLSWEAFKVVLEQLL  580
            R++ + +  E +   ++++L
Sbjct  566  RGKVQKIEKEELYNKIDDFL  585

398) wbpM in NC_017549


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1110),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 229/560 (41%), Positives = 360/560 (65%), Gaps = 41/560 (7%)

Query  26   FGMYRAVMRYLGNDALIAIAKAVTISALVLSLVVYWYRGAPAPVPRSLVFNYWWLSMLLI  85
            F++Y+    Y +   LI I K+VT S +  +++V  +    AP  R L F  W + +LLI
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-TQQAPFLR-LYFITWMMHLLLI  119

Query  86   GGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGR--AMRP  143
            GG RL+ R Y             F+++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  144  VAFIDDDKQIANRVIA-GLRVYTA-KHIRQMIDETGAQEVLLAIPSATRARRREILESLE  201
            V  +DDD +  +  IA G++V    K+I +++     + +++AIP+ ++ R REI    E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  202  PFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGA  261
               ++V  MP + ++ SG + V+ L+ V++ DLLGRD+V      + + +  + ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  262  GGSIGSELCRQIMSCSPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRNP  321
            GGSIGSE+CRQ+   +P  ++L+ H+E ++Y IHQEL    K E   ++++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  322  ERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLHavqaavqvgvqNFVLI  381
            ER+  VM++ K   VYHAAA KHVP++E N  E++ NNV+GT ++ +AA    V +FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  382  STDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGS  441
            STDKAV P NVMG++KR+AEMV+Q+++NE++              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  442  SGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPV  501
             GSVIPLF+ QI  GGPVTVTHP++TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  502  KILELAEKMIHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTD-HPMIM  560
            KI++LA ++I+LSG         + DI+IEFSG+R+GEKL+EELL  D+++P +    I 
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIY  565

Query  561  RANEEHLSWEAFKVVLEQLL  580
            R++ + +  E +   ++++L
Sbjct  566  RGKVQKIEKEELYNKIDDFL  585

399) SYN_02689 in NC_007759


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1108),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 209/474 (45%), Positives = 321/474 (68%), Gaps = 17/474 (3%)

Query  126  RIIFVDGLISLILIVGLRVSKRLY-LEILSRKGRTPEGKTTLIVGAGSCGEMILRDMMRQ  184
            R+ F+  ++ L+LI G R+S R+Y   ++S+ G+    K TLIVG+G  G +++R+MM  
Sbjct  106  RLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKK---KPTLIVGGGRGGSLLIRQMMNT  162

Query  185  RFADFRPVGFLDDSPDLQGRYI-HGVRVLGGTDRLTELIARHSVEAVIIAITSVNHKKLL  243
             + +  PV  +DD ++ Q   I  GV+V G    + EL+ + ++  +IIAI ++++++L 
Sbjct  163  PYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLR  222

Query  244  NLYETARKAGVKTIKVVPRFYSFDQPEINLKALEDIRIEDLLGRQAVTVDFGEIGRFLRG  303
            ++      + V  +K+ P + +    EI+++ L  + +EDLLGR++V +D + I++ L  
Sbjct  223  EINKLCEGTNVEVFKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTH  281

Query  304  RAVLVTGAGGSIGSEIVRQVCSFHPEKIILFDIDETELHNLGLTLNRLFPSLQKAISFVT  363
            +++LVTGAGGSIGSEI RQVC F P++I+L++ +E  + ++   L  L+      I++++
Sbjct  282  KTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIA  341

Query  364  GDVRDALRLREVFAELRPEVVFHAAAYKHVPMMEYNPKEAVKVNIFGTWNLVRAAVEHGV  423
             DV+D  R++ V    +P VV+HAAA KHVP+MEYNP+EA+K N++GT+N   AA    V
Sbjct  342  -DVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEV  400

Query  424  KKFVMISTDKAVRPTSVMGATKRMAEYLCRACDGMGDGPAR--FVSVRFGNVLGSRGSVL  481
             KFVM+STDKAV P +VMGA+KR+AE      ++M +  ++  FV+VRFGNVLGSRGSV+
Sbjct  401  SKFVMVSTDKAVNPPNVMGASKRVAE---MVIQSMNNETSKTDFVAVRFGNVLGSRGSVI  457

Query  482  PLFLEQLKHGQPLTVTHREMKRYFMTIPEAVTLVLQAAVIGNGGEVLVLDMGEPVKISDL  541
            PLF  Q+  G P+TVTH  M RYFMTIPEA  LVLQA+ ++ GGE++VLDMG PVKI DL
Sbjct  458  PLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDL  517

Query  542  AEELIRINGLEPYR--DVDIEVTGLRPGEKLFEEILTAEEGTDASRHEKIFVAR  593
            A +LIR++G   Y+  D++IE +G+R+GEKLFEE+L  +E       EKI+ ++
Sbjct  518  AKNLIRLSG---YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

400) Sden_2645 in NC_007954


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1108),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 218/514 (43%), Positives = 346/514 (68%), Gaps = 29/514 (5%)

Query  73   FGLYRAVLRYMGLQALTAILLGVIISTIAL-VLIAYYTDAQLPRTVPIIYAA--FALVFV  129
            F+LY+    Y ++  L  I+ +V  S +A  ++++ +T  Q +  + + + +    L+++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPFLRLYFITWMMHLLLI  119

Query  130  GGTRAM----VRSLVGSGMKRNGEPVIIYGAGVSGRQLVMALVQSHEYY----PFAFVDD  181
            GG+R       +++++   K++  P +I G+G +G  L+  ++++   Y    P   VDD
Sbjct  120  GGSRLSWRIYRKTFISKEGKKK--PTLIVGGGRGGSLLIRQMMNTP--YMGMEPVLVVDD  175

Query  182  DEAVQG-SVIQGVHVHSP-SIIKKLIKQKAATKVLLAIPSASRSRRQEILLQLEPLSVQV  239
            D   Q  S+  GV V++    I  L+K+    K+++AIP+ S+ R +EI    E  +V+V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  240  LTLPAMADLVSGNKLYSDIKEVEIDDLLGRDSVTPRQDLLTANIKDKVVMVTGAGGSIGS  299
            + +P + +++SG+   + +K VE++DLLGRD+V      ++ ++ +K ++VTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  300  ELCRQILKQAPKKLVLFELSEFALYAIESELTATAIELGLTVRILPMMGSVQKENRVQAV  359
            E+CRQ+ K +P +++L+  +E ++Y I+ EL +   E    + ++P+++ VQ  +R++ V
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMKKV  352

Query  360  MEAFGVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTARAAIKAKVETFVLVSTDKAV  419
            M+A+    VYHAAA KHVPL+E N  E+++NNV+GT  TA AA  A V  FV+VSTDKAV
Sbjct  353  MQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  420  RPTNVMGTTKRMAELVLQAFAKEKHSTRFCMVRFGNVLGSSGSVVPLFRKQIANGGPVTV  479
             P NVMG++KR+AE+V+Q+  +E   T F  VRFGNVLGS GSV+PLF+KQI  GGPVTV
Sbjct  413  NPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  480  THPEITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKSVKIVDLATKMIRLSGFEVKNE  539
            THP +TR+FMTIPEAS+LV+QAGA++ GG++FVLDMGK+VKIVDLA ++IRLSG+     
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK----  528

Query  540  LNPDGDVAIEFTGLRPGEKLYEELLIGDDVTGTE  573
               + D++IEF+G+R+GEKL+EELL  D++   +
Sbjct  529  ---EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

401) wbpM in NC_011770


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1109),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 225/560 (41%), Positives = 360/560 (65%), Gaps = 41/560 (7%)

Query  71   FGMYRAVMRYLGNDALIAIAKAVTISALVLSLLVYWYRSPPAVVPRSLVFNYWWLSMLLI  130
            F++Y+    Y +   LI I K+VT S +  +++V  +   ++ +   L F  W + +LLI
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  131  GGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGR--AMRP  188
            GG RL+        W   +    F+++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRLS--------W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  189  VAFIDDDKQIANRVIA-GLRVYTA-KHIRQMIDETGAQEVLLAIPSATRARRREILESLE  246
            V  +DDD +  +  IA G++V    K+I +++     + +++AIP+ ++ R REI    E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  247  PFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGA  306
               ++V  MP + ++ SG + V+ L+ V++ DLLGRD+V      + + +  + ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  307  GGSIGSELCRQIMSCSPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRNP  366
            GGSIGSE+CRQ+   +P  ++L+ H+E ++Y IHQEL    K E   ++++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  367  ERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLHavqaavqvgvqNFVLI  426
            ER+  VM++ K   VYHAAA KHVP++E N  E++ NNV+GT ++ +AA    V +FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  427  STDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGS  486
            STDKAV P NVMG++KR+AEMV+Q+++NE++              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  487  SGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPV  546
             GSVIPLF+ QI  GGPVTVTHP++TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  547  KILELAEKMIHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTD-HPMIM  605
            KI++LA ++I+LSG         + DI+IEFSG+R+GEKL+EELL  D+++P +    I 
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIY  565

Query  606  RANEEHLSWEAFKVVLEQLL  625
            R++ + +  E +   ++++L
Sbjct  566  RGKVQKIEKEELYNKIDDFL  585

402) wbpM in NC_017548


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1109),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 225/560 (41%), Positives = 360/560 (65%), Gaps = 41/560 (7%)

Query  60   FGMYRAVMRYLGNDALIAIAKAVTISALVLSLLVYWYRSPPAVVPRSLVFNYWWLSMLLI  119
            F++Y+    Y +   LI I K+VT S +  +++V  +   ++ +   L F  W + +LLI
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  120  GGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGR--AMRP  177
            GG RL+        W   +    F+++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRLS--------W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  178  VAFIDDDKQIANRVIA-GLRVYTA-KHIRQMIDETGAQEVLLAIPSATRARRREILESLE  235
            V  +DDD +  +  IA G++V    K+I +++     + +++AIP+ ++ R REI    E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  236  PFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGA  295
               ++V  MP + ++ SG + V+ L+ V++ DLLGRD+V      + + +  + ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  296  GGSIGSELCRQIMSCSPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRNP  355
            GGSIGSE+CRQ+   +P  ++L+ H+E ++Y IHQEL    K E   ++++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  356  ERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLHavqaavqvgvqNFVLI  415
            ER+  VM++ K   VYHAAA KHVP++E N  E++ NNV+GT ++ +AA    V +FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  416  STDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGS  475
            STDKAV P NVMG++KR+AEMV+Q+++NE++              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  476  SGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPV  535
             GSVIPLF+ QI  GGPVTVTHP++TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  536  KILELAEKMIHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTD-HPMIM  594
            KI++LA ++I+LSG         + DI+IEFSG+R+GEKL+EELL  D+++P +    I 
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIY  565

Query  595  RANEEHLSWEAFKVVLEQLL  614
            R++ + +  E +   ++++L
Sbjct  566  RGKVQKIEKEELYNKIDDFL  585

403) PPS_1447 in NC_015733


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1110),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 216/532 (41%), Positives = 352/532 (67%), Gaps = 40/532 (7%)

Query  67   FGMYRAVMRYFGNDALVTIIKAVTLSSLILAVVVYWYSNHQVIVPRSIIFNYWWLSMVII  126
            F++Y+    Y +   L+ I+K+VT S +  +++V  ++++  ++   + F  W + +++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  127  GGLRLIMRQYFLGDWFTGAHQIPFANRDDGLVKVAIYGAGTAGNQLLAALRMGR--AMRP  184
            GG RL         W     +  F ++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRL--------SW--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  185  VAFIDDDSDLAN-RVISGLQVYKP-KHLPQMIKETGAQEILLALPSVSRARRKEILALLE  242
            V  +DDDS+  +  + SG++V    K++P+++K    + I++A+P++S+ R +EI  L E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  243  PYPLHVRSVPAFADLASGRVKVDDIQDVDIADLLGRDPVPAKEGLLERCIHKQTVLVTGA  302
               ++V  +P + ++ SG + V+ ++ V++ DLLGRDPV    + + + +  +T+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  303  GGSIGSELCRQIIGLGPTTLLLFDHSEYNLYAILSELEQRVARESLSVRLLPILGSVRNQ  362
            GGSIGSE+CRQ+  + P  ++L++H+E ++Y I  EL   + +E + V  +PI++ V+++
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV--IPIIADVQDK  346

Query  363  QHLADVMSTWRVATVYHAAAYKHVPMVEHNMAEGILNNVFGTLCTAQAALQSGVANFVLI  422
            +++  VM + +   VYHAAA KHVP++E N  E+I NNV+GT  TA+AA  + V++FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  423  STDKAVRPTNVMGGTKRLSELILQALSREAAPVMYGDSSKIARVNNTRFTMVRFGNVLGS  482
            STDKAV P NVMG++KR++E+++Q+++ E++              +T F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  483  SGSVIPLFHKQIKAGGPITVTHPKITRYFMTIPEAAQLVVQAGAMGQGGDVFVLDMGEPV  542
             GSVIPLF KQI AGGP+TVTHP +TRYFMTIPEA++LV+QAGA++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  543  KIVELAEKMIHLSGLSVRSSGNPSGDIAIEFTGLRPGEKLFEELLIGDDVSP  594
            KIV+LA ++I+LSG           DI+IEF+G+R+GEKLFEELL  D++ P
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

404) Solca_0327 in NC_017770


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1107),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 221/504 (44%), Positives = 340/504 (68%), Gaps = 17/504 (3%)

Query  108  NAVLLGVVKLGLSNIESIIILPLNVILKYFLILFFFSTSYRFLI----KLGFESIRR---  160
            + ++L V  +  S + + II+P+      FL L+F++   ++L+    +L+    R+   
Sbjct  75   SELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFI  134

Query  161  -ENTLKKSILIFGAGESGMITKHVINHEAQCGLKVIGFLDDNLNKVGKYI-DGIKIYNAR  218
              +  KK+ LI G+G +G +  + + + +  G+  +  +DD+ NK    I  G+K+    
Sbjct  135  SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCI  194

Query  219  TDIQFLVDKYKVEEVIISIQNLDINRKRELVDICLLHEIKVVTIPRASNWIDGSFNLNQL  278
             DI  LV K+++  +II+I  L  +R RE+  +C   ++ V  +P   N + G +++N+L
Sbjct  195  KDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKL  254

Query  279  RNIKIEELLEREVITIQNAKVTDELRNKRILVTGAAGSIGSEVVRQVLKFNPELLVLCDQ  338
            +++ +E+LL R+ + ++ A ++ EL +K ILVTGA+GSIGSE+ RQV KF P+ ++L ++
Sbjct  255  KKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGH  314

Query  339  AETALYNIELEFKESFPNAC-IQPFIADIRNKERMEYLFDKYKPEIVFHAAAYKHVPMME  397
            +E ++Y+I+ E+   + +   + P+IAD+++KERM  + + YKP +V+HAAA KHVP+ME
Sbjct  315  GENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLME  374

Query  398  HHPSEAILTNVGGTKNVADLSVKYQVEKFVMISTDKAVNPTNVMGASKRIAEIYTQSLND  457
             +P EAI  NV GT+N A+ +   +V KFVM+STDKAVNP NVMGASKR+AE+  QS+N+
Sbjct  375  YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNN  434

Query  458  YYVQNGIESSTRFITTRFGNVLGSNGSVIPRFKEQIEKGGPITVTHPDINRYFMTIPEAC  517
                    S T F++ RFGNVLGS GSVIP FK QIE GGP+TVTHP++ RYFMTIPEA 
Sbjct  435  ------ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEAS  488

Query  518  QLVIEAGTMGNGGEIFVFDMGKSVKIVDLAKKMIQLSGLTPDKDIQIVFTGLRPGEKLYE  577
            +LV++AG+++ GGEIFV+DMGK+VKIVDLAK++I+LSG   + DI I F+G+R+GEKL+E
Sbjct  489  RLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFE  547

Query  578  ELLNDSECVQKTHHEKIKIARVRK  601
            ELLN  E       EKI  ++V+K
Sbjct  548  ELLNKDEIHPEQVYEKIYRGKVQK  571

405) PSPA7_1986 in NC_009656


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1107),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 228/567 (41%), Positives = 361/567 (64%), Gaps = 41/567 (7%)

Query  76   FGMYRAVMRYLGNDALIAIAKAVTISALVLSLVVYWYRGAPAPVPRSLVFNYWWLSMLLI  135
            F++Y+    Y +   LI I K+VT S +  +++V  +    AP  R L F  W + +LLI
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIF-TQQAPFLR-LYFITWMMHLLLI  119

Query  136  GGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGR--AMRP  193
            GG RL+        W   +    F+++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRLS--------W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  194  VAFIDDDKQIANRVIA-GLRVYTA-KHIRQMIDETGAQEVLLAIPSATRARRREILESLE  251
            V  +DDD +  +  IA G++V    K+I +++     + +++AIP+ ++ R REI    E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  252  PFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGA  311
               ++V  MP + ++ SG + V+ L+ V++ DLLGRD+V      + + +  + ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  312  GGSIGSELCRQILSCSPSVLILFEHSEYNLYSIHQELERRVKRESLSVNLLPILGSVRNP  371
            GGSIGSE+CRQ+   +P  ++L+ H+E ++Y IHQEL    K E   ++++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  372  ERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVMGTLHavqaavqvgvqHFVLI  431
            ER+  VM++ K   VYHAAA KHVP++E N  E++ NNV+GT ++ +AA    V  FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  432  STDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDQKGVHQVNKTRFTMVRFGNVLGS  491
            STDKAV P NVMG++KR+AEMV+Q+++NE++              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  492  SGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPV  551
             GSVIPLF+ QI  GGPVTVTHP++TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  552  KILELAEKMVHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTD-HPMIM  610
            KI++LA ++++LSG         + DI+IEFSG+R+GEKL+EELL  D+++P +    I 
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIY  565

Query  611  RANEEHLSWEAFKGVLEQLLTAVGTDD  637
            R++ + +  E +   ++++L   +  D
Sbjct  566  RGKVQKIEKEELYNKIDDFLINESVRD  592

406) cap1D in NC_018220


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  296 bits (1108),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 216/532 (41%), Positives = 352/532 (67%), Gaps = 40/532 (7%)

Query  75   FGMYRAVMRYFGNDALVTIIKAVTLSSLILAVVVYWYSNHQVIVPRSIIFNYWWLSMVII  134
            F++Y+    Y +   L+ I+K+VT S +  +++V  ++++  ++   + F  W + +++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  135  GGLRLIMRQYFLGDWFTGAHQIPFANRDDGLVKVAIYGAGTAGNQLLAALRMGR--AMRP  192
            GG RL         W     +  F ++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRL--------SW--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  193  VAFIDDDSDLAN-RVISGLQVYKP-KHLQQMIKETGAQEILLALPSVSRARRKEILALLE  250
            V  +DDDS+  +  + SG++V    K++ +++K    + I++A+P++S+ R +EI  L E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  251  PYPLHVRSVPAFADLASGRVKVDDIQDVDIADLLGRDPVPAKEGLLERCIHKQTVLVTGA  310
               ++V  +P + ++ SG + V+ ++ V++ DLLGRDPV    + + + +  +T+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  311  GGSIGSELCRQIIGLGPTTLLLFDHSEYNLYAILSELEQRVARESLPVRLLPILGSVRNQ  370
            GGSIGSE+CRQ+  + P  ++L++H+E ++Y I  EL   + +E + V  +PI++ V+++
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV--IPIIADVQDK  346

Query  371  QHLAHVMSTWRVATVYHAAAYKHVPMVEHNMAEGILNNVFGTLCTAQAALQSGVANFVLI  430
            +++  VM + +   VYHAAA KHVP++E N  E+I NNV+GT  TA+AA  + V++FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  431  STDKAVRPTNVMGGTKRLSELILQALSREAAPVMYGDSSKIARVNKTRFTMVRFGNVLGS  490
            STDKAV P NVMG++KR++E+++Q+++ E++              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  491  SGSVIPLFHKQIKAGGPITVTHPKITRYFMTIPEAAQLVVQAGAMGQGGDVFVLDMGEPV  550
             GSVIPLF KQI AGGP+TVTHP +TRYFMTIPEA++LV+QAGA++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  551  KIVELAEKMIHLSGLSVRSSGNPNGDIAIEFTGLRPGEKLFEELLIGDDVSP  602
            KIV+LA ++I+LSG         + DI+IEF+G+R+GEKLFEELL  D++ P
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

407) SVI_1496 in NC_014012


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  295 bits (1106),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 214/452 (48%), Positives = 317/452 (71%), Gaps = 20/452 (4%)

Query  118  LVLIGGSRGIIRAVVGSGMKKEGE--PVIIYGAGVSGRQLVTALMQSHEYY----PFAFV  171
            L+LIGGSR   R    + + KEG   P +I G+G +G  L+  +M++   Y    P   V
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP--YMGMEPVLVV  173

Query  172  DDDDSTHG-SVIQGVHVHSP-SIIRKLIKQKQATKVLLAIPSASRLRRKEILLSLEPLAV  229
            DDD + +  S+  GV V++    I  L+K+ +  K+++AIP+ S+ R +EI    E   V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  230  QVLTLPAMADLVSGNKLYSDIKEVEIDDLLGRDAVAPRQDLLADNIFDKVVMVTGAGGSI  289
            +V+ +P + +++SG+   + +K VE++DLLGRD+V      ++ ++ +K ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  290  GSELCRQILKQKPKKLVLFELSEFGLYSIEKELSASAKESGLEVEILPMLGSVQRENRVF  349
            GSE+CRQ+ K  P +++L+  +E ++Y I++EL +  KE   E+E++P+++ VQ  +R+ 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMK  350

Query  350  AVMDSFKVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTMYTARAAIAAKVETFVLISTDK  409
             VM+++K   VYHAAA KHVPL+E N  E+++NNV+GT  TA AA  A V  FV++STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  410  AVRPTNVMGTTKRMAELSLQALSKENHSTRFCMVRFGNVLGSSGSVVPLFRKQIAAGGPV  469
            AV P NVMG++KR+AE+ +Q++++E   T F  VRFGNVLGS GSV+PLF+KQI AGGPV
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  470  TVTHPEITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGESVKIVDLASKMIRLSGFEVR  529
            TVTHP +TR+FMTIPEAS+LV+QAGA++ GG++FVLDMG +VKIVDLA ++IRLSG+   
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK--  528

Query  530  DSINPAGDIEIVFTGLRPGEKLYEELLIGDDV  561
                   DI I F+G+R+GEKL+EELL  D++
Sbjct  529  -----EEDIGIEFSGIRSGEKLFEELLNKDEI  555

408) wbpM in NC_002947


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  295 bits (1106),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 216/532 (41%), Positives = 352/532 (67%), Gaps = 40/532 (7%)

Query  94   FGMYRAVMRYFGNDALVTIIKAVTLSSLILAVVVYWYSNHQVIVPRSIIFNYWWLSMVII  153
            F++Y+    Y +   L+ I+K+VT S +  +++V  ++++  ++   + F  W + +++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  154  GGLRLIMRQYFLGDWFTGAHQIPFANRDDGLVKVAIYGAGTAGNQLLAALRMGR--AMRP  211
            GG RL         W     +  F ++++      I G+G +G+ L+  +      +M P
Sbjct  120  GGSRL--------SW--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  212  VAFIDDDSDLAN-RVISGLQVYKP-KHLQQMIKETGAQEILLALPSVSRARRKEILALLE  269
            V  +DDDS+  +  + SG++V    K++ +++K    + I++A+P++S+ R +EI  L E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  270  PYPLHVRSVPAFADLASGRVKVDDIQDVDIADLLGRDPVPAKEGLLERCIHKQTVLVTGA  329
               ++V  +P + ++ SG + V+ ++ V++ DLLGRDPV    + + + +  +T+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  330  GGSIGSELCRQIIGLGPTTLLLFDHSEYNLYAILSELEQRVARESLPVRLLPILGSVRNQ  389
            GGSIGSE+CRQ+  + P  ++L++H+E ++Y I  EL   + +E + V  +PI++ V+++
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV--IPIIADVQDK  346

Query  390  QHLAHVMSTWRVATVYHAAAYKHVPMVEHNMAEGILNNVFGTLCTAQAALQSGVANFVLI  449
            +++  VM + +   VYHAAA KHVP++E N  E+I NNV+GT  TA+AA  + V++FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  450  STDKAVRPTNVMGGTKRLSELILQALSREAAPVMYGDSSKIARVNKTRFTMVRFGNVLGS  509
            STDKAV P NVMG++KR++E+++Q+++ E++              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  510  SGSVIPLFHKQIKAGGPITVTHPKITRYFMTIPEAAQLVVQAGAMGQGGDVFVLDMGEPV  569
             GSVIPLF KQI AGGP+TVTHP +TRYFMTIPEA++LV+QAGA++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  570  KIVELAEKMIHLSGLSVRSSGNPNGDIAIEFTGLRPGEKLFEELLIGDDVSP  621
            KIV+LA ++I+LSG         + DI+IEF+G+R+GEKLFEELL  D++ P
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

409) Sbal117_3014 in NC_017579


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  295 bits (1105),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 216/523 (42%), Positives = 356/523 (69%), Gaps = 38/523 (7%)

Query  64   VFAKL-GLYRAVLRYMGLQALTAIIVGVLASTVSL-VLIAYYSEANLPRTVPIIYAAF--  119
            VFA++ +LY+    Y ++  L  I+ +V +S V+  ++++ +++   +  + + + +   
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQ--APFLRLYFITWMM  114

Query  120  ALVFVGGTR----AMVRSLVGSGLKRVGEPVIIYGAGVSGRQLVTSLVQSHEYY----PF  171
             L+++GG+R       +++++   K+   P +I G+G +G  L+  ++++   Y    P 
Sbjct  115  HLLLIGGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTP--YMGMEPV  170

Query  172  AFVDDDVTLHG-TVIQGVHVHS-PSIIKKLITQKAATKVLLAMPSASRSRRQEILVKL-E  228
              VDDD   +  ++  GV V++    I  L+ +    K+++A+P+ S+ R +EI  KL E
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREI-NKLCE  229

Query  229  PLAVQVLTLPAMADLVSGNKLYSDIKEVEIDDLLGRDAVTPRCDLMVANIRNKVVMVTGA  288
               V+V+ +P + +++SG+   + +K VE++DLLGRD+V      +  ++ +K ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  289  GGSIGSELCRQILKQSPKKLVLFELSEFALYTIDRELSATAFELGL---DVKILPIMGSV  345
            GGSIGSE+CRQ+ K +P +++L+  +E ++Y I++EL      +GL   ++ ++PI++ V
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL------IGLYKEEIEVIPIIADV  343

Query  346  QRENRVQAVMQSFRVQTVYHAAAYKHVPLVEHNVVEGVRNNIFGTLYTARAAIAAKVETF  405
            Q  +R++ VMQ+++   VYHAAA KHVPL+E N  E+++NN++GT  TA AA  A V  F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  406  VLISTDKAVRPTNIMGTTKRMAELALQALSKETHQTRFSMVRFGNVLGSSGSVVPLFRKQ  465
            V++STDKAV P N+MG++KR+AE+ +Q++++ET +T F  VRFGNVLGS GSV+PLF+KQ
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  466  IANGGPVTVTHRDITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKAVKIVDLAAKMIR  525
            I  GGPVTVTH ++TR+FMTIPEAS+LV+QAGA++ GG++FVLDMGK+VKIVDLA ++IR
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  526  LSGFEVKDELNPDGDIAIEFSGLRPGEKLYEELLIGDDVTGTE  568
            LSG+        + DI+IEFSG+R+GEKL+EELL  D++   +
Sbjct  524  LSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

410) Sbal_2876 in NC_009052


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  295 bits (1105),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 216/523 (42%), Positives = 356/523 (69%), Gaps = 38/523 (7%)

Query  64   VFAKL-GLYRAVLRYMGLQALTAIIVGVLASTVSL-VLIAYYSEANLPRTVPIIYAAF--  119
            VFA++ +LY+    Y ++  L  I+ +V +S V+  ++++ +++   +  + + + +   
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQ--APFLRLYFITWMM  114

Query  120  ALVFVGGTR----AMVRSLVGSGLKRVGEPVIIYGAGVSGRQLVTSLVQSHEYY----PF  171
             L+++GG+R       +++++   K+   P +I G+G +G  L+  ++++   Y    P 
Sbjct  115  HLLLIGGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTP--YMGMEPV  170

Query  172  AFVDDDVTLHG-TVIQGVHVHS-PSIIKKLITQKAATKVLLAMPSASRSRRQEILVKL-E  228
              VDDD   +  ++  GV V++    I  L+ +    K+++A+P+ S+ R +EI  KL E
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREI-NKLCE  229

Query  229  PLAVQVLTLPAMADLVSGNKLYSDIKEVEIDDLLGRDAVTPRCDLMVANIRNKVVMVTGA  288
               V+V+ +P + +++SG+   + +K VE++DLLGRD+V      +  ++ +K ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  289  GGSIGSELCRQILKQSPKKLVLFELSEFALYTIDRELSATAFELGL---DVKILPIMGSV  345
            GGSIGSE+CRQ+ K +P +++L+  +E ++Y I++EL      +GL   ++ ++PI++ V
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL------IGLYKEEIEVIPIIADV  343

Query  346  QRENRVQAVMQSFRVQTVYHAAAYKHVPLVEHNVVEGVRNNIFGTLYTARAAIAAKVETF  405
            Q  +R++ VMQ+++   VYHAAA KHVPL+E N  E+++NN++GT  TA AA  A V  F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  406  VLISTDKAVRPTNIMGTTKRMAELALQALSKETHQTRFSMVRFGNVLGSSGSVVPLFRKQ  465
            V++STDKAV P N+MG++KR+AE+ +Q++++ET +T F  VRFGNVLGS GSV+PLF+KQ
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  466  IANGGPVTVTHRDITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKAVKIVDLAAKMIR  525
            I  GGPVTVTH ++TR+FMTIPEAS+LV+QAGA++ GG++FVLDMGK+VKIVDLA ++IR
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  526  LSGFEVKDELNPDGDIAIEFSGLRPGEKLYEELLIGDDVTGTE  568
            LSG+        + DI+IEFSG+R+GEKL+EELL  D++   +
Sbjct  524  LSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

411) B565_2775 in NC_015424


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  294 bits (1102),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 210/463 (46%), Positives = 323/463 (70%), Gaps = 26/463 (5%)

Query  17   IYFA---FSVLLIGGVRL----FFRALVQRSAQQRVAVLIYGAGSSGRQLQLALNQGQEY  69
            +YF      +LLIGG RL    + ++++ + ++++ + LI G+G +G  L   + +   Y
Sbjct  107  LYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKKK-PTLIVGGGRGGSLLIRQMMNTP-Y  164

Query  70   L---PVAFVDDDPALVK-TVIQGVNVYS-TDAIEALIERFDIKKILLAMPSASRSVRQAV  124
            +   PV  VDDD+   K ++  GV+V +    I  L+ +F+IKKI++A+P+ S+  R   
Sbjct  165  MGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQ-RLRE  223

Query  125  INRL-EQCPCEVLSIPGMADLVEGNAHIDELKEVSIEDLLGRDAVAPIPELINANICGKR  183
            IN+L E    EV+ +P + +++ G+ +++ LK V +EDLLGRD+V      I+ ++  K 
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  184  VMVTGAGGSIGSELCRQIIRCKPTQLVLFELSEYGLYAIDKELQEISYHEGLQVEIVPLL  243
            ++VTGAGGSIGSE+CRQ+ +  P +++L+  +E ++Y I++EL  + Y E  ++E++P++
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL-YKE--EIEVIPII  340

Query  244  GSVQRQHRVQAVMSTFKIQTVYHAAAYKHVPLVEYNVVEGVRNNVFGTLYCAQAAIRAKV  303
            + VQ ++R++ VM ++K   VYHAAA KHVPL+EYN  E+++NNV+GT   A+AA  A V
Sbjct  341  ADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEV  400

Query  304  ETFVLISTDKAVRPTNTMGTTKRLAELVLQSLAAAQRQTRFCMVRFGNVLGSSGSVVPLF  363
              FV++STDKAV P N MG++KR+AE+V+QS+     +T F  VRFGNVLGS GSV+PLF
Sbjct  401  SKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLF  460

Query  364  RKQIRDGGPLTLTHPDIIRYFMTIPEASQLVIQAGAMGQGGDVFVLDMGEPVKIIDLAHR  423
            +KQI  GGP+T+THP++ RYFMTIPEAS+LV+QAGA++ GG++FVLDMG PVKI+DLA  
Sbjct  461  KKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKN  520

Query  424  MIRLSGLKLKSEQHPTGDIEVKITGLRPGEKLFEELLIGEQVE  466
            +IRLSG K         DI + ++G+R+GEKLFEELL  ++++
Sbjct  521  LIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIH  556

412) NAL212_0301 in NC_015222


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  294 bits (1101),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 243/560 (44%), Positives = 370/560 (67%), Gaps = 32/560 (5%)

Query  63   FGLYRGLWRYASLPDLKRIvvavavgsvavTLMLWLFGLLRNVPGAVIMLAP-lllllIM  121
            F+LY+  W YAS+++L  IV +V+ + VA  +++ +F   ++ P   + +   ++ LL++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPFLRLYFITWMMHLLLI  119

Query  122  GGSRLIYRAWKE-RRLYSLESYEAKLVLILGAGSTAVNLVKALTGSR--EWHVVGMLDDD  178
            GGSRL   +W+  R+ +       K  LI+G+G  +  L++ +  +     + V ++DDD
Sbjct  120  GGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  179  PRKLGTRL-QGVRVRGTIKELPQWVQKLNVGHVIIAIPSVSRRIHRQALEMCSEIGVKAM  237
            + K    +  GV+V+G IK++P+ V+K+N+  +IIAIP++S++  R+   +C    V   
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  238  TVPSYADLISGKTTVSQIREIQLDDLLGRAPVVldddglhdllTGKVILVTGAGGSIGSE  297
             +P+  +++SG   V++++ ++++DLLGR PV LD  ++   LT K ILVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQLVSFEPKRIIFVELSEFSLYTIQEEFLARY-PAMNMSFVIGDIKDHARMIQLFTQF  356
            +CRQ+  F P RI+++  +E S+Y I++E+++ Y   +++  +I+D++D  RM ++   +
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  357  HPTVVFHAAAYKHVPLMEQENACQAILNNVLGTYVLAQVAINFAVDKFVLISTDKAVNPV  416
             P VV+HAAA KHVPLME +   +AI NNVLGT   A+ A    V KFV++STDKAVNP 
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQ-EAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  417  SVMGASKRLAEMVCQALQQSISKHLNADRNYPSRQTCFVMVRFGNVLGSTGSVIPKFREQ  476
            +VMGASKR+AEMV Q++++  SK            T FV VRFGNVLGS GSVIP F+ Q
Sbjct  416  NVMGASKRVAEMVIQSMNNETSK------------TDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  477  IAKGGPITITHPDMTRYFMSIPEAAQLVLQAglmggtqgggEIFVLDMGDPVKIVDLAND  536
            I  GGP+T+THP+MTRYFM+IPEA++LVLQA   G+   GGEIFVLDMG PVKIVDLA++
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQA---GALATGGEIFVLDMGKPVKIVDLAKN  520

Query  537  LIHLSGLAEGDIRIEFTGLRPGEKIHEELLATSESTLPTPHQKLRIAQACQVDEQWLSEL  596
            LI+LSG  E DI IEF+G+R+GEK+ EELL   E       +K+  ++  +++ +   EL
Sbjct  521  LIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE---EL  577

Query  597  VAWLDKVTVLSDQEVRDELI  616
               +D    L ++ VRDE+I
Sbjct  578  YNKID--DFLINESVRDEII  595

413) Sama_2244 in NC_008700


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  294 bits (1100),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 202/456 (45%), Positives = 328/456 (72%), Gaps = 26/456 (5%)

Query  121  LVFVGGAR----ALMRSLVGNGINRRGEPVIIYGAGVSGRQTALALAQ--SHEY---HPF  171
            L+++GG+R       ++++++  +++  P +I G+G   R  +L + Q  +  Y   +P 
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKK--PTLIVGGG---RGGSLLIRQMMNTPYMGMEPV  170

Query  172  AFVDDDETLHG-TVIQGLHVHSP-SIIKKLIKQQKASRVLLAMPSASRARRQQILQTLEP  229
              VDDD   +  ++  G+ V++    I  L+K+ +  ++++A+P+ S+ R ++I +  E 
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  230  LSVKVMTLPAMADLVSGNKLFSDVKEVEIEDLLGRDAVAPRKDLMAANITGKVVMVTGAG  289
             +V V  +P + +++SG+   + +K VE+EDLLGRD+V      ++ ++T K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  290  GSIGSELCRQILRLAPRKLVLFELSEFGLYSIERELQAIRAELGLDVELFPMMGSVQRQN  349
            GSIGSE+CRQ+ +++P +++L+  +E ++Y I++EL ++  E   ++E++P+++ VQ ++
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKE  347

Query  350  RVQAVMEAFKVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTAQAAIATGVETFVLIS  409
            R++ VM+A+K   VYHAAA KHVPL+E N  E+++NNV+GT  TA+AA  + V  FV++S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  410  TDKAVRPTNVMGTTKRMAELVLQALSKLNSGTRFCMVRFGNVLGSSGSVVPLFRKQIANG  469
            TDKAV P NVMG++KR+AE+V+Q++++  S T F  VRFGNVLGS GSV+PLF+KQI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  470  GPVTVTHPEITRFFMTIPEASQLVIQAGAMGIGGDVFVLDMGQSVKIVDLARKMIRLSGF  529
            GPVTVTHP +TR+FMTIPEAS+LV+QAGA++ GG++FVLDMG++VKIVDLA+++IRLSG+
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  530  EVKDEHNPDGDIEIQFSGLRPGEKLYEELLIGDNVE  565
                    + DI I+FSG+R+GEKL+EELL  D+++
Sbjct  528  K-------EEDIGIEFSGIRSGEKLFEELLNKDEIH  556

414) Gura_1702 in NC_009483


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  294 bits (1100),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 218/525 (42%), Positives = 341/525 (65%), Gaps = 20/525 (3%)

Query  77   VFQVYHITWRFVGLDELYNIGIAILIAEAVLMALLLTTSTGWLHLSHYAVSFPRSIFIND  136
            +F++YH +W + ++ EL      ILI  +V  +++ T     + +     +F R  FI  
Sbjct  61   IFDLYHRAWEYASVSEL------ILIVKSVTSSIVATGII--VPIFTQQAPFLRLYFITW  112

Query  137  GLITFLLACGLRISRRVYREVIFKKTSSAKGKRALVIGAGMTGELVLRDMARRDFADFYP  196
             ++ +LL  G R+S+R+YR  ++ K   +K K +L++G+G  G L++R+M    + +  P
Sbjct  113  -MMHLLLIGGSRLSWRIYRKTFISK--EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  197  VGILDDDSSMKVGTYIHGVRVLSTTDRLREIVRQHSVEVVIIAIPSTHYKALRKIYHLAK  256
            V ++DDDS+ +  +   GV+V +    + E+V++ ++  +IIAIP+   + LR I  L  
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  257  EAGIE--RINIVPQMYKNHERFEVSMKGIHEISIEELIGRQSVEVDYDSIEQMLAGKSIL  314
             + +E  ++  + ++       E+ ++ +  + +E+L+GR++VE+D  SI + L+ K+IL
Sbjct  230  GTNVEVFKMPNIENVMSG----EIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTIL  285

Query  315  VSGACGSIGSEIVRQVCSFNPARLVLFEIDETELHNMQLRLAREFPSLLGRIYYvvgdvr  374
            V+GA GSIGSEI RQVC F P R++L+  +E  + +++  L   +   +  +  +++DV+
Sbjct  286  VTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIE-VIPIIADVQ  344

Query  375  drsrvrgvMAAHAPELVFHAAAYKHVPMMEHNPSEAVKVNVFGTFNLAQAAVDHGVEKFV  434
            D+ R++ VM A  P +V+HAAA KHVP+ME NP EA+K NV+GT N A+AA    V KFV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  435  MISTDKAVRPTSIMGATKRVAEYVCSAFSRANV-TEFTSVRFGNVLGSRGSVLPLFMEQL  493
            M+STDKAV P ++MGA+KRVAE V  + +     T+F +VRFGNVLGSRGSV+PLF  Q+
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  494  KNGGPLTVTDREMQRYFMTIPEAVSLVLQAAVIGNNGDVMVLDMGEPVKVVELAEELIRL  553
              GGP+TVT+  M RYFMTIPEA  LVLQA+ ++  G++ VLDMG PVK+V+LA +LIRL
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  554  HGLKPYDDIAIEFVGLRPGEKLFEEILTAEEGTDATRHEKIFVAR  598
             G K  +DI+IEF G+R+GEKLFEE+L  +E       EKI+ ++
Sbjct  525  SGYKE-EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

415) Rleg2_6495 in NC_011371


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  293 bits (1099),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 195/473 (42%), Positives = 324/473 (69%), Gaps = 26/473 (5%)

Query  142  RILHKNMLAK------VLIYGAGKAGRQLAAALTNSAELNVVGYL---DDDPRLKGGVMG  192
            RI +K  ++K       LI G+G++G  L   + N++ + +   L   DD  + K ++ +
Sbjct  127  RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIAS  186

Query  193  GLPIYDP-SDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRKARVNVRTLPDLTALAQ  251
            G+ + +   D+P L   + + ++++A+P+ S+QR  EI      + V+V  +P++  +  
Sbjct  187  GVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMS  246

Query  252  GRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAGGSIGGELCRQILRNAP  311
            G + V+ ++ +E+EDLLGR++V      + K + +K ++VTGAGGSIG+E+CRQ+ + +P
Sbjct  247  GEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTP  306

Query  312  SSLILLDQNEFALYNIDAELRKLAELYEHENLQIVPILCSVRDQDRVEHIIQSWRPQTLY  371
              ++LL++ E ++Y+I+ EL     LY  E+++++PI+  V+D++R+  ++Q+ +P  +Y
Sbjct  307  DRIMLLGHGENSIYHIHQEL---IGLY-KEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  372  HAAAYKHVPLVEHNAVEGIKNNVMGTLVAARAARKYGVSNFVLISTDKAVRPTNVMGASK  431
            HAAA KHVPL+E N+ E+IKNNV+GT  +A AA+   VS+FV++STDKAV P NVMGASK
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  432  RLAEMVLQALAAESATDRLRTNFSMVRFGNVLGSSGSVVPLFRQQIKEGGPVTLTHREIT  491
            R+AEMV+Q++  E++    +T+F  VRFGNVLGS GSV+PLF++QI  GGPVT+TH  +T
Sbjct  423  RVAEMVIQSMNNETS----KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMT  478

Query  492  RYFMTISEASQLVIQAGAMGEGGDVFLLDMGEPVRIADLARKMVELSGLSVRDDISPEGD  551
            RYFMTI+EAS+LV+QAGA++ GG++F+LDMG PV+I DLA++++ LSG         E D
Sbjct  479  RYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-------EED  531

Query  552  IELSVTGLRPGEKLYEELLIGDNPETTE-HPRIMKAREDFLSWPELLKRLNSL  603
            I +  +G+R+GEKL+EELL  D+ +  +   +I +++ + +   EL ++++ +
Sbjct  532  IGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

416) PputW619_1414 in NC_010501


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 215/534 (41%), Positives = 353/534 (67%), Gaps = 44/534 (8%)

Query  75   FGMYRAVMRYFGNDALVAIIKAVTLSSLILAVVVYWYSNHQVIVPRSIIFNYWWLSLVIM  134
            F++Y+    Y +   L+ I+K+VT S +  +++V  ++++  ++   + F  W + L+++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  135  GGLRLIMRQYFLGDWFSGAHQIPFTNRDDGQVKVAIYGAGTAGN----QLLAALRMGRVM  190
            GG RL         W     +  F ++++ +    I G+G +G+    Q++ +  MG  M
Sbjct  120  GGSRL--------SW--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG--M  167

Query  191  RPVAFIDDDGDLAN-RVISGLQVYKP-KHLEQMIKETGAQEILLALPTASRARRKEILAF  248
             PV  +DDD++  +  + SG++V    K++ +++K    + I++A+PT S+ R +EI  +
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  249  LEPYPLHVRSVPAFADLASGRVKVDDIQDVDIADLLGRDPVPAQDELLWRCNKKRTVLVT  308
             E   ++V  +P + ++ SG + V+ ++ V++ DLLGRDPV  +   + +    +T+LVT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  309  GAGGSIGSELCRQIIGLEPKTLLLFDHSEFNLYSILTELEQRITRESLAVQLLPILGSVR  368
            GAGGSIGSE+CRQ+  + P  ++L++H+E ++Y I  EL      E   ++++PI++ V+
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQ  344

Query  369  NQQHLADVMSTWRVDTVYHAAAYKHVPMVEHNVAEGILNNVFGTLCTAQAALQTGVANFV  428
            +++++  VM + +   VYHAAA KHVP++E N  E+I NNV+GT  TA+AA  + V++FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  429  LISTDKAVRPTNVMGSSKRLSELILQALSREAAPVMYGDSSKISRVNKTRFTMVRFGNVL  488
            ++STDKAV P NVMG+SKR++E+++Q+++ E++              KT F  VRFGNVL
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVL  450

Query  489  GSSGSVIPLFHQQIKAGGPLTVTHPKITRYFMTIPEAAQLVVQAGAMGQGGDVFVLDMGE  548
            GS GSVIPLF +QI AGGP+TVTHP +TRYFMTIPEA++LV+QAGA++ GG++FVLDMG 
Sbjct  451  GSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGK  510

Query  549  PVKIVELAEKMVHLSGFSVRSPDNPHGDIAIEFSGLRPGEKLYEELLIGDDVSP  602
            PVKIV+LA ++++LSG+        + DI+IEFSG+R+GEKL+EELL  D++ P
Sbjct  511  PVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

417) BN4_12169 in NC_020409


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  293 bits (1097),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 215/507 (43%), Positives = 340/507 (68%), Gaps = 25/507 (4%)

Query  68   FGLYRGMWRYTSLDDYWKMLRVTTLQNLLLISFVVLRFSFAGVPRSIFVIDWILTLVLCS  127
            F+LY+  W Y+S+ +   +++  T  +++  +++V  F+  +    ++ I W++ L+L +
Sbjct  62   FDLYHRAWEYASVSELILIVKSVT-SSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIG  120

Query  128  GVRLSIRAFYAQAESMTAPSAERKTILVVGTGSLAEKIGRELVGNP---AQYTLVGFLDE  184
            G RLS R +     +  +  + +K  L+VG G  +  + R+++  P    +  LV  +D+
Sbjct  121  GSRLSWRIY---RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV--VDD  175

Query  185  DPGKRGRTI-HGKPVLGNIALMKTLVERDEVDEIFIAVSRASGEEMRLIAEACKTTGVP-  242
            D+ K+  +I  G  V G I  +  LV + ++  I+IA++  S + +R I   C  T V  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  243  FKILPAMTEIMDGKVGIKALRDVDYLDLLGRSPVTLDTDRILAYLSGQTVLVTGCGGSIG  302
            FK +P + ++M G + ++ L+ V+  DLLGR PV LD   I   L+ +T+LVTG GGSIG
Sbjct  236  FK-MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  303  SELCRQIVRFKPSHIVLVDSSEYNLYQMQMELHHGLGF----TGYTTVLGSITDTDLMTR  358
            SE+CRQ+ +F P +I+L++ +E ++Y+++ EL   +G+         +++ + D + M +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQEL---IGLYKEEIEVIPIIADVQDKERMKK  351

Query  359  TFAAHTPSTVFHAAAYKHVPMLERNPWQAVRNNILGSQTIMHAAVESGVERFVVVSTDKA  418
               A  P  V+HAAA KHVP++E NP +A++NN+LG++   +AA  + V +FV+VSTDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  419  VRPTNVMGASKRVTELLMQSLHGRGTR--FMAVRFgnvvgssgsvvPLFRRQIETGGPVT  476
            V P NVMGASKRV+E+++QS++   ++  F+AVRFGNV+GS GSV+PLF++QIE+GGPVT
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVT  471

Query  477  VTHPDVTRYFMSISEASQLILQAGSMGETGTGGEIFVLDMGVPVKIADMARDLIRLSGKK  536
            VTHP++TRYFM+I+EAS+L+LQAG++   +TGGEIFVLDMG PVKI D+A++LIRLSG K
Sbjct  472  VTHPGMTRYFMTIPEASRLVLQAGAL---ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  537  PDVDIQIIFTGLREGEKLFEELITEGE  563
             + DI I F+G+R GEKLFEEL+  +E
Sbjct  529  EE-DIGIEFSGIRSGEKLFEELLNKDE  554

418) Tnap_1260 in NC_013642


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  292 bits (1093),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 217/513 (43%), Positives = 319/513 (63%), Gaps = 22/513 (4%)

Query  58   YSIVWEYANARDFLILIRGSVISYLSNLAFFYVYRGIVLPRSVGFATFLG------SMAL  111
            Y   WEYA+  ++++++++   S ++         GI++P     A FL        M L
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVAT--------GIIVPIFTQQAPFLRLYFITWMMHL  116

Query  112  LVL--SRITWQWLTVNRLRKTSGEKRILVIGAGDAGVSILEEFEKHPHLGKIVAFV--DD  167
            L++  SR++W+      + K +  K  L++G+G +G  ++ +  + P +G    +V  DD
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  168  SPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKVRVK  227
            S ++      GV V G I    E+V K N+  I+IAIP+ S+  +  I K  +  +V V 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  228  TLPSVRELIEGRVRISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSIGSE  287
             +P++ +++ G + ++ LK + +EDLLGR+ V +D   I+K L  K ILVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  288  LCKQIARMNPAEIFLLGHGENSIYLINEFLTEHF-PEVKKKRIIADVADRKIMEHWLTQL  346
            +C+Q+ +  P  I LLGHGENSIY I++ L   +  E+    IIADV D+  M   +   
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  347  RPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDKAVNPTS  406
            +P V++H AAHKHVPLME NP EA++ NVLGT N  E +    V  FV +STDKAVNP +
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  407  VMGLTKRIAELYI--LSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPR  464
            VMG +KR+AE+ I  ++ E + T+F  VRFGNVLGSRGSV+  F++QIE GGPVTVT+P 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  465  MKRYFMSIPEAVSLILQSLLFSSGKDLFILDMGEQIPILKLVETMIMLSGYTPYQDIKIV  524
            M RYFM+IPEA  L+LQ+  +++G ++F+LDMG  + I+ L   +I LSGY   +DI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIE  535

Query  525  FTGIRPGEKMYEELLYPYEMKELTPHSKIFRVK  557
            F+GIR+GEK++EELL   E+       KI+R K
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

419) Tpet_1244 in NC_009486


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  292 bits (1093),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 217/513 (43%), Positives = 319/513 (63%), Gaps = 22/513 (4%)

Query  58   YSIVWEYANARDFLILIRGSVISYLSNLAFFYVYRGIVLPRSVGFATFLG------SMAL  111
            Y   WEYA+  ++++++++   S ++         GI++P     A FL        M L
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVAT--------GIIVPIFTQQAPFLRLYFITWMMHL  116

Query  112  LVL--SRITWQWLTVNRLRKTSGEKRILVIGAGDAGVSILEEFEKHPHLGKIVAFV--DD  167
            L++  SR++W+      + K +  K  L++G+G +G  ++ +  + P +G    +V  DD
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  168  SPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKVRVK  227
            S ++      GV V G I    E+V K N+  I+IAIP+ S+  +  I K  +  +V V 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  228  TLPSVRELIEGRVRISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSIGSE  287
             +P++ +++ G + ++ LK + +EDLLGR+ V +D   I+K L  K ILVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  288  LCKQIARMNPAEIFLLGHGENSIYLINEFLTEHF-PEVKKKRIIADVADRKIMEHWLTQL  346
            +C+Q+ +  P  I LLGHGENSIY I++ L   +  E+    IIADV D+  M   +   
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  347  RPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDKAVNPTS  406
            +P V++H AAHKHVPLME NP EA++ NVLGT N  E +    V  FV +STDKAVNP +
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  407  VMGLTKRIAELYI--LSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPR  464
            VMG +KR+AE+ I  ++ E + T+F  VRFGNVLGSRGSV+  F++QIE GGPVTVT+P 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  465  MKRYFMSIPEAVSLILQSLLFSSGKDLFILDMGEQIPILKLVETMIMLSGYTPYQDIKIV  524
            M RYFM+IPEA  L+LQ+  +++G ++F+LDMG  + I+ L   +I LSGY   +DI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIE  535

Query  525  FTGIRPGEKMYEELLYPYEMKELTPHSKIFRVK  557
            F+GIR+GEK++EELL   E+       KI+R K
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

420) TRQ2_1211 in NC_010483


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  292 bits (1093),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 217/513 (43%), Positives = 319/513 (63%), Gaps = 22/513 (4%)

Query  58   YSIVWEYANARDFLILIRGSVISYLSNLAFFYVYRGIVLPRSVGFATFLG------SMAL  111
            Y   WEYA+  ++++++++   S ++         GI++P     A FL        M L
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVAT--------GIIVPIFTQQAPFLRLYFITWMMHL  116

Query  112  LVL--SRITWQWLTVNRLRKTSGEKRILVIGAGDAGVSILEEFEKHPHLGKIVAFV--DD  167
            L++  SR++W+      + K +  K  L++G+G +G  ++ +  + P +G    +V  DD
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  168  SPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKVRVK  227
            S ++      GV V G I    E+V K N+  I+IAIP+ S+  +  I K  +  +V V 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  228  TLPSVRELIEGRVRISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSIGSE  287
             +P++ +++ G + ++ LK + +EDLLGR+ V +D   I+K L  K ILVTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  288  LCKQIARMNPAEIFLLGHGENSIYLINEFLTEHF-PEVKKKRIIADVADRKIMEHWLTQL  346
            +C+Q+ +  P  I LLGHGENSIY I++ L   +  E+    IIADV D+  M   +   
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  347  RPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDKAVNPTS  406
            +P V++H AAHKHVPLME NP EA++ NVLGT N  E +    V  FV +STDKAVNP +
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  407  VMGLTKRIAELYI--LSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPR  464
            VMG +KR+AE+ I  ++ E + T+F  VRFGNVLGSRGSV+  F++QIE GGPVTVT+P 
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  465  MKRYFMSIPEAVSLILQSLLFSSGKDLFILDMGEQIPILKLVETMIMLSGYTPYQDIKIV  524
            M RYFM+IPEA  L+LQ+  +++G ++F+LDMG  + I+ L   +I LSGY   +DI I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDIGIE  535

Query  525  FTGIRPGEKMYEELLYPYEMKELTPHSKIFRVK  557
            F+GIR+GEK++EELL   E+       KI+R K
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

421) capD2 in NC_021237


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  292 bits (1093),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 219/531 (42%), Positives = 343/531 (65%), Gaps = 42/531 (7%)

Query  68   FGLYRAVLRYFGTDALIAITKAVTLSALVMGVIVYVYSNHK-FVVPRSIVFNFWWLSLIM  126
            F+LY+    Y +   LI I K+VT S +  G+IV +++++  F+    + F  W + L++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL---RLYFITWMMHLLL  118

Query  127  IGGLRLAMRQYFLDDWFSTTQHMPFSNTDNNLPKVAIYGAGAAGNQLVAALRMGR--AMR  184
            IGG RL+ R Y          +  F + + +     I G+G +G+ L+  +      +M 
Sbjct  119  IGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  185  PVAFIDDDKSIADRVIA-GLHVYQP-KNIQRMIDATGAQEVLLAIPSSSRGRRREILSFL  242
            PV  +DDD +     IA G+ V    K+I  ++     + +++AIP+ S+ R REI  + 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  243  ENYPFHVRSVPGFMDLASGRVKVDDIQAVDIADLLGRDAVPAQEDLLERCVTKKVVLVTG  302
            E    +V  +P + ++ SG + V+ ++ V++ DLLGRD+V  +   + + +T K +LVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  303  AGGSIGSELCRQILLLRPTVLLLFEHSEFNLYSIFSELEGRVARESLSVKVLPILGTIKS  362
            AGGSIGSE+CRQ+  + P  ++L+ H+E ++Y I  EL G + +E   + V+PI++ ++ 
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEE--IEVIPIIADVQD  345

Query  363  HEKLVDIMTTWKVNTVYHAAAYKHVPMVEHNISEGFFNNVIGTLNTAQAALISGVTDFVL  422
             E++  +M + K   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA ++ V+ FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  423  ISTDKAVRPTNIMGSTKRLAELTLQALSREKDPVLFDVAGCEQIRNNTRFTMVRFGNVLG  482
            +STDKAV P N+MG++KR+AE+ +Q+++ E               ++T F  VRFGNVLG
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSMNNET--------------SKTDFVAVRFGNVLG  451

Query  483  SSGSVIPLFHKQIQSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGLGGDVFVLDMGEP  542
            S GSVIPLF KQI++GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG P
Sbjct  452  SRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKP  511

Query  543  VKIVELAEKMIHLSGLTVRSEKMPHGDIAIEFTGLRPGEKLYEELLIGDNV  593
            VKIV+LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D++
Sbjct  512  VKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

422) PSHAa0401 in NC_007481


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  292 bits (1092),  Expect = 7e-80, Method: Compositional matrix adjust.
 Identities = 208/488 (43%), Positives = 336/488 (69%), Gaps = 31/488 (6%)

Query  115  FIFAWL-CLLTVGGSR----IIVRALIGRMTTSNKDAVIIYGAGSSGRQLATALNAGPEY  169
            ++++W+  LL +GGSR    I  +++I++   ++K + +I G+G +G  L   +   P  
Sbjct  108  YFITWMMHLLLIGGSRLSWRIYRKTFISK--EGKKKPTLIVGGGRGGSLLIRQMMNTP--  163

Query  170  FVSA----FIDDDVTKHG-SIIQGIPVRA-FNDIHALIKKRKATKVLLAMPSETRARRKE  223
            +++      +DDD  K+  SI  G+ V++ ++DI  L+KK +  K+++A+P+ ++ R +E
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  224  VLAQLEPLTIKVLSIPGMADIVEGKAKLSEFRDVEIEDLLGRDPVTPKDDLMTVNITDKV  283
            +    E   + V+ +P + +++ G   ++ ++ VE+EDLLGRDPV      ++ ++T+K 
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  284  VMVTGAGGSIGSELCRQIIKLKPTKLVLFERSEIALYSIEKEL-GEYIISNTLNIELIPI  342
            ++VTGAGGSIGSE+CRQ+ K+ P +++L+ ++E ++Y I++EL G Y      +IE+IPI
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLY----KEEIEVIPI  339

Query  343  MGSVQRVNRLETVMRTFGVRTIYHAAAYKHVPLVEHNVVEGVRNNVFGTyyaakaaveak  402
            ++ VQ  +R+  VM+++    +YHAAA KHVPL+E N  E+++NNV+GT  +A AA  A 
Sbjct  340  IADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAE  399

Query  403  vDTFVLISTDKAVRPTNIMGATKRMAELVLQGLAQEQGAKHKTRFCMVRFGNVLGSSGSV  462
            V  FV++STDKAV P N+MGA+KR+AE+V+Q++ +E +   KT F  VRFGNVLGS GSV
Sbjct  400  VSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS---KTDFVAVRFGNVLGSRGSV  456

Query  463  VPLFRRQIKEGGPITLTHPDITRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGDSVKISD  522
            +PLF++QI  GGP+T+THP++TRYFMTIPEA++LV+QAGA++ GG++FVLDMG +VKI D
Sbjct  457  IPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVD  516

Query  523  LATKMVRLSGLEIKTDDTPHGDIEIKCTGLRPGEKLYEELLIGDNVE-QTSHERIMTAKE  581
            LA +++RLSG         + DI I  +G+R+GEKL+EELL  D+++ +   E+I  +K 
Sbjct  517  LAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKV  569

Query  582  VMLPLSEL  589
              +   EL
Sbjct  570  QKIEKEEL  577

423) Hoch_0082 in NC_013440


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  291 bits (1088),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 201/494 (41%), Positives = 317/494 (65%), Gaps = 24/494 (4%)

Query  152  GSRFLPRILAERTNSTGDGAQPTLLVGAGRGGLAIAREAALNPALGFEARGFIDDDPSKH  211
            GSR+  RI      S  +  +PTL+VG+GRGG  + R+    P +G E+   +DDD++K+
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  212  GREV-HGLRVYGGLDALEDAIHELAVSAVIVTTSAIAPAQLLRIVDTARALGIQVRTVSR  270
               +  G++V G +  + + +  + +  +I++ ++++  +L  I     +  ++V  ++ 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  271  AFELLDHRVDADTLREVRIEDLLSRDPVPPSLSMDDLVGAYGGKRILVTGAGGSIGSELC  330
              +++   ++ + L+ V +EDLL+RDPV   L M  +      K ILVTGAGGSIGSE+C
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPV--ELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  331  RQLARMGPAQLLLVERDETNLFEIERELSSDVARSDENATSSGAEPAGDALWVPILADIC  390
            RQ+ +  P +++L+ ++E ++++I++EL + + + + +              +PI+AD+ 
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV-------------IPIIADVQ  344

Query  391  DAKAMNEVFARHRPEVVFHAAAYKHVPMMERFPHEAVRNNVFGTLRLAEMADQHGVDSFV  450
            D   M+ V    +P VV+HAAA KHVP+ME  P+EA++NNV+GT   AE A    V  FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  451  MISTDKAVRPSSVMGASKRLAEMVVQQLAA-RSRTSFSCVRFGNVLGSRGSVVSIFRAQI  509
            M+STDKAV P++VMGASKR+AEMV+Q +    S+T F  VRFGNVLGSRGSV+++F+ QI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  510  QQGGPVTVTHPDAVRYFMTVGEAAHLVIQAGTLGSRGEVYLLDMGEPVKILELARQMISL  569
            + GGPVTVTHP+  RYFMT+ EA++LV+QAG+L++ GE+++LDMG PVKI++LA+++I L
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  570  SGATEASIAIEIIGTRPGEKLFEELKTDSEELEQTPLRKVYRCSLGAIDEPALRATLERL  629
            SG  E  I+IE+ G R+GEKLFEEL    E   +    K+YR  +  I+   L   ++  
Sbjct  525  SGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID--  582

Query  630  TFLVRAKDGDGVRD  643
             FL+     ++VRD
Sbjct  583  DFLI----NESVRD  592

424) amb0099 in NC_007626


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  291 bits (1091),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 208/513 (41%), Positives = 336/513 (66%), Gaps = 27/513 (5%)

Query  97   LYRGVWRYASVNDLVALTRaatltilvflallflttrlqalPRSVLLINWFVLLALLGGP  156
            LY+  W YASV++L+ + ++ T +I+    ++ + T+  ++ R + +I W + L L+GG+
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGGS  122

Query  157  RFIYRTFKDHHRNRRRAQGDHVRVPVLLVGAGDEAELFIRAAHSPDAEYRAVG---LLSS  213
            R+  R ++    ++     +  + P L+VG+G  + L+IR  +  ++ Y ++    ++  
Sbjct  123  RLSWRIYRKTFISK-----EGKKKPTLIVGGGRGGSLLIR--QMMNTPYMGMEPVLVVDD  175

Query  214  RGARVGRHI-HGIDVLGSTDEMGEVVAALKAKGQAPQRLVITDHRLDGSEVRQLLDDADR  272
             + +    I  G+ V G   ++ E+V  ++ K        ++++RL   E+ +L ++++ 
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRL--REINKLCEGTN-  232

Query  273  LGMTLARIPRMMDLKDGVEERVTMRPIAVEDLLGRPQAVLDRVSMESMIKGRRVLVTGAG  332
              + + ++P + ++  G  E   ++ + VEDLLGR    LD  S+   +  + +LVTGAG
Sbjct  233  --VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  333  GSIGSELVRQISDFGPASLVLFEACEFNLYAIDQE-ISLRQPGMELVPLLGDVRDPVRVG  391
            GSIGSE+ RQ+  F P  ++L+   E ++Y I+QE I+L +  +E++P+++DV+D  R+ 
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMK  350

Query  392  EAMARYRPDLVFHAAALKHVPMVEYNPDEGILTNCVGTRLVADACRANGVSLMVQISTDK  451
              M  Y+P +V+HAAA KHVP++EYNP+E+I  N +GTR  A+A +   VS  V +STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  452  AVNPTNVMGASKRVAEMYAQALDLAESDGGGTRFVTVRFGNVLGSTGSVVPLFQKQLAEG  511
            AVNP NVMGASKRVAEM  Q+++   ++ + T FV+VRFGNVLGS GSV+PLF+KQ+  G
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMN---NETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  512  GPLTVTHPDMTRYFMTVREAVELVLQASAFGIGHPAYRGKIFVLDMGEPVKIVHLARQMI  571
            GP+TVTHP+MTRYFMT+ EA  LVLQA+A++ G     G IFVLDMG PVKIV+LA+++I
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATG-----GEIFVLDMGKPVKIVDLAKNLI  522

Query  572  RLAGLRPDVDVKITFTGLRPGEKLFEELFHGSE  604
            RL+G + + D+ I F+G+R+GEKLFEEL++  E
Sbjct  523  RLSGYKEE-DIGIEFSGIRSGEKLFEELLNKDE  554

425) TVNIR_1906 in NC_019902


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  291 bits (1090),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 212/522 (41%), Positives = 357/522 (69%), Gaps = 20/522 (3%)

Query  63   FGLYRGIWRFASVPDMMRILRAVWVGAAVTMLLLAVSGRAGSLPVAVLAAYPLFLT----  118
            F+LY+  W +ASV++++ I+++V  +   T +++++  + +++    L  Y  F+T    
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPF----LRLY--FITWMMH  115

Query  119  -IGLTAPRLTYRWFKDHY-RPSGNRRRALVIGAGWSGDLLVRELIKTRAYL---PVGFLD  173
             + + ++RL+ R ++  +    G+++ +L++G+G++G LL+R++++T +Y+   PV  +D
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLVVD  174

Query  174  DDSRKLGRDL-HGVPVLGPISELDARLRELDLHIVLIAMPGAGAALMRRIVDVAAHYGVP  232
            DDS K    +  GV V G I ++   ++ +++  ++IA+P  +   +R I  +     V 
Sbjct  175  DDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  233  CVTLPSLEKLADGrvevsrlreveledllgrevITLDDAGLHAFLEGKRVLVTGAGGSIG  292
               +P++E++  G +EV++L+ VE+EDLLGR+ + LD A++   L  K +LVTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  293  SELCRQVARYAPQCLIMLEHAEYGLYAVERDMQRL-DGGVAYAALLGDVTDPVRMRQVFD  351
            SE+CRQV +++P+ +++L H+E ++Y +++++  L    +   ++++DV D  RM++V +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  352  AHRPQVVLHAAAYKHVPLVEHNAVEGVKVNVFGTKLVADLAAAYGCEKFLLVSTDKAVGP  411
            A +P VV HAAA KHVPL+E N+ E++K NV+GT+  A+ A      KF++VSTDKAV P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  412  TNVMGASKRIAELYCQSVA-EAGGAAFIVTRFGNVMGSTGSVVPLFRRQIAEGGPVTVTH  470
             NVMGASKR+AE+  QS+  E++ + F+  RFGNV+GS GSV+PLF++QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  471  PEITRYFMTIPEAVSLILQAAAMGSGGEVFVLDMGKPIRIRDLAEEMIRLSGHEPGRDIE  530
            P +TRYFMTIPEA  L+LQA+A+++GGE+FVLDMGKP++I DLA ++IRLSG     DI 
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIG  533

Query  531  LRFIGLRPGEKLHEDLFHEHENPIGTGHPKILQAQARRVSRG  572
            + F G+R+GEKL E+L++ +E        KI +++ +++ + 
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

426) Spea_1416 in NC_009901


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  290 bits (1086),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 208/454 (46%), Positives = 321/454 (71%), Gaps = 24/454 (5%)

Query  121  LVFIGGTR----TMVRAFVGTGMKRIGEPVIIYGAGVSGRQLVTALVQSHEYY----PFA  172
            L++IGG+R       ++F++   K+   P +I G+G +G  L+  ++++   Y    P  
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTP--YMGMEPVL  171

Query  173  FVDDDKSLHG-TVIQGVHVHS-PSIMRKLIREKQATKVLLALPSASRSRRKEILLSLEQL  230
             VDDD + +  ++  GV V++    +  L++  +  K+++A+P+ S+ R +EI    E  
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT  231

Query  231  AVQVLTLPAMADLVSGNKLYSDIKEVEIDDLLGRDSVRPRDDLMTANIKNKVVMVTGAGG  290
             V+V+ +P + +++SG+   + +K VE++DLLGRD+V      ++ ++ +K ++VTGAGG
Sbjct  232  NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGG  291

Query  291  SIGSELCRQIIKQSPRKLVLFELSEFGLYSIERELSALASGLGLDVEIYPMLGSVQRKNR  350
            SIGSE+CRQ+ K +P +++L+  +E ++Y I++EL +L      ++E+ P+++ VQ K+R
Sbjct  292  SIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKER  348

Query  351  IKAVMEAFEVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTAQAAIAAKVETFVLIST  410
            +K VM+A+    VYHAAA KHVPL+E N  E+++NNV+GT  TA+AA  A V  FV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  411  DKAVRPTNVMGTTKRlaelalqalaNESHSTRFCMVRFGNVLGSSGSVVPLFRKQIAAGG  470
            DKAV P NVMG++KR+AE+ +Q++ NE+  T F  VRFGNVLGS GSV+PLF+KQI AGG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  471  PVTVTHPEITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGSSVKIVDLAAKMIRLSGFD  530
            PVTVTHP +TR+FMTIPEAS+LV+QAGA++ GG++FVLDMG +VKIVDLA ++IRLSG+ 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  531  VKDDINPEGDISIEYSGLRPGEKLYEELLIGDDV  564
                   E DI+IE+SG+R+GEKL+EELL  D++
Sbjct  529  -------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

427) Taci_0039 in NC_013522


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  290 bits (1087),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 229/523 (44%), Positives = 348/523 (67%), Gaps = 22/523 (4%)

Query  67   WRQSWRNSSVPDLIQLLKVMVAFVVIMSGVGFVLGPANMPLPRGIPFIDGAITLLLWGGI  126
             +++W  +SV++LI ++K + +  ++ +G+   +   + P+ R + FI   + LLL GG 
Sbjct  65   YHRAWEYASVSELILIVKSVTS-SIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGGS  122

Query  127  RL----LARGFHEREGHSGSHLRPVVIAGAGSAGTSLAREIQRNRSCGMRVAAFLDDDPA  182
            RL      + F  +EG      +P +I G+G +G+ L R++      GM     +DDD+ 
Sbjct  123  RLSWRIYRKTFISKEGKK----KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  183  KLKMTIL-GVPVAGTLDQLGEVLDRFGASEVLIAMPSAPGSAVRLVMEQassrrvrarii  241
            K KM+I  GV V G + ++ E++ +F    ++IA+P+ +   +R +     +  V    +
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM  238

Query  242  paiaEVLSGRVSLDLVRDVEVEDLLRREAVRLDLDEIGSYLRGQRVMITGAGGSIGSELV  301
            P I +V+SG + ++ ++ VEVEDLL R++V LD+  I+  L  + +++TGAGGSIGSE+ 
Sbjct  239  PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEIC  298

Query  302  RQAIPFGPSLLVLLGRGENSLHQLEMELKGM-----DPVPPFvtvvadvrdrtrLGRVIA  356
            RQ   F P  ++LLG+GENS+ +++ EL G+     + +P    ++ADV+D+ R+ +V+ 
Sbjct  299  RQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIP----IIADVQDKERMKKVMQ  354

Query  357  RYRPSVVFHAAAHKHVPMMEEHPEEAVKNNVLGTLNVVECCIEAGVSTLVNISTDKAVNP  416
             Y+P VV+HAAAHKHVP+ME +P+EA+KNNVLGT N  E    A VS +V +STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  TSVMGASKRLAEMVVRRVADRVPPGGAYVSVRFGNVLGSRGSVVPLFKEQIRRGGPVTVT  476
             +VMGASKR+AEMV++ + +  +  + +V+VRFGNVLGSRGSV+PLFK QI  GGPVTVT
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTD-FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  477  DPEMVRYFMTIPEAAQLVLQAGGMGMNGAVFVLDMGEPVRIVDMARDLIRLSGLEPDRDI  536
            +P M RYFMTIPEA++LVLQAG+++  G +FVLDMG PV+IVD+A++LIRLSG   + DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DI  532

Query  537  RIEFTGRRPGEKLYeelltaeegteaSRHSKIFVARTEHMGLE  579
             IEF+G R+GEKL+EELL  +E        KI+ ++ + +  E
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

428) CPS_0594 in NC_003910


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  290 bits (1087),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 209/493 (43%), Positives = 337/493 (69%), Gaps = 30/493 (6%)

Query  109  PRTVPFI---FIS--LCLILIGGSRVS----VRAVISHQRWHKKASVLIYGAGSSGRQLA  159
             +  PF+   FI+  + L+LIGGSR+S     ++ IS +   KK + LI G+G +G  L 
Sbjct  99   TQQAPFLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLI  156

Query  160  TALSQGPEYHAVAFI----DDYKALQGQIIQGIPVYS-PEEISHVVERKTVQKILLAIPS  214
              + + P Y ++  +    DD +  +  I  G+ V +   +I+++V +  ++KI++AIP+
Sbjct  157  RQMMNTP-YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPT  215

Query  215  ASRARRKQVLAKIDCLGIQVLTIPGMADIVEGKAKLEEFKDVGVEDLLGRDSVEPKPELM  274
             S+ R +++    +   ++V+ +P + +++ G   ++ +K V VEDLLGRD+VE     +
Sbjct  216  LSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASI  275

Query  275  NADIADKVVMVTGAGGSIGSELCRQIIRLKPTKLVLFELSEFGLYTIDKELNE-YKQQHD  333
            + ++++K ++VTGAGGSIGSE+CRQ+ ++ P +++L+  +E ++Y I++EL   YK++  
Sbjct  276  SKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE--  333

Query  334  LAVEVLPLLGSVQRVNRIETVMKSFAVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTYYA  393
              +EV+P+++ VQ  +R+  VM+++    VYHAAA KHVPL+E N  E+++NNV+GT  +
Sbjct  334  --IEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNT  391

Query  394  ARAAINANVETFVLISTDKAVRPTNIMGTTKRMAELVLQALAKTQHSTRFCMVRFGNVLG  453
            A AA  A+V  FV++STDKAV P N+MG++KR+AE+V+Q++ +    T F  VRFGNVLG
Sbjct  392  AEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLG  451

Query  454  SSGSVVPLFRKQIKNGGPVTLTHPDITRYFMTIPEASQLVIQAGAMGKGGDVFVLDMGDA  513
            S GSV+PLF+KQI  GGPVT+THP++TRYFMTIPEAS+LV+QAGA++ GG++FVLDMG +
Sbjct  452  SRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKP  511

Query  514  VKIYDLASNIIHLSGFSVKSAELPDGDIEIKCTGLRPGEKLYEELLIGDNV-SGTSHERI  572
            VKI DLA N+I+LSG+        + DI I  +G+R+GEKL+EELL  D++ +    E+I
Sbjct  512  VKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKI  564

Query  573  MTAQEVMLDWDEL  585
              ++   ++ +EL
Sbjct  565  YRGKVQKIEKEEL  577

429) TOL2_C08050 in NC_018645


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  290 bits (1085),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 210/507 (42%), Positives = 334/507 (66%), Gaps = 20/507 (3%)

Query  64   GLYKGMFRYVGISDSLKLFRGTVlssliiiaiiliMKRFQGYSRAVFLIDGVLTFLFTGG  123
            +LY     Y ++S+ + + ++   S +    I+ I  +   + R +++I  ++ +L+ GG
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  124  LRISIRFLFKEYMSKQENKSGFNMFKKNKDVMPVLIYGAGNSGEKLYREIVENPRLNYDI  183
             R+S R+  K ++SK+ +K             P LI G+G +G  L R++++ P +  + 
Sbjct  122  SRLSWRIYRKTFISKEGKKK------------PTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  184  KGFGDDNKKKQGRAI-HGVPVLGGVEQLSGIKEKHKIREVLIAMPSSTGQQMRRVVDECK  242
                DD+ +KQ  +I  GV V G + +++ +  K +I+ ++IA+P+ + Q++R +   C 
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  243  ACALPFKTLPGMGELINGKVSVKVLRDVSYKDLLRRKPVELDTDKISGYINDKIVLVTGA  302
            +  +    +P + ++++G + V+ L+ V   DLL R PVELD   IS  + +K +LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  303  GGSIGSELCRQIIKFQPRQLVLLDVSEPNLYSIQMELK--HRAGYQRYATVLGQIQDEDL  360
            GGSIGSE+CRQ+ KF P +++LL+ +E ++Y I+ EL    +   +    +++++QD + 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEV-IPIIADVQDKER  348

Query  361  IDGVMQRYQPQVIFHAAAYKHVPMLERNPWQAVSNNIRGNQVMLEKALEYGVGHFVLVST  420
            +  VMQ Y+P V++HAAA KHVP++E NP +A+ NN+ G +   E A    V+ FV+VST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  421  DKAVRPTNIMGASKRVCELLVQSYMGNGTRM--MAVRFGNVVGSSGSVIPLFREQIERGG  478
            DKAV P N+MGASKRV E+++QS   + ++   +AVRFGNV+GS GSVIPLF+ QIE GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  479  PVTVTHPEVTRYFMTIPEASQLILQAGTQGQGGETFILEMGTPIKIADMARDLIRLSGKE  538
            PVTVTHP +TRYFMTIPEAS+L+LQAG+ + GGE F+L+MG P+KI D+A++LIRLSG  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  539  PDDDIEIQFTGLRQGEKLYEELITEGE  565
             ++DI I+F+G+R GEKL+EEL+  +E
Sbjct  529  -EEDIGIEFSGIRSGEKLFEELLNKDE  554

430) Rumal_1785 in NC_014833


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  290 bits (1085),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 222/540 (42%), Positives = 347/540 (65%), Gaps = 48/540 (8%)

Query  76   VFVHGYNKLYRSIWRFASFSELKRVTFATFELVLLHSLLISVMFGRMP-ISYYIIGPILQ  134
            VF + ++ LY+  W +AS SEL  +  +    ++  ++++++   + P +  Y+I  +++
Sbjct  57   VFAQIFD-LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMH  115

Query  135  FCFVIGIRFC---YRFVLLERERRSDKETKVDRRYKRIMLVGAGNAGQMILRDIEQSRNL  191
            + ++ G R+    YR  ++ +E +           K  ++VG+G +G +++R++ ++  +
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKK----------KPTLIVGGGRGGSLLIRQMMNTPYM  165

Query  192  KEKVVCIIDDNPNKWDRYI-DGVPIVGGRDDILLSAQKYNVNAIYVAIPSASAEDRRELL  250
                V ++DD++NK    I  GV + G   DI    +K+N++ I +AIP+ S +  RE+ 
Sbjct  166  GMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREIN  225

Query  251  NICKETGCELKNLPGLFQFVTGDVTVAKMKEVAIEDLLGRDPIEMDMSDVYSNLQGKVVL  310
            ++C  T  E+ ++P + + ++G++ V K+K V +EDLLGRDP+E+DM+ +  +L  K +L
Sbjct  226  KLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTIL  285

Query  311  VTGGGGSIGSELCRQVAKHNPKQLIIFDVYENNAYEIQMELRRN-MPELDLEVLIGSVRD  369
            VTG+GGSIGSE+CRQV K  P ++++++  EN+ Y+I+ EL      E+++  +I+ V+D
Sbjct  286  VTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQD  345

Query  370  NKRINEVFEKYHVDIVYHAAAHKHVPLMEDSPCEAIKNNVIGTYKTAYAALRNGCQRFVL  429
            + R++ V + Y   +VYHAAAHKHVPLME +P EAIKNNV+GT +TA AA      +FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  430  ISTDKAVNPTNIMGASKRLCEMIIQTFDYMVKNGRWNELPKIHSHMTDSDWKFDVLPRGL  489
            +STDKAVNP N+MGASKR+ EM+IQ+                   M +   K        
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQS-------------------MNNETSK--------  438

Query  490  IPQTQFCAVRFGNVLGSNGSVIPLFKKQIAEGGPVTVVDKNINRFFMSIPEAVSLVLQAS  549
               T+F AVRFGNVLGS GSVIPLFKKQI  GGPVTV +  + R+FM+IPEA  LVLQA+
Sbjct  439  ---TDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAG  495

Query  550  VLGNGSEIYVLDMGEPIKIDTLARNLIKLSGHKPDVDIKIVYTGLRPGEKLYEEKLMAEE  609
             L+ G+EI+VLDMG P+KI  LA+NLI+LSG K + DI I ++G+R+GEKL+EE L  +E
Sbjct  496  ALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKLFEELLNKDE  554

431) Sbal223_1486 in NC_011663


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  290 bits (1085),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 213/517 (42%), Positives = 351/517 (68%), Gaps = 35/517 (6%)

Query  68   LGLYRAVLRYMGLQALTAILFGVIASTIIL-VIVAYYSEAQLPRTVPIIYAA--FALVFV  124
            ++LY+    Y ++  L  I+ +V +S +   +IV+ +++   +  + + + +    L+++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQ--APFLRLYFITWMMHLLLI  119

Query  125  GGTRAM----VRSLVGSGMKRVGEPVIIYGAGVSGRQLVTALVQSHEYY----PFAFVDD  176
            GG+R       +++++   K+   P +I G+G +G  L+  ++++   Y    P   VDD
Sbjct  120  GGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTP--YMGMEPVLVVDD  175

Query  177  DESLHGIVI-QGVYVHS-PSIIKKLINQNSATKVLLAMPSAPRSRRQEILLQLEPLAVQV  234
            D + + + I  GV V++    I  L+++ +  K+++A+P+ ++ R +EI    E   V+V
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  235  LTLPAMADLVNGTKLYSDIKEVEIDDLLGRDAVNPRGDLLSANIRNKVVMVTGAGGSIGS  294
            + +P + ++++G    + +K VE++DLLGRD+V+     +S ++ +K ++VTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  295  ELCRQILKQNPKKLVLFELSEYALYAIERELRLTAHELGL---DVEIFPMMGSVQRANRI  351
            E+CRQ+ K  P +++L+  +E ++Y I++EL      +GL   ++E++P+++ VQ  +R+
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQEL------IGLYKEEIEVIPIIADVQDKERM  349

Query  352  EAVMKAFSVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTAQAAIAAKVETFVLISTD  411
              VM+A+    VYHAAA KHVPL+E N  E+++NNV+GT  TA+AA  A V  FV++STD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  412  KAVRPTNIMGTTKRMAELVLQALSNLNNNTRFCMVRFGNVLGSSGSVVPLFRSQIANGGP  471
            KAV P N+MG++KR+AE+V+Q+++N  ++T F  VRFGNVLGS GSV+PLF+ QI  GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  472  VTVTHPEITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKSVKIVDLAAKMIRLSGFEV  531
            VTVTHP +TR+FMTIPEAS+LV+QAGA++ GG++FVLDMGK+VKIVDLA ++IRLSG+  
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-  528

Query  532  KDEKNPDGDIAIEFSGLRPGEKLYEELLIGDDVTGTE  568
                  + DI+IEFSG+R+GEKL+EELL  D++   +
Sbjct  529  ------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

432) CXIVA_25490 in NC_015737


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  289 bits (1083),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 226/525 (44%), Positives = 342/525 (66%), Gaps = 38/525 (7%)

Query  77   LYKSIWRFASYSELMRMILATVITGASYAACMSGFVRRMP-VSYFVFGIIIQFVLTLGIR  135
            LY   W +AS SEL+ ++ +   +  + +  ++ F ++ P +  + +  +++++L  G R
Sbjct  64   LYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSR  123

Query  136  FSYRFILLLRARRNEDEAGKNVMLIGAGAAGQMIFRDIRRSRETSETVCCFIDDNPNKWG  195
            +S R  +  ++  + +   K  +++G+G +G +++R++  +   +      +DD++NK  
Sbjct  124  LSWR--IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQK  181

Query  196  RYIDN-VPVFGGRESILEAVRKFEIEKIYVAIPSAAPKDKREILRICNETSCELMNLPGM  254
              I + V V G    I E V+KF+I KI +AIP+ + +  REI ++C+ T+ E+ ++P +
Sbjct  182  MSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNI  241

Query  255  YQIYTGQVSISKMKPVQIEDLLGRDPIRPDMKEVFKYITGKVVLITGVG-SIGSELARQI  313
             ++ +G++ ++K+K V++EDLLGRDP+  DM  + K +T K +L+TG G SIGSE+ RQ+
Sbjct  242  ENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  314  ASHHPKHLILFDVYENNAYEVQQELKKKY-PDLELDTIIGSVRDSRKVFQLFEKFRPEIV  372
                P +++L++  EN+ Y+++QEL   Y  ++E+  II+ V+D  ++ ++ + ++P +V
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  373  YHAAAHKHVPLMEDSPCEAIKNNAIGTYKTAYAAMAHGCKRFVLISTDKAVNPTNIMGAS  432
            YHAAAHKHVPLME +P EAIKNN +GT +TA AA      +FV++STDKAVNP N+MGAS
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  433  KRLCEMIIQAFDAKIKEGKAYEIPQLFTHGVKDAMTAPEVIEALKKTSTEFVAVRFGNVL  492
            KR+ EM+IQ+ +                                  + T+FVAVRFGNVL
Sbjct  422  KRVAEMVIQSMNNE-------------------------------TSKTDFVAVRFGNVL  450

Query  493  GSNGSVIPLFKKQIAAGGPVTVTHPDIIRYFMTIPEAVSLVLLAGTYAKGGEIFVLDMGE  552
            GS GSVIPLFKKQI AGGPVTVTHP++ RYFMTIPEA  LVL AG+ A GGEIFVLDMG 
Sbjct  451  GSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGK  510

Query  553  PVKIDTLARNLIRLSGYTPDVDIKIEFTGLRKGEKLFEEKLMAEE  597
            PVKI  LA+NLIRLSGY  + DI IEF+G+R GEKLFEE L  +E
Sbjct  511  PVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKLFEELLNKDE  554

433) Dde_0360 in NC_007519


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  289 bits (1082),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 208/507 (42%), Positives = 341/507 (68%), Gaps = 17/507 (3%)

Query  62   VFSMYRGMWRYTSLRDSILLLRAASVQSLLVIAGVAYLTGFAGYSRAVFGMDFLLTFLFT  121
            +F +Y+  W Y+S+ + IL++++ +   +     V+ +T  A + R  F +  ++ +L+ 
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYF-ITWMMHLLLI  119

Query  122  GGARLGIRILFSLRETGRFWLPMTGRTARKGARRVIIIGAGRAGERLVSELNRDVSLGYF  181
            GG+RL+ RI         ++    ++ ++K  +  +I+G+GR+G  L+ ++     +G  
Sbjct  120  GGSRLSWRI---------YRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  182  PVGFVDNNPALKGRTI-HGRPVMGTLDRLPEAIVSTRAEELLIALTEASSEQVRHIVQAC  240
            PV  VD+++  +  +I  G  V G +  +PE +       ++IA+   S +++R+I + C
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  241  SETGLPCKILPPMNEILDFKRGIKNMREVNYLDLLGRSPVELDTGAISRYLQGKCILVTG  300
              T +    +P +++++     +++++ V+  DLLGR PVELD ++IS+ L  K ILVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  301  CGGSIGSELVRQIIRYAPARLVLVDASEFNLYKIQMDLEHVHGFH-DYVAILGNIRDAHL  359
             GGSIGSE+ RQ+ +++P R++L++ +E ++Y I+ +L  +   + + ++I+++++D + 
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  360  MRTTFAAHKPEAVFHAAAYKHVPMLERNPWQAVQNNILGTQTLMQAAHDAGVQRFVVVST  419
            M+    A KP  V+HAAA KHVP++E NP +A++NN+LGT+   +AA  A V +FV+VST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  420  DKAVRPTNVMGASKRVTELLMRRFSGSSTR--FMAVRFgnvvgssgsvvPLFLDQIARGG  477
            DKAV P NVMGASKRV+E++++  +  +++  F+AVRFGNV+GS GSV+PLF  QI  GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  478  PVTVTHPEVTRYFMSIAEAAQLILQAGTMAQGGEIFVLDMGVPVKIADMAKDLIRLAGLE  537
            PVTVTHP +TRYFM+I+EA++L+LQAG++A GGEIFVLDMG PVKI D+AK+LIRL+G  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  538  PEVDIPIVFTGLREGEKLYEELITADE  564
             E DI I F+G+R GEKL+EEL+  DE
Sbjct  529  EE-DIGIEFSGIRSGEKLFEELLNKDE  554

434) Psest_1825 in NC_019936


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  289 bits (1082),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 231/561 (42%), Positives = 355/561 (64%), Gaps = 43/561 (7%)

Query  76   FGMYRAVMRYFGNDALMAIAKAVTlsalllslaV-YWNSDAPKLIPRSMVFNYWWLSLVL  134
            F++Y+    Y +   L+ I K+VT S +  ++ V     +AP L    + F  W + L+L
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL---RLYFITWMMHLLL  118

Query  135  IGGLRLVMRQYFMGDWFSPTTLTKFKGKEAGLPKVAVYGAGAAGNQLVAALRMGR--AMR  192
            IGG RL         W        F +KE+      + G+G +G+ L+  +      +M 
Sbjct  119  IGGSRL--------SW--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  193  PVAFIDDDPNLHNRVIA-GLRVY-SAKHIGQLVEDTGAGEILLAIPSASRGRRREILEML  250
            PV  +DDD+N ++  IA G++V    K+I +LV       I++AIP+ S+ R REI  + 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  251  ERFPLHVRSVPGFMDLASGKVQVEDIQEVDIADLLGRDAVPPQQALFEKCIRGKVVMVTG  310
            E   ++V  +P + ++ SG ++V+ ++ V++ DLLGRD+V  + A + K +  K ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  311  AGGSIGSELCRQILSNKPQALLLFEHSEFNLYSIHMELERLIERTSLPIRLVPILGSIRN  370
            AGGSIGSE+CRQ+    P+ ++L+ H+E ++Y IH EL  L       I ++PI++ +++
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQD  345

Query  371  ADRLLDVMRTWGVETIYHAAAYKHVPMVEHNVAEGVLNNVIGTLNTAQAAVQAGVSNFVL  430
             +R+  VM++     +YHAAA KHVP++E N  E++ NNV+GT NTA+AA  A VS+FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  431  ISTDKAVRPTNVMGSTKRVAELVLQALSREPAPGLFGTAGSVHHVNKTRFTMVRFGNVLG  490
            +STDKAV P NVMG++KRVAE+V+Q+++ E +              KT F  VRFGNVLG
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLG  451

Query  491  SSGSVIPRFYAQIRAGGPVTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGQP  550
            S GSVIP F  QI AGGPVTVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG+P
Sbjct  452  SRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKP  511

Query  551  VKIAELAEKLIHLSGLSVRSEKCPHGDIAIEYTGLRPGEKLYEELLIGDNVSPTE-HPMI  609
            VKI +LA +LI+LSG         + DI+IE++G+R+GEKL+EELL  D++ P +    I
Sbjct  512  VKIVDLAKNLIRLSG-------YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKI  564

Query  610  MRADEEYLDWDVLKDRLAKLL  630
             R+  + ++ + L +++  +L
Sbjct  565  YRGKVQKIEKEELYNKIDDFL  585

435) Tmari_1556 in NC_021214


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  288 bits (1079),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 218/516 (43%), Positives = 322/516 (63%), Gaps = 28/516 (5%)

Query  58   YSIVWEYANARDFLILIRGSVISYLSNLAFFYVYRGIVLP---RSVGFAV--FLGSMVLL  112
            Y   WEYA+  ++++++++   S ++         GI++P   +   F    F+  M+ L
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVAT--------GIIVPIFTQQAPFLRLYFITWMMHL  116

Query  113  VL---SRITWQ---WMIVNGRGKVPGEKRILIIGAGDAGVSILEEFEKHPHLGKIVAFV-  165
            +L   SR++W+     +++  GK    K  LI+G+G +G  ++ +  + P +G    +V 
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGK---KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  166  -DDSPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKV  224
             DDS ++      GV V G I    E+V K N+  I+IAIP+ S+  +  I K  +  +V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  225  RVKTLPSVRELIEGRVRISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSI  284
             V  +P++ +++ G + ++ LK + +EDLLGR+ V +D   I+K L  K ILVTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  285  GSELCKQIARMNPAEIFLLGHGETSIYLINEFLTEHF-PEVKKKRIIADVADRKIMEHWL  343
            GSE+C+Q+ +  P  I LLGHGE SIY I++ L   +  E+    IIADV D+  M   +
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  344  TQLRPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDKAVN  403
               +P V++H AAHKHVPLME NP EA++ NVLGT N  E +    V  FV +STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  404  PTSVMGLTKRIAELYI--LSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVT  461
            P +VMG +KR+AE+ I  ++ E + T+F  VRFGNVLGSRGSV+  F++QIE GGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  462  DPRMKRYFMSIPEAVSLILQSLLFSSGKDLFILDMGEQIPILKLAETMIMLSGYTPYQDI  521
            +P M RYFM+IPEA  L+LQ+  +++G ++F+LDMG  + I+ LA  +I LSGY   +DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDI  532

Query  522  KIVFTGIRPGEKMYEELLYPYEVKELTPHSKIFRVK  557
             I F+GIR+GEK++EELL   E+       KI+R K
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

436) TM1548 in NC_000853


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  288 bits (1079),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 218/516 (43%), Positives = 322/516 (63%), Gaps = 28/516 (5%)

Query  58   YSIVWEYANARDFLILIRGSVISYLSNLAFFYVYRGIVLP---RSVGFAV--FLGSMVLL  112
            Y   WEYA+  ++++++++   S ++         GI++P   +   F    F+  M+ L
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVAT--------GIIVPIFTQQAPFLRLYFITWMMHL  116

Query  113  VL---SRITWQ---WMIVNGRGKVPGEKRILIIGAGDAGVSILEEFEKHPHLGKIVAFV-  165
            +L   SR++W+     +++  GK    K  LI+G+G +G  ++ +  + P +G    +V 
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGK---KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  166  -DDSPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKV  224
             DDS ++      GV V G I    E+V K N+  I+IAIP+ S+  +  I K  +  +V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  225  RVKTLPSVRELIEGRVRISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSI  284
             V  +P++ +++ G + ++ LK + +EDLLGR+ V +D   I+K L  K ILVTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  285  GSELCKQIARMNPAEIFLLGHGETSIYLINEFLTEHF-PEVKKKRIIADVADRKIMEHWL  343
            GSE+C+Q+ +  P  I LLGHGE SIY I++ L   +  E+    IIADV D+  M   +
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  344  TQLRPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDKAVN  403
               +P V++H AAHKHVPLME NP EA++ NVLGT N  E +    V  FV +STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  404  PTSVMGLTKRIAELYI--LSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVT  461
            P +VMG +KR+AE+ I  ++ E + T+F  VRFGNVLGSRGSV+  F++QIE GGPVTVT
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  462  DPRMKRYFMSIPEAVSLILQSLLFSSGKDLFILDMGEQIPILKLAETMIMLSGYTPYQDI  521
            +P M RYFM+IPEA  L+LQ+  +++G ++F+LDMG  + I+ LA  +I LSGY   +DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-EDI  532

Query  522  KIVFTGIRPGEKMYEELLYPYEVKELTPHSKIFRVK  557
             I F+GIR+GEK++EELL   E+       KI+R K
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

437) TSC_c03010 in NC_014974


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  288 bits (1079),  Expect = 7e-79, Method: Compositional matrix adjust.
 Identities = 217/488 (45%), Positives = 338/488 (70%), Gaps = 17/488 (3%)

Query  123  YWEGKRGKGVQGTRVLVVGAGEAGSMVVREMLRHPEAGLYPVGFLDDDPNKRGQTIA-GV  181
            Y+    +K  +    L+VG+G +GS+++R+M+  P  G+ PV  +DDD+NK+  +IA GV
Sbjct  129  YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGV  188

Query  182  RVMGTLEALPQvaraleveevlvaIPSAPGSVVRKVVELSRAAGVRYRILPGVYEILSGR  241
            +V G +  +P++ + +++  +++AIP+ +   +R +  L  ++ V    +P + +++SG 
Sbjct  189  KVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGE  248

Query  242  VGISQIrevrledllrrepvrlNLEEIAGYLEGRVVLVTGAGGSIGSELVRQVARFHPEQ  301
            + +++++ V +EDLL R+PV L++  I+  L  + +LVTGAGGSIGSE+ RQV +F P++
Sbjct  249  IEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDR  308

Query  302  VVLLGRGENSLFLLEKELEASW-PDLKYKVVVADVRDLERLRRVFQLYRPQVVFHAAAHK  360
            ++LLG+GENS++ +++EL +    ++    ++ADV+D ER+++V Q Y+P VV+HAAAHK
Sbjct  309  IMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHK  368

Query  361  HVPLMETNPDEAIFNNVRGTQNVVELCLEFGVERLVNISTDKAVNPTSVMGASKRVAEQV  420
            HVPLME NP+EAI NNV GT+N  E      V ++V +STDKAVNP +VMGASKRVAE V
Sbjct  369  HVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMV  428

Query  421  VAWGASRAASGQVFVSVRFGNVLGSRGSVVPVFLEQIKRGGPVTVTHPEMRRYFMTIPEA  480
            +    + ++  + FV+VRFGNVLGSRGSV+P+F  QI  GGPVTVTHP M RYFMTIPEA
Sbjct  429  IQSMNNETSKTD-FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEA  487

Query  481  AQLVLQAGGMGENGDVYILDMGEPVRILDLAKDLIRLVGLEPYR--DIDIVFTGVRPGEK  538
            ++LVLQAG+++  G++++LDMG PV+I+DLAK+LIRL G   Y+  DI+I F+G+R+GEK
Sbjct  488  SRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG---YKEEDIGIEFSGIRSGEK  544

Query  539  LFeelltaeegteaSRHEKIWVARKSQVPPEFPHLLEELYRAARQGESLLVRQTLRRLVP  598
            LFEELL  +E       EKI  ++  ++        EELY      + +L+ +++R  + 
Sbjct  545  LFEELLNKDEIHPEQVYEKIYRGKVQKIEK------EELYNKI---DDFLINESVRDEII  595

Query  599  SYQPEGQT  606
             +  + +T
Sbjct  596  FFVNNNKT  603

438) wbpM in NC_021505


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  288 bits (1078),  Expect = 8e-79, Method: Compositional matrix adjust.
 Identities = 223/531 (42%), Positives = 346/531 (66%), Gaps = 41/531 (7%)

Query  70   FGLYRAVMRYFGNDALIAIIKAVTLSALILGFIIYWASNHQNVVPRSITFNYWWLSLIMV  129
            F+LY+    Y +   LI I+K+VT S +  G+I+     +Q    R + F  W + L+++
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLR-LYFITWMMHLLLI  119

Query  130  GGLRLAMRQYFLGDWFATAVQHVPFANRNDGLPRVAIYGAGSAGNQLVAALRMG--KAMR  187
            GG RL+        W    + +  F ++++      I G+G +G+ L+  +      +M 
Sbjct  120  GGSRLS--------W---RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  188  PVAFIDDDGSITDRVIA-GLQVYQP-EQLQRMIDDTGAEEILLALPSVSRSRRREILNLL  245
            PV  +DDD++     IA G++V     ++  ++       I++A+P++S+ R REI +L 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  246  EGYPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQGDLLQHCIIDQTVMVTG  305
            EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  +   +   + ++T++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  306  AGGSIGSELCRQILGQTPRTLLLFEHSEFNLYTIAGELEQRILREGLAVQLIPILGSVRD  365
            AGGSIGSE+CRQ+   TP  ++L+ H+E ++Y I  EL   + +E   +++IPI++ V+D
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKE--EIEVIPIIADVQD  345

Query  366  QAKMLDVMRAWQVDTVYHAAAYKHVPIVEHNIAEGLSNNVFGTLYTAQAALQAGVSNFVL  425
            + +M  VM+A +   VYHAAA KHVP++E N  E++ NNV+GT  TA+AA  A VS+FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  426  ISTDKAVRPTNVMGSTKRLAEMVLQALSNELAPVLMGDTGNVSQVNKTRFTMVRFGNVLG  485
            +STDKAV P NVMG++KR+AEMV+Q+++NE               +KT F  VRFGNVLG
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSMNNE--------------TSKTDFVAVRFGNVLG  451

Query  486  SSGSVIPLFHKQIKNGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGEP  545
            S GSVIPLF KQI  GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG P
Sbjct  452  SRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKP  511

Query  546  VKIVELAEKMIHLSGFSIRSERNPLGDIAINFTGLRPGEKLYEELLIGDNV  596
            VKIV+LA ++I+LSG+          DI+I+F+G+R+GEKL+EELL  D++
Sbjct  512  VKIVDLAKNLIRLSGYKE-------EDIGIEFSGIRSGEKLFEELLNKDEI  555

439) TOL_2266 in NC_020888


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  287 bits (1076),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 192/446 (44%), Positives = 306/446 (69%), Gaps = 18/446 (4%)

Query  126  RLFVRGMVAQLIKSNAEPVIIYGAGKQGMSLVHALSSSEFY--RPVAFVDDSRKKQKTSI  183
            R++ +  +++   ++  P +I G+G+ G  L++ + ++ +    PV  VDD  +KQK SI
Sbjct  127  RIYRKTFISK--EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSI  184

Query  184  -QGLKVWPS-KQLDDLCDTYGVKKILLAVGKTNMQTRKHLIEELAE-RKLEILITPSFGD  240
              G+KV    K++ +L       K ++    T  Q R + I+ L E  ++E++  P++ +
Sbjct  185  ASGVKVQGCIKDIPELVKK-FNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  241  IISGRAKIEEVREVDIEDLLGRDCVAPNSTLLETSVRDKVVLITGAGGSIGSELCRQVLM  300
            ++SG   ++ ++ V++EDLLGRD V  + + +   + +K +L+TGAGGSIGSE+CRQV  
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  301  KKPTKLVLLELNEFSLYSIEQELQATNEELKLSVPIVSILGSVQKQNRLETIFKTFNVQT  360
              P +++LL   E S+Y I+QEL +   E    + +++I++ VQ ++R+  + ++++   
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  361  IYHAAAYKHVPMVECNVVEGVRNNVFGSWYCAEAAITSGVERFILISTDKAVRPTNVMGA  420
            +YHAAA KHVP++E N  E+++NNV+G++  AEAA  + V +F+++STDKAV P NVMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  421  SKRMAELVLQALSTRQTDTLFSMVRFGNVLDSSGSVVPRFRKQIKEGGPITVTHPDIIRY  480
            SKR+AE+V+Q+++   + T F  VRFGNVL+S GSV+P F+KQI  GGP+TVTHP++ RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  481  FMTIPEASQLVIQASAMAKGGDVFVLDMGEPVKIVSLAKKMIHLSGLTERTDINPNGDIE  540
            FMTIPEAS+LV+QA+A+A GG++FVLDMG PVKIV LAK++I+LSG  E        DI 
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE-------EDIG  533

Query  541  IQFTGLRPGEKLFEELLISEDVEGTE  566
            I+F+G+R+GEKLFEELL  ++++  +
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQ  559

440) Pmob_1801 in NC_010003


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  287 bits (1074),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 206/459 (45%), Positives = 308/459 (68%), Gaps = 8/459 (1%)

Query  125  RIYWFSRHSRNYKKRLNGIKNILIIGAGDAGTELLGEYERHPEEG-SVVGFLDDDPEKIG  183
            R+ W     + +  +    K  LI+G+G +G+ L+ +    P  G   V  +DDD++K  
Sbjct  123  RLSW-RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQK  181

Query  184  RNI-RGYPVLGKINQVMDFVEKYNVEEVIIAIPSASSDQIKKIIDYVDTSKVRLKTLPGI  242
             +I  G  V G I+++ ++V K+N+  +IIAIP+ S ++++ I    + ++V +  +P I
Sbjct  182  MSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNI  241

Query  243  LEILDNKLSLGFLREVDISDLLGRKEVSVDLKEIKDYIKGKKILVTGAGGSIGSEICRQV  302
             +++   + +  L+ V++ DLLGR  V +D+  I   +  K ILVTGAGGSIGSEICRQV
Sbjct  242  ENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQV  301

Query  303  LPMGPKALFLLGKGENSIFEISNELKDKFSDAF-IEEIIADVSDENRMRYLFSKYRFDVV  361
                P  + LLG GENSI++I +EL + + + + +  IIADV D +RM+ +   Y+  VV
Sbjct  302  CKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVV  361

Query  362  FHAAAHKHVPLMQKNPTEAFRVNTIGTYTVAKLSGEYNVERFVFISTDKAIKPTSIMGAS  421
            +HAAAHKHVPLM+ NP EA++ N +GT   A  +   +V +FV +STDKA++P ++MGAS
Sbjct  362  YHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGAS  421

Query  422  KRLGEIIVKTMSN-FYQTKYGIVRFGNVLGSRGSVIPIFKEQIQKGGPVTVTHPNMKRYF  480
            KR++E+++++M+N   +T +  VRFGNVLGSRGSVIP+FK QI+ GGPVTVTHP M RYF
Sbjct  422  KRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  481  MTIPEAVSLVLQCGQFAQKAEIFVLEMGAPVNIDRLARDLIRLSGYIPDQDIKIVYTGIR  540
            MTIPEA  LVLQ G +A  +EIFVL+MG PV+I  LA++LIRLSGY  ++DI I ++GIR
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIGIEFSGIR  540

Query  541  PGEKLYEEIFLEDEDYEKTRNRRIFISKSNNHEINKEKL  579
            +GEKL+EE++  DE        +I+  +++ + I+KE L
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKIY--RGKVQKIEKEEL  577

441) VSAL_I3033 in NC_011312


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  287 bits (1074),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 202/461 (44%), Positives = 318/461 (69%), Gaps = 35/461 (7%)

Query  124  VGGSRLI----IRSLVAQSSNKSGNPVLIYGAGSAGRQLALALRQSRTHKVVG----FVD  175
            +GGSRL      ++++++ ++K  +P LI G+G +G   +L +RQ      +G    +V 
Sbjct  119  IGGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGG---SLLIRQMMNTPYMGMEPVLVV  173

Query  176  EDPTLQNTMMMGLYVYTAACAEKI---IINHGVKQILLAIPSASRRRRKKVLDTISLLPV  232
            +D + ++ M ++  V   +C   I   + +  +K+I++AIP+ S++R + +        V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  233  EIRTVPDMSDIVAGNASIDELKDVSIDDLLGRDPVAPQQALMEANIKDKVVMVTGAGGSI  292
            E+  +P++ ++++G+  ++ LK V ++DLLGRDPV  + A +  ++ +K ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  293  GSELCRQIVRNKPKALVLFELSEFALYQIDRELSLLVEAEGLGIQIIPLLGSVQRINRLS  352
            GSE+CRQ+ +  P  ++L+  +E ++Y+I++EL  L   E   I++IP+++ VQ  +R+ 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDKERMK  350

Query  353  KVMGSFKVQTVYHAAAYKHVPLVEYNVVEGVRNNVFGTNYTARAAIEAKVESFVLISTDK  412
            KVM ++K   VYHAAA KHVPL+EYN  E+++NNV+GT  TA AA  A V  FV++STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  413  AVRPTNIMGTTKRMAELGLQALAEQQNKIRAKDATAGTRFCMVRFGNVLGSSGSVVPVFK  472
            AV P N+MG++KR+AE+ +Q++ ++ +K         T F  VRFGNVLGS GSV+P+FK
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETSK---------TDFVAVRFGNVLGSRGSVIPLFK  461

Query  473  RQIENREPITVTHEEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKIVDLAKNL  532
            +QIE   P+TVTH  +TR+FMTIPEA++LV+QAGA++ GG++FVLDMG +VKIVDLAKNL
Sbjct  462  KQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNL  521

Query  533  IRLSGLEVKDESNPYGDIEIHYTGLRPGEKLYEELLIGDNV  573
            IRLSG   K+E     DI I+++G+R+GEKL+EELL  D++
Sbjct  522  IRLSGY--KEE-----DIGIEFSGIRSGEKLFEELLNKDEI  555

442) wbpM in NC_016830


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  287 bits (1074),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 215/511 (43%), Positives = 334/511 (66%), Gaps = 39/511 (7%)

Query  124  FNYWWLSLIMIGGLRLMMRQYFLGDWFTAAQHVPFTNRDDGLPKVAIYGAGAAGNQLVAA  183
            F  W + L++IGG RL  R Y          +  F ++++      I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  184  LRMGR--VMRPVAFIDDDNSIADRVIA-GLQVYAP-KHIQKMIDTTGAQEILLAVPSSSR  239
            +       M PV  +DDD++     IA G++V +  K+I  ++     + I++A+P+ S+
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  240  GRRREILTLLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDPVPAQPDLLEHC  299
             R REI  L EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRDPV  +   +   
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  300  ITGQSVLVTGAGGSIGSELCRQILALKPTTLLLYEHSEFNLYSILSELEPRVIRESLSVR  359
            +T +++LVTGAGGSIGSE+CRQ+  + P  ++L  H+E ++Y I  EL   + +E + V 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV-  336

Query  360  LLPILGSVRDQDKLLDVMKTWNVDTVYHAAAYKHVPMVEHNIAEGVLNNVIGTLNTAQAA  419
             +PI++ V+D++++  VM++ +   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA
Sbjct  337  -IPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  420  LQAGVSNFVLISTDKAVRPTNVMGSTKRLAELTLQALSRELAPVLFGDKGNVSRVNKTRF  479
              A VS+FV++STDKAV P NVMG++KR+AE+ +Q+++ E               +KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNE--------------TSKTDF  441

Query  480  TMVRFGNVLGSSGSVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGLGG  539
              VRFGNVLGS GSVIPLF KQI +GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  540  DVFVLDMGEPVKIIELAEKMIHLSGLSVRSEKNPHGDISIEFTGLRPGEKLYEELLIGDN  599
            ++FVLDMG PVKI++LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  600  VVATQ-HPMIMSANEDHLSWDALKNKLTELL  629
            + + Q    I  ++ + +  + L NK+ ++L
Sbjct  555  IHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

443) MARHY2533 in NC_017067


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  286 bits (1070),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 205/483 (43%), Positives = 328/483 (68%), Gaps = 29/483 (6%)

Query  124  LLVAGTRFTIRSVVRR---PREKAKNSVLIVGAGAKGMQLASALAQGVEYRPVGFVSLLK  180
            LL++G+R++ + + R+   ++E  K++ LIVG+G  G  L   + +   Y  +G  ++L 
Sbjct  117  LLIGGSRLS-WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT-PY--MGMEPVLV  172

Query  181  GNHRSVIGGLPVYSVEHLD---KAVRELDASRALLALEDAIPVNRKQLLASLEKL----S  233
             ++ S    +++ S   ++   K + EL     +  +  AIP   +Q L  ++KL    +
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  234  IPVQTVPSMSELVAGQARINDIRDLEIEDLLGRDPVRPDTAIVSESLYGKSVMVTGAGGS  293
            + V  +P++ ++++G+  +N ++ +E+EDLLGRDPV  D A +S  L  K+++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  294  IGSELCRQIIRHKPRMLVLFEQSEFSLYSIERELRSISQIENLDVTIHAILGSVTHRRRC  353
            IGSE+CRQ+ +  P  ++L+ ++E S+Y I++EL ++ + E+++V   +I++ V ++ R 
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-EEIEVI--PIIADVQDKERM  349

Query  354  EAVLKAFGVQAVYHAAAYKHVPLVEHNVIEGIQNNVFGTWHTAEAAIAAGVERFVLISTD  413
              V++A+    VYHAAA KHVPL+E N  E+I+NNV+GT++TAEAA  A V +FV++STD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  414  KAVRPTNVMGATKRMAELVLQGLSQRQSQTVFSMVRFGNVLGSSGSVVPLFRDQIRDGGP  473
            KAV P NVMGA+KR+AE+V+Q++++  S+T F  VRFGNVLGS GSV+PLF+ QI  GGP
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGP  469

Query  474  VTVTHPDIIRYFMTIPEASQLVLQAGSMGQGGEVYVLDMGEPVRIADLARKMIHLMGLEE  533
            VTVTHP++ RYFMTIPEAS+LVLQAG+++ GGE++VLDMG PV+I DLA+++I+L G  E
Sbjct  470  VTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE  529

Query  534  KTSESPGGDIEIVYTGLRPGEKLFEELLIGDNPQ-GTAHPRILMAREVSLTWDE----VE  588
                    DI I ++G+R+GEKLFEELL  D+ +      +I  ++   +  +E    ++
Sbjct  530  -------EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

Query  589  EYL  591
            ++L
Sbjct  583  DFL  585

444) swp_1595 in NC_011566


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  286 bits (1071),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 210/491 (43%), Positives = 339/491 (70%), Gaps = 36/491 (7%)

Query  87   SAIIIGIVIAATSLVILSYYAEWTIPRTVPIIFSFFAFTFIGGSRF----LIRSVIGNGN  142
            ++II+ I    ++++ L Y+  W +            + +IGGSR+      ++ I++  
Sbjct  91   TGIIVPIFTQQAPFLRL-YFITWMMH-----------LLLIGGSRLSWRIYRKTFISKEG  138

Query  143  KKQGEAVIIYGAGVSGRQLLTSLNQSHEYHAFA---FVDDDESLQG-NIIQGVHVHS-PT  197
            KK+  + +I G+G +G  L+  + ++  Y +      VDDD + Q  +I  GV V++   
Sbjct  139  KKK--PTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIK  195

Query  198  IIRKLIKQKSATKVLLALPSASRSQRQSILKKL-EPLAVQILTIPGMSDLVCGKKQYSDI  256
             I  L+K+ +  K+++A+P+ S+ QR   ++KL E   V+++ +P + +++ G  + + +
Sbjct  196  DIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKL  254

Query  257  KEVEIDDLLGREAVPPRHELMCSNITNKVVMVTGAGGSIGSEICRqvlklkpqklvlFEL  316
            K VE++DLLGR++V      +  ++T+K ++VTGAGGSIGSEICRQV K+ P++++L+  
Sbjct  255  KKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGH  314

Query  317  SEFGLYSIDRELSALALSLDIELEVLPLIGSVQKQNRVQAIMESFGVQTVYHAAAYKHVP  376
            +E ++Y I++EL +L      E+EV+P+I+ VQ ++R++ +M+++    VYHAAA KHVP
Sbjct  315  GENSIYHIHQELIGL---YKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVP  371

Query  377  LVEYNVVEGVRNNIFGTLYTAKAAIAAHVETFVLISTDKAVRPTNVMGTTKRMAELALQA  436
            L+EYN  E+++NN++GT  TA AA  A+V  FV++STDKAV P NVMG++KR+AE+ +Q+
Sbjct  372  LMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQS  431

Query  437  LAKESHRTRFCMVRFGNVLGSSGSVVPLFKSQIAKNGPVTVTHPDITRFFMTIPEASQLV  496
            + +E+ +T F  VRFGNVLGS GSV+PLFK QI   GPVTVTHP++TR+FMTIPEAS+LV
Sbjct  432  MNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLV  491

Query  497  IQAGAMGKGGDVFVLDMGKPIKIVDLAVKMIHLSGFTVKDDQNPDGDIEVSYAGLRPGEK  556
            +QAGA++ GG++FVLDMGKP+KIVDLA ++I+LSG+        + DI + ++G+R+GEK
Sbjct  492  LQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEK  544

Query  557  LYEELLIGDDV  567
            L+EELL  D++
Sbjct  545  LFEELLNKDEI  555

445) PputGB1_1379 in NC_010322


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1068),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 218/531 (42%), Positives = 348/531 (66%), Gaps = 41/531 (7%)

Query  80   FGLYRAVMRYFGNDALIAIIKAVTLSALILGFIIYWASNHQNVVPRSITFNYWWLSLIMI  139
            F+LY+    Y +   LI I+K+VT S +  G+I+     +Q    R + F  W + L++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLR-LYFITWMMHLLLI  119

Query  140  GGLRLAMRQYFLGDWFAAAAQHVPFAQRDDGLPKVAIYGAGAAGNQLVAALRMDR--AMR  197
            GG RL+ R Y           +  F  +++      I G+G +G+ L+  +      +M 
Sbjct  120  GGSRLSWRIY-----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  198  PVAFIDDDASISD-RVIAGLQVYRP-EQLDQMINVTGAQEILLAIPSSTRTRRREILNFL  255
            PV  +DDD++     + +G++V     ++ ++++    + I++AIP+ ++ R REI ++ 
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  256  EGFPLHVRSVPGIMDLASGRVKVDDIQEVDIGDLLGRDTVPAQPDLLERCITEQTVLVTG  315
            EG  ++V  +P I ++ SG + V+ ++ V++ DLLGRD V  +   + + +T++T+LVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  316  AGGSIGSELCRQILGQAPKYLLLFDHSEFNLYSILSELEQRVSRESLTVSLVPILGSVRN  375
            AGGSIGSE+CRQ+   +P  ++L++H+E ++Y I  EL   + +E + V  +PI++ V++
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV--IPIIADVQD  345

Query  376  QSQLLDIMKTWRVDTVYHAAAYKHVPMVEHNITEGLMNNVIGTLHTAQAALQAGVANFVL  435
            + ++  +M++ +   VYHAAA KHVP++E N  E++ NNV+GT +TA+AA  A V++FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  436  ISTDKAVRPTNVMGSTKRLAEMTLQALSREVAPVLFGDSGKVSQVNKTRFTMVRFGNVLG  495
            +STDKAV P NVMG++KR+AEM +Q+++ E +              KT F  VRFGNVLG
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLG  451

Query  496  SSGSVIPLFHKQIKAGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGKGGDVFVLDMGEP  555
            S GSVIPLF KQI AGGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG P
Sbjct  452  SRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKP  511

Query  556  VKIVELAEKMIHLSGFSVRSERNPMGDISIQFTGLRPGEKLYEELLIGDNV  606
            VKIV+LA ++I+LSG+          DI+I+F+G+R+GEKL+EELL  D++
Sbjct  512  VKIVDLAKNLIRLSGYKE-------EDIGIEFSGIRSGEKLFEELLNKDEI  555

446) ERH_1448 in NC_015601


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1067),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 224/507 (45%), Positives = 336/507 (67%), Gaps = 12/507 (2%)

Query  59   IFYKIFSLDKMIWRKISVHETIRIGLANIMAFLSCMVIIIIRNDELIGTRAMIVITGLNV  118
            +F +IF L    W   SV E I I  +   ++++  +I+ I  ++    R  ++   +++
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHL  116

Query  119  LLQLAVRFVVRYYYDKKERVAVKGKKLQSILIYGAGSAGQMILNEISRNNEYGYKVIGFI  178
            LL  + R+  R Y  +K  ++  GKK ++ LI G+G +G +++ ++      G   +  +
Sbjct  117  LLIGGSRLSWRIY--RKTFISKEGKK-KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  179  DDNPN-LKNSIIYSVPVLGSIDDIEKVVKKYAVECVFVAMPSQPLNTQKEIINKLVK-IG  236
            DD++N  K SI  +V V G I DI  +VKK+ +  +++A+P+ + +  +EI NKL     
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREI-NKLCEGTN  232

Query  237  VDVKTVESAQKLIQNKNLKNSLRKIEISDLLNRPEIIIDDVEIFRNLDSQRVLITGAGGS  296
            V+V  + + ++++      N L+K+E+ DLL R  + +D   I ++L  + +L+TGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  297  IGSELVRQVVKYSPMSLTLVDINENGLYDIQQELRIMEREGVIPKIKVSAIITSVRDQSS  356
            IGSE+ RQV K++P  + L++  EN++Y+I+QEL  + +E     I V +II+ V+D+  
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE----IEVIPIIADVQDKER  348

Query  357  LEKVFESAKPTIVFHAAAHKHVPLMEDAPEEAIKNNIFGTFNIIQTSIKYKVEKVINIST  416
            + KV ++ KP +V+HAAAHKHVPLME  P+EAIKNN++GT N  +++    V K + +ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  417  DKAVNPTNIMGATKRFNEMMLQAFDK-CSSTKFVAVRFGNVLGSNGSVVPLFRKQIEQGG  475
            DKAVNP N+MGA+KR  EM++Q+ ++  S T FVAVRFGNVLGS GSV+PLF+KQIE GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  476  PVTVTHPEIIRYFMTIPEAVSLVLQAATYADGGEIFVLDMGEPVKILSLAEKVIELSGYV  535
            PVTVTHP + RYFMTIPEA  LVLQA++ A GGEIFVLDMG PVKI+ LA ++I LSGY 
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  536  PYKDIEIKFTGLRPGEKLYEELLMAEE  562
               DI I F+G+R+GEKL+EELL  +E
Sbjct  529  E-EDIGIEFSGIRSGEKLFEELLNKDE  554

447) MEALZ_0067 in NC_016112


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1068),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 205/491 (42%), Positives = 328/491 (67%), Gaps = 29/491 (5%)

Query  130  LNWLIMLLFAGGSRYMARWWFGEQYARMARSADPELCGRKNVIIYGAGSAGVQLSSALAQ  189
            + W++ LL+ GGSR    W++   Y +   S +     +K  +I G+G +G  L   + +
Sbjct  110  ITWMMHLLLIGGSR--LSWRI---YRKTFISKEGK---KKPTLIVGGGRGGSLLIRQMMN  161

Query  190  GH--DFRPIAFIDDNALLHGQKV-NGVKIHP-FTALSYLIDKFAVTDILLAMPSVARSRR  245
                +  P+  +DD++  +   + +GVK++  +  ++ L+ KF +  I++A+P++++ R 
Sbjct  162  TPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRL  221

Query  246  SEIIRLLEPFPVHVRSMPGMSDIAQGKVTFDELQEVDIADLLGRDAVDPDQALLTANTAG  305
             EI +L E   V+V  MP + ++  G +  + L+ V++ DLLGRD+V+ D A ++ + + 
Sbjct  222  REINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTH  281

Query  306  KKVMVTGAGGSIGSELCRQIIQLQPKVLILYEQCEFALYEIEREL-NLYLAKSDVVDTQI  364
            K ++VTGAGGSIGSE+CRQ+ ++ P  ++L  + E ++Y+I++EL  LY  K ++   ++
Sbjct  282  KTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLY--KEEI---EV  336

Query  365  IAVLGSVVNGSRVEKICRAFGVQTIYHAAAYKHVPMVEKNPGEAVRNNIFGTLHTARAAI  424
            I++++ V +  R+ K+ +A+    +YHAAA KHVP++E NP EA++NN++GT +TA AA 
Sbjct  337  IPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAK  396

Query  425  NANVETFVLISTDKAVRPTNTMGATKRFAELILQALSIENQNPRATRFTMVRFGNVLGSS  484
             A+V  FV++STDKAV P N MGA+KR AE+++Q++   N++   T F  VRFGNVLGS 
Sbjct  397  LAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSM---NNETSKTDFVAVRFGNVLGSR  453

Query  485  GSVVPLFREQIAKGGPVTVTDPKIIRYFMTIPEAAQLVIQAGAMGQGGDVFVLDMGEPVK  544
            GSV+PLF+ QI  GGPVTVT+P + RYFMTIPEA++LV+QAGA++ GG++FVLDMG PVK
Sbjct  454  GSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVK  513

Query  545  ILDLAKRMIKLSGLTVKGDARPDGDIEIVFTGLRSGEKLYEELLIGDNVSVTD-HPRIMR  603
            I+DLAK +I+LSG         + DI I F+G+RSGEKL+EELL  D++   +   +I R
Sbjct  514  IVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYR  566

Query  604  AEEEVIALNEL  614
            +  + I  +EL
Sbjct  567  GKVQKIEKEEL  577

448) Sfum_3360 in NC_008554


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1068),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 212/512 (42%), Positives = 353/512 (69%), Gaps = 24/512 (4%)

Query  62   LFGLYRGMWRFSGLEDFWRLGQASVLSMLLIVATVAYTDNFTGYPRSVFLLDCVLTFLLT  121
            +F+LY+  W ++++ ++  + ++   S++     V+   + + + R ++++  ++ +LL 
Sbjct  61   IFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLI  119

Query  122  GGLRVCIRSYYIARNTPRGIRAFSLPRLNYVEKE--RKQILIIGAGGSGEKMLREIFDNP  179
            GG R+  R Y                R  ++ KE  +K  LI+G+G +G  ++R++ + P
Sbjct  120  GGSRLSWRIY----------------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP  163

Query  180  QLHYHVVGFLDDDPGKRGRTV-HGVRVLGPADHLSRVLEQNNIEQVFISVPSATGAQMRR  238
             +  + V  +DDD+ K+  ++  GV+V G   +++ ++ + NI +++I++P+ +  ++R 
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  239  LIDICKGCGISYKTLPAIGSIMNGNVSIKSLRDVNYEDLLRRPPVSLETDAISGYLTNRT  298
            +  +C G  +    +P I ++M+G++ ++ L+ V+ EDLL R PV L+  +IS  LT++T
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  299  VMVTGAGGSIGSELCRQVAQFKPQLLILVDASESNLFHMQMELQHE-REFRNYQCILGQV  357
            ++VTGAGGSIGSE+CRQV +F P+ ++L++ +E++++H++ EL    +E  +   I+++V
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADV  343

Query  358  QQRLLMESVFRKYRPDVVFHAAAYKHVPMLERNPWEAVFNNVRGSQVMMKLSKDYGVKRF  417
            Q++  M  V + Y+P VV+HAAA KHVP++E NP EA+ NNV G++     +K   V +F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  418  VLVSTDKAVRPTNVMGTSKRLTELILQSFQGNGTK--YMAVRFGNVVGSSGSVIPLFRRQ  475
            V+VSTDKAV P NVMG+SKR++E+++QS + + +K  ++AVRFGNV+GS GSVIPLF++Q
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  476  IEQGGPVTVTHPEVTRYFMTIPeaaqlilqagalgeggeiFILEMGTPVKIADMAQDLIR  535
            IE GGPVTVTHP +TRYFMTIPEA++L+LQAGAL+ GGEIF+L+MG PVKI D+A++LIR
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  536  LSGKQPGRDIEIQFTGLREGEKLYEELITLDE  567
            LSG +   DI I+F+G+R GEKL+EEL+  DE
Sbjct  524  LSGYKEE-DIGIEFSGIRSGEKLFEELLNKDE  554

449) SULAZ_0357 in NC_012438


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1066),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 213/445 (48%), Positives = 311/445 (70%), Gaps = 14/445 (3%)

Query  150  INKSGKR--TLIVGAGSTGERIVRGLIKDP--NYNPVGFVDDDPNKLGTTI-HGVPVLNS  204
            I+K GK+  TLIVG+G  G  ++R +++ P    +PV  VDDD+NK   +I  GV V   
Sbjct  134  ISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGC  193

Query  205  LDNIQDVIKENRIESVILAIPSLNHREIKRLYNFIKEQGINDIKIVPSLKNLPNNIELSV  264
            + +I +++K   I  +I+AIP+L+++ ++ + ++     ++ +K+ P++ N+ +  E+ V
Sbjct  194  IKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM-PNIENVMSG-EIEV  251

Query  265  KTLKDISIEDLLFREEINIDKDKVTKFLkgkkifisgaggsigsEIVRQVIDFNPCMIIA  324
            + LK + +EDLL R+ +++D   ++K L  K I+++GAGGSIGSEI RQV  F P  I+ 
Sbjct  252  NKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIML  311

Query  325  FEIDETELYNLTLEVLDKCKGYGIEFIPIVGDIRNKDKLDNIFKKYAPKIVFHAAAYKHV  384
            +  +E  +Y++  E+++  K   IE IPI++D+++K+++ ++ + Y P +V+HAAA KHV
Sbjct  312  LGHGENSIYHIHQELIGLYKE-EIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  385  PLMEYFPEEAVKTNVFGTYNLADVSVKYKVEKFVNISTDKAVNPTSIMGATKRLAEIICN  444
            PLMEY P+EA+K NV+GT N A+ +    V KFV +STDKAVNP ++MGA+KR+AE++ +
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  445  SFN-QVNITKFISVRFGNVLGSRGSVIPIFLEQIKKGGPVTVTHPEMQRYFMTIPEAVLL  503
            S N + + T F++VRFGNVLGSRGSVIP+F  QI  GGPVTVTHP M RYFMTIPEA  L
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  504  VLQAAAMGEGGEIFVLDMGEPIKIVKLAEELIRLQNLEPYK--DIEIVFSGLRPGEKLFE  561
            VLQA+A++ GGEIFVLDMG P+KIV LA +LIRL     YK  DI I FSG+R+GEKLFE
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG---YKEEDIGIEFSGIRSGEKLFE  547

Query  562  ELLTAEEGTDKTYHEKIYIAKNPKF  586
            ELL  +E       EKIY +K  K+
Sbjct  548  ELLNKDEIHPEQVYEKIYRGKVQKI  572

450) VF_0197 in NC_006840


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1066),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 202/454 (45%), Positives = 316/454 (70%), Gaps = 20/454 (4%)

Query  122  VMLCGGSRLIVRVLVSDLLGKQ--KKKVLIYGAGSAG-LQLANMLRQG-KEFHPIAFIDD  177
            ++L GGSRL  R+    +++K+  KK  LI G+G +G L + +M+       +P+  +DD
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  178  DRKKHKTTMQGITIYRP--KYLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEV  235
            D +K+K ++ +    +   K +  L+KK  I  +++A+P+ SQ + + I       +VEV
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  236  LTIPNLDDLVNGKLSIGQLKEVSIDDLLGRVAVTPQAELMEANIKDKVVMVTGAGGSIGS  295
            + +PN++++++G + + +LK V ++DLLGR +V  +   +  ++ +K ++VTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  296  ELCRQIILNKPTTLVLFELSEFSLYQIEHELSQIIANQQLSINVVPLLGSVQRLNRLAAT  355
            E+CRQ+    P  ++L+  +E S+Y+I++EL  +  ++   I+V+P+++ VQ  +R+   
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDKERMKKV  352

Query  356  MKAFKVQTVYHAAAYKHVPLVEYNVVEGVRNNIFGTNYAAQAAIEAKVESFVLISTDKAV  415
            M+A+K   VYHAAA KHVPL+EYN  E+++NN++GT  +A+AA  A V  FV++STDKAV
Sbjct  353  MQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAV  412

Query  416  RPTNVMGTTKRVAELGLQALAQVENAKPNGTRFCMVRFGNVLGSSGSVIPLFKKQIAQGG  475
             P NVMG++KRVAE+ +Q++ + E +K +   F  VRFGNVLGS GSVIPLFKKQI  GG
Sbjct  413  NPPNVMGASKRVAEMVIQSMNN-ETSKTD---FVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  476  PITLTHKDITRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKIADLARNLIHLSGLE  535
            P+T+TH ++TRYFMTIPEA++LV+QAGA++ GG++FVLDMG +VKI DLA+NLI+LSG  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  536  VRSDENPDGDIEIRCTGLRPGEKLYEELLIGDNV  569
                   + DI I  +G+R+GEKL+EELL  D++
Sbjct  529  -------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

451) wbfY in NC_015964


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1066),  Expect = 8e-78, Method: Compositional matrix adjust.
 Identities = 210/453 (47%), Positives = 317/453 (70%), Gaps = 21/453 (4%)

Query  120  FLLCGSARMLVRYYVSLILDKD--NESVLIYGAGTTGRQLA-VLLKHAYRYRIRGFI--D  174
            +LL G++R+  R Y   ++ K+  + + LI G+G  G  L   +++ +Y      ++  D
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  175  DNAKLHGSYLLGNKIFS-PNDIPKLVQKYNIKVILLAIPSASRSERKTIIDSL-IPLKIK  232
            D+ K   S   G K+ +  +DIP LV+K+NIK I++AIP+ S+ +R   I+ L    ++ 
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEGTNVE  234

Query  233  VQTIPDMEEILQGNAKIDELREVNIEDLLGREPVLPNKDLLQKNILHKVVMVTGAGGSIG  292
            V  +P++E+++ G+  ++ L+ V++EDLLGR+PV  +   + K++ HK ++VTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  293  SELCRQIILNEPNILILFEVSEFSLYSIHQELLEIAKKNNVVNTKIYPVLGNVQDIERLD  352
            SE+CRQ+    P+ ++L+  +E S+Y IHQEL+ + K +      + P++++VQD ER+ 
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE----IEVIPIIADVQDKERMK  350

Query  353  RVLSHFSVDTIYHAAAYKHVPLVEYNMIEGVQNNVFGTYNVARCAAEHGVKSFVLISTDK  412
            +V+  +    +YHAAA KHVPL+EYN  E+++NNV+GT N A  A    V  FV++STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  413  AVRPTNVMGASKRMAELCLQALSEQLKDYQTCFSMVRFGNVLGSSGSVIPLFRKQILKGG  472
            AV P NVMGASKR+AE+ +Q+++++    +T F  VRFGNVLGS GSVIPLF+KQI  GG
Sbjct  411  AVNPPNVMGASKRVAEMVIQSMNNETS--KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  473  PITITHPDIIRYFMTIPEAAQLVIQAGAMAKGGDVFILDMGEPVKIVDLAKNLIQLSGLS  532
            P+T+THP++ RYFMTIPEA++LV+QAGA+A GG++F+LDMG PVKIVDLAKNLI+LSG  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-  527

Query  533  VKDENNPKGDIEITYTGLRPGEKLYEELLIGGD  565
             K+E     DI I ++G+R+GEKL+EELL  ++
Sbjct  528  -KEE-----DIGIEFSGIRSGEKLFEELLNKDE  554

452) CIY_26710 in NC_021031


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  285 bits (1065),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 207/480 (44%), Positives = 317/480 (67%), Gaps = 36/480 (7%)

Query  151  NNVLLIGAGSAGRMILRDVNFVNGNKKTGTKIVSIIDDNSNKWGRYI-DGVEVIGGRDKI  209
            +  L++G+G +G +++R++         G   V ++DD+SNK    I  GV V G    I
Sbjct  141  KPTLIVGGGRGGSLLIRQMM---NTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  210  LYAVEKFEISEIYIAIANITPSDKRNLINICKETDCKIKQLPNMYAEKAGVISAGSLQNI  269
               V KF+I  I IAI+ ++    R++ ++C  T+  + ++PN+    +G I    L+++
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  270  TIEDVLGRDPISLHQEDVAAQLKDKVVLVTGGGGSIGSELCRQIAKYQPKQLIIFDVYEN  329
             +ED+LGRDP+ L+   ++ +L +K +LVTG+GGSIGSE+CRQ+ K+ P ++++++  EN
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  330  NAYDIQLELKRRY-PQLDLVTLIGSVRDARRINSVFETYRPNICYHAAAHKHVPLMEDSP  388
            + Y+I+ EL   Y  +++++ +I+ V+D  R++ V ++Y+P + YHAAAHKHVPLME +P
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  389  CEAIKNNAVGTYKTAYAAMKYSCDRFVLISTDKAVNPTNVMGATKRICEMIIQTFDKAVR  448
             EAIKNN +GT +TA AA      +FV++STDKAVNP NVMGA+KR+ EM+IQ+ ++   
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNE--  435

Query  449  NNMEDQLPVLLSHQLEVNMDAAEKVSAGSGHTEYVAVRFGNVLGSNGSVVPLFKKQIAEG  508
                                        ++ T++VAVRFGNVLGS GSV+PLFKKQI  G
Sbjct  436  ----------------------------TSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  509  GPVTLTHKDIIRYFMTIPEAVSLVLKAGANASGGEIFVLDMGEPVKILDLARNMIELAGL  568
            GPVT+TH ++ RYFMTIPEA  LVL+AGA A+GGEIFVLDMG PVKI+DLA+N+I L+G 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  569  RPDIDIEIEYIGLRPGEKLYEEKLMSEEGLKETENHLIHVAEPIKFDSEEFLNNLGTLMV  628
            + + DI IE+ G+R+GEKL+EE L  +E   E   + I  +   K++ EE+ N+++ +++
Sbjct  528  KEE-DIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLI  586

453) VFMJ11_0189 in NC_011184


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  284 bits (1062),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 206/455 (46%), Positives = 319/455 (71%), Gaps = 22/455 (4%)

Query  122  VMLCGGSRLIVRVLVSDLLGKQ--KKKVLIYGAGSAG-LQLANMLRQG-KEFHPVAFIDD  177
            ++L GGSRL  R+    +++K+  KK  LI G+G +G L + +M+       +PV  +DD
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  178  DRKKHKTTMQGITIYRP--KYLERLIKKYCISTVLLAVPSASQVQKKIVIESL-AKLHVE  234
            D +K+K ++ +    +   K +  L+KK+ I  +++A+P+ SQ Q+   I+ L    +VE
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEGTNVE  234

Query  235  VLTIPNLDDLVNGKLSIGQLKEVSIDDLLGRVAVTPQAELMEANIKDKVVMVTGAGGSIG  294
            V+ +PN++++++G + + +LK V ++DLLGR +V  +   +  ++ +K ++VTGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  295  SELCRQIILNKPSTLVLFELSEFSLYQIEHELSQIIINEQLSINVVPLLGSVQRLNRLAA  354
            SE+CRQ+    P  ++L+  +E S+Y+I++EL  +  +E   I+V+P+++ VQ  +R+  
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDKERMKK  351

Query  355  TMKAFKVQTVYHAAAYKHVPLVEYNVVEGVRNNIFGTNYTAQAAIEAKVESFVLISTDKA  414
             M+A+K   VYHAAA KHVPL+EYN  E+++NN++GT  TA+AA  A V  FV++STDKA
Sbjct  352  VMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKA  411

Query  415  VRPTNVMGTTKRMAELGLQALAQVENAKPNGTRFCMVRFGNVLGSSGSVIPLFKKQIAQG  474
            V P NVMG++KR+AE+ +Q++ + E +K +   F  VRFGNVLGS GSVIPLFKKQI  G
Sbjct  412  VNPPNVMGASKRVAEMVIQSMNN-ETSKTD---FVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  475  GPITLTHKDITRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKIADLARNLIHLSGL  534
            GP+T+TH ++TRYFMTIPEA++LV+QAGA++ GG++FVLDMG +VKI DLA+NLI+LSG 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  535  EVRSDENPDGDIEIRCTGLRPGEKLYEELLIGDNV  569
                    + DI I  +G+R+GEKL+EELL  D++
Sbjct  528  K-------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

454) ACIAD0096 in NC_005966


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  284 bits (1064),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 202/469 (44%), Positives = 324/469 (70%), Gaps = 24/469 (5%)

Query  110  LRLAFVP-MSIPIIFASLLFAWVWCSRAFIRIVINNTLYSHTEKTRVAIYGAGNAGQQMA  168
            LRL F+  M   +++++  ++W    ++FI          +  K    I G+G +G  + 
Sbjct  105  LRLYFITWMMHLLLIGGSRLSWRIYRKTFIS--------KEGKKKPTLIVGGGRGGSLLI  156

Query  169  LALERSP--NHIPVLFLDDHVGLQG-QMVQGLKVYSP-RQLNELKQRFHLHEILLAIPSI  224
              +  +P     PVL +DD+   Q   +  G+KV +  +++ EL ++F++  I++AIP++
Sbjct  157  RQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTL  216

Query  225  GRQRKMQVIQQLESLALKVREIPSVEQIIDGQLHVSDIREVDIETLLGREPVPPNVELLD  284
            ++QR  ++ +  E+  + V  +P++E+++ G+++V+ ++ V++E LLGR+PV  ++  + 
Sbjct  217  SQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASIS  276

Query  285  KNIRDKVVLVTGAGGSIGSELCRQILQRQPKLLILFEQSEFSLYSIHQELQ---QRHQAL  341
            K++ +K +LVTGAGGSIGSE+CRQ+ +  P  ++L+ ++E S+Y IHQEL    + +  +
Sbjct  277  KELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEV  336

Query  342  IPILGSVFNEKKLTRIMQQYQVQTVYHAAAYKHVPLVEANPIEGLRNNSVGTAKSLNAAV  401
            IPI++ V +  ++ ++MQ Y+   VYHAAA KHVPL+E NP E+++NN +GT ++ +AA 
Sbjct  337  IPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAK  396

Query  402  TAGVETFVLISTDKAVRPTNVMGASKRLAELYCQAVAASQPKTKISIVRFGNVLGSSGSV  461
             A V  FV++STDKAV P NVMGASKR+AE+  Q++    +KT +  VRFGNVLGS GSV
Sbjct  397  LAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSV  456

Query  462  VPLFKKQIAAGGPITVTHPDVTRYFMTIPEAALLVIQAGAMGEGGDVFLLDMGESVKIRD  521
            +PLFKKQI AGGP+TVTHP++TRYFMTIPEA+ LV+QAGA++ GG++F+LDMG +VKI D
Sbjct  457  IPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVD  516

Query  522  LALQMIALSGLKLKEGAEDEGDIEIHYTGLRPGEKLYEELLIEQSNVQP  570
            LA ++I LSG K       E DI I+++G+R+GEKL+EELL ++ +++P
Sbjct  517  LAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELL-NKDEIHP  557

455) PBPRA2698 in NC_006370


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  284 bits (1064),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 196/459 (43%), Positives = 316/459 (69%), Gaps = 22/459 (4%)

Query  120  LAVILLGSPRILIRMY---FDRHYRRGKPNVLIYGGGATGRELAYALKQGSEY---HPVA  173
            + ++L+G++R+  R+Y   F     + KP +++  GG+ G  L       + Y   +PV 
Sbjct  114  MHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIV--GGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  174  FIDDDKHKVG-NIIYGLRVYDSTK-FEQLNGLYQPVKLLLAINNISKGERLRLVDKLSH-  230
             +DDD +K   +I  G++V +  K + +L   ++  K+++AI  +S+ +RLR ++KL + 
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEG  230

Query  231  WPIGIKSVPSVEDVALGRANLTEIKDLDIADLLGRDTVIPQENLMRNAIENKSVMITGAG  290
              + +  +P++E+V  G  ++  +K +++ DLLGRD V  +   + + + +K++++TGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  291  GSIGSELCRQIISRNPTTIVLFELNEYNLYNIEKELLQIVRFKNLKIRIIAALGSVQNKN  350
            GSIGSE+CRQ+    P  I+L+   E ++Y+I++EL+ +  +K+  I +I+ ++ VQ+K+
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL--YKE-EIEVIPIIADVQDKE  347

Query  351  RVESIMTSYKVSTIYHAAAYKHVPIVEHNMIEGIRNNVFGTLFTAQAAIKAGVENFVLIS  410
            R+  +M +YK   +YHAAA KHVP++E N  E+I+NNV+GT  TA+AA  A V +FV++S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  411  TDKAVRPTNIMGASKRMAELVLQSLAEDQTKTNFTMVRFGNVLGSSGSVVPLFREQIKQG  470
            TDKAV P N+MGASKR+AE+V+QS+ ++ +KT+F  VRFGNVLGS GSV+PLF+ QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  471  GPVTVTHPDIIRYFMLIPEAAQLVIQAGSIGNNGQVFVLDMGEPVKILDLAKRMVHLMGM  530
            GPVTVTHP++ RYFM IPEA++LV+QAG+++  G++FVLDMG PVKI+DLAK +++L G 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG-  526

Query  531  SEKCSENTEGDIEIKFTGLRPGEKLYEELLIGENVTGTE  569
                    E DI I F+G+R+GEKL+EELL  +++   +
Sbjct  527  ------YKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

456) XNC1_0138 in NC_014228


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  284 bits (1062),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 202/489 (42%), Positives = 341/489 (70%), Gaps = 27/489 (5%)

Query  7    AIIGSFLSTLILIAFSLYQQAFLPRTVPIIYF-SFLV--ILLCGTRFFYRTLRNYTMSRG  63
            ++ +S+++T I++++   Q +FL      +YF + ++  +L+ G+R+  R  R+  +S+ 
Sbjct  83   SVTSSIVATGIIVPIFTQQAPFLR-----LYFITWMMHLLLIGGSRLSWRIYRKTFISKE  137

Query  64   ---IPVIIYGAGESGRQLLPILREHR--EFEPVAFIDDNSKLKNLSI-HGVTVYSP-NSI  116
                P +I G+G +G  L+  + +      EPV  +DD+S+ +++SI  GV V +  + I
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  117  IDLIEKYNVKKILLSIPSASISERRYIIEKL-QPTHCEILTIPNFNELVDGSAQIDTLRR  175
             +L+ K+N+KKI+++IP+ S  +R   I+KL + T+ E++ +PN+++++ G  +++ L++
Sbjct  198  PELVKKFNIKKIIIAIPTLS-QQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKK  256

Query  176  VSVDDLLGREQVSPLPELLSKNILNKNVLVSGAGGSIGSELCRQIIQQKPNSLVLLELTE  235
            V V+DLLGR+ V      +SK++ +K +LV+GAGGSIGSE+CRQ+ +  P+ ++LL   E
Sbjct  257  VEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGE  316

Query  236  YALYSIERELQKINRDKKLNVNIIPILGDIKNSEKIDKILSKFHINTIYHAAAYKHVPLV  295
             ++Y I++EL  + ++   ++++IPI++D+++ E++ K++  +    +YHAAA KHVPL+
Sbjct  317  NSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLM  373

Query  296  ELNTIEGIQNNIFGTLAIAQAALNQKVDKFVLISTDKAVRPTNIMGATKRFAELILQALA  355
            E N  E+I+NN++GT   A+AA    V KFV++STDKAV P N+MGA+KR AE+++Q++ 
Sbjct  374  EYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMN  433

Query  356  RQNKHTQFSMVRFGNVLGSSGSVVPLFEKQIANGGPITLTHKDITRYFMTIPEAAQLVIQ  415
             +   T+F  VRFGNVLGS GSV+PLF KQI  GGP+T+TH ++TRYFMTIPEA++LV+Q
Sbjct  434  NETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQ  493

Query  416  AGAMGVNGDVFVLDMGESVRIYDLATKMIHLSGLTIKNENNLHGDIEIKVTGLRPGEKLY  475
            AGA++  G++FVLDMG +V+I DLA ++I+LSG         + DI I  +G+R+GEKL+
Sbjct  494  AGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLF  546

Query  476  EELLIGNNV  484
            EELL  +++
Sbjct  547  EELLNKDEI  555

457) PSEBR_a1575 in NC_015379


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  284 bits (1062),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 209/485 (44%), Positives = 321/485 (67%), Gaps = 38/485 (7%)

Query  119  FNYWWLSLIMIGGLRLMMRQYFLGDWFTAAQHVPFTNRDDGLPKVAIYGAGAAGNQLVAA  178
            F  W + L++IGG RL  R Y          +  F ++++      I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  179  LRMGR--VMRPVAFIDDDNSIADRVIA-GLQVYEP-RHIQKMIDTTGAQEILLAVPSSSR  234
            +       M PV  +DDD++     IA G++V    ++I  ++     + I++A+P+ S+
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  235  GRRREILTLLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDPVPAQPDLLEHC  294
             R REI  L EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRDPV  +   +   
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  295  ITDQSVLVTGAGGSIGSELCRQILALKPTTLLLYEHSEFNLYSILSELEPRILRESLSVR  354
            +T++++LVTGAGGSIGSE+CRQ+  + P  ++L  H+E ++Y I  EL   + +E + V 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV-  336

Query  355  LLPILGSVRDQDKLLDVMRTWNVDTVYHAAAYKHVPMVEHNIAEGVLNNVIGTLNTAQAA  414
             +PI++ V+D++++  VM++ +   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA
Sbjct  337  -IPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  415  LQAGVSNFVLISTDKAVRPTNVMGSTKRLAELTLQALSRELAPVLFGDKDNVSRVNKTRF  474
              A VS+FV++STDKAV P NVMG++KR+AE+ +Q+++ E               +KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNE--------------TSKTDF  441

Query  475  TMVRFGNVLGSSGSVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGLGG  534
              VRFGNVLGS GSVIPLF KQI +GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  535  DVFVLDMGEPVRIVELAEKMIHLSGLSVRSEKNPHGDISIEFTGLRPGEKLYEELLIGDN  594
            ++FVLDMG PV+IV+LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  595  VVATQ  599
            + + Q
Sbjct  555  IHPEQ  559

458) B479_06985 in NC_019905


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  284 bits (1062),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 221/536 (42%), Positives = 346/536 (65%), Gaps = 51/536 (9%)

Query  70   FGLYRAVMRYFGNDALIAIIKAVTLSALILGFIIYWASNHQNVVPRSITFNYWWLSLILV  129
            F+LY+    Y +   LI I+K+VT S +  G+I+     +Q    R + F  W + L+L+
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIV-PIFTQQAPFLR-LYFITWMMHLLLI  119

Query  130  GGLRLAMRQYFLGDWFTAAVQHVPFASRDDGLPKVAIYGAGTAGNQLVAALRMD--KVMR  187
            GG RL+        W    + +  F S+++      I G+G +G+ L+  +       M 
Sbjct  120  GGSRLS--------W---RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  188  PVAFIDDDSSLTDRVIA-GLQVYHPEQLQCLIDVTG------AQEILLAIPSSTRTRRRE  240
            PV  +DDDS+     IA G++V       C+ D+         + I++AIP+ ++ R RE
Sbjct  169  PVLVVDDDSNKQKMSIASGVKV-----QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  241  ILNFLEGFPLHVRTVPGFMDLASGRVTVDDIREVDIADLLGRDAVPAQSDLLERCIVEQT  300
            I ++ EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  +   + + + ++T
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  301  VMVTGAGGSIGSELCRQILGQAPKTLLLFEHSEFNLYSILSELEQRIARESLSVCLVPIL  360
            ++VTGAGGSIGSE+CRQ+   +P  ++L+ H+E ++Y I  EL   + +E + V  +PI+
Sbjct  284  ILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV--IPII  340

Query  361  GSVRNQPQLFDIMKTWRVDTVYHAAAYKHVPMVEHNIAEGLMNNVIGTLHTAQAALQAGV  420
            + V+++ ++  +M++ +   VYHAAA KHVP++E N  E++ NNV+GT +TA+AA  A V
Sbjct  341  ADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEV  400

Query  421  ANFVLISTDKAVRPTNVMGSTKRLAEMTLQALSREMAPVLFGDSSNVSQVNKTRFTMVRF  480
            ++FV++STDKAV P NVMG++KR+AEM +Q+++              ++ +KT F  VRF
Sbjct  401  SKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMN--------------NETSKTDFVAVRF  446

Query  481  GNVLGSSGSVIPLFHKQIKAGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGKGGDVFVL  540
            GNVLGS GSVIPLF KQI AGGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVL
Sbjct  447  GNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVL  506

Query  541  DMGEPVKIVELAEKMIHLSGFSVRSERNPMGDIAIEFSGLRPGEKLYEELLIGDNV  596
            DMG PVKIV+LA ++I+LSG+          DI+IEFSG+R+GEKL+EELL  D++
Sbjct  507  DMGKPVKIVDLAKNLIRLSGYKE-------EDIGIEFSGIRSGEKLFEELLNKDEI  555

459) PSEBR_a1571 in NC_015379


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  284 bits (1064),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 208/485 (43%), Positives = 326/485 (68%), Gaps = 38/485 (7%)

Query  119  FNYWWLSLVMIGGLRLFMRQYFMGDWFIPSRHAPFINRNASLTKVAIYGAGAAGNQLVAA  178
            F  W + L++IGG RL         W I  +   FI++++      I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRL--------SWRIYRK--TFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  179  LRIGR--DMQPVAFIDDDASIANRMI-SGLQVFKA-KHIQKMIRLTGAQEVLLAVPSASR  234
            +      +M+PV  +DDD++  +  I SG++V    K+I  +++    + +++A+P+ S+
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  235  ARRREILGYLEGYPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQPELLSRC  294
             R REI    EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  +   +S+ 
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  295  IRGKVVLVTGAGGSIGSELCRQILALQPSTLLLFDHSEFNLYSILSELEETIVRQSIAVN  354
            +  K +LVTGAGGSIGSE+CRQ+  + P  ++L++H+E ++Y I  EL   + ++ I V 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELI-GLYKEEIEV-  336

Query  355  LLPILGSVRNATKLFDVMKSWSVETVYHAAAYKHVPLVEHNIAEGMLNNVIGTLNTAQAA  414
             +PI++ V++  ++  VM++     VYHAAA KHVPL+E N  E++ NNV+GT NTA+AA
Sbjct  337  -IPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  415  LKAQVENFVLISTDKAVRPTNVMGSTKRLAEMVLQALSHELAPVLFADSGNVARVNKTRF  474
              A+V +FV++STDKAV P NVMG++KR+AEMV+Q++++E               +KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNE--------------TSKTDF  441

Query  475  VMVRFGNVLGSSGSVIPRFRQQIKSGGPITVTHPNITRYFMTIPEAAQLVIQAGSMGRGG  534
            V VRFGNVLGS GSVIP F++QI +GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  535  DVFVLDMGEPVKIAELAEKMVHLSGLNVCSEKNVHGDIAIEFTGLRPGEKLYEELLIGDN  594
            ++FVLDMG PVKI +LA ++++LSG +       + DI+IEF+G+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  595  VVATQ  599
            + + Q
Sbjct  555  IHPEQ  559

460) Tlet_1006 in NC_009828


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  283 bits (1059),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 211/495 (43%), Positives = 324/495 (66%), Gaps = 16/495 (3%)

Query  58   YKIVWLYASFKDMVLLMRGT----IIAYLLNVVFFHLTNFVVLPRSVGMMTFLGSTMILI  113
            Y   W YAS  +++L++++     + + ++  +F + + F+ L      +T +   +++ 
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLY----FITWMMHLLLIG  120

Query  114  ASRFFWQ-WLNTVPPSAGKR--VLIVGAGSAGTMLLEDFEHRPQLGKVVGFI--DDSPRK  168
            +SR+ W+   +T  +  GK+   LIVG+G +G++L+ +  + P +G    ++  DDS ++
Sbjct  121  GSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQ  180

Query  169  IGRKIHGVPVYGPADRAMEIVEMLKIDEVIIAIPSATAEQMRRIISLINPRRVKIRTLPG  228
                  GV V G      E+V  ++I  +IIAIP+ + +++R I  L +   V +  +P 
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  229  IYELTDGQARAGSLRELKIEDLLGREEVKVDLQQIKSYINGKRIMVTGAGGSIGSELCRQ  288
            I ++  G+     L+ + +EDLLGR+ V +D+  I   +  K I+VTGAGGSIGSE+CRQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  289  LSKLEPSTLILLGKGENSIYKIDEEL-RVENPSVERIRVIADISDPTRMEQVFRLTRPQI  347
            + K+ P  ++LLG GENSIY I++EL  + +  +E I +IAD+ D  RM +V +  +P +
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  348  VFHAAAHKHVPLMEENPYEALKVNTLGTKIVAELCCKFEAEKMIFISTDKAVNPSSIMGA  407
            V+HAAAHKHVPLME NP EA+K N LGT+  AE     E  K + +STDKAVNP+++MGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  408  TKRLAELLLLSM-NQGCKTNFVIVRFGNVIGSRGSVVPKFMDQISKGGPVTVTDQRMVRY  466
            +KR+AE+++ SM N+  KT+FV VRFGNV+GSRGSV+P F  QI  GGPVTVT+  M RY
Sbjct  421  SKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRY  480

Query  467  FMSLSEAVSLVLQAGSFGTNKDLFVLDMGKPISIDELARTMILLNGLIPEQDIKIVYTGS  526
            FM+++EA  LVLQAG+++T  ++FVLDMGKP+ I +LA+ +I L+G   E+DI I ++G 
Sbjct  481  FMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIGIEFSGI  539

Query  527  RSGEKMSEELFYEDE  541
            RSGEK+ EEL+  DE
Sbjct  540  RSGEKLFEELLNKDE  554

461) wbpM in NC_021499


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 208/509 (41%), Positives = 332/509 (66%), Gaps = 44/509 (8%)

Query  117  FNYWWLSLVLIGGLRLAIRQYFLGDWYVASQAIPFGPKDNGLPRVAIYGAGAAGNQLVTA  176
            F  W + L+LIGG RL+        W +  ++  F +K+       I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLS--------WRIYRKT--FISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  177  LRMGR--AMRPVAFIDDDSSIATRTI-SGLQVYKP-KHIQQMIDQTGAQEVLLAIPSATR  232
            +      +M PV  +DDDS+    +I SG++V    K+I +++ +   + +++AIP+ ++
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  233  VRRREILATLEGYPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPPRKELFERC  292
             R REI    EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V      + + 
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  293  IQSKVVMVTGAGGSIGSELCRQILGC--GPKTLILFEHSEFNLYNIQIELERRIARESQS  350
            +  K ++VTGAGGSIGSE+CRQ+  C   P  ++L+ H+E ++Y+I+ EL   I+   + 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQV--CKFTPDRIMLLGHGENSIYHIHQEL---IGLYKEE  333

Query  351  VQLIPILGSVRNLARLVDVMRTWDVDTVYHAAAYKHVPIVEHNIAEGVLNNVMGTLYTAQ  410
            +++IPI++ V++  R+  VM++     VYHAAA KHVP++E N  E++ NNV+GT  TA+
Sbjct  334  IEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAE  393

Query  411  AAVQAGVENFVLISTDKAVRPTNVMGSTKRLSEMTLQALSRESAPVMYGDSEAVHRVNKT  470
            AA  A V +FV++STDKAV P NVMG++KR++EM +Q+++ E++              KT
Sbjct  394  AAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KT  439

Query  471  RFTMVRFGNVLGSSGSVIPLFREQIKRGGPITVTHPNITRYFMTIPEAAQLVIQAGSMGQ  530
             F  VRFGNVLGS GSVIPLF+ QI  GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ 
Sbjct  440  DFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALAT  499

Query  531  GGDVFVLDMGQPVKIAELAEKMVHLSGLTVRSERNPSGDISIEFTGLRPGEKLYEELLIG  590
            GG++FVLDMG+PVKI +LA ++++LSG           DI+IEF+G+R+GEKL+EELL  
Sbjct  500  GGEIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNK  552

Query  591  DNVSPTE-HPMIMRANEEHLSW-DVYKRV  617
            D++ P +    I R++ + +   ++Y+++
Sbjct  553  DEIHPEQVYEKIYRGKVQKIEKEELYNKI  581

462) Pedsa_3253 in NC_015177


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  282 bits (1057),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 206/450 (46%), Positives = 305/450 (68%), Gaps = 7/450 (1%)

Query  145  KKRVVIFGAGETGIATKRALDTDPKINMSVVAFVDNDPRKSS-KVVDNVKIYH-ADYLER  202
            KK  +I G+G  G    R +   P + M  V  VD+D+ K    +   VK+      +  
Sbjct  140  KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPE  199

Query  203  ILLEEKIDSLIFTAPGMKTEEKNKVVDLCLDNNVKVLNVPLVRTWVKGTVKTTQIKDVKI  262
            ++   +I  +I++ P +  +    +  LC + NV V+++P +   + G +   ++K V +
Sbjct  200  LVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEV  259

Query  263  EDLLERDPIIIGESILNEQLSGKRILVTGAAGSIGSEIVRQLAKFNPQTIILNDIAETPl  322
            EDLL RDP+ ++ + ++ +L+ K ILVTGA+GSIGSEI RQ+ KF P+ I+L + +E ++
Sbjct  260  EDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSI  319

Query  323  helqlelqdn-nllnnFIAFIGDVRNKSRMEHLFETFKPHYVYHAAAYKHVPMMEHNPSE  381
             +++ EL +  +   + I++I+DV++K RM  + +++KP  VYHAAA KHVP+ME NP E
Sbjct  320  YHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQE  379

Query  382  AICTNVGGTKNMADLAVKHGAIKFVMVSTDKAVNPTNVMGASKRIAEIYVQSLFCSSANG  441
            AI  NV GT+N A+ A      KFVMVSTDKAVNP NVMGASKR+AE+ +QS+   + + 
Sbjct  380  AIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSM---NNET  436

Query  442  EKTRFITTRFGNVLGSNGSVIPRFREQIQKGGPLTVTHPDITRYFMTIPEACRLVLEAGS  501
             KT F++ RFGNVLGS GSVIP F+ QI+ GGP+TVTHP++TRYFMTIPEA RLVL+AG+
Sbjct  437  SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGA  496

Query  502  MGKGGEIYIFDMGQSVKIVELAKKMIRLSGFIPNQDIKIEFTGLRPGEKLYEELLNDKEN  561
            ++ GGEI+++DMG++VKIV+LAK++IRLSG+  ++DI IEF+G+R+GEKL+EELLN  E 
Sbjct  497  LATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIGIEFSGIRSGEKLFEELLNKDEI  555

Query  562  TMPTHHEKIMIAKVIPYEFESVSIHIEDLV  591
                  EKI  +KV   E E +   I+D++
Sbjct  556  HPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

463) M636_20595 in NC_021848


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  282 bits (1055),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 215/521 (42%), Positives = 342/521 (66%), Gaps = 38/521 (7%)

Query  64   VFARL-GLYRAVLRYLTFQALFVVT---TGAIISATLVAALSFYMSDPFPRTVPIIYGAF  119
            VFA++ +LY+    Y +   L+++    T++I+++ ++ ++ F    PF R   I     
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPI-FTQQAPFLRLYFITWMMH  115

Query  120  LALFCGGP---RVIVRSLIAQSYSTQSKEVLIYGAGSGGRQLAMALRSCGDYRV--RAFI  174
            L L+ G+    R+  +++I++    + K  LI G+G GG  L   + +   Y      ++
Sbjct  116  LLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMN-TPYMGMEPVLV  172

Query  175  DGDSTLCNTMILGLPVIA---IEDAMPIINKYDVSQVLLAVPSAKRSRRKVILDELAKL-  230
             +D +  + M ++  V     I D   +++K+++ ++++A+P+  + R    L E+ KL 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR----LREINKLC  228

Query  231  ---PVEVLTVPDMTDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTG  287
                VEV+ +P++ +++SG   ++ LK V +EDLLGRDPV  +   +  ++ +K ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  288  AGGSIGSELCRQIVEQSPKSIILFELSEFGLYQIDRELNQLKIEKGLTCDIIPLLGSVQR  347
            AGGSIGSE+CRQ+   +P  I+L+  +E ++Y+I++EL  L  E     ++IP+++ VQ 
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQD  345

Query  348  QHRLETTMSSFKVQTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVL  407
            ++R+   M ++K   VYHAAA KHVPL+E+N  E+++NN+ GT  TA AA  A V  FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  408  ISTDKAVRPTNVMGTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFK  467
            +STDKAV P NVMG++KR+AE+ +Q++ ++E +K +   F  VRFGNVLGS GSVIP+FK
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSM-NNETSKTD---FVAVRFGNVLGSRGSVIPLFK  461

Query  468  KQIASGGPVTVTHPEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGEPVKITDLACNL  527
            KQI +GGPVTVTHP +TR+FMTIPEA++LV+QAGA++ GG++FVLDMG PVKI DLA NL
Sbjct  462  KQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNL  521

Query  528  IQLSGLEVKSENNPHGDIEIQFTGLRPGEKLYEELLIEDNV  568
            I+LSG         + DI I+F+G+R+GEKL+EELL  D++
Sbjct  522  IRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

464) ELI_13370 in NC_007722


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  282 bits (1054),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 194/474 (41%), Positives = 306/474 (65%), Gaps = 19/474 (4%)

Query  161  KSGPRSRVLIYGAGSAGRQLALSLRHEPAMHLAGYI---DDDDRLARKHVDGVRVHP-PT  216
            K G +   LI G+G +G  L   + + P M +   +   DD ++       GV+V+    
Sbjct  136  KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIK  195

Query  217  GLEDLIHDLEIDTVLLALPRIGRKQREMIVRQFEGISVRVLTLPAMGDLIDGRVSVGDLR  276
            ++ +L+  ++I  +++A+P +++++   I +  EG +V V+ +P + +++ G + V  L+
Sbjct  196  DIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLK  255

Query  277  EIEISDLLGRDPVPPNHLLLHKTIQDKVVMVTGAGGSIGSELCRQVSQLKPEVLILVEMA  336
             +E+ DLLGRDPV  +   + K + +K ++VTGAGGSIGSE+CRQV ++ P+ ++L+  +
Sbjct  256  KVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHG  315

Query  337  EHALYLIETELRGLQESGDIDPSIAIVTELCNVSNTDQVKRIMQRWRPGTVFHAAAYKHV  396
            E+++Y I+ EL GL         I ++  + +V + +++K++MQ  +P  V+HAAA KHV
Sbjct  316  ENSIYHIHQELIGL-----YKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  397  PLVEDNVISGMTNNIFGTLNCARAAADAGVAHFILISTDKAVRPTNVMGASKRVCELILQ  456
            PL+E N   ++ NN++GT N A AA  A V+ F+++STDKAV P NVMGASKRV E+++Q
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  457  ALAANGSETLFAIVRFGNVLGSSGSVVPRFKEQIKNGGPITLTHREITRYFMTIPEASQL  516
            ++  + S T F  VRFGNVLGS GSV+P FK QI  GGP+T+TH  +TRYFMTIPEAS+L
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  517  VIQAGAMAEGGEVYVLDMGEPVKIYDLAKTMINLSGLSVKDAEHPDGDIEIIEVGLRKGE  576
            V+QAGA+A GGE++VLDMG PVKI DLAK +I LSG         + DI I   G+R GE
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG-------YKEEDIGIEFSGIRSGE  543

Query  577  KLYEELLIGNSPKPTR-HQRIMQAREVMLPWPELEPQLAELRKLLSGGNRSEAL  629
            KL+EELL  +   P +  ++I +++   +   EL  ++ ++  L++ + R E +
Sbjct  544  KLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF--LINESVRDEII  595

465) MDS_1979 in NC_015410


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  281 bits (1050),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 203/458 (45%), Positives = 307/458 (68%), Gaps = 43/458 (9%)

Query  1    MQPVAFVDDDDNIAT-RIIAGLQVYKP-KHIQQMVEETGAQEILLAVPSLSRARRREILE  58
            M+PV  VDDD N     I +G++V    K+I ++V     + I++A+P+LS+ R REI  
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  59   -CLEGFPLHVRSVPGFMDLASGRVKVDDLQEVDIADLLGRDPVPPNQALLDRCIKGQVVM  117
             C EG  ++V  +P + ++ SG + V+ L+ V++ DLLGRDPV  + A + + +  + ++
Sbjct  227  LC-EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTIL  285

Query  118  VTGAGGSIGSELCRQILASAPRVLVLFDHSEYNLYSIHTELEQRIQREYLPVQLIPILGS  177
            VTGAGGSIGSE+CRQ+   +P  ++L++H+E ++Y IH EL    + E   +++IPI++ 
Sbjct  286  VTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIAD  342

Query  178  VRNAARLLDVMQTWHVNTVYHAAAYKHVPMVEHNIAEGVLNNVVGTLNAAQSAIQAGVEH  237
            V++  R+  VMQ+     VYHAAA KHVP++E N  E++ NNV+GT N+A++A  A V  
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  238  FVLISTDKAVRPTNVMGSSKRLAEMILQALSDESAPVLFGEDGVHRVNKTRFNMVRFGNV  297
            FV++STDKAV P NVMG+SKR+AEM++Q++++E++             KT F  VRFGNV
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS-------------KTDFVAVRFGNV  449

Query  298  LGSSGSVIPRFHEQIRRGGPLTVTHPNITRYFMTIPEAAQLVIQAGSLGQGGDVFVLDMG  357
            LGS GSVIP F  QI  GGP+TVTHP +TRYFMTIPEA++LV+QAG+L+ GG++FVLDMG
Sbjct  450  LGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMG  509

Query  358  PPVKILDLAEKMIHLSGLSVRSERNPHGDISIEFTGLRPGEKLYEELLIGNDVSQTQHPM  417
             PVKI+DLA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  +++   Q   
Sbjct  510  KPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ---  559

Query  418  IMRANEEMLSWDVYKRVLRELLGALESDD-YDRVRQLL  454
                        VY ++ R  +  +E ++ Y+++ ++L
Sbjct  560  ------------VYEKIYRGKVQKIEKEELYNKIDDFL  585

466) Mlg_0802 in NC_008340


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  281 bits (1051),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 217/496 (44%), Positives = 333/496 (68%), Gaps = 25/496 (5%)

Query  67   FGLYRAVVRYMGLQAIIAVVQGVTLSALVFGALV-MLGRLEGIPRSALLIYWLLALFMVG  125
            F+LY+    Y ++  +I +V++VT S +  G +V ++ +   + R   +I W++ L+++G
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIG  120

Query  126  GSRLVVRAW--FQAA-IKRRGTEKPVVIYGAGTGGIGLATSLFNGRQYR---PVAFVDDN  179
            GSRL   +W  ++ + I + G  KP +I G+G GG  L   + N   Y    PV  VDD+
Sbjct  121  GSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLVVDDD  176

Query  180  PAKQG-TVIAGLPVRKPA-ELAELIDRNRLEYILLAMPRLSRTRRREIVAQLEPLPAHIL  237
            + KQ  ++ +G+ V+    +++EL+ +  +  I++A+P LS+ R REI    E    +++
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  238  TIPSLADIVANRASPDevreveveDLLGRDAVGPRRELLARCIRGKTVMVTGAGGSIGSE  297
             +P++ ++++     + ++ VEVEDLLGRD+V      +++ +  KT++VTGAGGSIGSE
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  298  LCRQILREQPTQLVLVERSEFALYAIERELQAQLQGEARRPAVQAVLANVTDLARMEMLM  357
            +CRQ+ +  P +++L+ ++E ++Y I++EL +  + E     V +++A+V D  RM  +M
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEI---EVIPIIADVQDKERMKKVM  353

Query  358  HAFRVDTVYHAAAYKHVPLVETNVLEGIDNNVFGTLHTALAAVEAGVRYFVLVSTDKAVR  417
            +A++   VYHAAA KHVPL+E N  E+I NNV+GT +TA AA  A V  FV+VSTDKAV 
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  418  PTNVMGASKRLAELVLQGLARQPDIRTRFSMVRFGNVLGSSGSVVPLFREQIRNGGPITV  477
            P NVMGASKR+AE+V+Q++  +   +T F  VRFGNVLGS GSV+PLF+ QI  GGP+TV
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETS-KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTV  472

Query  478  THPEVTRYFMTIPEAASLVLQAGSMAHGGEVFVLDMGEPVRIVDLARRMIRLSGLEERNA  537
            THP +TRYFMTIPEA+ LVLQAG++A GGE+FVLDMG PV+IVDLA+ +IRLSG      
Sbjct  473  THPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG------  526

Query  538  EHPDGDIEIHFTGLRP  553
               + DI I+F+G+R+
Sbjct  527  -YKEEDIGIEFSGIRS  541

467) A11Q_1460 in NC_020813


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  281 bits (1053),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 207/449 (47%), Positives = 310/449 (70%), Gaps = 18/449 (4%)

Query  115  WILSALYIAASRY---LARGILLSLESKERYKQKVAIYGGGKAGLQTALALMNGP--EYK  169
            W++  L I++SR    + R  ++S E+K   K+   I GGG++G      +MN P     
Sbjct  112  WMMHLLLIGGSRLSWRIYRKTFISKEGK---KKPTLIVGGGRGGSLLIRQMMNTPYMGME  168

Query  170  PVLFFDDNVELHGTTIA-GIRVFN-PKLAEETMLQYGCNQLLLAVPSAPRSKRREIIRRF  227
            PVL  DD+ + +  +IA G++V    K   E + ++  +++++A+P+ ++ + REI +  
Sbjct  169  PVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  228  EGKNIHLKTIPGMGELVTGQVKVDDIREVGIEDLLGRDPVPPFEHLISVCIEKKVVLVTG  287
            EG N+++  +P + ++++G++ V+ ++ V +EDLLGRDPV      IS  +  K +LVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  288  AGGSIGSELCRQILRHHPARVILFERSEYLLYKIERELSELCCHA-EVVPILGDVLDKQS  346
            AGGSIGSE+CRQ+ +  P R++L+ ++E  +Y I++EL  L  +  EV+PI++DV DK+ 
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  347  VDRVIRQYDVKTIYHAAAYKHVPLVEANIVAGVMNNVFGTLNVAKAAIDQKVETFVLIST  406
            + +V++ Y    +YHAAA KHVPL+E N   ++ NNV+GT N A AA    V  FV++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  407  DKAVRPTNVMGATKRLAELILQALASKKPSTRFCMVRFGNVLGSSGSVVPLFREQIRNGG  466
            DKAV P NVMGA+KR+AE+++Q++ +  + T F  VRFGNVLGS GSV+PLF+ QI  GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  467  PVTVTHPEVTRYFMTIPEASQLVLQAGAMGAGGEVFVLDMGESVRISDLAKKMIVLSGLE  526
            PVTVTHP +TRYFMTIPEAS+LVLQAGA+++GGE+FVLDMG +V+I DLAK++I LSG  
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-  527

Query  527  VKDPETKRGDIAIQYIGLRPGEKLYEELL  555
                  K  DI+I++ G+R+GEKL+EELL
Sbjct  528  ------KEEDIGIEFSGIRSGEKLFEELL  550

468) Psyr_3636 in NC_007005


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  281 bits (1053),  Expect = 9e-77, Method: Compositional matrix adjust.
 Identities = 219/534 (42%), Positives = 348/534 (66%), Gaps = 40/534 (7%)

Query  70   FGMYRAVMRYFGNDALIAIIKAVTMSSLILGCMVYVYSNHQQLVPRSVIFNYWWLSMVMI  129
            F++Y+    Y +   LI I+K+VT S +  G +V +++++  ++   + F  W + +++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL--RLYFITWMMHLLLI  119

Query  130  GGLRLAMRQYFLGDWFAAAQHVPFAKSDNGLQKVAIYGAGAAGNQLVAALRMGRLM--HP  187
            GG RL+ R Y          +  F   +   +   I G+G +G+ L+  +     M  +P
Sbjct  120  GGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  188  VAFIDDDESISN-RVISGLQVYKP-RNIQRMIDSTGAQEILLAIPSSSRGRRREILGFLE  245
            V  +DDD +  +  + SG++V    ++I  ++     + I++AIP+ S+ R REI  + E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  246  GFPLHVRSVPGFMDLAAGRVKVDDLQEVDIADLLGRDAVPARDNLLEHCIKGKTVLVTGA  305
            G  ++V  +P + ++ +G + V+ L+ V++ DLLGRD+V      +   +  KT+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  306  GGSIGSELCRQIlllkptqllllDHSEFNLYSILSELEQRSARESLSVKLLPILGSVRNH  365
            GGSIGSE+CRQ+  + P +++LL+H+E ++Y I  EL      E   + ++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  366  PKLLSIMKTWKVDTVYHAAAYKHVPMVEHNIAEGVINNVVGTLNTAQAALQAGVSNFVLI  425
             ++  +M++ K   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA  A VS+FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  426  STDKAVRPTNVMGSTKRLAELILQALSRETAPVIFGDKANVYQVNKTRFTMVRFGNVLGS  485
            STDKAV P NVMG++KR+AE+++Q+++ ET+              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  486  SGSVIPLFHKQIQSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGHGGDVFVLDMGEPV  545
             GSVIPLF KQI++GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  546  KIVELAEKMIHLSGLAIRSEKNPHGDISIEFTGLRPGEKLYEELLIGDNVVATE  599
            KIV+LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D++ + +
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

469) VPBB_0247 in NC_019955


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  281 bits (1052),  Expect = 9e-77, Method: Compositional matrix adjust.
 Identities = 212/521 (41%), Positives = 343/521 (66%), Gaps = 38/521 (7%)

Query  48   VFARL-GLYRAVLRYLTFQALFVVT---AGAIISATLVAALSFYMSDPFPRTVPVIYAAF  103
            VFA++ +LY+    Y +   L+++    +++I+++ ++ ++ F    PF R   +     
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPI-FTQQAPFLRLYFITWMMH  115

Query  104  LALFCGGP---RVIVRSLIAQSYSTQSKEVLIYGAGSGGRQLAMALRSSGDYRV--RAFI  158
            L L+ G+    R+  +++I++    + K  LI G+G GG  L   + ++  Y      ++
Sbjct  116  LLLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLV  172

Query  159  DGDSTLCNTMILGLPVIA---IEDAMPIINKYDVSQVLLAVPSAKRSRRKVILDELAKL-  214
             +D +  + M ++  V     I D   +++K+++ ++++A+P+  + R    L E+ KL 
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR----LREINKLC  228

Query  215  ---PVEVLTVPDMTDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTG  271
                VEV+ +P++ +++SG   ++ LK V +EDLLGRDPV  +   +  ++ +K ++VTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  272  AGGSIGSELCRQIVEQSPKSIILFELSEFGLYQIDRELNQLKVEKGLTCDIVPLLGSVQR  331
            AGGSIGSE+CRQ+   +P  I+L+  +E ++Y+I++EL  L  E     +++P+++ VQ 
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQD  345

Query  332  QHRLETTMSSFKVQTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVL  391
            ++R+   M ++K   VYHAAA KHVPL+E+N  E+++NN+ GT  TA AA  A V  FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  392  ISTDKAVRPTNVMGTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFK  451
            +STDKAV P NVMG++KR+AE+ +Q++ ++E +K +   F  VRFGNVLGS GSVIP+FK
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSM-NNETSKTD---FVAVRFGNVLGSRGSVIPLFK  461

Query  452  KQIASGGPVTVTHPEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLACNL  511
            KQI +GGPVTVTHP +TR+FMTIPEA++LV+QAGA++ GG++FVLDMG +VKI DLA NL
Sbjct  462  KQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNL  521

Query  512  IQLSGLEVKSEANPHGDIEIQFSGLRPGEKLYEELLIGDNV  552
            I+LSG         + DI I+FSG+R+GEKL+EELL  D++
Sbjct  522  IRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

470) pglF in NC_021878


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1049),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 209/487 (43%), Positives = 325/487 (67%), Gaps = 24/487 (4%)

Query  99   FIDLIFYTFIINILVY-----VYKYYHS--VGKNKKTKNLVIYGAGKAGLQLQREFLSSE  151
            F+ L F T ++++L+        + Y+   ++K+ K K  +I G+G++G  L R+ +++ 
Sbjct  104  FLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP  163

Query  152  YK---LVCFIDDDEILHHRSID-GISIYS-KEKYCSLFENQKFDLMIIAMPSASQEQIKI  206
            Y     V  +DDD   +  SI  G+ + +       L  + ++  +IIA+P+ SQ++++ 
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  207  IYEFMQDKFEKIKILPSMNNILKKEEFTKQLKDIGVEDLLARYPKDLDKKQIENFIKDKI  266
            I  + ++    +  +P+++N++  E   ++LK + VEDLL+R P +LD   I + + +K 
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  267  VLITGAGGSIGSEISRQ-CKTYGAKQLILLDHSEFNLYSILEEL----KDE-NIVPIMQS  320
            +L+TGAGGSIGSEI RQ CK + + +++LL+H+E ++Y I +EL    K+E +++PI+  
Sbjct  284  ILVTGAGGSIGSEICRQVCK-FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIAD  342

Query  321  VRDIKALESSFEKYKPQIVIHAAAYKHVPLVEYNILEGITNNIIGTKNCIDLSIKYGAQK  380
            V+D   +    + YKP +V HAAA KHVPL+EYN  E+I NN++GT+N  + +      K
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  381  FVLISTDKAVRPTNIMGTTKRICELYAQNV--ESKNTEIVAVRFGNVLGSSGSVIPKFKS  438
            FV++STDKAV P N+MG++KR+ E+  Q++  E+ +T++VAVRFGNVLGS GSVIP FK 
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  439  QIEQGKNITVTHPEITRYFMLIPEACELVLQAASIANGGEIFILDMGEPIKIVDLAKKMI  498
            QIE G  +TVTHP +TRYFM IPEA  LVLQA+++A GGEIF+LDMG P+KIVDLAK++I
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  499  ELSG--RSDINIEFCGLRLGEKLYEELLINDSDQKTK-YESITVANSTKFDINELNKKIE  555
             LSG    DI IEF G+R GEKL+EELL +D  +  + YE I  ++  K++ +EL +KI+
Sbjct  523  RLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

Query  556  ELLICED  562
            ++LI E 
Sbjct  583  DFLINES  589

471) VV0364 in NC_005139


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1049),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 217/521 (42%), Positives = 345/521 (67%), Gaps = 30/521 (5%)

Query  64   IFTKL-GLYRAVLRYLTFHALTVVVLGALISALSITTFAYFFNAEVPRTVPVIYMTFLA-  121
            +F+++ +LY+    Y +   L ++V +   S ++   +  +F  + P  + + ++T +  
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAP-FLRLYFITWMMH  115

Query  122  -LLCGGARMM----VRSLIVQASRKGCERVLIYGAGSTGRQLAIALRNAETYQVKG---F  173
             LL GG+R+      +++I + ++K     LI G+G  G  L   + N+  Y        
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLV  172

Query  174  IDNDPSLEN-TIIQGLTVHSS-QQISRLVEKKEIEKILLAMPRATRSERKAIIDGLLHLP  231
            +D+D++ ++ +I  G+ V++  ++I+ LV K +I KI++A+P  ++   + I        
Sbjct  173  VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTN  232

Query  232  VEVLTVPDFKDIVNGNATVDELKDVAIEDLLGRDPVEPNPELMKANIHGKVVMVTGAGGS  291
            VEV+ +P++ ++++G+  V+ LK V +EDLLGRDPVE +   +  ++  K ++VTGAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  292  IGSELCRQIVRQKPKTLILFELSEYGLYEIDKELSGMVEAMQLEVEIIPLLGSVQRINRL  351
            IGSE+CRQ+ +  P  ++L+  +E ++Y+I++EL G+      E+E+IP+++ VQ  +R+
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERM  349

Query  352  SATMRAFGVQTVYHAAAYKHVPLVEYNVVEGVRNNVFGTYYSAKAAIEAGVESFVLISTD  411
               M+A+    VYHAAA KHVPL+EYN  E+++NNV+GT  +A AA  A V  FV++STD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  412  KAVRPTNVMGTSKRMaelalqalaaKENDKVNGTRFCMVRFGNVLGSSGSVIPLFKRQIE  471
            KAV P NVMG+SKR+AE+ +Q++    N+  + T F  VRFGNVLGS GSVIPLFK+QIE
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSM----NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIE  465

Query  472  EGQAITVTHPDIIRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGEPVKIVDLAKNLIQLS  531
             G ++TVTHP++ RYFMTIPEA++LV+QAGA++ GG++FVLDMG PVKIVDLAKNLI+LS
Sbjct  466  AGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLS  525

Query  532  GLEVKSSDNPNGDIEIKFTGLRPGEKLYEELLIGDNVEGTD  572
            G         + DI I F+G+R+GEKL+EELL  D+++  +
Sbjct  526  GYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

472) Q7C_745 in NC_017856


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1048),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 209/513 (41%), Positives = 354/513 (70%), Gaps = 26/513 (5%)

Query  68   VFAR-FGLYRTVIRYIGLDAIWAILKAITLYTLILAVVILLAREYAGLVPRTIYAINAIL  126
            VFA+ F+LY+    Y ++  +  I+K++T   +  ++++ +  + A ++   +Y I  ++
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMM  114

Query  127  LVLMIGGSRIMARWAFTRQQISSEQRRKQAEFLPPVIIYgagaagaqlaaILK---MGNQ  183
             +L+IGGSR ++++ + +  IS E ++K     P +I+ G+ +++  +  +++   MG  
Sbjct  115  HLLLIGGSR-LSWRIYRKTFISKEGKKK-----PTLIVGGGRGGSLLIRQMMNTPYMG--  166

Query  184  LRPVAFIDDDQTLHHQQI-NGLTVYAP-SALSSLIKRFETAELLLAMPSVSRRQRQQILQ  241
            + PV  +DDD   +   I +G+ V +    ++ L+K+F+   +++A+P++S+++ ++I +
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  242  TLESYPVRIRTLPGMSEIAQGKISVSDIREVEIGDLLGREPVAPDTVLLTRNITDKTVMV  301
              E+  V +  +P + ++  G I V+ ++ VE+ DLLGR+PV  D   +++++T+KT++V
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  302  TGAGGSIGSELCRQIIQQQPRQLVLYEISEYALYEIEKSLHHLGRD-VPIVSLLGSVLDK  360
            TGAGGSIGSE+CRQ+ +  P +++L   +E ++Y+I++ L  L ++ + ++++++ V DK
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDK  346

Query  361  NRLQKACQHFGVQTIYHAAAYKHVPMVEKNITEGVRNNVLGTLNTALAAMAAEVETMVLI  420
            +R++K  Q +    +YHAAA KHVP++E N  E+++NNVLGT NTA AA  AEV   V++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  421  STDKAVRPTNTMGASKRFAELILQALATNEPQSATRFTMVRFGNVLGSSGSVIPLFRQQI  480
            STDKAV P N MGASKR AE+++Q++  + +++   F  VRFGNVLGS GSVIPLF++QI
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD--FVAVRFGNVLGSRGSVIPLFKKQI  464

Query  481  ANGGPVTVTHPDIIRYFMTIPEAAELVIQAGAMGEGGDVFVLDMGEPVKIIDLARRLVHL  540
              GGPVTVTHP++ RYFMTIPEA+ LV+QAGA++ GG++FVLDMG PVKI+DLA+ L++L
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  541  SGLSIRDETRPDGDIEIQFTGLRPGEKLYEELL  573
            SG         + DI I+F+G+R+GEKL+EELL
Sbjct  525  SGYK-------EEDIGIEFSGIRSGEKLFEELL  550

473) CTN_1131 in NC_011978


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1049),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 207/517 (41%), Positives = 328/517 (64%), Gaps = 15/517 (2%)

Query  60   YSVVWEYANARDFLLLIRGSVISYISALAFFYFYRDVVLPRSVGFATFLGSMILIVLSRI  119
            Y   WEYA+  +++L++++   S +++  +  ++ +      + F T +  ++LI  SR+
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRL  124

Query  120  TWQ--WLTLSRKGRPTEKRIMIIGAGDAGVSILEEFEKHPHLGK--VVAFMDDSPRKIGR  175
            +W+  + T+  K     K  +I+G+G +G  ++ +  + P +G   V+   DDS ++   
Sbjct  125  SWRIYRKTFISKE-GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  176  RVRGIPVFGPIDRTMEYVERLGVDEVIVAIPSATKQQMERILGSIDLKKVKVKTLPSIRE  235
               G+ V G I    E V ++ +  +I+AIP+ ++Q++  I    +  +V V  +P+I +
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  236  LMEDRVRLSHLKDISIEDLLGREEVKIDVRGIENLLKGKRILVTGAGGSIGSELCKQIAK  295
            +M + + ++ LK + +EDLLGR+ V +D+ +I + L  K ILVTGAGGSIGSE+C+Q+ K
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  296  MNPEELILLGHGENSIYLIDEFLSENF-PNLKKKRVIADVACENLMELWMSRLKPDIVFH  354
              P+ ++LLGHGENSIY I++ L   +  ++    +IADV   + M   M   KP +V+H
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  355  VAAHKHVPLMEENPLEAFRVNTLGTINLVELSRKMKVKHFVFISTDKAVNPTSVMGLTKR  414
             AAHKHVPLME NP EA++ N LGT N  E ++   V  FV +STDKAVNP +VMG +KR
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  415  ISELYI--MTQDTDDTKFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPRMKRYFMS  472
            ++E+ I  M ++T  T F  VRFGNVLGSRGSV+  F++QIE GGPVTVT+P M RYFM+
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  473  IPEAVSLILQSLLYSSGNDLFILDMGEQIPIVKLAETMIMLSGFVPHQDIKIVYTGVRPG  532
            IPEA  L+LQ+   ++G ++F+LDMG  + IV LA  +I LSG+  ++DI I ++G+R+G
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY-KEEDIGIEFSGIRSG  542

Query  533  EKMYEELTYPYERKEFTPHP---KIFRVKSDSLPSRE  566
            EK++EEL    ++ E+ P+    KI+R K + +   E
Sbjct  543  EKLFEELL---NKDEIHPEQVYEKIYRGKVQKIEKEE  576

474) N175_02210 in NC_022223


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1046),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 201/458 (44%), Positives = 312/458 (69%), Gaps = 25/458 (5%)

Query  120  LAILSLGGPRILIRTIYYHYY----KRQKPNVFIYGAGSTGRDLAYALIQGDEY---HPV  172
            + +L +GG+R L + IY   +     ++KP +++  +G+ G  L    +    Y   +PV
Sbjct  114  MHLLLIGGSR-LSWRIYRKTFISKEGKKKPTLIV--GGGRGGSLLIRQMMNTPYMGMEPV  170

Query  173  ILLDDDPIKAG-QIMFGIRVHHS-DQFERLQSLYQPVKLLLAINNMNKGERLRLLERLSH  230
            +++DDD+ K    I  G++V+    ++  L   ++  K+++AI  +++ +RLR +++L +
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCE  229

Query  231  -WPIEVQSVPSVEDIAAGRAQATDVQDLDISDLLGRAPIAPDKALLSRNITGKSVMVTGA  289
               +EV  +P++E++ +G  +   ++ +++ DLLGR P+  D A +S+++T K+++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  290  GGSIGSELCRQIIAQKPKTLVLFELNEYNLYSIDQELQAIKQNLKLETKIVAALGSVQKE  349
            GGSIGSE+CRQ+    P  ++L+   E ++Y I+QEL ++    K E  +++ ++ VQ  
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL---YKEEIEVIPIIADVQDK  346

Query  350  NRLHKLMVAHKVNTIYHAAAYKHVPLVEDNVIEGIRNNVFGTLACATAAIEAGVESFTLI  409
            +R+ K+M A K   +YHAAA KHVPL+E N  E+I+NNV+GT   A AA  A V  F ++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  410  STDKAVRPTNIMGTSKRMAELVLQALADKGTKTIFTMVRFGNVLGSSGSVVPLFKKQIKA  469
            STDKAV P N+MG+SKR+AE+V+Q++ +  +KT F  VRFGNVLGS GSV+PLFKKQI A
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  470  GGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMGHNGQVFVLDMGEPVKIVDLAKRMIHLMG  529
            GGPVTVTHP++ RYFM IPEA++LV+QAGA++  G++FVLDMG PVKIVDLAK +I+L G
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  530  MKEYFDGNSNEGDIEIKFTGLRPGEKLYEELLIGDNVE  567
             K        E DI I F+G+R+GEKL+EELL  D+++
Sbjct  527  YK--------EEDIGIEFSGIRSGEKLFEELLNKDEIH  556

475) VAA_02504 in NC_015633


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1046),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 201/458 (44%), Positives = 312/458 (69%), Gaps = 25/458 (5%)

Query  120  LAILSLGGPRILIRTIYYHYY----KRQKPNVFIYGAGSTGRDLAYALIQGDEY---HPV  172
            + +L +GG+R L + IY   +     ++KP +++  +G+ G  L    +    Y   +PV
Sbjct  114  MHLLLIGGSR-LSWRIYRKTFISKEGKKKPTLIV--GGGRGGSLLIRQMMNTPYMGMEPV  170

Query  173  ILLDDDPIKAG-QIMFGIRVHHS-DQFERLQSLYQPVKLLLAINNMNKGERLRLLERLSH  230
            +++DDD+ K    I  G++V+    ++  L   ++  K+++AI  +++ +RLR +++L +
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCE  229

Query  231  -WPIEVQSVPSVEDIAAGRAQATDVQDLDISDLLGRAPIAPDKALLSRNITGKSVMVTGA  289
               +EV  +P++E++ +G  +   ++ +++ DLLGR P+  D A +S+++T K+++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  290  GGSIGSELCRQIIAQKPKTLVLFELNEYNLYSIDQELQAIKQNLKLETKIVAALGSVQKE  349
            GGSIGSE+CRQ+    P  ++L+   E ++Y I+QEL ++    K E  +++ ++ VQ  
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGL---YKEEIEVIPIIADVQDK  346

Query  350  NRLHKLMVAHKVNTIYHAAAYKHVPLVEDNVIEGIRNNVFGTLACATAAIEAGVESFTLI  409
            +R+ K+M A K   +YHAAA KHVPL+E N  E+I+NNV+GT   A AA  A V  F ++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  410  STDKAVRPTNIMGTSKRMAELVLQALADKGTKTIFTMVRFGNVLGSSGSVVPLFKKQIKA  469
            STDKAV P N+MG+SKR+AE+V+Q++ +  +KT F  VRFGNVLGS GSV+PLFKKQI A
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  470  GGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMGHNGQVFVLDMGEPVKIVDLAKRMIHLMG  529
            GGPVTVTHP++ RYFM IPEA++LV+QAGA++  G++FVLDMG PVKIVDLAK +I+L G
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  530  MKEYFDGNSNEGDIEIKFTGLRPGEKLYEELLIGDNVE  567
             K        E DI I F+G+R+GEKL+EELL  D+++
Sbjct  527  YK--------EEDIGIEFSGIRSGEKLFEELLNKDEIH  556

476) ACL_1089 in NC_010163


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1046),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 210/508 (42%), Positives = 337/508 (67%), Gaps = 21/508 (4%)

Query  78   LLNQIFGIYRIISKYASFEDFFRMILVVTGTNILLVLAIFLFNIEVMSESAFITITLIEI  137
            ++ QIF++Y+    YAS  +++ ++  VT++ +   + + +F  +      ++   ++++
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHL  116

Query  138  TGMIIPRIIRRTTSLVAYRLRLKVSHETGVRTLIIGAGSAGEMVVKEIYKN--KSLNNVL  195
              +  +R+ +R      YR  +   +     TLI+G+G +G ++++++ +    +++ VL
Sbjct  117  LLIGGSRLSWRI-----YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  196  IGFVDDDKEKVGRQIM-GISILGTLDNIKEIVGRYAVQEVIIAIKNFPKHRFHELVNSLI  254
            +  VDDD +K    I  G+ + G + +I E+V ++ ++ +IIAI  ++++R++E +N L 
Sbjct  172  V--VDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE-INKLC  228

Query  255  Q-LHIKVKKLNLIEDV--NQNEVSKLVDLKVEDLLNRPVIKLDNKGIRDFIGDEVVLVTG  311
            +  ++ V K+  IE+V   + EV+KL  + VEDLL R  + LD  +I   + +  +LVTG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  312  GGGSIGSELCRQIFELNPKQLIIFDIYENNAYEIQMELNRKVYKDSSKQYPKLDVRIGSV  371
            +GGSIGSE+CRQ+  + P ++++++  EN+ Y+I+ EL   +YK+     P     I+ V
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELI-GLYKEEIEVIPI----IADV  343

Query  372  YNKVRLEEIFKEFKPTIVFHAAAYKHVPLMEDSAVESVRTNVLGTMNTAKLSTKYGVKKF  431
             +K R+  + + +KP +V+HAAA KHVPLME ++ E+++ NVLGT NTA  +    V KF
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  432  VLVSSDKAVRSTNIMGASKRFAELIIFN-EQKHSETSFTAVRFGNVLGSNGSVIPLFKKQ  490
            V+VS+DKAV + N+MGASKR AE++I + ++  S T F AVRFGNVLGS GSVIPLFKKQ
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  491  IEDGGPVTVTHKEITRYFMTIPESVSLILQCGAYAKNGELFILDMGEPVKIYEFAEKMIR  550
            IE GGPVTVTH  +TRYFMTIPE+  L+LQ GA A  GE+F+LDMG PVKI ++A ++IR
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  551  LAGYRVDEDIKIEVVGLRPGEKLYEELL  578
            L+GY+ +EDI IE  G+R+GEKL+EELL
Sbjct  524  LSGYK-EEDIGIEFSGIRSGEKLFEELL  550

477) wbpM in NC_004578


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1046),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 220/534 (42%), Positives = 348/534 (66%), Gaps = 40/534 (7%)

Query  70   FGMYRAVMRYFGNDALIAIIKAVTMSSLILGCMVYVYSNHQQLVPRSVIFNYWWLSLVMI  129
            F++Y+    Y +   LI I+K+VT S +  G +V +++++  ++   + F  W + L++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFL--RLYFITWMMHLLLI  119

Query  130  GGLRLAMRQYFLGDWFAAAQHVPFAKSDNGLQKVAIYGAGAAGNQLVAALRMGRLM--HP  187
            GG RL+ R Y          +  F   +   +   I G+G +G+ L+  +     M  +P
Sbjct  120  GGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  188  VAFIDDDESISN-RVISGLQVYKP-RNIQRMIDSTGAQEILLAIPSSSRGRRREILGFLE  245
            V  +DDD +  +  + SG++V    ++I  ++     + I++AIP+ S+ R REI  + E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  246  GFPLHVRSVPGFMDLAAGRVKVDDLQEVDIADLLGRDAVPARENLLEHCIKGKTVLVTGA  305
            G  ++V  +P + ++ +G + V+ L+ V++ DLLGRD+V      +   +  KT+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  306  GGSIGSELCRqilllqpvqllllDHSEFNLYSILSELEQRSARESLSVKLLPILGSVRNH  365
            GGSIGSE+CRQ+  + P +++LL+H+E ++Y I  EL      E   + ++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  366  PKLLSIMKTWKVDTVYHAAAYKHVPMVEHNIAEGVINNVVGTLNTAQAALQAGVSNFVLI  425
             ++  +M++ K   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA  A VS+FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  426  STDKAVRPTNVMGSTKRLAELILQALSRETAPVIFGDKANVYQVNKTRFTMVRFGNVLGS  485
            STDKAV P NVMG++KR+AE+++Q+++ ET+              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  486  SGSVIPLFHKQIQSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGHGGDVFVLDMGEPV  545
             GSVIPLF KQI++GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  546  KIVELAEKMIHLSGLAIRSEKNPHGDISIEFTGLRPGEKLYEELLIGDNVVATE  599
            KIV+LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D++ + +
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

478) VVMO6_02764 in NC_014965


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  280 bits (1046),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 216/516 (42%), Positives = 341/516 (67%), Gaps = 29/516 (5%)

Query  68   LGLYRAVLRYLTFHALTVVVLGALISALSITTFAYFFNAEVPRTVPVIYMTFLA--LLCG  125
            ++LY+    Y +   L ++V +   S ++   +  +F  + P  + + ++T +   LL G
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAP-FLRLYFITWMMHLLLIG  120

Query  126  GARMM----VRSLIVQASRKGCERVLIYGAGSTGRQLAIALRNAETYQVKG---FIDNDP  178
            G+R+      +++I + ++K     LI G+G  G  L   + N+  Y        +D+D+
Sbjct  121  GSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLVVDDDS  177

Query  179  SLEN-TIIQGLTVHSS-QQISSLVEKQEIEKILLAMPRATRSERKAIIDGLLHLPVEVLT  236
            + ++ +I  G+ V++  ++I+ LV K +I KI++A+P  ++   + I        VEV+ 
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  237  VPDFKDIVNGNATVDELKDVAIEDLLGRDPVEPNPELMKANIHGKVVMVTGAGGSIGSEL  296
            +P++ ++++G+  V+ LK V +EDLLGRDPVE +   +  ++  K ++VTGAGGSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  297  CRQIVRQKPKTLILFELSEYGLYEIDKELSGMVEAMQLEVEIIPLLGSVQRINRLSATMR  356
            CRQ+ +  P  ++L+  +E ++Y+I++EL G+      E+E+IP+++ VQ  +R+   M+
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMKKVMQ  354

Query  357  AFGVQTVYHAAAYKHVPLVEYNVVEGVRNNVFGTYYSAKAAIEAGVESFVLISTDKAVRP  416
            A+    VYHAAA KHVPL+EYN  E+++NNV+GT  +A AA  A V  FV++STDKAV P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  TNVMGTSKRMaelalqalaaKENDKVNGTRFCMVRFGNVLGSSGSVIPLFKRQIEEGQAI  476
             NVMG+SKR+AE+ +Q++    N+  + T F  VRFGNVLGS GSVIPLFK+QIE G ++
Sbjct  415  PNVMGASKRVAEMVIQSM----NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPV  470

Query  477  TVTHPDIIRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGEPVKIVDLAKNLIQLSGLEVK  536
            TVTHP++ RYFMTIPEA++LV+QAGA++ GG++FVLDMG PVKIVDLAKNLI+LSG    
Sbjct  471  TVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK--  528

Query  537  SSDNPNGDIEIKFTGLRPGEKLYEELLIGDNVEGTD  572
                 + DI I F+G+R+GEKL+EELL  D+++  +
Sbjct  529  -----EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

479) PSJM300_08115 in NC_018177


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  279 bits (1045),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 209/485 (44%), Positives = 320/485 (66%), Gaps = 38/485 (7%)

Query  99   FNYWWLSLVLIGGLRLVMRQYFMGDWFSPDSLMKFKGRDASLPKVAVYGAGAAGNQLVAA  158
            F  W + L+LIGG RL  R Y             F ++++      + G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  159  LRLGR--AMRPVAFIDDDPNLFNRTIA-GLRVYSP-KHIQQMIDETGADEILLAIPSASR  214
            +      +M PV  +DDD+N  + +IA G++V +  K+I +++       I++AIP+ S+
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  215  GRRREVLETLEPYPLHVRSVPGFMDLASGRVKVEDIQEVDIADLLGRDAVPPQQALFEQC  274
             R RE+    E   ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  + A + + 
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  275  IIDKVVMVTGAGGSIGSELCRQILANKPRTLLLFEHSEFNLYSIHIELERTIERASLPVR  334
            + +K ++VTGAGGSIGSE+CRQ+    P  ++L+ H+E ++Y IH EL   I      + 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL---IGLYKEEIE  335

Query  335  LVPIMGSIRNPERLLDVMRTWQVETIYHAAAYKHVPMVEHNVAEGVLNNVLGTMNTAQAA  394
            ++PI++ +++ ER+  VM++ +   +YHAAA KHVP++E N  E++ NNVLGT NTA+AA
Sbjct  336  VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  395  VQAGVANFVLISTDKAVRPTNVMGSTKRVAEMILQALSRETAPVLFGADDAVHHVNKTRF  454
              A V++FV++STDKAV P NVMG++KRVAEM++Q+++ ET+              KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDF  441

Query  455  TMVRFGNVLGSSGSVIPRFYQQIRNGGPVTVTHPKITRYFMTIPEAAQLVIQAGSMGQGG  514
              VRFGNVLGS GSVIP F +QI  GGPVTVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  515  DVFVLDMGQPVKIAELAEKLIHLSGLSVRSEKSPHGDIAIEFTGLRPGEKLYEELLIGDN  574
            ++FVLDMG+PVKI +LA +LI+LSG         + DI+IEF+G+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  575  VSATE  579
            + + +
Sbjct  555  IHPEQ  559

480) Echvi_0060 in NC_019904


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  279 bits (1044),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 192/458 (42%), Positives = 317/458 (70%), Gaps = 16/458 (3%)

Query  132  YLKKKQPQKHIVIFGAGEAGRL-SKTVLGSQVGSNQKIHAFLDDDMQKAGGSIGGIPVYH  190
            ++ K   +K  +I G+G +G L  + ++ +   + + +    DD  ++  +  +G+ V  
Sbjct  133  FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQG  192

Query  191  GLDRLKTLQRDHAISDLLISIMCISPRRKKEIIEECLQLGIKVSVVPSIDEWVKGGFNVG  250
             +  +  L +   I  ++I+I  +S +R +EI   C    + V  +P+I++ + G ++V 
Sbjct  193  CIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVN  252

Query  251  KIRQIKIEDLLSRPEISLDNPAVFSQISDRVVMVTGAAGSIGSELCRKIIEHKPALLIMV  310
            K++++ +EDLL+R  + LD +++  +++++ ++VTGA+GSIGSE+CR++    P  ++++
Sbjct  253  KLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLL  312

Query  311  DKAESALYDVEQEFRSGRWKSQIK--PILADIRDAKKMDRIFKMYKPAIVYHAAAYKHVP  368
            + +E+++Y+++QE+  G  K +I   PI+AD++D  +M ++ + YKP +VYHAAA KHVP
Sbjct  313  GHGENSIYHIHQEL-IGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVP  371

Query  369  MMENYPEEAVTSNVLATKNLADLSVLHNVSQFVFVSTDKAVNPTNVMGASKRIAEIYIQA  428
            +ME  P+EA+ +NVL+T+N A+ + L +VS+FV VSTDKAVNP NVMGASKR+AE+ IQ+
Sbjct  372  LMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQS  431

Query  429  LSRYLDVEKGQVTKFAITRFGNVLGSNGSVIPLFKKQIEQGGPVMVTDPNISRYFMTISE  488
            ++   +  K   T F   RFGNVLGS GSVIPLFKKQIE GGPV VT+P ++RYFMTI+E
Sbjct  432  MNN--ETSK---TDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPE  486

Query  489  ACQLILEAGAMSTGNEIFIFDMGEPVKILDLAKKMIQLSDKKIGEDIKIVFTGLREGEKL  548
            A +L+L+AGA++TG EIF++DMG PVKI+DLAK++I+LS+ K  EDI I F+G+R GEKL
Sbjct  487  ASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKL  545

Query  549  HEELL----CHSEQL-QITHHPKIRVVKMGDMAFSKVN  581
             EELL     H+EQ+ +   + K++ +   ++ ++K++
Sbjct  546  FEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL-YNKID  582

481) Nmul_A0631 in NC_007614


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  279 bits (1044),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 226/544 (42%), Positives = 346/544 (64%), Gaps = 57/544 (10%)

Query  63   FGLYRGLWHYASLPDLRRILFavsasaaavPLVLYMLQILVGVPRTVLILAP-ILLLFIM  121
            F+LY+  W+YAS+++L  IL+  S +++ V+  + +  +    P   L +   ++ L+++
Sbjct  62   FDLYHRAWEYASVSEL--ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  122  GSSRLAYRFWKEHR-LYGRSKTGGNLVLVIGASDAAVGLVKELARNVEWRVAGFL--DDD  178
            G+SRL+   W+  R  +       +  L++G++ ++  L++++       +   L  DDD
Sbjct  120  GGSRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  179  PAKRGLML-HGFKVLGRINDLPEVARKLGVAHAIIALTSSASDRRKSYRTHSdrrrpdrl  237
            + K+ + +  G KV G I+D+PE+ +K+ +   IIA+ + + +R +      +       
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGT-----  231

Query  238  lrdrrralqlcaaaGVKALIVPSYNDLVSGNIKVSQIRTVEPEDLLGRDPVVLDNDGLHD  297
                           V  + +P+ ++++SG+I V++++ VE EDLLGRDPV LD  ++  
Sbjct  232  --------------NVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISK  277

Query  298  LLTGKTVLVTGAGGSIGSELCRQIVKFAPAQLVLFELNEFALYSIEQEFQADF-PEIPMI  356
             LT KT+LVTGAGGSIGSE+CRQ+ KF+P +++L+   E ++Y I+QE+ + +  EI +I
Sbjct  278  ELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVI  337

Query  357  FAIGDVKDEARLSQVFLQYRPAIVFHAAAYKHVPLMEQENAWQAVLNNVRGTYVLAQTAI  416
              I+DV+D  R+ +V   Y+P +V+HAAA KHVPLME  N+ +A+ NNV GT   A++A 
Sbjct  338  PIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEY-NPQEAIKNNVLGTRNTAEAAK  396

Query  417  RYGVEKFVLISTDKAVNPTNVMGASKRLAEMVCQALQQSIASPDSPTENASGKIVLGSRL  476
               V KFV++STDKAVNP NVMGASKR+AEMV Q++++  +  D                
Sbjct  397  LAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD----------------  440

Query  477  ERRQEPRFVMVRFGNVLGSAGSVIPKFREQIEKGGPITVTHSEITRYFMSIPEAAQLVLQ  536
                   FV VRFGNVLGS GSVIP F+ QIE GGP+TVTH+ +TRYFM+IPEA++LVLQ
Sbjct  441  -------FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQ  493

Query  537  AGLMGGKRRGGEIFVLDMGEPIKIADLARDLIRLSGLSEDEIKIVYNGLRPGEKLYEELL  596
            AG ++    GGEIFVLDMG P+KI DLA++LIRLSG  E++I I ++G+R+GEKL+EELL
Sbjct  494  AGALAT---GGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  597  ADDE  600
              DE
Sbjct  551  NKDE  554

482) H681_23275 in NC_020829


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  279 bits (1044),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 200/479 (42%), Positives = 321/479 (68%), Gaps = 29/479 (6%)

Query  140  RTDVARGDGRIRVAIYGAGAAGNQLVAALRMGRTLL---PVAFIDDDSSIAG-RVISGLQ  195
            R      +G+ + ++  +G+ G  L+    M    +   PV  +DDDS+     + SG++
Sbjct  130  RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVK  189

Query  196  VYKP-KHIAQLIDETAASEVLLAIPSASRGRRREMLGMLEAYPLHVRSVPGVTDLASGKV  254
            V    K+I++L+       +++AIP+ S+ R RE+  + E+  ++V  +P + ++ SG +
Sbjct  190  VQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEI  249

Query  255  KVDDLQEVDIADLLGRDAVPPQQALFERCIKQQSVLVTGAGGSIGSELCRQILSSGARVL  314
             V+ L+ V++ DLLGRD+V  + A + + + ++++LVTGAGGSIGSE+CRQ+    +  +
Sbjct  250  EVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRI  309

Query  315  ILFEHSEFNLYSIHSELERRIVRESLKIQLVPILGSIRNPVRLHDVLRTWQVNTVYHAAA  374
            +L+ H+E ++Y IH EL   + +E   I+++PI++ +++  R+  V+++ +   VYHAAA
Sbjct  310  MLLGHGENSIYHIHQEL-IGLYKEE--IEVIPIIADVQDKERMKKVMQAYKPYVVYHAAA  366

Query  375  YKHVPMVEHNIAEGVLNNLLGTLYTAQSAIKAGVANFVLISTDKAVRPTNVMGSTKRLAE  434
             KHVP++E N  E++ NN+LGT  TA++A  A V++FV++STDKAV P NVMG++KR+AE
Sbjct  367  HKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE  426

Query  435  MVLQALSREAAPALYGDDSVHQVNKTRFTMVRFGNVLGSSGSVIPLFREQIKRGGPLTVT  494
            MV+Q+++ E++             KT F  VRFGNVLGS GSVIPLF+ QI  GGP+TVT
Sbjct  427  MVIQSMNNETS-------------KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  495  HPNITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGCSVKIVDLAEKMIRLSGLSVRSES  554
            HP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG +VKIVDLA ++IRLSG       
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-----  528

Query  555  NPHGDICIEFSGLRPGEKLYEELLIGDNVQPTE-HPMIMRADEEYLSWDVLKERLGALL  612
              + DI IEFSG+R+GEKL+EELL  D+++P +    I R+  + +  + L ++++ +L
Sbjct  529  --EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

483) M634_03175 in NC_021847


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  279 bits (1045),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 211/520 (41%), Positives = 342/520 (66%), Gaps = 38/520 (7%)

Query  65   FARL-GLYRAVLRYLTFQALFVVA---AGAVISATLVAALSFYMSDPFPRTVPIIYGAFL  120
            FA++ +LY+    Y +   L+++    +++++++ ++ ++ F    PF R   I     L
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPI-FTQQAPFLRLYFITWMMHL  116

Query  121  ALFCGGP---RVIVRSLVAQSYSTQSKEVLIYGAGSGGRQLAMALRSSGDYRV--RAFID  175
             L+ G+    R+  ++++++    + K  LI G+G GG  L   + ++  Y      ++ 
Sbjct  117  LLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLVV  173

Query  176  GDSTLCNTMILGLPVIA---IEDAMPIINKYDVSQVLLAVPSAKRSRRKVILDELAKL--  230
            +D +  + M ++  V     I D   +++K+++ ++++A+P+  + R    L E+ KL  
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR----LREINKLCE  229

Query  231  --PVEVLTVPDMTDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTGA  288
               VEV+ +P++ +++SG   ++ LK V +EDLLGRDPV  +   +  ++ +K ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  289  GGSIGSELCRQIVEQSPKSIILFELSEFGLYQIDRELNQLKIEKGLTCDIIPLLGSVQRQ  348
            GGSIGSE+CRQ+   +P  I+L+  +E ++Y+I++EL  L  E     ++IP+++ VQ +
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDK  346

Query  349  HRLETTMSSFKVQTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVLI  408
            +R+   M ++K   VYHAAA KHVPL+E+N  E+++NN+ GT  TA AA  A V  FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  409  STDKAVRPTNVMGTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFKK  468
            STDKAV P NVMG++KR+AE+ +Q++ ++E +K +   F  VRFGNVLGS GSVIP+FKK
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSM-NNETSKTD---FVAVRFGNVLGSRGSVIPLFKK  462

Query  469  QIASGGPVTVTHPEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLACNLI  528
            QI +GGPVTVTHP +TR+FMTIPEA++LV+QAGA++ GG++FVLDMG +VKI DLA NLI
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  529  QLSGLEVKSEANPHGDIEIQFSGLRPGEKLYEELLIGDNV  568
            +LSG         + DI I+FSG+R+GEKL+EELL  D++
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

484) PSPPH_3656 in NC_005773


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  279 bits (1044),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 219/534 (42%), Positives = 348/534 (66%), Gaps = 40/534 (7%)

Query  70   FGMYRAVMRYFGNDALIAIIKAVTMSSLILGCMVYVYSNHQQLVPRSVIFNYWWLSMVMI  129
            F++Y+    Y +   LI I+K+VT S +  G +V +++++  ++   + F  W + +++I
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHLLLI  119

Query  130  GGLRLAMRQYFLGDWFAAAQHVPFAKSDNGLQKVAIYGAGAAGNQLVAALRMGRLM--HP  187
            GG RL+ R Y          +  F   +   +   I G+G +G+ L+  +     M  +P
Sbjct  120  GGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  188  VAFIDDDESISN-RVISGLQVYKP-RNIQRMIDSTGAQEILLAIPSSSRGRRREILGFLE  245
            V  +DDD +  +  + SG++V    ++I  ++     + I++AIP+ S+ R REI  + E
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  246  GFPLHVRSVPGFMDLAAGRVKVDDLQEVDIADLLGRDAVPARDNLLEHCIKGKTVLVTGA  305
            G  ++V  +P + ++ +G + V+ L+ V++ DLLGRD+V      +   +  KT+LVTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  306  GGSIGSELCRqilllqptqllllDHSEFNLYSILTELEQRAARESLSVKLLPILGSVRNH  365
            GGSIGSE+CRQ+  + P +++LL+H+E ++Y I  EL      E   + ++PI++ V++ 
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDK  346

Query  366  PKLLSIMKTWKVDTVYHAAAYKHVPMVEHNIAEGVINNVVGTLNTAQAALQAGVSNFVLI  425
             ++  +M++ K   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA  A VS+FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  426  STDKAVRPTNVMGSTKRLAELILQALSRETAPVIFGDKANVYQVNKTRFTMVRFGNVLGS  485
            STDKAV P NVMG++KR+AE+++Q+++ ET+              KT F  VRFGNVLGS
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDFVAVRFGNVLGS  452

Query  486  SGSVIPLFHKQIQSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGHGGDVFVLDMGEPV  545
             GSVIPLF KQI++GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG++FVLDMG PV
Sbjct  453  RGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPV  512

Query  546  KIVELAEKMIHLSGLSIRSEKNPQGDISIEFTGLRPGEKLYEELLIGDNVVATE  599
            KIV+LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D++ + +
Sbjct  513  KIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

485) BLASA_0347 in NC_016943


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  279 bits (1043),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 204/498 (41%), Positives = 333/498 (67%), Gaps = 19/498 (3%)

Query  88   WRYASVVEARRVLVAGGAATLIMVAIDLVPRFVP----LTVALVSGLVATMFVGLARFQT  143
            W YASV E   +L+  + ++ I+ +  +VP F      L + +++ ++  +++G +R+  
Sbjct  69   WEYASVSEL--ILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRLSW  126

Query  144  RLVSFRRRSEQAEADTGMRVLVIGAGRTGAELIRQMQTHGHTGLLPVAVLDNDA-RTWgr  202
            R+  +R+     E+      L++G+GR G+ LIRQM      G+ PV V+D+D+ +    
Sbjct  127  RI--YRKTFISKEGKK-KPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMS  183

Query  203  llsgvrvlgglsELPRLLAELDVHQIVLADPETPTAVVERIAGLADDSGVVLRVLPGGDE  262
            + SGV+V G + ++P L+  +++ +I++A P  +   +  I  L +++ V +  +P  ++
Sbjct  184  IASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIEN  243

Query  263  LVRSGLRLQDVRDLRIDDLLGREPVGTDLVRIASMLQGRRVLVTGAGGSIGSEICRQVAR  322
            ++ + + ++ ++ + ++DLLGR+PV  D+  I+  L  + +LVTGAGGSIGSEICRQV +
Sbjct  244  VMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCK  303

Query  323  CAPERLVLLDHDET---HLHDALATL---PPTAVPELVDIRDAERLNRAFARHRPDVVFH  376
             +P+R++LL+H+E    H+H+ L  L       +P + D++D ER+++     +P VV+H
Sbjct  304  FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYH  363

Query  377  AAAHKHVPMLETAPSEavmtnvvgtgnvvaaaaavDVPSLVLISTDKAVRPSSVMGASKS  436
            AAAHKHVP++E  P EA+  NV+GT N   AA   +V+ +V++STDKAV P++VMGASK 
Sbjct  364  AAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKR  423

Query  437  VAEDLVLTSARNSGRA-WCGVRFGNVLGSRGSVIPTFSRQIQAGGPVTVTDARMTRYFMT  495
            VAE ++ +   +++++   +VRFGNVLGSRGSVIP F +QI+AGGPVTVT++ MTRYFMT
Sbjct  424  VAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMT  483

Query  496  IPEAVQLVLQAAAMSRGGELFMLEMGQPVSIIDLAHRMIRLSGRRPGTDVEIRISGTRPG  555
            IPEA +LVLQA+A++ GGE+F+L+MG+PV I+DLA  +IRLSG +   D+ I +SG R+G
Sbjct  484  IPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSG  542

Query  556  EKLHEELSIPEEGARPTE  573
            EKL EEL +  +  +P +
Sbjct  543  EKLFEEL-LNKDEIHPEQ  559

486) PSEEN1506 in NC_008027


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  278 bits (1042),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 205/485 (43%), Positives = 320/485 (66%), Gaps = 38/485 (7%)

Query  119  FNYWWLSLVMVGGLRLAMRQYFLGDWFTAAQHMPFTSRDNGLPKVAIYGAGSAGNQLVAA  178
            F  W + L+++GG RL+ R Y          +  F S++       I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  179  LRLG--KAMRPVAFIDDDDNIAN-RVISGLQVYKP-KHLQQMIDHTGAEEVLLAIPSVSR  234
            +      +M PV  +DDD N  +  + SG++V    K++ +++       +++AIP++S+
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  235  GRRREILGFLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQEGLLQRC  294
             R REI  + EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  + + + + 
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  295  NTDLVVMVTGAGGSIGSELCRQILSLKPRTLLLFEHSEFNLYSILSELEQRVARESLPTR  354
             T+  ++VTGAGGSIGSE+CRQ+  + P  ++L+ H+E ++Y I  EL   + +E +   
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIE--  335

Query  355  VLPILGSVRNQSQLVDIMRTWRVDTVYHAAAYKHVPMVEHNIAEGVLNNVMGTLYTAQAA  414
            V+PI++ V+++ ++  +M++ +   VYHAAA KHVP++E N  E++ NNV+GT  TA+AA
Sbjct  336  VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  415  LQAGVANFVLISTDKAVRPTNVMGSTKRLAEMTLQALSREVAPVLFGDSGNVSQVNKTRF  474
              A V++FV++STDKAV P NVMG++KR+AEM +Q+++ E +              KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDF  441

Query  475  TMVRFGNVLGSSGSVIPLFHKQIKAGGPLTVTHPKITRYFMTIPEAALLVIQAGSMGQGG  534
              VRFGNVLGS GSVIPLF KQI AGGP+TVTHP +TRYFMTIPEA+ LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  535  DVFVLDMGEPVRIVELAEKMIHLSGLSIRSERNPHGDISIEFSGLRPGEKLYEELLIGDN  594
            ++FVLDMG PV+IV+LA ++I+LSG         + DI+IEFSG+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  595  VAATQ  599
            + + Q
Sbjct  555  IHPEQ  559

487) VP0235 in NC_004603


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  278 bits (1040),  Expect = 8e-76, Method: Compositional matrix adjust.
 Identities = 212/520 (41%), Positives = 342/520 (66%), Gaps = 38/520 (7%)

Query  65   FARL-GLYRAVLRYLTFQALFVVA---AGAVISATLVAALSFYMSDPFPRTVPIIYGAFL  120
            FA++ +LY+    Y +   L+++    +++++++ ++ ++ F    PF R   I     L
Sbjct  58   FAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPI-FTQQAPFLRLYFITWMMHL  116

Query  121  ALFCGGP---RVIVRSLIAQSYSTQSKEVLIYGAGSGGRQLAMALRSSGDYRV--RAFID  175
             L+ G+    R+  +++I++    + K  LI G+G GG  L   + ++  Y      ++ 
Sbjct  117  LLIGGSRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLVV  173

Query  176  GDSTLCNTMILGLPVIA---IEDAMPIINKYDVSQVLLAVPSAKRSRRKVILDELAKL--  230
            +D +  + M ++  V     I D   +++K+++ ++++A+P+  + R    L E+ KL  
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR----LREINKLCE  229

Query  231  --PVEVLTVPDMTDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTGA  288
               VEV+ +P++ +++SG   ++ LK V +EDLLGRDPV  +   +  ++ +K ++VTGA
Sbjct  230  GTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGA  289

Query  289  GGSIGSELCRQIVEQSPKSIILFELSEFGLYQIDRELNQLKLEKGLTCDIIPLLGSVQRQ  348
            GGSIGSE+CRQ+   +P  I+L+  +E ++Y+I++EL  L  E     ++IP+++ VQ +
Sbjct  290  GGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDK  346

Query  349  HRLETTMSSFKVQTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVLI  408
            +R+   M ++K   VYHAAA KHVPL+E+N  E+++NN+ GT  TA AA  A V  FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  409  STDKAVRPTNVMGTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFKK  468
            STDKAV P NVMG++KR+AE+ +Q++ ++E +K +   F  VRFGNVLGS GSVIP+FKK
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSM-NNETSKTD---FVAVRFGNVLGSRGSVIPLFKK  462

Query  469  QIASGGPVTVTHPEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLACNLI  528
            QI +GGPVTVTHP +TR+FMTIPEA++LV+QAGA++ GG++FVLDMG +VKI DLA NLI
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  529  QLSGLEVKSDANPHGDIEIQFSGLRPGEKLYEELLIGDNV  568
            +LSG         + DI I+FSG+R+GEKL+EELL  D++
Sbjct  523  RLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

488) GNIT_2482 in NC_016041


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  278 bits (1039),  Expect = 9e-76, Method: Compositional matrix adjust.
 Identities = 214/516 (42%), Positives = 343/516 (67%), Gaps = 31/516 (6%)

Query  44   LLSVGGARLLVRALVTQFTGLN--KLPVVIYGAGSAG----RQLATGIATGLEFYVSAFI  97
            LL +GG+RL  R     F + +  K P +I G+G +G    RQ+      G+E      +
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGME--PVLVV  173

Query  98   DDDKSKHG-SVIQGVPVIS-LFELKSLVEAGKATKVLLALPSASRSERNRVINSL-EKYQ  154
            DDD +K+  S+  GV V + + ++  LV   +  K+++A+P+ S+ +R R IN L E  +
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEGTN  232

Query  155  VQVQTIPGIKDVIEGNINPAEFVDVEIEDLLGREPVIPLPQLMAQNITAKNVMVSGAGGS  214
            V+V  +P I +V+ G+I+   +  VE+EDLLGR+PV      +++++T K ++V+GAGGS
Sbjct  233  VEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGS  292

Query  215  IGAELCRQIIKFKPTTLVLLELSEFALYEIEKELSEYITKNGLKIKLYPLLGSVQHINRV  274
            IG+E+CRQ+ KF P  ++LL  +E ++Y+I++EL      +   I + P+++ VQ+ +R+
Sbjct  293  IGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEE---IEVIPIIADVQDKERM  349

Query  275  ENVMRAFNINTIYHAAAYKHVPLVEHNVVEGIRNNVFGTYYaaraainagaETFVLVSTD  334
             +VM+A++   +YHAAA KHVPL+E N  E+I+NNV+GT  +A AA  A    FV+VSTD
Sbjct  350  KKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTD  409

Query  335  KAVRPTSVMGASKRMAELVLQALSQASFNKNTRFCMVRFGNVLGSSGSVLPLFRRQIKEG  394
            KAV P +VMGASKR+AE+V+Q++++ +   +T F  VRFGNVLGS GSV+PLF++QI  G
Sbjct  410  KAVNPPNVMGASKRVAEMVIQSMNNET--SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  395  GPITLTHEDITRYFMTNSEAAQLVIQAGAMGKGGDVFVLDMGDSVKIKDLAEKLIRLSGL  454
            GP+T+TH ++TRYFMT +EA++LV+QAGA++ GG++FVLDMG +VKI DLA +LIRLSG 
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  455  EIKDDSNPNGDISIEYTGLRPGEKLFEELLIGDNVH-DTFHERIMTANEAMLTWQDLEPM  513
                    + DI+IE++G+R+GEKLFEELL  D++H +   E+I  ++   +  ++L   
Sbjct  528  K-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNK  580

Query  514  LDELEQMCHNFDHEGIREILLNAPTGFNPSDGICDL  549
            +D++      + +E++R+ ++      + ++  C +
Sbjct  581  IDDF------LINESVRDEIIFFVNNNKTGEEKCKM  610

489) VS_0234 in NC_011753


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  278 bits (1040),  Expect = 9e-76, Method: Compositional matrix adjust.
 Identities = 220/549 (41%), Positives = 354/549 (65%), Gaps = 44/549 (8%)

Query  64   IFTKI-GLYRAVLRYLTFQALFV----VTSGAILSALALAVFAYYLQEPIPRTVPIIYGA  118
            +F++I +LY+    Y +   L++    VTS+ + +++ +++F+   Q P+ R   I    
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPFLRLYFITWMM  114

Query  119  YLALLCGGSRLV----VRNLVATTSKDPREEVLIYGAGSGGRQLAVALRASENYR--IRA  172
             L LL GGSRL      + +++  +K  +   LI G+G GG  L   +  +  Y      
Sbjct  115  HL-LLIGGSRLSWRIYRKTFISKEGK--KKPTLIVGGGRGGSLLIRQMMNT-PYMGMEPV  170

Query  173  FIDEDKTLINTMILGLPV-IE--LDKSETLINKYATSKILLAIPSASRARRKQVLDLLAP  229
            ++ +D +  + M ++  V ++  +     L++K+   KI++AIP+ S+ R +++  L   
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG  230

Query  230  LPVEIQTVPDMADIVSGKAKIDELTDVPIEDLLGRDAVTPQQVLMEANIKGKVVMVTGAG  289
              VE+  +P++ +++SG   ++ L  V +EDLLGRD+V  +   +  ++  K ++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  290  GSIGSELCRQILKQQPKTLVLFEVSEFGLYQIDREL-SLISENEGYDIDIVPLLGSVQRP  348
            GSIGSE+CRQ+ K  P  ++L+  +E ++Y+I++EL +L  E    +I+++P+++ VQ  
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE----EIEVIPIIADVQDK  346

Query  349  HRLLTSMKSFGVQTVYHAAAYKHVPLVEYNVVEGVRNNIYGTYYTANAAIEAGVESFVLI  408
            +R+   M+++    VYHAAA KHVPL+EYN  E+++NN+ GT  TA+AA  A V  FV++
Sbjct  347  ERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMV  406

Query  409  STDKAVRPTNVMGTTKRMAELGLQALAQQENPKESGTRFCMVRFGNVLGSSGSVIPLFKK  468
            STDKAV P NVMG++KR+AE+ +Q++ ++ +  +    F  VRFGNVLGS GSVIPLFKK
Sbjct  407  STDKAVNPPNVMGASKRVAEMVIQSMNNETSKTD----FVAVRFGNVLGSRGSVIPLFKK  462

Query  469  QIKAGGPLTVTHPDITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLAENLI  528
            QI AGGP+TVTHP++TR+FMTIPEA++LV+QAGA++ GG++FVLDMG +VKI DLA NLI
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  529  RLSGLSVKNEDNQHGDIEIKFSGLRPGEKLYEELLIGDNV-ARTAHERI-------MTAQ  580
            RLSG        ++ DI I FSG+R+GEKL+EELL  D++ +    E+I       +  +
Sbjct  523  RLSGY-------KEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

Query  581  EVFLPIDEY  589
            E++  ID++
Sbjct  576  ELYNKIDDF  584

490) pglF in NC_009850


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  277 bits (1036),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 208/487 (43%), Positives = 323/487 (67%), Gaps = 24/487 (4%)

Query  99   FIDLIFYTFIINILVY-----VYKYYHS--VGKNKKTKSLVIYGAGKAGLQLQREFLNSE  151
            F+ L F T ++++L+        + Y+   ++K+ K K+ +I G+G++G  L R+ +N+ 
Sbjct  104  FLRLYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP  163

Query  152  Y---KLVCFIDDDEILHHRSI-DGISIYS-KEKYCSLFENQKFDLMIIAMPSASQEQIKI  206
            Y     V  +DDD   +  SI  G+ + +       L  + ++  +IIA+P+ SQ++++ 
Sbjct  164  YMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLRE  223

Query  207  IYEFMQDKFEKIKILPSMNNILKKEEFTKQLKDIGVEDLLARYPKDLDKKQIENFIKDKI  266
            I  + ++    +  +P+++N++  E   ++LK + VEDLL+R P +LD   I + + +K 
Sbjct  224  INKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKT  283

Query  267  VLITGAGGSIGSEISRQ-CKVYGAKQLILLDHSEFNLYSILEELKG-----ENVVPIMQS  320
            +L+TGAGGSIGSEI RQ CK + + +++LL+H+E ++Y I +EL G      +V+PI+  
Sbjct  284  ILVTGAGGSIGSEICRQVCK-FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIAD  342

Query  321  VRDIKALESTFEKYKPQIVIHAAAYKHVPLVEYNILEGITNNIIGTKNCIDLSIKYGAQK  380
            V+D   +    + YKP +V HAAA KHVPL+EYN  E+I NN++GT+N  + +      K
Sbjct  343  VQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSK  402

Query  381  FVLISTDKAVRPTNIMGTTKRICELYAQNV--ESKNTEIVAVRFGNVLGSSGSVIPKFKS  438
            FV++STDKAV P N+MG++KR+ E+  Q++  E+ +T++VAVRFGNVLGS GSVIP FK 
Sbjct  403  FVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKK  462

Query  439  QIEQGKNITVTHPEITRYFMLIPEACELVLQAASIGKGGEIFILDMGEPIRIVDLAKKMI  498
            QIE G  +TVTHP +TRYFM IPEA  LVLQA++++ GGEIF+LDMG P++IVDLAK++I
Sbjct  463  QIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLI  522

Query  499  ELSG--RNDINIEFCGLRLGEKLYEELLINDSDQKTK-YESITVANSTKFYIKELNKKIE  555
             LSG   +DI IEF G+R GEKL+EELL +D  +  + YE I  ++  K+   EL +KI+
Sbjct  523  RLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKID  582

Query  556  ELLICED  562
            ++LI E 
Sbjct  583  DFLINES  589

491) Rmag_0886 in NC_008610


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  277 bits (1038),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 210/504 (42%), Positives = 338/504 (68%), Gaps = 22/504 (4%)

Query  67   FGLYHGIVRFLGLQALWSVIKAVSLYALIWGVVGFITAVEGIPRSVILINGLLAIMAIGG  126
            F+LYH    + ++  L  ++K+V+   +  G++  I + ++    + +I  ++ ++ IGG
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGG  121

Query  127  LRMLARWALSDVGTFLKNS--KKNVIIYGAGAAGRQLSEALLQSKEY---KPVAFIDDAK  181
             R+   W +    TF+ +   KK  +I G+G +G  L   ++++  Y    PV  +DD  
Sbjct  122  SRL--SWRIYR-KTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLVVDDDS  177

Query  182  DLNKQYI-NGVKVYG-TKHIELLIYKYSVNEILLALPSVSRQRRNEIINLLESYPVLVRI  239
            + +K  I +GVKV G  K+I  L+ K++++ I++A+P++S+QR  EI +L E+  V V  
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  240  LPGVSALAQGQVKVDDLRDVSIGELLGREPISPNQSLLEVNIKNKVVMITGAGGSIGSEL  299
            +P +  +  G++ V+ L+ V + +LLGR+P+  + + +  ++ +K +++TGAGGSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  300  CRQVISLGVSKLILFEQSELVLYTIDKEL----SDSAKVFPILGSVVDQDRVERVCKQFK  355
            CRQV  +   +++L+ ++E  +Y I++EL     +   V+PI++ V D++R+ +V + +K
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  356  VQTVYHAAAYKHVPMVEFNHTEGVMNNIFGTLNCAQAAINNKVETFVLISTDKAVRPTNT  415
               VYHAAA KHVP++E+N  E++ NN++GT N A+AA    V  FV++STDKAV P N 
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  416  MGATKRCAEMVLQALSKCQSDTRFSIVRFGNVLDSSGSVIPLFKKQIKEGGPVTVTDKEI  475
            MGA+KR AEMV+Q++++  S T F  VRFGNVL+S GSVIPLFKKQI  GGPVTVT+  +
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  476  VRYFMTISEAVALVIQAGAMGSGGDVFVLDMGKSVRIYDLALKMIHLTGLELKDETNLNG  535
             RYFMTI+EA  LV+QAGA+++GG++FVLDMGK+V+I DLA ++I+L+G   K+E     
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG--YKEE-----  530

Query  536  DIEIKITGLRPGEKLFEELLIDDN  559
            DI I ++G+R+GEKLFEELL  D+
Sbjct  531  DIGIEFSGIRSGEKLFEELLNKDE  554

492) VV1_0775 in NC_004459


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  277 bits (1036),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 207/460 (45%), Positives = 315/460 (69%), Gaps = 26/460 (5%)

Query  122  LLCGGARMM----VRSLIVQASRKGCERVLIYGAGSTGRQLAIALRNAETYQVKG---FI  174
            LL GG+R+      +++I + ++K     LI G+G  G  L   + N+  Y        +
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGKK--KPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLVV  173

Query  175  DNDPSLEN-TIIQGLTVHSS-QQISRLVEKQEIEKILLAMPRATRSERKAIIDGLLHLPV  232
            D+D++ ++ +I  G+ V++  ++I+ LV K +I KI++A+P  ++   + I        V
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  233  EVLTVPDFKDIVNGNATVDELKDVAIEDLLGRDPVEPNPELMKANIHGKVVMVTGAGGSI  292
            EV+ +P++ ++++G+  V+ LK V +EDLLGRDPVE +   +  ++  K ++VTGAGGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  293  GSELCRQIVRQKPKTLILFELSEYGLYEIDKELSGMVEAMQLEVEIIPLLGSVQRINRLS  352
            GSE+CRQ+ +  P  ++L+  +E ++Y+I++EL G+      E+E+IP+++ VQ  +R+ 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMK  350

Query  353  ATMRAFGVQTVYHAAAYKHVPLVEYNVVEGVRNNVFGTYYSAKAAIEAGVESFVLISTDK  412
              M+A+    VYHAAA KHVPL+EYN  E+++NNV+GT  +A AA  A V  FV++STDK
Sbjct  351  KVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDK  410

Query  413  AVRPTNVMGTSKRMaelalqalaaKENDKVNGTRFCMVRFGNVLGSSGSVIPLFKRQIEE  472
            AV P NVMG+SKR+AE+ +Q++    N+  + T F  VRFGNVLGS GSVIPLFK+QIE 
Sbjct  411  AVNPPNVMGASKRVAEMVIQSM----NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  473  GQAITVTHPDIIRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGEPVKIVDLAKNLIQLSG  532
            G ++TVTHP++ RYFMTIPEA++LV+QAGA++ GG++FVLDMG PVKIVDLAKNLI+LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  533  LEVKSSDNPNGDIEIKFTGLRPGEKLYEELLIGDNVEGTD  572
                     + DI I F+G+R+GEKL+EELL  D+++  +
Sbjct  527  YK-------EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQ  559

493) HEAR1151 in NC_009138


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  277 bits (1036),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 203/484 (42%), Positives = 332/484 (69%), Gaps = 31/484 (6%)

Query  97   LATFTHTVTLSRGVFGIYWVSAILYVVASRFM----ARGYLLRTNDKSGAIRVAIYGAGH  152
            ++ FT+   + R ++ I W+  +L + +SR+      + ++ +   K  ++ V   G+G+
Sbjct  95   VPIFTQQAPFLR-LYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIV---GGGR  150

Query  153  SGMQLASALRAGSAYL---PVALLDDKKELQGATIA-GVKVWAPDCL---PKLVADKQVQ  205
            +G  L   +   ++Y+   PV ++DD  + Q  +IA GVKV   +C+   P LV   +++
Sbjct  151  GGSLLIRQMM-NTPYMGMEPVLVVDDDSNKQKMSIASGVKV--QGCIKDIPELVKKFNIK  207

Query  206  EILLAMPSLRKAEQKVILERL-EPLKIKIKVTPPIASLINGELRVQDIRDIEIEDLLGRD  264
             I++A+P+L +   + I ++L E  ++ +   P I ++++GE+ V+ ++ +E+EDLLGRD
Sbjct  208  KIIIAIPTLSQQRLREI-NKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRD  266

Query  265  TVEPNAQLLTTCITGKTVLVTGAGGSIGSELCRQiirlkpkrllllDISEFALYTIEQDL  324
             VE +   ++  +T KT+LVTGAGGSIGSE+CRQ+ ++ P R++LL+ +E ++Y I+Q+L
Sbjct  267  PVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL  326

Query  325  RAIEHAHDENIELLPFLGSVLDAEKCERILRTFAVDTIYHAAAYKHVPLVEHNPIQGIRN  384
             ++     E+IE++P+++ V D E+  ++++++    +YHAAA KHVPL+E NP ++I+N
Sbjct  327  IGL---YKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKN  383

Query  385  NAFGTMMLAQAAIAAKVACFVLISTDKAVRPTNVMGTTKRLSELILQGLSRAQSQTRFCM  444
            N +GT   A+AA  A V+ FV++STDKAV P NVMG++KR++E+++Q+++   S+T F  
Sbjct  384  NVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVA  443

Query  445  VRFGNVLGSSGSVVPLFRKQIMAGGPITLTHPEITRYFMTIPEAAQLVLQAGAMGEGGDV  504
            VRFGNVLGS GSV+PLF+KQI AGGP+T+THP +TRYFMTIPEA++LVLQAGA++ GG++
Sbjct  444  VRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEI  503

Query  505  FVLDMGEPVKILDLATRMVHLSGLEVRSASNESSDAIEIRHVGLRPGEKLYEELLIGSNV  564
            FVLDMG PVKI+DLA  +++LSG           + I I   G+R+GEKL+EELL   ++
Sbjct  504  FVLDMGKPVKIVDLAKNLIRLSGY--------KEEDIGIEFSGIRSGEKLFEELLNKDEI  555

Query  565  EGTQ  568
            +  Q
Sbjct  556  HPEQ  559

494) XALc_1597 in NC_013722


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  276 bits (1034),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 214/530 (41%), Positives = 342/530 (65%), Gaps = 18/530 (3%)

Query  68   GLYRGLWRFASVPDLLNIFKASFYGLIAIVLGLAYSRFDAIPLSVLMVYPFA-LSALL--  124
            +LY+  W +ASV++L+ I K+   +++A   G+  + F   + + L +Y ++ +  LL  
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVAT--GIIVPIFTQQA-PFLRLYFITWMMHLLLI  119

Query  125  GAPRLLYRAWKDYQ--IAHSDDTARRVLIVGAGRAAEALVRDLRRSGAYY---PVGFVDD  179
            G++RL   +W+ Y+  +   ++  +  LIVG+GR++  L+R++  + +Y    PV  VDD
Sbjct  120  GGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNT-PYMGMEPVLVVDD  175

Query  180  AGHLHGAKL-QGLPILGRIDEAGEIAKETAAKLLVIAIPSLDAVGMQRVVALCESTGLPF  238
             ++ +   +  G+ + G I +  E+ K    K ++IAIP+L    ++ +  LCE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  239  RTVPRLVDVLEGHYLPGELKEVAIEDLLGRKPVKPDWKLIKGWLSGRTVLVTGAGGSIGS  298
              +P + +V+ G+     LK V +EDLLGR PV  D   I   L+ +T+LVTGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  299  ELCRQCARHGARKVLLLEIDELALITIHADLRRTF-PDLEIDCVLGDCGDPAVIRHAMRV  357
            E+CRQ  +  + +++LL  +E ++  IH +L   +  ++E+  +++D  D   ++  M+ 
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  358  AEPDAVFHAAAYKQVPLLEGQFREAVRNNVLATENVARACVAANVSTFVFISTDKAVNPV  417
              P  V+HAAA K+VPL+E + +EA++NNVL+T N A A   A+VS FV +STDKAVNP 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  418  NVLGASKRYAEMVCQSLDDQAVGTRFVTVRFGNVLDSAGSVVPLFREQIRQGGPVTVTDP  477
            NV+GASKR AEMV QS+++++  T FV+VRFGNVL+S GSV+PLF+ QI  GGPVTVT+P
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  478  QVTRYFMTIPEACQLIVQAAASASRGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGRDIAI  537
             +TRYFMTIPEA +L++QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   DI+I
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGI  534

Query  538  LYTGLRPGEKLHETLFYSDEDYRPTSHPKILEAGVRSFSREDVLRGVQQL  587
             ++G+R+GEKL E L+  DE        KI  + V+ + +E++   ++++
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

495) Dd1591_3389 in NC_012912


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  276 bits (1032),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 198/463 (43%), Positives = 314/463 (68%), Gaps = 26/463 (5%)

Query  142  RQKPNVFIYGAGATGRDLLYALIQGDEY---HPVIILDDDEKKVG-QIICGIKVHHS-GE  196
            ++KP +++  +G+ G  LL   +    Y   +PV+++DDD +K    I  G+KV+    +
Sbjct  139  KKKPTLIV--GGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKD  196

Query  197  FEKLKPLYQPVKLLLAINNIQKGQRLRLLEKLSH-WPIEVQSVPSVEDIAAGKAVATEVR  255
            +  L   ++  K+++AI  + + QRLR ++KL +   +EV  +P++E++ +G      ++
Sbjct  197  IPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLK  255

Query  256  DLDVADLLGRAAVDPDKQLMTKNITGKSVMVTGAGGSIGSELCRQILAQRPCTLVLFELN  315
             ++V DLLGR +V+ D   ++K++T K+++VTGAGGSIGSE+CRQ+    P  ++L+   
Sbjct  256  KVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHG  315

Query  316  EYNLYTIDQELQGIKKRLMLETKIVTALGSVQKQNRVQKLIHTHQVETIYHAAAYKHVPL  375
            E ++Y I+QEL G+ K    E  ++  ++ VQ ++R++K++++ +   +YHAAA KHVPL
Sbjct  316  ENSIYHIHQELIGLYKE---EIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPL  372

Query  376  VEENVIEGIRNNVFGTLACAEAAIAEGVENFTLISTDKAVRPTNIMGTSKRMAELILQAL  435
            +E N  E+I+NNV+GT   AEAA    V +F ++STDKAV P N+MG+SKR+AE+++Q++
Sbjct  373  MEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSM  432

Query  436  AERQNQTTFTMVRFGNVLGSSGSVVPLFKKQIRQGGPVTVTHPDIIRYFMLIPEAAQLVI  495
             +  ++T F  VRFGNVLGS GSV+PLFKKQI  GGPVTVTHP++ RYFM IPEA++LV+
Sbjct  433  NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVL  492

Query  496  QAGAMGMNGQVFVLDMGEPVKILDLARRMINLMGMKSYIEGQGHAEEGDIGIKFTGLRPG  555
            QAGA++  G++FVLDMG PVKI+DLA+ +I L G K          E DIGI F+G+R+G
Sbjct  493  QAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK----------EEDIGIEFSGIRSG  542

Query  556  EKLYEELLIGENVEGTS-HPKIMTAQEEKLSWQEMAQLLDKLD  597
            EKL+EELL  ++++      KI  ++ +K+   E  +L +K+D
Sbjct  543  EKLFEELLNKDEIHPEQVYEKIYRGKVQKI---EKEELYNKID  582

496) capD in NC_015740


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  276 bits (1031),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 216/512 (43%), Positives = 332/512 (65%), Gaps = 40/512 (7%)

Query  123  FNYWWLSLVLIGGLRLVMRQYFMGDWFSPDSTIKFKFKGKDAGLPKVAVYGAGAAGNQLV  182
            F  W + L+LIGG RL         W       +  F +K++      + G+G +G+ L+
Sbjct  109  FITWMMHLLLIGGSRL--------SW----RIYRKTFISKEGKKKPTLIVGGGRGGSLLI  156

Query  183  AALRMGR--AMRPVAFIDDDPNLQNRSIA-GLRVYS-AKHITQMVEETGAAEILLAIPSA  238
              +      +M PV  +DDD+N Q+ SIA G++V +  K+I ++V       I++AIP+ 
Sbjct  157  RQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTL  216

Query  239  SRGRRREILEMLERFPLHVRSVPGFMDLASGKVQVEDIQEVDIADLLGRDAVPPQQALFE  298
            S+ R REI  + E   ++V  +P + ++ SG ++V+ ++ V++ DLLGRD+V  + A + 
Sbjct  217  SQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASIS  276

Query  299  KCIRGKVVMVTGAGGSIGSELCRQILSSKPKALLLFEHCEFNLYsihlelerliersslA  358
            K +  K ++VTGAGGSIGSE+CRQ+    P  ++L+ H E ++Y IH EL  L       
Sbjct  277  KELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---E  333

Query  359  TRLVPILGSIRNPERLLDVMRTWEVETIYHAAAYKHVPMVEHNVAEGVLNNVIGTLNTAQ  418
              ++PI++ +++ ER+  VM++     +YHAAA KHVP++E N  E++ NNV+GT NTA+
Sbjct  334  IEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAE  393

Query  419  AAVQAGVSNFVLISTDKAVRPTNVMGSTKRVAELILQALSREPAPCLFGASGVHHVNKTR  478
            AA  A VS+FV++STDKAV P NVMG++KRVAE+++Q+++ E +             KT 
Sbjct  394  AAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS-------------KTD  440

Query  479  FTMVRFGNVLGSSGSVIPRFYAQIRAGGPVTVTHPKITRYFMTIPEAAQLVIQAGSMGQG  538
            F  VRFGNVLGS GSVIP F  QI AGGPVTVTHP +TRYFMTIPEA++LV+QAG+++ G
Sbjct  441  FVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATG  500

Query  539  GDVFVLDMGQPVKIAELAEKLIHLSGLSVRSEKCPHGDIAIEYTGLRPGEKLYEELLIGD  598
            G++FVLDMG+PVKI +LA +LI+LSG         + DI+IE++G+R+GEKL+EELL  D
Sbjct  501  GEIFVLDMGKPVKIVDLAKNLIRLSG-------YKEEDIGIEFSGIRSGEKLFEELLNKD  553

Query  599  NVSATE-HPMIMRANEEHLDWDVLKDRLAKLL  629
            ++ + +    I R++ + ++ + L +++  +L
Sbjct  554  EIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

497) B739_1123 in NC_018609


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  275 bits (1028),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 194/466 (42%), Positives = 305/466 (66%), Gaps = 25/466 (5%)

Query  7    WAKKYRRSYL-----RKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITDRKDSRKAKL  61
            W + YR++++     +K  L++G G  +  + + +M  P++  E V ++ D   +++   
Sbjct  126  W-RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPV-LVVDDDSNKQKMS  183

Query  62   LGKRIYTRDFLEKNTKEYLGIDGVLIGSNIA---SREELTEWVNLFLEKDLKVFKSPTVQ  118
            ++  +  ++ + K+  E +    +          S++ L E  +L    ++ VFK P ++
Sbjct  184  IASGVKVQGCI-KDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  119  KLRN---DGNNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIGSEIVRQVA  175
            ++ +   + N++K+ ++EDLL R P+ ++   + K   +K++LVTG++GSIGSEI RQV 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  176  QFGPSLIVVLDRAETPLHEIQLEVEENY-PNIKFEFILADITNKERLEAVFKEYNFSMVY  234
            +F P  I++L+++E ++ +I+ E+   Y  +I    I+AD+ +KER+  V + Y+  +VY
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  235  HAAAYKHVPLMENNPHEAALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNPTNVMGASK  294
            HAAA KHVPLME NP+EA   N+ G++N A  +    V++FVMVSTDKAVNP NVMGASK
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  295  RAAELFVQALQNEPDNQTKFITTRFGNVLGSNGSVIPHFRKQIEKGGPVTITHPEIVRYF  354
            R AE+ +Q+++NE  ++T F++ RFGNVLGS GSVIP F+KQIE GGPVT+THP + RYF
Sbjct  423  RVAEMVIQSMNNET-SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  355  MTIPEACELVLQAGTMGKGGEIFVFDMGEPVKILNLARRMIKLSGLEPDVDIEIVYTGLR  414
            MTIPEA  LVLQAG+++ GGEIFV+DMG PVKI++LA+ +I+LSG   + DI I ++G+R
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIR  540

Query  415  PGEKLYEELLSDGTKTLPTHHEKI------MISKDSVMLYAEIDEL  454
            +GEKL+EELL+ +        EKI       I K+   LY  ID++
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEE--LYNKIDDF  584

498) cap5D in NC_017569


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  275 bits (1029),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 195/465 (42%), Positives = 307/465 (67%), Gaps = 21/465 (4%)

Query  153  FQWAKEYRRSYL-----RKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITARKDSRKA  207
            + W + YR++++     +K  L++G G  +  + + +M  P++  E V  +    + +K 
Sbjct  124  LSW-RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKM  182

Query  208  KLLGK---RIYTRDFLEKTTREYLGIDGVLIGSNTVSIEEIAEWVNLFLEKDLKVFKSPT  264
             + +    +   +D+ E   +    I  ++I+  T+S + + E  +L    ++ VFK P 
Sbjct  183  SIASGVKVQGCIKDIPELVKKF--NIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  265  VQKLRN---DGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIGSEIVRQ  321
            ++++ +   + +++K+ ++EDLL R P+ ++   + K   +K++LVTG++GSIGSEI RQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  322  VAQFEPSLIVVLDQAETPLHEIQLEVEENY-PDIKFEFILADITNKERLESVFKEYNFSM  380
            V +F P  I++L+++E ++ +I+ E+   Y  +I    I+AD+ +KER+  V + Y+  +
Sbjct  301  VCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYV  360

Query  381  VYHAAAYKHVPLIENNPHEATLVNIQGSKNLALLSSHFKVDRFVMVSTDKAVNPTNVMGA  440
            VYHAAA KHVPL+E NP+EA   N+ G++N A  +    V +FVMVSTDKAVNP NVMGA
Sbjct  361  VYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGA  420

Query  441  SKRAAELFVQALQNEEDNQTKFITTRFGNVLGSNGSVIPHFRKQIEKGGPVTITHPEITR  500
            SKR AE+ +Q++ N+E ++T F++ RFGNVLGS GSVIP F+KQIE GGPVT+THP +TR
Sbjct  421  SKRVAEMVIQSM-NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  501  YFMTIPEACDLVLQAGIMGKGGEIFVFDMGEPVKILNLARRMIKLSGLEPDVDIKIVYTG  560
            YFMTIPEA  LVLQAG ++ GGEIFV+DMG PVKI++LA+ +I+LSG   + DI I ++G
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSG  538

Query  561  LRPGEKLYEELLSNDTKTLPTHHEKIMISK----DPVMLYEEIDE  601
            +R+GEKL+EELL++D        EKI  +K    +   LY+ ID+
Sbjct  539  IRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDD  583

499) CC1_04280 in NC_021009


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  274 bits (1026),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 219/547 (41%), Positives = 349/547 (64%), Gaps = 52/547 (9%)

Query  85   VFGRL-HLYSSVWRFASFTELNRVMMATIITTIFQFVGITVFFNRMP-VSYYLVGAVAQF  142
            VF+++ +LY   W +AS +EL  ++ +   + +   + + +F ++ P +  Y++  + ++
Sbjct  57   VFAQIFDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHL  116

Query  143  GLITVVRFSYRYINLQRNSRVQKKQSTHNIMVIGAGAAGQAILREMRNSEQISGQASCVI  202
             LI   R+S R   + R++ + K       +++G+G +G  ++R+M N+  ++ ++  V+
Sbjct  117  LLIGGSRLSWR---IYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  203  DDNPNKWGRYME-GVQIVGGRDDILSAVEKYEINEIYFAIPTASPQIRRDILNICKETKC  261
            DD++NK    +  GV++ G   DI   V K++I+ I +AIPT S Q  R+I ++C  T+ 
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  262  ELKRLPGMYQLANGDVSLSKLKPVAVEDLLGRDPIKVNMDEIFQYIKGKTIMVTGGGGSI  321
            E+ ++P + ++ +G++ ++KLK V VEDLLGRDP+ ++M  I + +  KTI+VTG+GGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  322  GSELCRQIAAHEPKQLIIFDVYENNAYEIEQELKRKYKDSLNLVVLIGSVRDSRRVDMVF  381
            GSE+CRQ+    P ++++++  EN+ Y+I+QEL   YK+ ++++ +I+ V+D  R+  V 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  382  KKYRPEIVYHAAAHKHVPLMETSPNESIKNNVIGTYKTAYAALKYGTQRFVLISTDKAVN  441
            + Y+P +VYHAAAHKHVPLME +P+E+IKNNV+GT +TA AA      +FV++STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  442  PTNIMGASKRLCEMVIQTMDAVSKTGRMDILPLLHAHNGKDDVAIRHRSAESRKTSNIQI  501
            P N+MGASKR+ EMVIQ+M+  + T++ D+            VA+R  +  + + S I +
Sbjct  414  PPNVMGASKRVAEMVIQSMN--NETSKTDF------------VAVRFGNVLGSRGSVIPL  459

Query  502  SSVSNKNRTSTQFVAVRFGNVLGSNGSVIPLFKKQIEAGGPVTVTHPDIVRYFMTIPEAV  561
                             F + + + G              PVTVTHP++ RYFMTIPEA 
Sbjct  460  -----------------FKKQIEAGG--------------PVTVTHPGMTRYFMTIPEAS  488

Query  562  SLVLQAGTYAWGGEIFVLDMGDPVKIDTLARNLIKLSGYEPDVDIKVAYTGLRSGEKLFE  621
             LVLQAG+ A GGEIFVLDMG PVKI  LA+NLI+LSGY  + DI + ++G+RSGEKLFE
Sbjct  489  RLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIRSGEKLFE  547

Query  622  EKLMAEE  628
            E L  +E
Sbjct  548  ELLNKDE  554

500) Arnit_2539 in NC_014166


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  273 bits (1022),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 199/455 (44%), Positives = 314/455 (70%), Gaps = 23/455 (5%)

Query  124  KDKRVVIYGAGKAGTKLSEEYRNSQYLIK---YFVDDSKKLQKRSID-GIQILS-KSKLK  178
            K K  +I G+G++G+ L  +  N+ Y+       VDD  + QK SI  G+++ +    + 
Sbjct  139  KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIP  198

Query  179  NIIQKQKYELLVIAMPSASKSRIKFIYDELSPYFKTIKI----LPSLSEILQEKDYSTQL  234
            ++++K +   ++IA+P+ S+ R++    E++      ++    +P++ +++       +L
Sbjct  199  ELVKKFNIKKIIIAIPTLSQQRLR----EINKLCEGTNVEVFKMPNIENVMSGEIEVNKL  254

Query  235  KDISVEDLLARHPKDLDKEKIENFIKDKVVLITGAGGSIGSEISRQCKKFGAKQLILLDH  294
            K + VEDLL+R+P +LD   I + + +K +L+TGAGGSIGSEI RQ  KF + +++LL+H
Sbjct  255  KKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGH  314

Query  295  SEFNLYQITEEL----NSDI-VIPVMQTVRNFGFIENTFKKYKPQIVIHAAAYKHVPLVE  349
            +E ++Y+I +EL    + +I VIP++  V++   + +  + YKP +V HAAA KHVPL+E
Sbjct  315  GENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLME  374

Query  350  DNILEGISNNIIGTKNCIDLSIKYEVEKFVLISTDKAVRPTNVMGTTKRICELYAQNVKS  409
             N  E+I NN++GT+N  + +   EV KFV++STDKAV P NVMG++KR+ E+  Q++++
Sbjct  375  YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNN  434

Query  410  DS--TEIVAVRFGNVLGSSGSVIPKFKSQIESGGPITVTHPDITRYFMLIPEACELVLQA  467
            ++  T++VAVRFGNVLGS GSVIP FK QIE+GGP+TVTHP++TRYFM IPEA  LVLQA
Sbjct  435  ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQA  494

Query  468  ASIGKGGEIFILDMGEPIKIVDLAKKMIELSG--RENVQIEFCGLRPGEKLYEELLINDS  525
            ++++ GGEIF+LDMG P+KIVDLAK++I LSG   E++ IEF G+R+GEKL+EELL +D 
Sbjct  495  GALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  526  -DKNTDYESITVASSTLFDIDLLNKKIDELLISED  559
             + +  YE I  +    ++ + L +KID++LI+E 
Sbjct  555  IHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINES  589

501) G148_0862 in NC_020125


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  273 bits (1020),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 196/464 (43%), Positives = 307/464 (67%), Gaps = 21/464 (4%)

Query  7    WAKEYRRSYL-----RKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITARKDSRKAKL  61
            W + YR++++     +K  L++G G  +  + + +M  P++  E V  +    + +K  +
Sbjct  126  W-RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSI  184

Query  62   L-GKRI--YTRDFLEKTTREYLGIDGVLIGSNTASIEEIAEWVNLFLEKDLKVFKSPTVQ  118
              G ++    +D+ E   +    I  ++I+  T S + + E  +L    ++ VFK P ++
Sbjct  185  ASGVKVQGCIKDIPELVKKF--NIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIE  242

Query  119  KLRN---DGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIGSEIVRQVA  175
            ++ +   + +++K+ ++EDLL R P+ ++   + K   +K++LVTG++GSIGSEI RQV 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  176  QFEPSLIVVLDQAETPLHEIQLEVEENY-PNIKFEFILADITNKERLEAVFKEYNFSMVY  234
            +F P  I++L+++E ++ +I+ E+   Y  +I    I+AD+ +KER+  V + Y+  +VY
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVY  362

Query  235  HAAAYKHVPLIENNPHEAALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNPTNVMGASK  294
            HAAA KHVPL+E NP+EA   N+ G++N A  +    V++FVMVSTDKAVNP NVMGASK
Sbjct  363  HAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASK  422

Query  295  RAAELFVQALQNEPDNQTKFITTRFGNVLGSNGSVIPHFRKQIEKGGPVTITHPEITRYF  354
            R AE+ +Q+++NE  ++T F++ RFGNVLGS GSVIP F+KQIE GGPVT+THP +TRYF
Sbjct  423  RVAEMVIQSMNNET-SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYF  481

Query  355  MTIPEACELVLQAGTMGKGGEIFVFDMGEPVKILNLARRMIKLSGLEPDVDIKIVYTGLR  414
            MTIPEA  LVLQAG+++ GGEIFV+DMG PVKI++LA+ +I+LSG   + DI I ++G+R
Sbjct  482  MTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DIGIEFSGIR  540

Query  415  PGEKLYEELLSDDTKTLPTHHEKIMISK----DSVMLYAEIDEL  454
            +GEKL+EELL+ D        EKI  +K    +   LY  ID++
Sbjct  541  SGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

502) FN1696 in NC_003454


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  273 bits (1023),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 222/540 (42%), Positives = 359/540 (67%), Gaps = 20/540 (3%)

Query  59   ILKIYNNSWRFSGISEYVALITLSVSTTILS--YILRVFLKLSTKSSLYFEtfiiftfll  116
            I+ +Y+ +W ++++SE + LI  SV+++I++   I+ +F + +    LYF T ++  +L+
Sbjct  61   IFDLYHRAWEYASVSELI-LIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  117  iVSRFLMFLTRMKGIIKKDLNQENVLIYGAGESGVLLVKESRINPNFPYKIVGFLDDNIN  176
              SR L      K +I K+ ++   LI G+G +G LL+++    P      V  +DD+ N
Sbjct  120  GGSR-LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  177  KIGGKV-YGLRVFGGLDKVQEVVEKKDISKIIISMPSVSQNKVSNILKEINKI-EGLSVK  234
            K    +  G++V G +  + E+V K +I KIII++P++SQ++    L+EINK+ EG +V 
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR----LREINKLCEGTNVE  234

Query  235  I--LPNVDNLIEEGNLTTQLRNIKLEDLLGRDEVKINTKEVFEFIQDKVIFVTGGGGSIG  292
            +  +PN++N++       +L+++ +EDLLGRD V ++   +   + +K I+VTG+GGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  293  SELINQIAKYnpkkiinieinenASYLMELELKRKY-PYLDYKTEIASVRDFDKLDMLFN  351
            SE+  Q+ K+ P +I+ +   EN+ Y ++ EL   Y   ++    IA V+D +++  + +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  352  NYKPDILFHAAAHKHVPLMENNPEEAIKNNVFGTRNVAECCLKYKLESVVLISTDKAVNP  411
             YKP +++HAAAHKHVPLME NP+EAIKNNV+GTRN AE      +   V++STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  412  TNIMGATKRVCEMIFQKYSERSSETKFVAVRFGNVLGSNGSVIPIFSKLIEERKNLTLTH  471
             N+MGA+KRV EM++Q  ++ +S T FVAVRFGNVLGS GSVIP+F K IE    +T+TH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  472  KDIIRYFMTIPEAAQLVIEAATIGKGGEILILDMGEPVKIYDLAKNMIKLSG---STVGI  528
             ++ RYFMTIPEA++LV++A++++ GGEI++LDMG PVKI DLAKN+I+LSG     +GI
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  529  DIVGLRPGEKLFEELLYDINSSEKTSNNKIFITNMENEKVKVDIDDYYTILRDLIKENDI  588
            ++ G+R+GEKLFEELL   +       +KI+  +++    K++ ++ Y  + D++ ++ +
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQ----KIEKEELYNKIDDFLINESV  590

503) Hprae_0324 in NC_017455


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  272 bits (1018),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 193/437 (45%), Positives = 314/437 (72%), Gaps = 8/437 (1%)

Query  2    KNVLIVGAGSAGKHVLKEITNNGHKYDYNVIGFLDADSSKHGNEI-DGYEILDHHDNINK  60
            K  LIVG+G +G  +++++ N     + + +  +D DS+K+   I  G  + +   +I  
Sbjct  141  KPTLIVGGGRGGSLLIRQMMNTPYM-GMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPE  199

Query  61   YIDEFDINEVIVATTEINHQGLNKIYDNLKTFDKNIEIKVLPTVEELLKGEPFTKQLREV  120
             +  F+I+ +I+A   +++Q L  I ++L   + N+E+  +P +E+++ GE   ++L+ V
Sbjct  200  LVKKFNIKKIIIAIPTLSQQRLREI-NKLCE-GTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  121  QVEDLLGRESIQinneninkyinnkkVLVTGAAGSIGSELCRQIVKYNPKELIILDINEN  180
            +VEDLLGR++++++  +I+K + +K +LVTGA+GSIGSE+CRQ+ K+ P  +++L+  EN
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  181  DLYFLKLFLERHY--EVEINFEIANIREKDKLEFLFKEYKPDLVYHAAAHKHVPLMEKNI  238
             +Y +   L   Y  E+E+   IA++++K+++  + + YKP +VYHAAAHKHVPLME N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  239  EEAVNNNVFGSKNLLEMADKYQVEKFVLISTDKAVNPTNVMGATKRLSEIILENINKN-S  297
            +EA++NNV+G++N  E A   +V KFV++STDKAVNP NVMGA+KR++E++++++N++ S
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  298  KTMYMAVRFGNVLGSNGSVVPLFKSLIKEGKDLTVTHEEVTRYFMTIPEAAQLVLEAGYI  357
            KT ++AVRFGNVLGS GSV+PLFK  I  G  +TVTH  +TRYFMTIPEA++LVL+AG +
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  358  GQGGEVFVLDMGKPIKIMDLAEKMIELSGLRVGKDIDIKITGLRPGEKLYEELLYDIDSC  417
            + GGE+FVLDMGKP+KI+DLA ++I LSG +   DI+I ++G+R+GEKL+EELL   +  
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIH  556

Query  418  QKTENDKIYISQIRRED  434
                 +KIY +++++ +
Sbjct  557  PEQVYEKIYRGKVQKIE  573

504) wbpM in NC_008260


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  272 bits (1019),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 205/489 (42%), Positives = 329/489 (68%), Gaps = 17/489 (3%)

Query  94   VFIIFWALLVLYLGGSRFMMRRFLYNVLGKHTLREavavfgaggagaQLVSGLLSST--E  151
            +++I W + +L +GGSR+  R +    ++K+  + +  + G+G +G+ L+  ++++    
Sbjct  107  LYFITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMG  166

Query  152  LRPLMIVDDAPGKQGM-LLCGVPVVG-RRALEKAVERGAIRTVLLALPSESRATRMAVVR  209
            + P+++VDD + KQ M +  GV V G  + +   V +  I+ +++A+P+ S+     + +
Sbjct  167  MEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINK  226

Query  210  WLETLNVHVQTVPSFADIASGKARLEEVKDVSIEDLLGRDPVPPRADLLSRCISGKHVLV  269
              E  NV+V  +P++ ++ SG   ++ +K V +EDLLGRDPV      +S+ ++ K +LV
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  270  TGAAGSIGSELCRQILKLNPSRLVLLDQSEFGLYAIEKELRATADSLGKSVEIEAVLGSV  329
            TGA+GSIGSE+CRQ+ K+ P R++LL+++E ++Y I++EL +        +E+ ++++ V
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKE---EIEVIPIIADV  343

Query  330  VNRGLMERLCSDQRVDTVYHAAAYKHVPIVEANPTAGVRNNIlgtleaalgaeaaHVKHF  389
             ++  M ++    +   VYHAAA KHVP++E NP  +++NN+LGT ++A +A  A+V  F
Sbjct  344  QDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKF  403

Query  390  ILVSTDKAVRPTNVMGATKRFAELVLQAIAARGSDTVFSMVRFGNVLGSSGSVVPLFRDQ  449
            ++VSTDKAV P NVMGA+KR AE+V+Q++    S T F  VRFGNVLGS GSV+PLF+ Q
Sbjct  404  VMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQ  463

Query  450  IRKGGPVTVTHPDVIRYFMTIPEASQLVIQAGAMAQGGEVFVLDMGEPVRIVDLARTMVH  509
            I  GGPVTVTHP++ RYFMTIPEAS+LV+QAGA+A GGE+FVLDMG PV+IVDLA+ +++
Sbjct  464  IEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIR  523

Query  510  LMGMTVRDEKMPEGDIEIAFSGLRPGEKLYEELLIGECSIRTEH--EMIMQAHEEKLSWD  567
            L G         E DI I FSG+R+GEKL+EELL  +  I+ E+  E I ++  +K+  +
Sbjct  524  LSGYK-------EEDIGIEFSGIRSGEKLFEELLNKD-EIHPEQVYEKIYRGKVQKIEKE  575

Query  568  EVHFALEAF  576
            E+   ++ F
Sbjct  576  ELYNKIDDF  584

505) Nhal_2428 in NC_013960


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  272 bits (1016),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 202/492 (42%), Positives = 336/492 (69%), Gaps = 13/492 (2%)

Query  70   GLYRGLWRFASIPDLLNIIRAVGYGALLVALTLFLINRLHGVPRSIlllypifsllllAG  129
            +LY+  W +AS+++L+ I+++V  + +  ++ + ++ +     R + ++  +  LLL++G
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR-LYFITWMMHLLLIGG  121

Query  130  PRLAYRMWKD-RRLTLAAGPHRKRVLILGAGRAGDLLARDMLGEANYL---PVAFLDDRR  185
            +RL+   W+  R+  ++    +K  LI+G+GR+G LL R+M+ ++ Y+   PV  +DD  
Sbjct  122  SRLS---WRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMM-NTPYMGMEPVLVVDDDS  177

Query  186  DLVGRQVRR-IPVVGVLEQLPAKADEMAADVAVIAMPSANSRQMRRAVSLCEQAGIPYRT  244
            +     +   + V G + ++P           +IA+P+ + +++R    LCE + +    
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  245  LPRLQDLVSGQASIKELREVAIDDLLGRDEVFLDWDRIRQslagksllvsggggsigsel  304
            +P +++++SG+  ++ L+ V ++DLLGRD V LD   I + L+ K++LV+G+GGSIGSE+
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  305  CRQLARLGPAALIVIDNNEYRLYRIEQELRQGFLA-LNLYTYLCDVGDETSVKEILGRHL  363
            CRQ+ ++ P  ++++++ E  +Y+I+QEL   +   +++   + DV D   +K ++    
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  364  PEVVFHAAAYKHVPLLERQARQAVGNNILGTRCLAEAAQQIGCGAFILISTDKAVNPTSV  423
            P VV+HAAA KHVPL+E ++++A+ NN+LGTR  AEAA+    + F+++STDKAVNP +V
Sbjct  358  PYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNV  417

Query  424  MGASKRVAELLCQGLNRRSG-TRFIVVRFGNVLGSAGSVVPLFQAQITAGGPVTVTHPEM  482
            MGASKRVAE++ Q++N  ++ T F+ VRFGNVLGS GSV+PLF+ QI AGGPVTVTHP M
Sbjct  418  MGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGM  477

Query  483  TRYFMTIPEACHLITQAAVIGKGGEIFVLDMGESIKITELAEEMIRLSG-QESEVEIVYT  541
            TRYFMTIPEA +L+ QA+ ++ GGEIFVLDMG ++KI +LA ++IRLSG +E ++ I ++
Sbjct  478  TRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFS  537

Query  542  GLRPGEKLHEEL  553
            G+R+GEKL EEL
Sbjct  538  GIRSGEKLFEEL  549

506) Saut_1486 in NC_014506


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  271 bits (1013),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 200/435 (46%), Positives = 287/435 (66%), Gaps = 32/435 (7%)

Query  123  KTKSVVIYGAGKAGIKLESEFANTEYK---VNYFVDDNKIIQGRSIDSVAVLSKQKLKKI  179
            K K+ +I G+G++G  L  +  NT Y        VDD+   Q  SI S          K+
Sbjct  139  KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGV--------KV  190

Query  180  IGNEKKFNLLVIAM---------PSAPKERIKEIYEDLSAYFQEIKILPSMDEILKDKDF  230
             G  K +  LV            P+ +++R++EI     +   E+  +P++++++ +   
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  231  STQLKNISVENLLARNPKDLDKNKIEEFIKDKTVLVTGAGGSIGSEICRQCEKYGARKLI  290
              +LK++ VE+LL+R+P +LD   I   + +KT+LVTGAGGSIGSEICRQ  K+ + +++
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  291  LLDHSEYNLYAILEEL-----KNVDVEPVMQSVINVEHLDETFAKYQPDLVIHAAAYKHV  345
            LL+H+E ++Y I +EL      +++V P++  V + E++      Y+P +V HAAA KHV
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  346  PLVESNIYEGILNNVVGTKNVIDTSIKYGVQKFVMISTDKAVRPTNVMGTTKRICELYAQ  405
            PL+E N  E+I NNV+GT+N  +++    V KFVM+STDKAV P NVMG++KR+ E+  Q
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  406  NSNGQG--TDIVAVRFGNVLGSSGSVIPKFKSQIQNGQNITVTHPDITRYFMLIPEACEL  463
            + N +   TD+VAVRFGNVLGS GSVIP FK QI+ G  +TVTHP++TRYFM IPEA  L
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  464  VLQAGAIGTGGEIFILDMGEPIKIVDLAKKMIELSG--REDIKIEFSGLRPGEKLYEELL  521
            VLQAGA++TGGEIF+LDMG P+KIVDLAK++I LSG   EDI IEFSG+R+GEKL+EELL
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL  550

Query  522  IDDSDVQTE--YESI  534
             +  +++ E  YE I
Sbjct  551  -NKDEIHPEQVYEKI  564

507) Flexsi_0362 in NC_015672


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  271 bits (1013),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 188/462 (41%), Positives = 310/462 (68%), Gaps = 4/462 (0%)

Query  118  LDFIISTLLICTFRISKRIYNEILFTNSSSRTKTLIVGANTQGERIARELLRDEKQVFYP  177
            +  ++  LLI   R+S RIY   ++++ + +  TLIVG+   G  + R+++        P
Sbjct  110  ITWMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEP  169

Query  178  YCFIDNDITKKGVMISNIPVYVGYEK-IYEILDKNIIEAVIIANPSITHKEIREIVEAAK  236
               +D+D  K+ + I++     G  K I E++ K  I  +IIA P+++++ +REI     
Sbjct  170  VLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCE  229

Query  237  QHNINEIKIAPSIYQMRDRTLDVTDIRDINVEDLLARNVVQVENNKIRDMVENRSVLITG  296
              N++ +K+ P+I ++    ++V  ++ ++VEDLL+R+ V+++   I   + ++++L+TG
Sbjct  230  GTNVEVFKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  297  AGGSIGSEIARQIMQFSPVRIVCFEIDetelfdltnellllnngnsttVVPWVGDIRNKS  356
            AGGSIGSEI RQ+ +F+P RI+ +  +  + +   ++ L+    +   V+P ++D+++K 
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLG-HGENSIYHIHQELIGLYKEEIEVIPIIADVQDKE  347

Query  357  TLDNLFKKEKIDIIFHSAAYKHVPLMEYFPKEAFCTNVMGTYYLAQTASAYGVEKFINIS  416
             + ++ +  K  +++H+AA KHVPLMEY P+EA+  NV+GT   A++A    V KF+ +S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  417  TDKAVSPTSIMGATKRISEMILTTLDKKSSDTDFISVRFGNVLGSRGSVVPVFLNQIKQG  476
            TDKAV+P ++MGA+KR++EM++ ++++ +S TDF++VRFGNVLGSRGSV+P+F +QI  G
Sbjct  408  TDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAG  467

Query  477  GPVTVTHPEIKRYFMTIPEAVLLVFQAASMGEGGEVFVLDMGEPVKIVSIAEELIKLQNL  536
            GPVTVTHP + RYFMTIPEA  LV+QA++++ GGE+FVLDMG PVKIV +A +LI+L   
Sbjct  468  GPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGY  527

Query  537  EPYEDIEIKFTGLRPGEKLFEEILTAEEGTNTTTHEKIYIAR  578
               EDI I F+G+R+GEKLFEE+L  +E       EKIY ++
Sbjct  528  KE-EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGK  568

508) Caka_1661 in NC_014008


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  271 bits (1014),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 186/444 (42%), Positives = 314/444 (71%), Gaps = 10/444 (2%)

Query  118  LLSFLMISAFRIGFRMKSSRELSDWFGDRDAMN--VVIVGAGEVGATVCAELINKTGYGM  175
            ++ +L+I++ R++ R+         F  +++ +   +IVG+G  G+ +  +++N    GM
Sbjct  113  MMHLLLIGGSRLSWRIYRKT-----FISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  176  RPVAFVDDNERKVGRYI-HGILVADTVEGLARVAQRLSVQKAVIAFPSASMQRVKAVVKV  234
             PV  VDD+  K    I  G+ V + + +++ + ++++++K +IA+P+ S QR++ + K+
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKL  227

Query  235  AQEIGLEVDIVPALTDIVSGRARMTQLRPVQLEDLLGRDPVDLNSDGIHEMLAGKRVLVT  294
             +   +EV  +P + +++SG   + +L+ V++EDLLGRDPV+L+  +I   L+ K +LVT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  295  GAGGSIGSELVVQILGYEPQELCCVDQAEIAVFKLREEVLKPTAGSVNWQSCVLDISDHA  354
            GAGGSIGSE+  Q+  + P+ +  ++++E +++ +++E++      ++  + + D+ D  
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKE  347

Query  355  SMEQLFESFKPEVVFHAAAHKHVNLMEDQPAEALKNNFIATANLARLASQAAVERFVFIS  414
             M ++ +++KP VV+HAAAHKHV LME +P EA+KNN ++T N A  A  A V +FV +S
Sbjct  348  RMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVS  407

Query  415  TDKAINPTSVMGASKRLAELSLLERQVESSNTTKFIAVRFGNVLGSSGSVIPIFRRQIEE  474
            TDKA+NP +VMGASKR+AE+ +++   + ++ T F+AVRFGNVLGS GSVIP+F++QIE 
Sbjct  408  TDKAVNPPNVMGASKRVAEM-VIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEA  466

Query  475  GGPITVTDPEVTRFFMTVQEAVGLVLQSATQGSGGEIFVLDMGESMKIVDVARQMIALSG  534
            GGP+TVT+P +TR+FMT+ EA  LVLQ+++ ++GGEIFVLDMG ++KIVD+A+++I LSG
Sbjct  467  GGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSG  526

Query  535  LQEGVDIDIEFIGLRPGEKLYEEV  558
             +E  DI+IEF G+R+GEKL+EE+
Sbjct  527  YKEE-DIGIEFSGIRSGEKLFEEL  549

509) H045_04735 in NC_020209


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  271 bits (1015),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 211/511 (42%), Positives = 333/511 (66%), Gaps = 39/511 (7%)

Query  124  FNYWWLSLIMLGGLRLAMRQYFLGDWFAAAQHVPFTSREDGLPRVAIYGAGAAGNQLVAA  183
            F  W + L+++GG RL+ R Y          +  F S+E+      I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  184  LRMGR--VMRPV-AFiddddsisdRVIAGLQVYKS-KHIQRMIDATSAQEILLAIPSANR  239
            +       M PV    DD +     + +G++V    K+I  ++   + + I++AIP+ ++
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  240  ARRREILGFLEGYPLHVRSIPGFMDLASGRVKVDDIQEVDIADLLGRDSVPAQGELLERC  299
             R REI  + EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  +   + + 
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  300  ILEQNVLVTGAGGSIGSELCRQILALHPKTLLLFEHSEFNLYCILSEIEQRIVRESLPIR  359
            + ++ +LVTGAGGSIGSE+CRQ+  + P  ++L+ H+E ++Y I  E+   + +E   I 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEE--IE  335

Query  360  VLPILGSVRNQEQLIDVMKTWRVDTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLNTAQAA  419
            V+PI++ V+++E++  VM++ +   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA
Sbjct  336  VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  420  LQAGVSNFVLISTDKAVRPTNVMGSTKRLAELTLQALSLEVAPVLFGDESNAPKVNKTRF  479
              A VS+FV++STDKAV P NVMG++KR+AE+ +Q+++ E +              KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDF  441

Query  480  TMVRFGNVLGSSGSVIPLFHKQIKLGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGG  539
              VRFGNVLGS GSVIPLF KQI  GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  540  DVFVLDMGEPVRIVELAEKMVHLSGLSLRSEKNPHGDIAIEFTGLRPGEKLYEELLIGDN  599
            ++FVLDMG PV+IV+LA ++++LSG         + DI+IEF+G+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  600  VVATQ-HPMIMSANEDHIEWEVLKSKLTELL  629
            + + Q    I  ++ + IE E L +K+ ++L
Sbjct  555  IHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

510) XOO2185 in NC_006834


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1011),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 215/524 (42%), Positives = 340/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDRVPLSVLVVYPFA-LSAML-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ +   ++ P+  L +Y ++ +  +L 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPF--LRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQITHSGDAGQR--VLILGAGRAAEGLVRDLRRTG--AFVPIGYLDD  179
             G +RL   +W+ Y+ T  +  G++   LI+G+GR++  L+R++  T   +  P+  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ANNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             +N +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHSKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

511) XOO_2055 in NC_007705


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1011),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 215/524 (42%), Positives = 340/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDRVPLSVLVVYPFA-LSAML-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ +   ++ P+  L +Y ++ +  +L 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPF--LRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQITHSGDAGQR--VLILGAGRAAEGLVRDLRRTG--AFVPIGYLDD  179
             G +RL   +W+ Y+ T  +  G++   LI+G+GR++  L+R++  T   +  P+  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ANNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             +N +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHSKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

512) PXO_00896 in NC_010717


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1011),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 215/524 (42%), Positives = 340/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDRVPLSVLVVYPFA-LSAML-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ +   ++ P+  L +Y ++ +  +L 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPF--LRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQITHSGDAGQR--VLILGAGRAAEGLVRDLRRTG--AFVPIGYLDD  179
             G +RL   +W+ Y+ T  +  G++   LI+G+GR++  L+R++  T   +  P+  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ANNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             +N +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHSKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

513) XOC_2688 in NC_017267


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1010),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 215/524 (42%), Positives = 340/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDRVPLSVLVVYPFA-LSAML-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ +   ++ P+  L +Y ++ +  +L 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFT--QQAPF--LRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQITHSGDAGQR--VLILGAGRAAEGLVRDLRRTG--AFVPIGYLDD  179
             G +RL   +W+ Y+ T  +  G++   LI+G+GR++  L+R++  T   +  P+  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ANNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             +N +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

514) XAC2293 in NC_003919


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1010),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 338/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKASFLGLVAIVLALA-YDRLDGVPLSVLVVYPFA-LSALL-  124
            +LY+  W +ASV++L  I K+   ++VA  + ++ + +      + L +Y ++ +  LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQIAHSGDAAQR--VLILGAGRAAEGLVRDLRRTG--AFVPVGYLDD  179
             G +RL   +W+ Y+ +  +  +++   LI+G+GR++  L+R++  T   +  PV  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ANNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             +N +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEAYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

515) XAC29_11630 in NC_020800


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1010),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 338/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKASFLGLVAIVLALA-YDRLDGVPLSVLVVYPFA-LSALL-  124
            +LY+  W +ASV++L  I K+   ++VA  + ++ + +      + L +Y ++ +  LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQIAHSGDAAQR--VLILGAGRAAEGLVRDLRRTG--AFVPVGYLDD  179
             G +RL   +W+ Y+ +  +  +++   LI+G+GR++  L+R++  T   +  PV  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ANNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             +N +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEAYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

516) XCAW_01958 in NC_020815


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1010),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 338/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKASFLGLVAIVLALA-YDRLDGVPLSVLVVYPFA-LSALL-  124
            +LY+  W +ASV++L  I K+   ++VA  + ++ + +      + L +Y ++ +  LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQIAHSGDAAQR--VLILGAGRAAEGLVRDLRRTG--AFVPVGYLDD  179
             G +RL   +W+ Y+ +  +  +++   LI+G+GR++  L+R++  T   +  PV  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ANNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             +N +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEAYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

517) XACM_2301 in NC_016010


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1008),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 214/524 (41%), Positives = 338/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALA-YDRLDGVPLSVLVVYPFA-LSAML-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ + +      + L +Y ++ +  +L 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQIAHSGDAGQR--VLILGAGRAAEGLVRDLRRTG--AFVPIGYLDD  179
             G +RL   +W+ Y+ +  +  G++   LI+G+GR++  L+R++  T   +  P+  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ASNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             SN +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

518) XCR_2457 in NC_017271


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1008),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 337/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDGVPLSVLVVYPFA-LSALL-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ + +      + L +Y ++ +  LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQIAHSGDAAQR--VLILGAGRAAEGLVRDLRRSG--TFVPVGFLDD  179
             G +RL   +W+ Y+ +  +  +++   LI+G+GR++  L+R++  +      PV  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ATHLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             ++ +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDSAVVAHALR  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVVQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDIA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   DI+
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

519) XCV2491 in NC_007508


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  270 bits (1008),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 214/524 (41%), Positives = 338/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALA-YDRLDGVPLSVLVVYPFA-LSAML-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ + +      + L +Y ++ +  +L 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQIAHSGDAGQR--VLILGAGRAAEGLVRDLRRTG--AFVPIGYLDD  179
             G +RL   +W+ Y+ +  +  G++   LI+G+GR++  L+R++  T   +  P+  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ASNLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             SN +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALN  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   D++
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

520) THA_1627 in NC_011653


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  269 bits (1007),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 210/507 (42%), Positives = 334/507 (66%), Gaps = 14/507 (2%)

Query  58   YKIVWRYANQKDFLIIFRGTLFSYLLTVMFFHFYRSFVLPRSVGMITFLGSFMFILTGRL  117
            Y   W YA+  ++++I ++   S + T ++  ++        +  IT +  +++I  +RL
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGGSRL  124

Query  118  LYQFFVQT--SKNHTRK-FLIVGTENMAVSLAEDIEKNK-VG-EIVAFVDDDKSKIGRTI  172
              +++ +T  SK+  +K  LIVG    +  L  ++ +   +G E V  VDDD +K   +I
Sbjct  125  SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSI  184

Query  173  M-GKKVYGPISKIGELSKVIDFDELIIAIPGITSNKVNQivdlvdlskvkvkiiPSFEEI  231
              G KV G I  I EL K +++  +IIAIP ++ +++ +I  L + ++V V  +P++E++
Sbjct  185  ASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENV  244

Query  232  LSEKVKIDDIRNISLEDIIGRKPIDVNLQEIGEYLKDKVVLVTGAGGSIGSELCRQIVIQ  291
            +S  + ++ ++++ +ED++GR P+++++  I+  L +K +LVTGAGGSIGSE+CRQ+   
Sbjct  245  MSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKF  304

Query  292  KPRSLILLGRGENSIYEISEELNEKY-ADVEIFRAIGDVENREWMEKIFEKFKPDIVFHA  350
             P  ++LLG+GENSIY+I +EL   Y  ++E++  I+DV+++E+M K+ + +KP +V+HA
Sbjct  305  TPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHA  364

Query  351  AAHKHVPLMEENPYEAIRVNVFGTINLADISCKFNVEKFVFISTDKAVNPTSFMGLSKRI  410
            AAHKHVPLME NP EAI+ NV+GT N A+ +   +V KFV +STDKAVNP + MG SKR+
Sbjct  365  AAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRV  424

Query  411  AELYILSKK---CSTRFSIVRFGNVIGSRGSVLWKFKKQIEQGKPVTITHPDMRRYFMSI  467
            AE+ I S +     T F  VRFGNV+GSRGSV+  FKKQIE G PVT+THP+M RYFM+I
Sbjct  425  AEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTI  484

Query  468  PEAVSLVLESTIL--NGNLFVLDMGEQIPIEEIARKLGKILG--KDNIEIVYTGIRRGEK  523
            PEA  LVL++  L   G++FVLDMG  + I ++A++L ++ G   ++I I ++GIR GEK
Sbjct  485  PEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEK  544

Query  524  LYEELFYPYEVANRTKHPKIFSVKYDK  550
            L+EEL+   E+       KI+  K +K
Sbjct  545  LFEELLNKDEIHPEQVYEKIYRGKVQK  571

521) Pfl01_4051 in NC_007492


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  269 bits (1007),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 202/485 (42%), Positives = 315/485 (65%), Gaps = 38/485 (7%)

Query  119  FNYWWLSLVIIGGLRLCMRQYFMGDWFTAAQHVPFTSRDDGLTKVAIYGAGVAGNQLVAA  178
            F  W + L++IGG RL  R Y          +  F S+++      I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  179  LRMGR--VMRPV-afidddasiadraiSGLQVYKP-KHIQQMIDVTGAQEILLALPSSTR  234
            +       M PV    DD         SG++V    K+I +++     + I++A+P+ ++
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  235  ARRREILNLLEGFPLHIRSVPSFTDLASGRVKVDDIQEVDIADLLGRDSVPAQSDLLAHC  294
             R REI +L EG  +++  +P++ ++ SG + V+ ++ V++ DLLGRD+V  +   ++  
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  295  ITGKVVMVTGAGGSIGSELCRQIFLLGPITLLLFDHSEFNLYSILSELEQRIARESVSIR  354
            +T K ++VTGAGGSIGSE+CRQ+  + P  ++L++H+E ++Y I  EL   I+     I 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQEL---IGLYKEEIE  335

Query  355  LLPILGSIRHPHKLLDVMKTWGVDTVYHAAAYKHVPMVEHNIAEGVLNNVIGTLNTAQAA  414
            ++PI++ +++ +++  VM++     VYHAAA KHVP++E N  E++ NNV+GT NTA+AA
Sbjct  336  VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  415  LQAGVSNFVLISTDKAVRPTNIMGSTKRLAELTLQALSRELAPVLFGDKANVSRVNKTRF  474
              A VS+FV++STDKAV P N+MG++KR+AE+ +Q+++ E               +KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNE--------------TSKTDF  441

Query  475  TMVRFGNVLGSSGSVIPLFHSQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGG  534
              VRFGNVLGS GSVIPLF  QI +GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  535  DVFVLDMGEPVKIVELAEKMIHLSGLSVRSEKNVHGDIAIEFTGLRPGEKLYEELLIGDN  594
            ++FVLDMG PVKIV+LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  595  VSATP  599
            + +  
Sbjct  555  IHPEQ  559

522) XC_1929 in NC_007086


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  269 bits (1006),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 337/524 (65%), Gaps = 20/524 (3%)

Query  45   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDGVPLSVLVVYPFA-LSALL-  101
            +LY+  W +ASV++L  I KS   ++VA  + ++ + +      + L +Y ++ +  LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  102  -GTPRLLYRAWKDYQIAHSGDAAQR--VLILGAGRAAEGLVRDLRRSG--TFVPVGFLDD  156
             G +RL   +W+ Y+ +  +  +++   LI+G+GR++  L+R++  +      PV  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  157  ATHLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  214
             ++ +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  215  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  274
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  275  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALR  333
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  334  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  393
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  394  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  453
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  454  PDVTRYFMTIPEACQLVVQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDIA  513
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   DI+
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  514  ILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQV  557
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

523) XCC2189 in NC_003902


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  269 bits (1006),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 337/524 (65%), Gaps = 20/524 (3%)

Query  45   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDGVPLSVLVVYPFA-LSALL-  101
            +LY+  W +ASV++L  I KS   ++VA  + ++ + +      + L +Y ++ +  LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  102  -GTPRLLYRAWKDYQIAHSGDAAQR--VLILGAGRAAEGLVRDLRRSG--TFVPVGFLDD  156
             G +RL   +W+ Y+ +  +  +++   LI+G+GR++  L+R++  +      PV  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  157  ATHLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  214
             ++ +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  215  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  274
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  275  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALR  333
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  334  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  393
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  394  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  453
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  454  PDVTRYFMTIPEACQLVVQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDIA  513
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   DI+
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  514  ILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQV  557
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

524) xccb100_1991 in NC_010688


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  269 bits (1006),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 213/524 (41%), Positives = 337/524 (65%), Gaps = 20/524 (3%)

Query  68   GLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALS-YDRLDGVPLSVLVVYPFA-LSALL-  124
            +LY+  W +ASV++L  I KS   ++VA  + ++ + +      + L +Y ++ +  LL 
Sbjct  63   DLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQ----QAPFLRLYFITWMMHLLL  118

Query  125  -GTPRLLYRAWKDYQIAHSGDAAQR--VLILGAGRAAEGLVRDLRRSG--TFVPVGFLDD  179
             G +RL   +W+ Y+ +  +  +++   LI+G+GR++  L+R++  +      PV  +DD
Sbjct  119  IGGSRL---SWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  180  ATHLHGAKI-QGLNVLGNLDQaaaiaketaaKLLVIAIPSLDASGMQRVVAICESTGLP-  237
             ++ +   I  G++V G + + + + K    K ++IAIP+L    ++ +  +CE+T +  
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  238  FRMVPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIG  297
            F+M P++ NV+ G      LK V +EDLL R PV  D   I   LT+KT++VTGAGGSIG
Sbjct  236  FKM-PNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  298  SEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLF-PDIEVVRVLGDCGDPAVVAHALR  356
            SE+CRQ  +  + RI+LL  +E ++  I+ +L  L+  +IEV+ +++D  D   +   ++
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  357  TATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEP  416
            +  P  V+HAAA K+VPL+E + +EA++NNVL+T N A A + A +  FV +STDKAV+P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  417  VNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTH  476
             NV+GASKR AEM+ QS++   + T F++VRFGNVL+S GSV+PLF+ QI  GGPVTVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  477  PDVTRYFMTIPEACQLVVQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDIA  536
            P++TRYFMTIPEA +LV+QA+A A+ G I+ LDMG PV I  LA ++IRL+G +   DI+
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIG  533

Query  537  ILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQV  580
            I ++G+R+GEKL E L+  DE        KI  + V+ +  E++
Sbjct  534  IEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

525) F7308_0840 in NC_015696


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  269 bits (1004),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 200/435 (46%), Positives = 297/435 (69%), Gaps = 17/435 (3%)

Query  121  SQIEKTKTAVIYGAGAAGTKIAQELSATGYRIK---FFVDDDKALQKRSIDGkrvls--s  175
            S+  K K ++I G+G +G+ + +++  T Y      + VDDD   QK SI +   +    
Sbjct  135  SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCI  194

Query  176  sklrkelrssrFDLLVVALPKSANHIVKKIYKKLESNFNQIRIMPPLEDVLQDESFMSQL  235
              +   ++   +  +++A+P  +++ ++ I K  E+   ++  MP +E+V+ +E  +++L
Sbjct  195  KDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKL  254

Query  236  KPVSVYDLLSRDSKSLDQKSISKFIKDKVILVTGAGGSIGSEIARQCIKYEAKQIVLLDH  295
            K V V DLL+RD+  LD  SISK + +K ILVTGAGGSIGSEI RQ  K+ + +I+LL+H
Sbjct  255  KKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGH  314

Query  296  GEFNLYKITEE-----CHGYNIKSILCSVCDRESFAKVFSKYSPNIVFHAAAYKHVPLVE  350
            GE ++Y I +E      +  ++ +I+  V D+E   KV   Y P +V+HAAA KHVPL+E
Sbjct  315  GENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLME  374

Query  351  ENISRTIRNNILGTKNAIDLAIDSGVGSFILISTDKAVRPTNVMGATKRVCELYLQNVDS  410
             N   +I+NN+LGT+N+ + A  + V+ F+++STDKAV P NVMGA+KRV E+ +Q++++
Sbjct  375  YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNN  434

Query  411  KSTK--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQA  468
             ++K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQA
Sbjct  435  ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQA  494

Query  469  GAIAKNSEVFVLDMGQPVKILDLAKQFIKLSG--RDDIGIEIIGLRPGEKLYEELLIDEN  526
            GA+A  +E+FVLDMG+PVKI+DLAK++I+LSG   +DIGIE+ G+R+GEKL+EELL + +
Sbjct  495  GALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKD  553

Query  527  DISTE--YKDIFIGR  539
            +I  E  Y  I+ G+
Sbjct  554  EIHPEQVYEKIYRGK  568

526) RA0C_0998 in NC_017045


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  267 bits (1000),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 193/473 (41%), Positives = 308/473 (66%), Gaps = 25/473 (5%)

Query  147  LVVKEIFQWAKEYRRSYL-----RKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITAR  201
            L+    + W + YR++++     +K  L++G G  +  + + +M  P++  E V  +   
Sbjct  118  LIGGSRLSW-RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  202  KDSRKAKLLGK---RIYTRDFLEKTTREYLGIDGVLIGSNTASIEEIAEWVNLFLEKDLK  258
             + +K  + +    +   +D+ E   +    I  ++I+  T S + + E  +L    ++ 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKF--NIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  259  VFKSPTVQKLRN---DGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIG  315
            VFK P ++++ +   + +++K+ ++EDLL R P+ ++   + K   +K++LVTG++GSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  316  SEIVRQVAQFEPSLIVVLDQAETPLHEIQLEVEENY-PDIKFEFILADITNKERLESVFK  374
            SEI RQV +F P  I++L+++E ++ +I+ E+   Y  +I    I+AD+ +KER+  V +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  375  EYNFSMVYHAAAYKHVPLIENNPHEAALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNP  434
             Y+  +VYHAAA KHVPL+E NP+EA   N+ G++N A  +    V++FVMVSTDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  435  TNVMGASKRAAELFVQALQNEEDNQTKFITTRFGNVLGSNGSVIPHFIKQIEKGGPVTIT  494
             NVMGASKR AE+ +Q++ N+E ++T F++ RFGNVLGS GSVIP F KQIE GGPVT+T
Sbjct  415  PNVMGASKRVAEMVIQSM-NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  495  HPEIVRYFVTIPEACELVLQAGTMGKGGEIFVFDMGESVKILNLARRMIKLSGLEPDVDI  554
            HP + RYF+TIPEA  LVLQAG+++ GGEIFV+DMG +VKI++LA+ +I+LSG   + DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DI  532

Query  555  KIIYTGLRPGEKLYEELLSDDTKTLP-----TYHEKI-MISKDSVMLYEEIDE  601
             I ++G+R+GEKL+EELL+ D           Y+ K+  I K+   LY+ ID+
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEE--LYNKIDD  583

527) Riean_0761 in NC_014738


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  267 bits (1000),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 193/473 (41%), Positives = 308/473 (66%), Gaps = 25/473 (5%)

Query  147  LVVKEIFQWAKEYRRSYL-----RKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITAR  201
            L+    + W + YR++++     +K  L++G G  +  + + +M  P++  E V  +   
Sbjct  118  LIGGSRLSW-RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  202  KDSRKAKLLGK---RIYTRDFLEKTTREYLGIDGVLIGSNTASIEEIAEWVNLFLEKDLK  258
             + +K  + +    +   +D+ E   +    I  ++I+  T S + + E  +L    ++ 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKF--NIKKIIIAIPTLSQQRLREINKLCEGTNVE  234

Query  259  VFKSPTVQKLRN---DGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIG  315
            VFK P ++++ +   + +++K+ ++EDLL R P+ ++   + K   +K++LVTG++GSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  316  SEIVRQVAQFEPSLIVVLDQAETPLHEIQLEVEENY-PDIKFEFILADITNKERLESVFK  374
            SEI RQV +F P  I++L+++E ++ +I+ E+   Y  +I    I+AD+ +KER+  V +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  375  EYNFSMVYHAAAYKHVPLIENNPHEAALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNP  434
             Y+  +VYHAAA KHVPL+E NP+EA   N+ G++N A  +    V++FVMVSTDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  435  TNVMGASKRAAELFVQALQNEEDNQTKFITTRFGNVLGSNGSVIPHFIKQIEKGGPVTIT  494
             NVMGASKR AE+ +Q++ N+E ++T F++ RFGNVLGS GSVIP F KQIE GGPVT+T
Sbjct  415  PNVMGASKRVAEMVIQSM-NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  495  HPEIVRYFVTIPEACELVLQAGTMGKGGEIFVFDMGESVKILNLARRMIKLSGLEPDVDI  554
            HP + RYF+TIPEA  LVLQAG+++ GGEIFV+DMG +VKI++LA+ +I+LSG   + DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEE-DI  532

Query  555  KIIYTGLRPGEKLYEELLSDDTKTLP-----TYHEKI-MISKDSVMLYEEIDE  601
             I ++G+R+GEKL+EELL+ D           Y+ K+  I K+   LY+ ID+
Sbjct  533  GIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEE--LYNKIDD  583

528) SUN_0106 in NC_009663


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  267 bits (998),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 206/470 (44%), Positives = 318/470 (68%), Gaps = 26/470 (5%)

Query  129  RMSKRFWNESFQAHAVK--PTLLIGVSSKTGTIIQSAMRNEIDYYPAAIVALGKDNSSKD  186
            R+S R+   +F +   K  PTL++G +++ G+++   M N   Y     V +  D+S+K+
Sbjct  123  RLSWRIYRKTFISKEGKKKPTLIVG-GGRGGSLLIRQMMN-TPYMGMEPVLVVDDDSNKQ  180

Query  187  --AYINNVKVYD-FEHLGDVVNEKqitaaiitqaiL-QDELRML-----VNDLNELGVNE  237
              +  + VKV + + ++ ++V+  +I   II+ + L Q+ LR +       +++ + + +
Sbjct  181  KMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPN  240

Query  238  IKRVKLLGSEHEKLEDLSIEDLLARHPKDLDKEGIASFIKGKSVLITGAGGSIGSEIVRQ  297
            I  V     E +KL  + +EDLL+R+P +LD  +I+  +  K++L+TGAGGSIGSEI RQ
Sbjct  241  IENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQ  300

Query  298  -CKQFGASNLILVDNGEYNLYQIGEEI-----EDADLR--LLDVTDAVSLRKLFELKRPE  349
             CK F +  ++L+++GE ++Y+I +E+     E+ ++   + DV D   ++K+ +  +P 
Sbjct  301  VCK-FTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPY  359

Query  350  VVIHAAAYKHVPICEHNPDVAVINNVLGTKNVIDMSILIGVEKLVIISTDKAVRPTNVMG  409
            VV HAAA KHVP+ E NP+ A+ NNVLGT+N  + + L  V K+V++STDKAV P NVMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  410  ATKRVAELYAQNVMSE--KTEIVAVRFGNVLGSSGSVIPKFKHQIEEGGPVTVTHPEITR  467
            A+KRVAE+  Q++ +E  KT++VAVRFGNVLGS GSVIP FK QIE GGPVTVTHP +TR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  468  YFMLIPEACQLVLQTATIAKGGELFILDMGEPIKIVDLAKQMIRLYG-KEDEVEIVFTGL  526
            YFM IPEA +LVLQ++++A GGE+F+LDMG P+KIVDLAK++IRL G KE+++ I F+G+
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGI  539

Query  527  RDGEKLFEELLLDDSEQKTK-YSSIFIAKPTRYDLDKLSQDIEDLLVSED  575
            R GEKLFEELL  D  +  + Y  I+ +K  + + + L + I+D+L++E 
Sbjct  540  RSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINES  589

529) wbpM in NC_004129


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  267 bits (997),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 205/485 (43%), Positives = 320/485 (66%), Gaps = 38/485 (7%)

Query  119  FNYWWLSMVMIGGLRLAMRQYFLGDWFTTAQHVPFTNRDDGLPKVAIYGAGAAGNQLVAA  178
            F  W + +++IGG RL+ R Y          +  F ++++      I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  179  LRLGRLM--RPVAFIDDDGSIADRMIA-GLQVYKP-KHLQQMIDDTGAEEILLAIPsssr  234
            +     M   PV  +DDD++     IA G++V    K++ +++       I++AIP+ S+
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  235  srrrEILGYLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQVDLLAHC  294
             R REI    EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  ++  ++  
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  295  IKGQTVLVTGAGGSIGSELCRQILLQGPSTLILLDHSEFNLYSILSELEQRVSRESRLVK  354
            +  +T+LVTGAGGSIGSE+CRQ+    P  ++LL+H+E ++Y I  EL   + +E   + 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEE--IE  335

Query  355  LLPILGSVRNYEKLLSVMRTWSVDTVYHAAAYKHVPMVEHNIAEGVLNNVMGTLNTAQAA  414
            ++PI++ V++ E++  VM++     VYHAAA KHVP++E N  E++ NNV+GT NTA+AA
Sbjct  336  VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  415  LQCGVANFVLISTDKAVRPTNVMGSTKRLAELTLQALSKELAPVLFDDLSNVSRVNKTRF  474
                V++FV++STDKAV P NVMG++KR+AE+ +Q++++E               +KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNE--------------TSKTDF  441

Query  475  TMVRFGNVLGSSGSVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGG  534
              VRFGNVLGS GSVIPLF KQI +GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  535  DVFVLDMGEPVRIVELAEKMIHLSGLSVRSEKNPHGDIAIEFTGLRPGEKLYEELLIGDN  594
            ++FVLDMG PV+IV+LA ++I+LSG         + DI+IEF+G+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  595  VAATQ  599
            + + Q
Sbjct  555  IHPEQ  559

530) HMPREF0409_01491 in NC_021281


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  266 bits (994),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 218/540 (41%), Positives = 356/540 (66%), Gaps = 20/540 (3%)

Query  55   ILKIYNNSWRFSGISEYTALIALSVSTTIFS--YILRIFFNLGIKSSLYFEtfiiftfll  112
            I+ +Y+ +W ++++SE   LI  SV+++I +   I+ IF + +    LYF T ++  +L+
Sbjct  61   IFDLYHRAWEYASVSELI-LIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLI  119

Query  113  ilSRFLMFLTRMKGIIKKDLNQENVLIYGAGESGVLLVKESKINPNFPYKIVGFLDDNIN  172
              SR L      K +I K+ ++   LI G+G +G LL+++    P      V  +DD+ N
Sbjct  120  GGSR-LSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSN  178

Query  173  kiggkvyglkvlgg-lekvkeivekkeiskiiisMPSVSQNKVSNILKEINKI-EGLSVK  230
            K    + +   + G +  + E+V K +I KIII++P++SQ++    L+EINK+ EG +V 
Sbjct  179  KQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQR----LREINKLCEGTNVE  234

Query  231  I--LPNVDNLIEEGNLATQLRNIKLEDLLGREEIKINTKEVFDFIQDKIIFVTGGGGSIG  288
            +  +PN++N++       +L+++ +EDLLGR+ + ++   +   + +K I+VTG+GGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  289  SELINQIAKYNPKRIINIEINENASYLMELELKRKY-PYLDYKTEIASVRDFGKLDILFN  347
            SE+  Q+ K+ P RI+ +   EN+ Y ++ EL   Y   ++    IA V+D  ++  + +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  348  KYKPDILFHAAAHKHVPLMENNPEEAIKNNIFGTKNIAECCLKYKLESVVLISTDKAVNP  407
             YKP +++HAAAHKHVPLME NP+EAIKNN++GT+N AE      +   V++STDKAVNP
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  408  TNIMGATKRVCEMIFQKYSEKSSNTKFMAVRFGNVLGSNGSVIPIFSKLIEEGKNLTLTH  467
             N+MGA+KRV EM++Q  ++ +S+T F+AVRFGNVLGS GSVIP+F K IE G  +T+TH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  468  KDIIRYFMTIPEAAQLVIEAATIGKGGEILILDMGEPVKIYDLAKNMIKLSG---STVGI  524
             ++ RYFMTIPEA++LV++A++++ GGEI++LDMG PVKI DLAKN+I+LSG     +GI
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  525  DIVGLRPGEKLFEELLYDVNSSEKTSNNKIFITNMENEKVKVNIDDYYAILKDLIKENDI  584
            ++ G+R+GEKLFEELL   +       +KI+  +++    K++ ++ Y  + D++ ++ +
Sbjct  535  EFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQ----KIEKEELYNKIDDFLINESV  590

531) CPF_0910 in NC_008261


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  266 bits (993),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 234/490 (48%), Positives = 345/490 (71%), Gaps = 20/490 (4%)

Query  62   FNLYKNIWHMAGISECIRCliassissillilYKFIFNMDVTIV--FLINSSILICMFSL  119
            F+LY   W+ A++SE I  + + + S +   +   IF  +  ++  ++I       M  L
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITW-----MMHL  116

Query  120  L----TRMSIRIFRKIYFPYKLESNLRKNVLIVGAGHCGRIVIDEMNKNN--KFNPIGIV  173
            L    +R+S RI+RK +++       +K  LIVG+G+ G ++I +M +      +P+ +V
Sbjct  117  LLIGGSRLSWRIYRKTFIS---KEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVV  173

Query  174  DDDLNK-KGTFLNGVKVLGNRDDIEKICKRIKVDiiliaisnlssnDKDEIIKRCENTKI  232
            DDD NK K ++ +GVKV G   DI  + K++++  I+IAI+ LS +   EI K CE T++
Sbjct  174  DDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNV  233

Query  233  KVKIIPSIYDLIDGNVKLTNirdidlrdllgrdETRLDKEEVNNYIKEKivivtggggsi  292
             V  +P+I +++ G++ + +++ +++ DLLGRD   LD   +++ + +K ++VTG+GGSI
Sbjct  234  EVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSI  293

Query  293  gsELCRQIAVFNPKKLIILDIyenyayelenelKRNFKN-LDLEVIIASIRDKSRLKKIF  351
            GSE+CRQ+  F P ++++L+  EN  Y++++EL   +K+ +++  IIA ++DK R+KK+ 
Sbjct  294  GSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVM  353

Query  352  DKYKPDLIFHAAAHKHVPLMENNPEEAIKNNVLGTLNVAECADEFNLEKFVFISTDKAVN  411
            + YKP +++HAAAHKHVPLME NP+EAIKNNVLGT N AE A   ++ KFV +STDKAVN
Sbjct  354  QAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVN  413

Query  412  PTNIMGATKRIGEMIIQAMN-EVSKTDFVAVRFGNVLGSNGSVIPLFIEQIKNGGPVTLT  470
            P N+MGA+KR++EM+IQ+MN E SKTDFVAVRFGNVLGS GSVIPLF  QI  GGPVT+T
Sbjct  414  PPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVT  473

Query  471  HKDITRYFMLIPEAAQLVLQAGAYAKGGEIFVLDMGKPVKIYDLTEKLIRLSGFEPNKDI  530
            H ++TRYFM IPEA++LVLQAGA A GGEIFVLDMGKPVKI DL+ +LIRLSG+  + DI
Sbjct  474  HPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDI  532

Query  531  QIKIVGLRPG  540
             I + G+R+G
Sbjct  533  GIEFSGIRSG  542

532) Sdel_1769 in NC_013512


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  265 bits (989),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 207/500 (42%), Positives = 332/500 (67%), Gaps = 34/500 (6%)

Query  53   FKDFSLSW--SKVTQKTFLMKSFVY-IVAFCVYVPFYYGK---LRLSFMLSELFLYLFSI  106
            F  +  +W  + V++  +++KS    IVA  + VP++  +   LRL F+   + L L++ 
Sbjct  62   FDLYHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLRLYFITWMMHLLLIGG  121

Query  107  NFLMYAYY--LFVNRSHVSKEKNLVIYGAGKAGLKLAEEFRDSQYKIR---YFVDDNTLL  161
            + L    Y   F+++   +K K  +I G+G++G  L  +  ++ Y        VDD++  
Sbjct  122  SRLSWRIYRKTFISKE--GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNK  179

Query  162  QKRSI-DAIRIIS--KE--KLKQKMQSSTYDLLLIAIPSAPTKKINALYEEFKPFFSEIK  216
            QK SI  ++++ +  K+   L +K +     + + +++    + IN L E      +++ 
Sbjct  180  QKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEG-----TNVE  234

Query  217  I--LPTLENILSDTVLSNQLKNITVEDLLARHPQDLDKVKIGEFIHDKVVLITGAGGSIG  274
            +  +P +EN++S+ +  N+LK++ VEDLL+R+P +LD   I+  + +K +L+TGAGGSIG
Sbjct  235  VFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIG  294

Query  275  SEIVRQCLKYNAKKLILVDHSEFNLYQIIEEL-----HSDKLVPIMQSVLNESLLEDVFH  329
            SEI RQ  K+ + +++L++H+E ++Y+I +EL     +   ++PI+  V +   +  V +
Sbjct  295  SEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQ  354

Query  330  RYRLDIVVHAAAYKHVPLVEANPKEGILNNILGTKICIDLAIKYEVGKFILISTDKAVRP  389
             Y+  +V HAAA KHVPL+E NP+E+I NN+LGT+   + A   EV+KF+++STDKAV P
Sbjct  355  AYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNP  414

Query  390  TNVMGATKRVCELYAQNV--DAGNTHIVAVRFGNVLGSSGSVIPKFKAQIEKGGPITVTH  447
             NVMGA+KRV E+  Q++  ++++T++VAVRFGNVLGS GSVIP FK QIE GGP+TVTH
Sbjct  415  PNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTH  474

Query  448  PDITRYFMLIPEACELVLQTGAIGRSGELFILDMGEPVKIVDLAQKMIELSG--KNDITI  505
            P++TRYFM IPEA  LVLQ+GA++ +GE+F+LDMG PVKIVDLA+++I LSG   +DI I
Sbjct  475  PGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGI  534

Query  506  EFTGLRPGEKLYEELLINES  525
            EF+G+R+GEKL+EELL ++ 
Sbjct  535  EFSGIRSGEKLFEELLNKDE  554

533) SAR116_1965 in NC_014010


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  265 bits (989),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 202/467 (44%), Positives = 313/467 (68%), Gaps = 31/467 (6%)

Query  125  LILFILIAGSRVSARLWLGGLYDEQL--KQNKVKRSLIYGAGVAGRELAAALAHN--VEI  180
            ++ ++LI+GSR+S   W   +Y   +  K+ K K +LI G+G +G  L   + +   + +
Sbjct  113  MMHLLLIGGSRLS---W--RIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGM  167

Query  181  KIVGFLDDDKSLHGRKI-RGLNVYDP-NTISNISKKKNISEVMLAMPSVGRQRRNKILSK  238
              V  +DDD + +   I  G++V +  + I+++ KK NI  +++A+P++++QR   I +K
Sbjct  168  EPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREI-NK  226

Query  239  L-RGANLAVRTLPSYSDLAQGRVTVNDIRELSIDDILGRDIVTPDPELMSADITDKVVLI  297
            L  G+N+ V  +P+  ++  G + VN ++ + ++D+LGRD V  D   +S ++T+K +L+
Sbjct  227  LCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILV  286

Query  298  TGAGGSIGGELCKQIIKQKPSKLLLFEQSEFALYSILGSLETALQENISDASCALVPILG  357
            TGAGGSIG+E+C+Q+ K  P +++L+ ++E ++Y I   L    +E+I      ++PI++
Sbjct  287  TGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEI-----EVIPIIA  341

Query  358  SVTDKGLLETTFKEYQPQTIYHAAAYKHVPLVESNPLVGIQNNVFGTLLCAEAAIDAGVK  417
             V DK  +    + Y+P  +YHAAA KHVPL+E NP  +I+NNV+GT   AEAA  A V 
Sbjct  342  DVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVS  401

Query  418  KFVLISTDKAVRPTNVMGASKRIAEMILQALAEEQVTTTFAMVRFGNVLDSSGSVVPLFR  477
            KFV++STDKAV P NVMGASKR+AEM++Q++ +E   T F  VRFGNVL+S GSV+PLF+
Sbjct  402  KFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFK  461

Query  478  EQIKAGGPVTVTHKDVTRYFMTISEAAQLVIQAGAMTQTISSKKSAPLYLLDMGSPIKIY  537
             QI AGGPVTVTH ++TRYFMTI+EA++LV+QAGA++       ++ +++LDMG P+KI 
Sbjct  462  KQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALA------TGGEIFVLDMGKPVKIV  515

Query  538  DLAKRMIELSGLSLISDSIADGDIEINFIGLRSGEKLYEELLIGDSV  584
            DLAK +I LSG         + DI I+F G+RSGEKL+EELL  D +
Sbjct  516  DLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDEI  555

534) Dd586_0670 in NC_013592


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  264 bits (988),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 192/453 (43%), Positives = 316/453 (70%), Gaps = 21/453 (4%)

Query  142  RQKPNVFIYGAGATGRDLLYALIQGDEF---HPVIILDDDESKAG-QIICGIRVHHS-SE  196
            ++KP +++  +G+ G  LL   +    +   +PV+++DDD +K    I  G++V+    +
Sbjct  139  KKKPTLIV--GGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKD  196

Query  197  FEKLTPLYQPVKLLLAINNIKKGQRLRLLEKLSH-WPIEVQSVPSVEDIAAGRAFASEIR  255
            +  L   ++  K+++AI  + + QRLR ++KL +   +EV  +P++E++ +G    + ++
Sbjct  197  IPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLK  255

Query  256  DLDVADLLGRAPVDPDETLLAQNIRGKSVMVTGAGGSIGSELCRQILSQHPQtlvlleln  315
             ++V DLLGR PV+ D + +++++  K+++VTGAGGSIGSE+CRQ+    P+ ++LL   
Sbjct  256  KVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHG  315

Query  316  eynlytIDQELQNIKQHLKLDTQIVAALGSVQKQNRVQRLIQAHQVETIYHAAAYKHVPL  375
            E ++Y I+QEL  +    K + ++++ ++ VQ ++R+++++QA +   +YHAAA KHVPL
Sbjct  316  ENSIYHIHQELIGL---YKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPL  372

Query  376  VESNVIEGIRNNVFGTLACAEAAIQAGVRNFTLISTDKAVRPTNIMGTSKRMAELVLQAL  435
            +E N  E+I+NNV+GT   AEAA  A V +F ++STDKAV P N+MG+SKR+AE+V+Q++
Sbjct  373  MEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSM  432

Query  436  ADKQDKTLFTMVRFGNVLGSSGSVVPLFKQQIRRGGPVTVTHPDIIRYFMLIPEAAQLVI  495
             +   KT F  VRFGNVLGS GSV+PLFK+QI  GGPVTVTHP++ RYFM IPEA++LV+
Sbjct  433  NNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVL  492

Query  496  QAATMGKNGQVFVLDMGEPVKILDLARRMIHLMGMKEYIEGYNEEGDIAIKFTGLRPGEK  555
            QA++++  G++FVLDMG PVKI+DLA+ +I+L        GY+EE DI+I F+G+R+GEK
Sbjct  493  QAGALATGGEIFVLDMGKPVKIVDLAKNLIRL-------SGYKEE-DIGIEFSGIRSGEK  544

Query  556  LYEELLIGGNVEGTS-HPKIMAAREEKLSWQEM  587
            L+EELL  ++++      KI  ++ +K+  +E+
Sbjct  545  LFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

535) wbpM in NC_017911


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  264 bits (987),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 205/511 (41%), Positives = 326/511 (64%), Gaps = 39/511 (7%)

Query  119  FNYWWLSLIMVGGLRLGMRQYFLGDWFAAAQHVPFTNREDGLPRVAIYGAGAAGNQLVAA  178
            F  W + L+++GG RL+ R Y          +  F ++E+      I G+G +G+ L+  
Sbjct  109  FITWMMHLLLIGGSRLSWRIY----------RKTFISKEGKKKPTLIVGGGRGGSLLIRQ  158

Query  179  LRMGR--VMRPV-AFidddasisdriisGLQVYKP-KHIQRMIDATGAQEILLAIPSSNR  234
            +       M PV    DD       I SG++V    K+I  ++     + I++AIP+ ++
Sbjct  159  MMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ  218

Query  235  GRRREILGFLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQDELLEHC  294
             R REI  + EG  ++V  +P + ++ SG + V+ ++ V++ DLLGRD+V  +   +   
Sbjct  219  QRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKE  278

Query  295  IKGQCVLVTGAGGSIGSELCRQILALHPTTLLLFEHSEFNLYSILSELEQRIIRESLPVK  354
            +  + +LVTGAGGSIGSE+CRQ+  + P  ++L+ H+E ++Y I  EL   + +E + V 
Sbjct  279  LTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG-LYKEEIEV-  336

Query  355  LLPILGSIRNPSKLIDVMSTWRVDTVYHAAAYKHVPMVEHNIAEGVFNNVIGTLNTAQAA  414
             +PI++ +++  ++  VM + +   VYHAAA KHVP++E N  E++ NNV+GT NTA+AA
Sbjct  337  -IPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAA  395

Query  415  LQTGVANFVLISTDKAVRPTNIMGSTKRLAELVLQALSREVAPVLFGDNDCLPRVNKTRF  474
              + V++FV++STDKAV P N+MG++KR+AE+V+Q+++ E +              KT F
Sbjct  396  KLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS--------------KTDF  441

Query  475  TMVRFGNVLGSSGSVIPLFHRQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGHGG  534
              VRFGNVLGS GSVIPLF +QI +GGP+TVTHP +TRYFMTIPEA++LV+QAG+++ GG
Sbjct  442  VAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGG  501

Query  535  DVFVLDMGEPVRIIELAEKMIHLSGLSVRSEKNPHGDIAIEFSGLRPGEKLYEELLIGDN  594
            ++FVLDMG PV+I++LA ++I+LSG         + DI+IEFSG+R+GEKL+EELL  D+
Sbjct  502  EIFVLDMGKPVKIVDLAKNLIRLSGYK-------EEDIGIEFSGIRSGEKLFEELLNKDE  554

Query  595  VVATQ-HPMIMSADEDNLAWDVLKVKLTELL  624
            + + Q    I  +  +++  + L  K+ ++L
Sbjct  555  IHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

536) FNFX1_1468 in NC_017450


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  264 bits (987),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 199/462 (44%), Positives = 309/462 (67%), Gaps = 18/462 (3%)

Query  64   GSADKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-K  118
            +  +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +  
Sbjct  135  SKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCI  194

Query  119  AELTKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQL  178
             ++  L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++L
Sbjct  195  KDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKL  254

Query  179  KPVSLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVRQCIKYQAKELVLVDH  238
            K V + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI RQ  K+ +  ++L++H
Sbjct  255  KKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGH  314

Query  239  SEFNLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVE  293
            +E ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E
Sbjct  315  GENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLME  374

Query  294  ENISRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDP  353
             N   AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++ 
Sbjct  375  YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNN  434

Query  354  KNTK--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQA  411
              +K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQA
Sbjct  435  ETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQA  494

Query  412  GAIAKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RDDIDVKIVGLRPGEKLYEELLIEDD  469
            GA+A  +E+FVLDMG+PVKI+DLAK++IRLSG   +DI++ + G+R+GEKL+EELL + D
Sbjct  495  GALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKD  553

Query  470  DVSTD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  508
            ++  +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  554  EIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

537) Fphi_1243 in NC_010336


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  263 bits (983),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 198/432 (46%), Positives = 292/432 (68%), Gaps = 17/432 (3%)

Query  130  EKTKTAVIYGAGAAGTKIAQELSATGYRIK---FFVDDDKALQKRSIDGkrvls--sskl  184
             K K ++I G+G +G+ + +++  T Y      + VDDD   QK SI +   +      +
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  185  rkelrssrFDLLVVALPKSANNIVKKIYKKLESNFNQIRIMPPLEDVLQDESFMSQLKPV  244
               ++   +  +++A+P  +++ ++ I K  E+   ++  MP +E+V+ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  245  SVYDLLSRDSKSLDQKSISKFIKDKVVLVTGAGGSIGSEIVRQCIKYEAKQIVLLDHSEF  304
             V DLL+RD+  LD  SISK + +K +LVTGAGGSIGSEI RQ  K+ + +I+LL+H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  305  NLYKITEE-----CHGYNIKSILCSVCDRESFAKVFSKYSPNIVFHAAAYKHVPLVEENI  359
            ++Y I +E      +  ++ +I+  V D+E   KV   Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  360  SRAIRNNILGTKNAIDLAIDSCVGSFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  419
              AI+NN+LGT+N+ + A  + V+ F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  420  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  477
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  478  AKNSEVFVLDMGQPVKILDLAKQFIKLSG--RDDINIEIIGLRPGEKLYEELLIDENDIS  535
            A  +E+FVLDMG+PVKI+DLAK++I+LSG   +DI IE+ G+R+GEKL+EELL + ++I 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  536  TE--YKDIFIGK  545
             E  Y  I+ GK
Sbjct  557  PEQVYEKIYRGK  568

538) Veis_4862 in NC_008786


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  263 bits (982),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 186/461 (41%), Positives = 315/461 (69%), Gaps = 14/461 (3%)

Query  117  MGAARAGWRTFAERRLVARQGK--PVLILGTLPQASDALRALKGSS--QWQPVGILSPQP  172
            +G++R +WR +  + +++++GK  P LI+G    +S  +R +  ++    +PV ++  ++
Sbjct  119  IGGSRLSWRIY-RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDS  177

Query  173  DEVGRSLQS-VRVWGTPAETARVAQTLAVRALLVASPPGASGR-REMLLQAADTGVALLT  230
            +    S+ S V+V G   + + + + + ++ +++A P  +  R RE+     +T V ++ 
Sbjct  178  NKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK  237

Query  231  LPRPDEWLKSDGAGPrrleledll--greSVQLDVASLSGLLSGQTVLVTGAGGSIGAQL  288
            +P  ++ + ++    +   +E     GR++V+LD+AS+S  L+ +T+LVTGAGGSIG+++
Sbjct  238  MPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEI  297

Query  289  CRQIARFGVRRLVCVDICEFAVYQLEQELREAH-PQMQGCYYTANVREPARLLAIADKHR  347
            CRQ+ +F   R++ ++  E ++Y+++QEL      +++     A+V++  R+  + +  +
Sbjct  298  CRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYK  357

Query  348  PAVVFHAAAYKHVPLMEELNAIEALRTNVAGSWHaaraagvcgagrFVMISTDKAVNPTN  407
            P VV+HAAA KHVPLME  N+ EA++ NV G++++A AA +   ++FVM+STDKAVNP N
Sbjct  358  PYVVYHAAAHKHVPLME-YNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  408  VMGASKRLAELMVQSAAQAFAGTHYVSVRFGNVLGSSGSVVPLFTRQIATGGPVTVTHPD  467
            VMGASKR+AE+++QS  +  + T++V+VRFGNVLGS GSV+PLF +QI +GGPVTVTHP+
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  468  IVRYFMTIAEAAQLVLQAGLMGRSGQIFVMDMGEPVKIIELARMMIRLSGKTELEIPISY  527
            + RYFMTI+EA++LVLQAG ++ +G+IFV+DMG PVKI++LA+ +IRLSG  E +I I +
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEF  536

Query  528  TGLRPGEKLFEELLANDESSVATPHPKL---RIAKTSRQGL  565
            +G+R+GEKLFEELL +DE        K+   ++ K  ++ L
Sbjct  537  SGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEEL  577

539) Fnod_1494 in NC_009718


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  262 bits (979),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 206/487 (43%), Positives = 322/487 (67%), Gaps = 28/487 (5%)

Query  71   YRIVWRYATPKDLIVLLRGLFIGYAFTLIFIH-FTRLVVLPRSVGMLTFLGSYFL--LLS  127
            Y+  W YA+  +LI++++++  +   T I++  FT+            FL  YF+  ++ 
Sbjct  65   YHRAWEYASVSELILIVKSVTSSIVATGIIVPIFTQQA---------PFLRLYFITWMMH  115

Query  128  ARIIYQYLLSWK--RKS-------EKRiaiigagdagVILLNEIKRTNYGTVVAFF--DD  176
              +I    LSW+  RK+        K   I+G+G +G +L+ ++  T Y  + + +  DD
Sbjct  116  LLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDD  175

Query  177  DTQKIGKYVA-GVKVLDSVDSINNYIDKLEIDEILIAIPSASKQVMSRIISTIDTEKVKL  235
            D++K    +A GVKV + +  I + + K++I  I+IAIP+ S+Q +  I    +  +V +
Sbjct  176  DSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEV  235

Query  236  KTFPSITEFLDRNPTITDLREISLQDIVGREPVSVDIDSISKYLTGKTILITGAGGSIGS  295
               P+I + +  +  +  L+ + ++D++GR+PV +D+ SISK LT KTIL+TGAGGSIGS
Sbjct  236  FKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGS  295

Query  296  EISRQVCKFSPKKVVLVGRGENSIYEIYNELKEKY-YELDIVPIISDVTDKNMMEKIFKT  354
            EI RQVCKF+P +++L+G+GENSIY+I +EL   Y  E++++PII+DV DK+ M K+ ++
Sbjct  296  EICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQA  355

Query  355  HRPDIVFHAAAHKHVFFMQNNLYEALRVNVLGTINLAKLSCNYNVEKFVFISTDKAVHPT  414
             +P +V+HAAAHKHV +M+ N  EA++ NVLGT N A  +   +V KFV +STDKAV+P 
Sbjct  356  YKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPP  415

Query  415  SYMGTSKRLAELYLLSI-PDTCKTDFSIVRFGNVIGSRGSVLWKFKKQIENDEPVTITDP  473
            + MG+SKR+AE+ + S+  +T KTDF  VRFGNV+GSRGSV+  FKKQIE + PVT+T+P
Sbjct  416  NVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHP  475

Query  474  RMKRYWMSIPEAVSLVIQAGALSTNRELYVLDMGEQIPVEEVAKALAKIMG--KQNIKIK  531
             M RY M+IPEA  LV+QAGAL+T  E++VLDMG  + + ++AK L ++ G   ++I I 
Sbjct  476  GMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIE  535

Query  532  YTGAIPG  538
            ++G  +G
Sbjct  536  FSGIRSG  542

540) F92_03230 in NC_019537


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  262 bits (978),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

541) wbtA in NC_019551


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  262 bits (978),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

542) FTA_0626 in NC_009749


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  262 bits (978),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

543) FTL_0592 in NC_007880


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  262 bits (978),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

544) FTH_0592 in NC_008369


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  262 bits (978),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

545) wbtA in NC_008245


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  261 bits (975),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRKGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

546) NE061598_08175 in NC_017453


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  261 bits (975),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRKGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

547) wbtA in NC_006570


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  261 bits (975),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRKGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

548) wbtA in NC_009257


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  261 bits (977),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  77   DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  131
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  132  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  191
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  192  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  251
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  252  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  306
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  307  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  366
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  367  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  424
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  425  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  482
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  483  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  518
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

549) wbtA in NC_010677


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  260 bits (973),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 198/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  123  DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  177
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  178  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  237
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  238  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHKCIKYQAKELILVDHSEF  297
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI ++  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  298  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  352
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  353  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  412
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  413  K--LAAVRFGNVLGSSGSVIPKFEEQIRNGGPVTVTHPEITRYFMLIPEACELVLQAGAI  470
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  471  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  528
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  529  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  564
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

550) wbtA in NC_016937


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  260 bits (973),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  67   DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  121
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  122  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  181
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  182  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  241
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  242  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  296
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  297  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  356
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  357  K--LAAVRFGNVLGSSGSVIPKFEEQIRKGGPVTVTHPEITRYFMLIPEACELVLQAGAI  414
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  415  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  472
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  473  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  508
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

551) wbtA in NC_016933


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  260 bits (973),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 199/459 (44%), Positives = 307/459 (67%), Gaps = 18/459 (3%)

Query  67   DKSKTAVIYGAGAAGTKIAQELASAGYRIKC---FVDDNETLQKRSIDSK-KVLS-KAEL  121
            +K K ++I G+G +G+ + +++ ++ Y        VDD+   QK SI S  KV +   ++
Sbjct  138  GKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  122  TKLLLSSRFDLLVIALPRNANQVVKNIYKEFEKDFNQIRIMPPLEEILQDENFMSQLKPV  181
              L+    +  ++IA+P  ++Q +++I K  E    ++  MP +E+++ +E  +++LK V
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKV  257

Query  182  SLYDLLARDTKSLDKESISNFIKNKVVLVTGAGGSIGSEIVHQCIKYQAKELILVDHSEF  241
             + DLL+RD   LD  SIS+ + +K +LVTGAGGSIGSEI +Q  K+ +  ++L++H+E 
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  242  NLYKITEE-----CSHFNINSVLCSVCDRKALAEVFQKYTPNIVFHAAAYKHVPLVEENI  296
            ++Y I +E       ++++ +++  V D+  +  V Q Y P +V+HAAA KHVPL+E N 
Sbjct  318  SIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  297  SRAIRNNILGTKNAIDLAIEAGVESFILISTDKAVRPTNVMGATKRVCELYLQNVDPKNT  356
              AI+NN+LGT+N+ + A  A V  F+++STDKAV P NVMGA+KRV E+ +Q+++   +
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETS  437

Query  357  K--LAAVRFGNVLGSSGSVIPKFEEQIRKGGPVTVTHPEITRYFMLIPEACELVLQAGAI  414
            K  + AVRFGNVLGS GSVIP F  QI  GGPVTVTHP +TRYFM IPEA  LVLQAGA+
Sbjct  438  KTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGAL  497

Query  415  AKNSEVFVLDMGQPVKIIDLAKQFIRLSG--RGDIDIKIVGLRPGEKLYEELLIEEDDVS  472
            A  +E+FVLDMG+PVKI+DLAK++IRLSG    DI+I + G+R+GEKL+EELL + D++ 
Sbjct  498  ATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELL-NKDEIH  556

Query  473  TD--YKDIFIGRRTFYDINTLNQDIES-LIKDDVDQLVI  508
             +  Y  I+ G+    + + L + I+  LI++ V + +I
Sbjct  557  PEQVYEKIYRGKVQKIEKEELYNKIDDFLINESVRDEII  595

552) CapD in NC_020519


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  260 bits (970),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 177/441 (41%), Positives = 287/441 (66%), Gaps = 6/441 (1%)

Query  135  AADSTPALILGGGYIGTNLIQWMMSDPKSPFRPVGVIDDNPELAWQRV-RGVPVLGKFDD  193
             +   P+LI+GGG  G+ LI+ MM+ P     PV V+DD+++     +  GV V G + D
Sbjct  137  EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKD  196

Query  194  IAQVASDTGAELLIVAIGDADSALLRRVQDTANKNGLSVKVMPAIDRVVSKGVRGNDLRD  253
            I+++        +I+AI       LR ++   +   + V  MP I+ V+S  +  N L+ 
Sbjct  197  IPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKK  256

Query  254  LSIEDLLGRQPVETNVSEITGYLTGKRVLVTGAGGSIGSQLCTEIAKYGPAELMMLDRDE  313
            + +EDLLGR+PVE +++ I+  LT K +LVTGAGGSIGS++C ++ K+ P  +M+L+++E
Sbjct  257  VEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGE  316

Query  314  TGLQQVLINVAGNGLLDTDAV-VLADIREADAMKEIFLKRKPEVVFHAAALKHLPMLEQY  372
             ++ ++  ++ G    + + + ++AD+++ + MK +    KP VV+HAAA KH+P++E  
Sbjct  317  NSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYN  376

Query  373  PDEGWKTNVLGTLNVLAAAEAVGVETFVNISTDKAANPTSVLGHSKRVAEKLTAW-YGQN  431
            P+E+ K NVLGT N   AA    V  FV +STDKA NP +V+G SKRVAE +      + 
Sbjct  377  PQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNET  436

Query  432  STSKYLSVRFGNVIGSRGSMLPTFTRLIMEDKPLTVTHPDVTRFFMTIPEACQLVLQAGG  491
            S + +++VRFGNV+GSRGS++P F + I  + P+TVTHP++TR+FMTIPEA +LVLQAG+
Sbjct  437  SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGA  496

Query  492  IGRSGEVLILDMGEPVSILEIAQRMIAMSG---KDIDIVFTGLREGEKMHEELVGDGETE  548
            ++ +GE+++LDMG PV I+++A+ +I +SG    DI+I F+G+R GEK+ EEL+  +E +
Sbjct  497  LATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIH  556

Query  549  DRPFHSKISHAHAESLAPNNL  569
                  KI ++  + +  ++L
Sbjct  557  PEQVYEKIYRGKVQKIEKEEL  577

553) Cgl0347 in NC_003450


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  260 bits (970),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 177/441 (41%), Positives = 287/441 (66%), Gaps = 6/441 (1%)

Query  135  AADSTPALILGGGYIGTNLIQWMMSDPKSPFRPVGVIDDNPELAWQRV-RGVPVLGKFDD  193
             +   P+LI+GGG  G+ LI+ MM+ P     PV V+DD+++     +  GV V G + D
Sbjct  137  EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKD  196

Query  194  IAQVASDTGAELLIVAIGDADSALLRRVQDTANKNGLSVKVMPAIDRVVSKGVRGNDLRD  253
            I+++        +I+AI       LR ++   +   + V  MP I+ V+S  +  N L+ 
Sbjct  197  IPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKK  256

Query  254  LSIEDLLGRQPVETNVSEITGYLTGKRVLVTGAGGSIGSQLCTEIAKYGPAELMMLDRDE  313
            + +EDLLGR+PVE +++ I+  LT K +LVTGAGGSIGS++C ++ K+ P  +M+L+++E
Sbjct  257  VEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGE  316

Query  314  TGLQQVLINVAGNGLLDTDAV-VLADIREADAMKEIFLKRKPEVVFHAAALKHLPMLEQY  372
             ++ ++  ++ G    + + + ++AD+++ + MK +    KP VV+HAAA KH+P++E  
Sbjct  317  NSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYN  376

Query  373  PDEGWKTNVLGTLNVLAAAEAVGVETFVNISTDKAANPTSVLGHSKRVAEKLTAW-YGQN  431
            P+E+ K NVLGT N   AA    V  FV +STDKA NP +V+G SKRVAE +      + 
Sbjct  377  PQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNET  436

Query  432  STSKYLSVRFGNVIGSRGSMLPTFTRLIMEDKPLTVTHPDVTRFFMTIPEACQLVLQAGG  491
            S + +++VRFGNV+GSRGS++P F + I  + P+TVTHP++TR+FMTIPEA +LVLQAG+
Sbjct  437  SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGA  496

Query  492  IGRSGEVLILDMGEPVSILEIAQRMIAMSG---KDIDIVFTGLREGEKMHEELVGDGETE  548
            ++ +GE+++LDMG PV I+++A+ +I +SG    DI+I F+G+R GEK+ EEL+  +E +
Sbjct  497  LATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIH  556

Query  549  DRPFHSKISHAHAESLAPNNL  569
                  KI ++  + +  ++L
Sbjct  557  PEQVYEKIYRGKVQKIEKEEL  577

554) capD in NC_006958


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  260 bits (970),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 177/441 (41%), Positives = 287/441 (66%), Gaps = 6/441 (1%)

Query  150  AADSTPALILGGGYIGTNLIQWMMSDPKSPFRPVGVIDDNPELAWQRV-RGVPVLGKFDD  208
             +   P+LI+GGG  G+ LI+ MM+ P     PV V+DD+++     +  GV V G + D
Sbjct  137  EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKD  196

Query  209  IAQVASDTGAELLIVAIGDADSALLRRVQDTANKNGLSVKVMPAIDRVVSKGVRGNDLRD  268
            I+++        +I+AI       LR ++   +   + V  MP I+ V+S  +  N L+ 
Sbjct  197  IPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKK  256

Query  269  LSIEDLLGRQPVETNVSEITGYLTGKRVLVTGAGGSIGSQLCTEIAKYGPAELMMLDRDE  328
            + +EDLLGR+PVE +++ I+  LT K +LVTGAGGSIGS++C ++ K+ P  +M+L+++E
Sbjct  257  VEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGE  316

Query  329  TGLQQVLINVAGNGLLDTDAV-VLADIREADAMKEIFLKRKPEVVFHAAALKHLPMLEQY  387
             ++ ++  ++ G    + + + ++AD+++ + MK +    KP VV+HAAA KH+P++E  
Sbjct  317  NSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYN  376

Query  388  PDEGWKTNVLGTLNVLAAAEAVGVETFVNISTDKAANPTSVLGHSKRVAEKLTAW-YGQN  446
            P+E+ K NVLGT N   AA    V  FV +STDKA NP +V+G SKRVAE +      + 
Sbjct  377  PQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNET  436

Query  447  STSKYLSVRFGNVIGSRGSMLPTFTRLIMEDKPLTVTHPDVTRFFMTIPEACQLVLQAGG  506
            S + +++VRFGNV+GSRGS++P F + I  + P+TVTHP++TR+FMTIPEA +LVLQAG+
Sbjct  437  SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGA  496

Query  507  IGRSGEVLILDMGEPVSILEIAQRMIAMSG---KDIDIVFTGLREGEKMHEELVGDGETE  563
            ++ +GE+++LDMG PV I+++A+ +I +SG    DI+I F+G+R GEK+ EEL+  +E +
Sbjct  497  LATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIH  556

Query  564  DRPFHSKISHAHAESLAPNNL  584
                  KI ++  + +  ++L
Sbjct  557  PEQVYEKIYRGKVQKIEKEEL  577

555) capD in NC_022040


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  260 bits (970),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 177/441 (41%), Positives = 287/441 (66%), Gaps = 6/441 (1%)

Query  150  AADSTPALILGGGYIGTNLIQWMMSDPKSPFRPVGVIDDNPELAWQRV-RGVPVLGKFDD  208
             +   P+LI+GGG  G+ LI+ MM+ P     PV V+DD+++     +  GV V G + D
Sbjct  137  EGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKD  196

Query  209  IAQVASDTGAELLIVAIGDADSALLRRVQDTANKNGLSVKVMPAIDRVVSKGVRGNDLRD  268
            I+++        +I+AI       LR ++   +   + V  MP I+ V+S  +  N L+ 
Sbjct  197  IPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKK  256

Query  269  LSIEDLLGRQPVETNVSEITGYLTGKRVLVTGAGGSIGSQLCTEIAKYGPAELMMLDRDE  328
            + +EDLLGR+PVE +++ I+  LT K +LVTGAGGSIGS++C ++ K+ P  +M+L+++E
Sbjct  257  VEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGE  316

Query  329  TGLQQVLINVAGNGLLDTDAV-VLADIREADAMKEIFLKRKPEVVFHAAALKHLPMLEQY  387
             ++ ++  ++ G    + + + ++AD+++ + MK +    KP VV+HAAA KH+P++E  
Sbjct  317  NSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYN  376

Query  388  PDEGWKTNVLGTLNVLAAAEAVGVETFVNISTDKAANPTSVLGHSKRVAEKLTAW-YGQN  446
            P+E+ K NVLGT N   AA    V  FV +STDKA NP +V+G SKRVAE +      + 
Sbjct  377  PQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNET  436

Query  447  STSKYLSVRFGNVIGSRGSMLPTFTRLIMEDKPLTVTHPDVTRFFMTIPEACQLVLQAGG  506
            S + +++VRFGNV+GSRGS++P F + I  + P+TVTHP++TR+FMTIPEA +LVLQAG+
Sbjct  437  SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGA  496

Query  507  IGRSGEVLILDMGEPVSILEIAQRMIAMSG---KDIDIVFTGLREGEKMHEELVGDGETE  563
            ++ +GE+++LDMG PV I+++A+ +I +SG    DI+I F+G+R GEK+ EEL+  +E +
Sbjct  497  LATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEELLNKDEIH  556

Query  564  DRPFHSKISHAHAESLAPNNL  584
                  KI ++  + +  ++L
Sbjct  557  PEQVYEKIYRGKVQKIEKEEL  577

556) Noca_4184 in NC_008699


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  259 bits (968),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 185/450 (42%), Positives = 297/450 (66%), Gaps = 26/450 (5%)

Query  118  LVLAAWARASWRTLQERDERTGAGEDTERTLVMGAGEAGRELITSMQRDPLRRYL---PV  174
            L+L + +R SWR    R    +       TL++G+G +G  LI  M   P   Y+   PV
Sbjct  116  LLLIGGSRLSWRIY--RKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP---YMGMEPV  170

Query  175  GLLDDDPYKRHRRL-RGVPVLGTSCDLEKEVARTGATMVVIAIPSASAETVNRLR-LTAL  232
             ++DDD+ K+   +  GV V G   D+   V +     ++IAIP+ S +   RLR +  L
Sbjct  171  LVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQ---RLREINKL  227

Query  233  --DAHVSVKVLPSTTQLLTDSVGIRDLRDINITDVLGRNQLDTDVASIAGYLAGRKVLVT  290
              +++V V  +P+  +++++ + +  L+ +++ D+LGR+ ++ D+ASI+  L+ + +LVT
Sbjct  228  CEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVT  287

Query  291  GAGGSIGSELCRQIYRYQPAELMMLDRDESALHSVQLSIHGRALLDSDDV----ILCDIR  346
            GAGGSIGSE+CRQ+ ++ P  +M+L+++E+++  ++  + G   L  +++    I+ D++
Sbjct  288  GAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIG---LYKEEIEVIPIIADVQ  344

Query  347  DEKAVRTIFANRRPDVVFHAAALKHLPMLEQYPAEAVKTNVIGTRTVLDAADLVGVDRFV  406
            D   ++ +    +P VV+HAAA KH+P++E  P EA+K NV+GTR   +AA L  V +FV
Sbjct  345  DKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFV  404

Query  407  NISTDKAANPSSVLGYSKRVAERITAAQAREASGT-YLSVRFGNVLGSRGSVLAAFARQI  465
             +STDKA NP++V+G SKRVAE +  +   E+S T +++VRFGNVLGSRGSV++ F +QI
Sbjct  405  MVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  466  AAGGPITVTHPDVSRFFMTIEEACQLVIQAAAIGGPGEALVLDMGEPVKIVDVAEQLIEQ  525
             AGGP+TVTHP+++R+FMTI EA +LV+QA+A++  GE +VLDMG PVKIVD+A +LI  
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  526  AG---TPVPIEYTGLREGEKLHEELFGEGE  552
            +G     + IE++G+R GEKL EEL+  +E
Sbjct  525  SGYKEEDIGIEFSGIRSGEKLFEELLNKDE  554

557) Weevi_1083 in NC_015144


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  256 bits (958),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 194/470 (42%), Positives = 318/470 (68%), Gaps = 5/470 (1%)

Query  131  LLMVYCRAMYKTFYRWYVLETPNKVRSIIYGAGDSGIITLNALQNDTYRKSLIFAFVDDN  190
            LL+   R   + + + ++    +K  ++I G+G +G + +  + N  Y        VDD+
Sbjct  117  LLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDD  176

Query  191  KKKQKTTI-HGINVLSPDVLTESFIVQHRIDEIILSIQNITNEQIFEITRKLDKLPVKLK  249
             +KQK +I  G++V +       ++ +  I  II++I  ++++++ EI +  +   V + 
Sbjct  177  SNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVF  236

Query  250  IIPPASNWLDGKYTSKQIKKLKIEDLLGRKPINLDNPIIDEEIvgkvvvvtgaagSIGGE  309
             +P   N + G    +++KK+ +EDLLGR P++LD + I  E+  K ++VTGA+GSIG+E
Sbjct  237  KMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSE  296

Query  310  LARQIAQKAFKQLILIDVAESALYDIQQGFKTTNSEETHFI--IGNIRDYKRMEQIFIRF  367
            + RQ+ + +  +++L++ +E+++Y+I+Q +     EE + I  I++++D  RM ++   +
Sbjct  297  ICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAY  356

Query  368  RPDIVFHAAAYKHVPLMEQYPFESVNTNVRGTKNVADLSVLYGVKKFVMISTDKAVNPTN  427
            +P +V+HAAA KHVPLME  P E+++ NV GT+N A+ + L  V KFVM+STDKAVNP N
Sbjct  357  KPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPN  416

Query  428  VMGATKRIAEIYVSCLNKKSA-TNFIVTRFGNVLGSNGSVIPLFKRQIEKGGPLTVTHEG  486
            VMGA+KR+AE+ +  +N+ ++ T+F+  RFGNVLGS GSVIPLFK+QIE GGP+TVTH G
Sbjct  417  VMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPG  476

Query  487  ITRFFMTIPEACQLVLEAAVMGNGGEIYVFDMGKSVKIMDLAKRMIYLSGLKYPDDIDIR  546
            +TR+FMTIPEA +LVL+A+ ++ GGEI+V+DMGK+VKI+DLAK +I LSG K  +DI+I 
Sbjct  477  MTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIE  535

Query  547  ITGLRPGEKIYEELLADKENTIKTHHDKIMIAKVRDCDCDEMEFKINKLI  596
            ++G+R+GEK++EELL   E       +KI  +KV+  + +E+  KI+ ++
Sbjct  536  FSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFL  585

558) RSal33209_1438 in NC_010168


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  255 bits (951),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 185/448 (42%), Positives = 308/448 (69%), Gaps = 20/448 (4%)

Query  138  EGKPRPGEQAQRTLVYGAGFLGNSLVNRMLQDTQSPFFPVGLVDDDPAKKHLHLSS-VSV  196
            EGK +P      TL+ G+G  G+ L+ +M++       PV +VDDD+ K+ + ++S V V
Sbjct  137  EGKKKP------TLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKV  190

Query  197  LGRGDDLAEIAKRTHAEILVLAFAKVESAKVREISEMVAGlrlrvlvlpplQKMLDGGI-  255
             G   D++E+ K+ +   +++A++ +   ++REI+ +  G  + V+ +P +++++ G I 
Sbjct  191  QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIE  250

Query  256  -SDFREIAVEDLIGRRPVDIQVEKIAGYVTGKRVLVTGAGGSIGSELCRQLVGFDPSELM  314
             + ++ + VEDL+GR PV++++  I+  +T K +LVTGAGGSIGSE+CRQ+  F P  +M
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  315  MLDRDESGLQATQLSISGHGLLNGRD----TILADIRDENAIREIFLDRRPEVVFHASAL  370
            +L+++E+++   +  + G   L   +     I+AD++D + ++ +    +P VV+HA+A 
Sbjct  311  LLGHGENSIYHIHQELIG---LYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAH  367

Query  371  KHAPLLQQYPQEAWKTNVVGTLNVLQAARDADVQTLVNISTDKAANPTTALGHSKRVAEK  430
            KH PL++  PQEA K NV+GT N  +AA+ A+V  +V +STDKA NP   +G SKRVAE 
Sbjct  368  KHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEM  427

Query  431  LTAWMAQQTGKT-YVSVRFGNVIGSRGSMLPLFSEQIRTGGPLTVTHPDVTRFFMTIPEA  489
            +   M ++T+KT +V+VRFGNV+GSRGS++PLF  QI +GGP+TVTHP++TR+FMTIPEA
Sbjct  428  VIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEA  487

Query  490  CQLVIQAGAIGTGGEVLLLDIGEPVRILDVAKQMIAMSG---KDIEIVFTGLRPSEKLHE  546
             +LV+QAGA++TGGE+++LD+G PV+I+D+AK++I +SG    DI I F+G+R++EKL E
Sbjct  488  SRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFE  547

Query  547  VLVGYDEVGARPLHPKISHTRAKPLNPQ  574
             L+  DE+ +  +  KI + + + ++ +
Sbjct  548  ELLNKDEIHPEQVYEKIYRGKVQKIEKE  575

559) TREPR_2356 in NC_015578


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  254 bits (949),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 191/450 (43%), Positives = 295/450 (66%), Gaps = 11/450 (2%)

Query  2    ATKKSGRLYIIGAGFAGQALANEIKTKAIFG-ELVAFLDDDPEVMGRKI-DGIPVLGPIK  59
              KK   L I+G+G +G  L  ++   +  G E V  +DDD++     I  G+ V G IK
Sbjct  137  EGKKKPTL-IVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIK  195

Query  60   DVARLLRMNPADEAIIAMPGASREYIKEIYGILKRAGFERIRILPGMSQSIEGDARLIQT  119
            D++ L++       IIA+P  S++ ++EI  +   +  E ++ +P + + + G+  + + 
Sbjct  196  DIPELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIEVNKL  254

Query  120  RSIDPQDLLGRTPVAVNIRQSLAYLRGKRVLVTGAGGSIGSELCRQLLSGGVSRLYLLGH  179
            + ++ +DLLGR PV +++      L  K +LVTGAGGSIGSE+CRQ+      R+ LLGH
Sbjct  255  KKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGH  314

Query  180  GENSIYQIDRELRLLQEEGVGEKTTLIPIIGDLKDRDYMHFLLARLKADVIFHAAAYKHV  239
            GENSIY+I++EL  L  E +     +IPII+D++D++ M  ++   K+ V++HAAA KHV
Sbjct  315  GENSIYHIHQELIGLYKEEIE----VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHV  370

Query  240  PMMEENPVAVIENNFFGTDNLISAARSNGVKRFVLITTDKAVNPVSVYGASKYLCERLVL  299
            P+ME NP   I NN +GT N   AA+   V +FV+++TDKAVNP +V GASK + E ++ 
Sbjct  371  PLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQ  430

Query  300  DAAKKAG-LNYMVVRFGNVLGSRGSIMPLFQKQIEKGGPVTITHPEMRRYFMTIPEACSL  358
               + ++  +++ VRFGNVLGSRGS++PLF+KQIE GGPVT+THP M RYFMTIPEA  L
Sbjct  431  SMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  359  VLKAGGVGENGKLYLLDMGEPVRIRDMAEQMIRFYGFEPEEDIKIEYIGLRPGERLDEDL  418
            VL+AG+++  G +++LDMG PV+I D+A ++IR+ G+  EEDI IE+ G+R+GE+L E+L
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEEL  549

Query  419  WGRDEIPVDTEFKRILRVERKQPVNPDPAF  448
              +DEI  +  + +I R  + Q ++ +  +
Sbjct  550  LNKDEIHPEQVYEKIYR-GKVQKIEKEELY  578

560) Hore_16980 in NC_011899


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  253 bits (945),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 192/433 (45%), Positives = 298/433 (69%), Gaps = 8/433 (1%)

Query  2    KNLLIIGAGSAGKLVLEEILKNNESY-NYNIIGFLDADINKHGTSI-HGYKVLGHHDNIS  59
            K  LI+G+G +G L++ +++  N +Y   + +  +D D NK+  SI  G KV G   +I+
Sbjct  141  KPTLIVGGGRGGSLLIRQMM--NTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIP  198

Query  60   FYIDQYSVDEVIVATTEIDRAGLEKIYQNTKKFQIGIKVLPTLQELLMEEPFTKQLREVR  119
              + ++++  +I+A   + +  L  I +     ++ +  +P +++++  E   ++L+ V 
Sbjct  199  ELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVE  258

Query  120  VEDLLGREPVKINSDNIYKYINHKKVLVTGAAGSIGSELCRQIAKYDPRELIILDInene  179
            VEDLLGR+PV ++  +I K + HK +LVTGA+GSIGSE+CRQ+ K+ P  +++L+  EN 
Sbjct  259  VEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENS  318

Query  180  lyflnlflKRHY--NLNVSLEICNIREKSKLEYLFNYYKPQLVFHAAAHKHVPLMEKNID  237
            +Y ++  L   Y  +++V   I ++++K ++  + + YKP +V+HAAAHKHVPLME N +
Sbjct  319  IYHIHQELIGLYKEEIEVIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQ  378

Query  238  EAIKNNVFGTKNLLDLSDKYGVEKFVLISTDKAVNPTNVMGATKRLSEIMLEKINK-YSK  296
            EAIKNNV+GT+N  + +    V KFV++STDKAVNP NVMGA+KR++E++++ +N+  SK
Sbjct  379  EAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVIQSMNNETSK  438

Query  297  TQYMAVRFGNVLGSNGSVVPLFKTLIKEGKDLTVTHEEATRYFMTIPEAVQLVLEAGFIG  356
            T+++AVRFGNVLGS GSV+PLFK  I  G  +TVTH   TRYFMTIPEA +LVL+AG ++
Sbjct  439  TDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALA  498

Query  357  KGGEVFVLDMGEPVKIIDLAKKMIELSGLTLGRDINIKITGLRPGEKLHEELMHDINSCE  416
             GGE+FVLDMG PVKI+DLAK++I LSG     DI I ++G+R+GEKL EEL++  +   
Sbjct  499  TGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEIHP  557

Query  417  KTQNKKIYIAKIR  429
                 KIY +K++
Sbjct  558  EQVYEKIYRGKVQ  570

561) Snov_3217 in NC_014217


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  252 bits (942),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 199/479 (42%), Positives = 301/479 (63%), Gaps = 37/479 (7%)

Query  139  YRQ---SRSRLSSPVLIYGAGSAGRQLLASLQASGDY---APVAFIDDARELH------G  186
            YR+   S+     P LI G+G +G  L+  +  +  Y    PV  +DD  + +      G
Sbjct  129  YRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTP-YMGMEPVLVVDDDSNKQKMSIASG  187

Query  187  REIGGCRIYSPNRIGELIAQHDIGSMLLAIPSATRQQRKAIVERL-DPFGVRVLTIPGMA  245
              + GC     + I EL+ + +I  +++AIP+ ++Q+ + I ++L +   V V+ +P + 
Sbjct  188  VKVQGC----IKDIPELVKKFNIKKIIIAIPTLSQQRLREI-NKLCEGTNVEVFKMPNIE  242

Query  246  DIVVGRATISETREVAIEDLLGRDPIPPRQDLLDANIRGKTAMVTGAGGSIGSELCRQIA  305
            +++ G   ++  + V +EDLLGRDP+      +  ++  KT +VTGAGGSIGSE+CRQ+ 
Sbjct  243  NVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVC  302

Query  306  RQRVARLVLLENSEFALYSVerelamlaarerlelplvpllGSVQDGERVSAALRSHGVQ  365
            +    R++LL ++E ++Y +++EL  L   E   +P++   + VQD ER+   +++    
Sbjct  303  KFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPII---ADVQDKERMKKVMQAYKPY  359

Query  366  TVFHAAAYKHVPLVEQNVVDGVRNNVFGTETVARSAIEAGVGAFVLVSTDKAVRPTSVMG  425
             V+HAAA KHVPL+E N  ++++NNV+GT   A +A  A V+ FV+VSTDKAV P +VMG
Sbjct  360  VVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMG  419

Query  426  ASKRVAELVCQALARQQSATTFSIVRFGNVLGSSGSVIPLFRQQIEAGGPITVTHHEMTR  485
            ASKRVAE+V Q++  + S T F  VRFGNVLGS GSVIPLF++QIEAGGP+TVTH  MTR
Sbjct  420  ASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTR  479

Query  486  YFMTIREAAQLVIQAGALARGGDVFVLDMGEPVRIIDLAMRMARLSGLNPVIRQPghgdg  545
            YFMTI EA++LV+QAGALA GG++FVLDMG PV+I+DLA  + RLSG +           
Sbjct  480  YFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKE----------  529

Query  546  agaggdIEIVMSQLRPGEKLYEELLIGGDAVPT-VHPRILTASESSLDWPELASILQNL  603
                 DI I  S +R+GEKL+EELL  ++  P  V  +I  +    ++  EL + ++++
Sbjct  530  ----EDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDF  584

562) TREAZ_0660 in NC_015577


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  251 bits (937),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 184/429 (43%), Positives = 289/429 (68%), Gaps = 11/429 (2%)

Query  11   IIGAGFAGQTLAKEIREKGIFG-EVVAFLDDDPAKIGRRLDE-IPVLGPIRDVARLLRLH  68
            I+G+G +G  L +++ +    G E V  +DDD+ K    +   + V G I+D++ L++  
Sbjct  145  IVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKF  204

Query  69   PADEAIIAIPSASREYLEELYQILKNAGFERIRILPGISQIIEGDAHLIQTRSIDPQDLL  128
                 IIAIP+ S++ L E+ ++   +  E ++ +P I +++ G+ ++ + + ++ +DLL
Sbjct  205  NIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIEVNKLKKVEVEDLL  263

Query  129  GRTPVAVNLRQSLSYLRGKRVLVTGAGGSIGSELCRQLLSGGASRLYLFGHGENSIYQID  188
            GR PV +++      L  K +LVTGAGGSIGSE+CRQ+    + R+ L+GHGENSIY+I+
Sbjct  264  GRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIH  323

Query  189  KELRLLQEEGVGEKAVLVPVIGDLKDREYMDWILEHLKADVVFHTAAYKHVPMMEENPVA  248
            +EL  L  E +     ++P+I+D++D+E M  +++  K+ VV+H+AA KHVP+ME NP  
Sbjct  324  QELIGLYKEEIE----VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQE  379

Query  249  SIENNLFGTDNLISAAKKHGVKRFVHITTDKAVEPVSVYGISKYLCEGLVLDAARENSGN  308
            +I NN++GT N   AAK   V +FV ++TDKAV+P +V G SK + E +V+++  +++++
Sbjct  380  AIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE-MVIQSMNNETSK  438

Query  309  KGINFMVVRFGNVLGSRGSIMPLFQKQIEKGGPVTITHPEMKRWFMTIPEACSLVLKAGG  368
               +F+ VRFGNVLGSRGS++PLF+KQIE GGPVT+THP M R FMTIPEA  LVL+AG+
Sbjct  439  T--DFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGA  496

Query  369  VGENGNLYLLDMGEPVKIKDLAEQMIRFYGLTPEKDIKIEYIGCRPGERLGEKLWWDDEE  428
            ++  G++++LDMG PVKI DLA ++IR+ G   E DI IE+ G R+GE+L E L   DE 
Sbjct  497  LATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEI  555

Query  429  PRPTAFDRI  437
                 +++I
Sbjct  556  HPEQVYEKI  564

563) BHWA1_01906 in NC_012225


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  250 bits (934),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 190/441 (44%), Positives = 300/441 (69%), Gaps = 14/441 (3%)

Query  2    NKKNIVIIGAGNAGETLASEILTSDNNNEYNILCFLDDDENKKQVNIENHSIDVKGKVKD  61
            +KK  +I+G+G +G  L  +++ +       +L  +DDD NK++++I + ++ V+G +KD
Sbjct  139  KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-VDDDSNKQKMSIAS-GVKVQGCIKD  196

Query  62   IEKTIDFYKNQNieieeiiiaiPTLKQKELLEILDIIYPTGIK-YKILPCFFEIIKGNAS  120
            I   +     ++++I  IIIAIPTL Q+ L EI  +   T +  +K +P + +++ G+  
Sbjct  197  IPELV-----KKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIE  250

Query  121  IKDIRNIEPSDLLGREEIGFDEKEISAYYQNKTILVTGGGGSIGSELVRQLITLPVKKVM  180
            ++ ++++E  DLLGR+ + +D   IS    +KTILVTG+GGSIGSE+ RQ+  +   ++M
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  181  ALDNSESAIHSLIMSINDR-KNEKNKHKFTYIISNVRDYVKVDKILKEENPDIIFHAAAH  239
             L+++E++I  +   + +  K+E +      II++V+D  ++ K+++  +P +++HAAAH
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIP---IIADVQDKERMKKVMQAYKPYVVYHAAAH  367

Query  240  KHLPFMEAYPEEAIKNNILATENIATLAIKNNIKNFVFISTDKAVRPTSLMGASKRICER  299
            KH+P+ME  P+EAIKNN+L+T N A  A   ++ +FV +STDKAV P ++MGASKR+ E 
Sbjct  368  KHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEM  427

Query  300  MIMSLSHEQNSTAFKITRFGNVLGSSGSVIPVFEKQIREGKPLTVTHPEMVRFFMSIREA  359
            +I S+++E + T F   RFGNVLGS GSVIP+F KQI  G P+TVTHP M R+FM+I EA
Sbjct  428  VIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEA  487

Query  360  ARLVIKACTL-NDGIIFTLDMGKPVKILDLAKNMLKMYGLTEKDIPIIFTGIREGEKLYE  418
            +RLV++A +L  +G IF LDMGKPVKI+DLAKN++++ G  E DI I F+GIR GEKL+E
Sbjct  488  SRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFE  547

Query  419  EILMDDETLIPSQYKKLFIAK  439
            E+L  DE      Y K++ +K
Sbjct  548  ELLNKDEIHPEQVYEKIYRGK  568

564) Bint_2797 in NC_017243


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  249 bits (929),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 191/441 (44%), Positives = 299/441 (68%), Gaps = 14/441 (3%)

Query  2    NKKNIVILGAGNAGETLASEILTSDDSNEYNILCFLDDDENKKQVNIENHSIDVKGKIKD  61
            +KK  +I+G+G +G  L  +++ +       +L  +DDD NK++++I + ++ V+G IKD
Sbjct  139  KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-VDDDSNKQKMSIAS-GVKVQGCIKD  196

Query  62   IENTIEYYKNHSieieeiiiaiPTLKQKELLEILDIIYPTGIR-YKILPCFFEIIKGNAS  120
            I + +       ++I  IIIAIPTL Q+ L EI  +   T +  +K +P + +++ G+  
Sbjct  197  IPELV-----KKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIE  250

Query  121  IKDIRNIEPSDLLGREEIGFDEKEISAYYQDKTILVTGGGGSIGSELVRQLITLPVKKVM  180
            ++ ++++E  DLLGR+ + +D   IS    +KTILVTG+GGSIGSE+ RQ+  +   ++M
Sbjct  251  VNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIM  310

Query  181  ALDNSESAIHSLIMSINDR-KNEKNKHKFQYIISNVRDYVKVDKILKEENPDIIFHAAAH  239
             L+++E++I  +   + +  K+E +      II++V+D  ++ K+++  +P +++HAAAH
Sbjct  311  LLGHGENSIYHIHQELIGLYKEEIEVIP---IIADVQDKERMKKVMQAYKPYVVYHAAAH  367

Query  240  KHLPFMEAYPEEAIKNNILATENIATLAIKNNIKNFVFISTDKAVRPTSLMGASKRICER  299
            KH+P+ME  P+EAIKNN+L+T N A  A   ++ +FV +STDKAV P ++MGASKR+ E 
Sbjct  368  KHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEM  427

Query  300  MIMSLSHEQNSTAFKITRFGNVLGSSGSVIPVFEKQIREGKPLTVTHPEMVRFFMSIREA  359
            +I S+++E + T F   RFGNVLGS GSVIP+F KQI  G P+TVTHP M R+FM+I EA
Sbjct  428  VIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEA  487

Query  360  ARLVIKACTL-NDGIIFTLDMGKPVKILDLAKNMLKMYGLTEKDIPIIFTGIREGEKLYE  418
            +RLV++A +L  +G IF LDMGKPVKI+DLAKN++++ G  E DI I F+GIR GEKL+E
Sbjct  488  SRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFE  547

Query  419  EILMDDETLIPSQYKKLFIAK  439
            E+L  DE      Y K++ +K
Sbjct  548  ELLNKDEIHPEQVYEKIYRGK  568

565) TPE_2560 in NC_022097


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  245 bits (913),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 185/437 (43%), Positives = 287/437 (66%), Gaps = 13/437 (2%)

Query  7    KQNPSIYIVGAGFAGTAIAKEISSKEIFGKVSAFL-DDDPKKIGTKI-DGVPVLGSISEA  64
            K++P++ IVG+G +G+ + +++ +    G  + ++ DDD++K    I  GV V G I + 
Sbjct  139  KKKPTL-IVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDI  197

Query  65   VRLIRIDSGAEALIAIPSISSERLREIFGILKNAGFSRIKLLPAISQIIDGSAHLVQARD  124
              L++  +    +IAIP++S +RLREI  +   +    +K+ P I +++ G  ++ + + 
Sbjct  198  PELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM-PNIENVMSGEIEVNKLKK  256

Query  125  IDPQDLLSRTPVKISLKKSLAYLRGKRVLITGAGGSIGSELARQLLSGGAERLYLFGHGE  184
            ++ +DLL+R PV + +      L  K +L+TGAGGSIGSE+ RQ+    ++R+ L+GHGE
Sbjct  257  VEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGE  316

Query  185  NSIYQIHKELKLLQSGGVGDKATIVPIIGELKDRNYMRYIINRLKCDAVFHTAAYKHVPL  244
            NSIY+IH+EL  L    +     ++PII++++D++ M+ +++  K   V+H+AA KHVPL
Sbjct  317  NSIYHIHQELIGLYKEEIE----VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPL  372

Query  245  MEENPVAVIENNVFGTKNLLDACLEFGVKKFVLISTDKAVEPVSVYGLSKMLNEKSVLQA  304
            ME NP   I NNV+GT+N  +A     V KFV++STDKAV+P +V G SK + E  +   
Sbjct  373  MEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMVI---  429

Query  305  AEKAKNSNENSAYMFVRFGNVLGSRGSIFPLFVEQIKTGGPVTVTDKKMTRYFMTIPEAC  364
             +  +N   ++ ++ VRFGNVLGSRGS++PLF  QI +GGPVTVT+  MTRYFMTIPEA 
Sbjct  430  -QSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEAS  488

Query  365  SLVLQTGGVGKSGQSYLLDMGEPVNIFETAKQLIRYMGFEPEKDIKIEIIGVREGERLEE  424
             LVLQ+G+++ +G+ ++LDMG PV+I + AK+LIR  G+  E DI IE+ G+R GE+L E
Sbjct  489  RLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFE  547

Query  425  PLWSKSEYLEKTDYEKI  441
             L +K E      YEKI
Sbjct  548  ELLNKDEIHPEQVYEKI  564

566) PGLF in NC_005090


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  245 bits (915),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 199/483 (42%), Positives = 314/483 (66%), Gaps = 28/483 (5%)

Query  119  FVLSVIFIGTIRISKRVYLEN--VREHSPKVALIFGGGTQAANLVKSALSGE-IPVYPIA  175
             ++ +++IG  R+S R+Y      +E   K +LI GGG  ++ L++  ++   + + P+ 
Sbjct  112  WMMHLLLIGGSRLSWRIYRKTFISKEGKKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVL  171

Query  176  IIDDNPKIEGTYIAN-LRVYPMSSCSELITKHKISTAVLTKEYAKPPL-EKLFKEIHAL-  232
            ++DD+++ +   IA+ ++V    +C   I        +     A P L ++ ++EI+ L 
Sbjct  172  VVDDDSNKQKMSIASGVKV---QGCIKDIPELVKKFNIKKIIIAIPTLSQQRLREINKLC  228

Query  233  GITDI------KIATTLKED---EPLKDVSIEDLLSRPPKDLDRSVIKEFIHDKTVLitg  283
              T++      +I   +  +   + LK V +EDLL+R P +LD + I   + +KT+L+TG
Sbjct  229  EGTNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTG  288

Query  284  gggsigsEIARQCVNFGAQKVILLDHSEYNLYAITEEL-----QKFNILPVMFSILEKER  338
            +GGSIGSEI RQ  +F +++++LL+H+E ++Y I +EL     + ++++P++  + +KER
Sbjct  289  AGGSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYKEEIEVIPIIADVQDKER  348

Query  339  LLELFKQEKPDILLHAAAYKHVPLCEGNMYSAVENNVLGSKNVIDCAIECEIPKIVVIST  398
            +  + +  KP ++ HAAA KHVPL E N   A+ NNVLG++N  + A   E++K+V++ST
Sbjct  349  MKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVST  408

Query  399  DKAVRPTNVMGATKRVVELYAQNV--DSKKSEIVAVRFGNVLGSSGSVVPKFKAQIDRGG  456
            DKAV P NVMGA+KRV E+  Q++  ++ K+++VAVRFGNVLGS GSV+P FK QI+ GG
Sbjct  409  DKAVNPPNVMGASKRVAEMVIQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGG  468

Query  457  PITVTHPEITRYFMLIPEACRLVLQAAAIAKGGEIFILDMGAPVKIVDLAKNMLKLYkke  516
            P+TVTHP +TRYFM IPEA RLVLQA+A+A GGEIF+LDMG PVKIVDLAKN+++L    
Sbjct  469  PVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK  528

Query  517  eeieiV-FTGLRPGEKLYEELLIDDSEQKTQ-YESIHVARPTPYDIHKLNRDIKE-LIQA  573
            EE   + F+G+R+GEKL+EELL  D  +  Q YE I  ++    + + L   I + LI+ 
Sbjct  529  EEDIGIEFSGIRSGEKLFEELLNKDEIHPEQVYEKIYRGKVQKIEKEELYNKIDDFLINE  588

Query  574  SNK  576
            S +
Sbjct  589  SVR  591

567) TDE0714 in NC_002967


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  243 bits (908),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 183/442 (42%), Positives = 288/442 (66%), Gaps = 11/442 (2%)

Query  7    QKTSIYIVGAGLAGTMIAHEISEKNIFGKVAAFL-DDDPKKIGTKI-DGIPVFGPISETV  64
            +K +  IVG+G +G+++ +++ +    G  + ++ DDD++K    I  G+ V G I +  
Sbjct  139  KKKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIP  198

Query  65   HLIRIDAGDEALIAIPSMRSERLREIYELLKSAGFSKIKLLPAISQIIDGSAHLVQAREI  124
            +L++       +IAIP++  +RLREI  L  ++    +K+ P I +++ G  ++ + + +
Sbjct  199  ELVKKFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFKM-PNIENVMSGEIEVNKLKKV  257

Query  125  DPQDLLTRTPVTISLKKSLAYLRGKRVLITGAGGSIGSELCRQLLSGGAERLYLFGHGEN  184
            + +DLL R PV + +      L  K +L+TGAGGSIGSE+CRQ+    ++R+ L+GHGEN
Sbjct  258  EVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGEN  317

Query  185  SIYQIYKELKILQAGGVGDKATIVPVIGELKDREYMRYIIKQLKCDAVFHTAAYKHVPLM  244
            SIY+I +EL  L    +     ++P+I++++D+E M+ +++  K   V+H+AA KHVPLM
Sbjct  318  SIYHIHQELIGLYKEEIE----VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLM  373

Query  245  EENPVAVIENNVFGTKNLLDACIEFGVKRFVLISTDKAVEPVSVYGVSKLLSEKLVLQAA  304
            E NP   I NNV+GT+N  +A     V +FV++STDKAV+P +V G SK ++E +V+Q+ 
Sbjct  374  EYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE-MVIQSM  432

Query  305  ETVKEKKDSAYMFVRFGNVLGSRGSIFPLFVEQIQNGGPVTVTDKKMIRFFMTIPEACSL  364
            +  +E   + ++ VRFGNVLGSRGS++PLF  QI+ GGPVTVT+  M R+FMTIPEA  L
Sbjct  433  N--NETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRL  490

Query  365  VLQTGGVGKSGESYLLDMGEPVNIYETAKQLISYMGFEPEKDIKIEIIGPREGERLEEPL  424
            VLQ+G+++ +GE ++LDMG PV+I + AK+LI   G+  E DI IE+ G R GE+L E L
Sbjct  491  VLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEEL  549

Query  425  WSSTEYLEKTDYEKIMRLRDKK  446
             +  E      YEKI R + +K
Sbjct  550  LNKDEIHPEQVYEKIYRGKVQK  571

568) BP951000_1375 in NC_014330


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  242 bits (902),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 189/440 (43%), Positives = 296/440 (68%), Gaps = 14/440 (3%)

Query  3    KKNIVIIGAGNAGETLASEILTSDENNEYNILCFLDDDENKKEINIYNHTIKVEGKVKDI  62
            KK  +I+G+G +G  L  +++ +       +L  +DDD NK+ ++I    +KV+G +KDI
Sbjct  140  KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-VDDDSNKQKMSI-ASGVKVQGCIKDI  197

Query  63   EKIINKYKNDNIELEEIIIAIPTLKQKELLEILDIIYPTGIK-YKILPCFFEIIKGNASI  121
              +++     ++++  IIIAIPTL Q+ L EI  +   T +  +K +P + +++ G+  +
Sbjct  198  PELVK-----KFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIEV  251

Query  122  KDIRNIEPSDLLGREEIGFDEKEISDYYKDKTILVTGGGGSIGSELVRQLVTLPVKKVMA  181
            + ++++E  DLLGR+ + +D   IS    +KTILVTG+GGSIGSE+ RQ+  +   ++M 
Sbjct  252  NKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIML  311

Query  182  LDNSEGAIHSLIMSLNDR-KNEKNKHKFKYIISNVRDYVKVDKILKQENPDIIFHAAAHK  240
            L+++E +I  +   L +  K+E +      II++V+D  ++ K+++  +P +++HAAAHK
Sbjct  312  LGHGENSIYHIHQELIGLYKEEIEVIP---IIADVQDKERMKKVMQAYKPYVVYHAAAHK  368

Query  241  HLPFMEEYPEEAIKNNILATENIATLAiknniknfifiSTDKAVRPTSLMGASKRICERM  300
            H+P+ME  P+EAIKNN+L+T N A  A   ++ +F+ +STDKAV P ++MGASKR+ E +
Sbjct  369  HVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMV  428

Query  301  IMSLSHEQNITKFKITRFGNVLGSSGSVIPVFERQIREGKPLTVTHPEMVRFFMSIREAA  360
            I S+++E + T F   RFGNVLGS GSVIP+F +QI  G P+TVTHP M R+FM+I EA+
Sbjct  429  IQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEAS  488

Query  361  RLVIKACTLNDGV-IFTLDMGKPVKILDLAKNMLKMYGLTEKDIPIIFTGIREGEKLYEE  419
            RLV++A +L  G  IF LDMGKPVKI+DLAKN++++ G  E DI I F+GIR GEKL+EE
Sbjct  489  RLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEE  548

Query  420  ILMDDETLIPSQYKKLFIAK  439
            +L  DE      Y K++ +K
Sbjct  549  LLNKDEIHPEQVYEKIYRGK  568

569) B2904_orf2613 in NC_018607


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  242 bits (902),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 189/440 (43%), Positives = 296/440 (68%), Gaps = 14/440 (3%)

Query  3    KKNIVIIGAGNAGETLASEILTSDENNEYNILCFLDDDENKKEINIYNHTIKVEGKVKDI  62
            KK  +I+G+G +G  L  +++ +       +L  +DDD NK+ ++I    +KV+G +KDI
Sbjct  140  KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-VDDDSNKQKMSI-ASGVKVQGCIKDI  197

Query  63   EKIINKYKNDNIELEEIIIAIPTLKQKELLEILDIIYPTGIK-YKILPCFFEIIKGNASI  121
              +++     ++++  IIIAIPTL Q+ L EI  +   T +  +K +P + +++ G+  +
Sbjct  198  PELVK-----KFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIEV  251

Query  122  KDIRNIEPSDLLGREEIGFDEKEISDYYKDKTILVTGGGGSIGSELVRQLVTLPVKKVMA  181
            + ++++E  DLLGR+ + +D   IS    +KTILVTG+GGSIGSE+ RQ+  +   ++M 
Sbjct  252  NKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIML  311

Query  182  LDNSEGAIHSLIMSLNDR-KNEKNKHKFKYIISNVRDYVKVDKILKQENPDIIFHAAAHK  240
            L+++E +I  +   L +  K+E +      II++V+D  ++ K+++  +P +++HAAAHK
Sbjct  312  LGHGENSIYHIHQELIGLYKEEIEVIP---IIADVQDKERMKKVMQAYKPYVVYHAAAHK  368

Query  241  HLPFMEEYPEEAIKNNILATENIATLAiknniknfifiSTDKAVRPTSLMGASKRICERM  300
            H+P+ME  P+EAIKNN+L+T N A  A   ++ +F+ +STDKAV P ++MGASKR+ E +
Sbjct  369  HVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMV  428

Query  301  IMSLSHEQNITKFKITRFGNVLGSSGSVIPVFERQIREGKPLTVTHPEMVRFFMSIREAA  360
            I S+++E + T F   RFGNVLGS GSVIP+F +QI  G P+TVTHP M R+FM+I EA+
Sbjct  429  IQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEAS  488

Query  361  RLVIKACTLNDGV-IFTLDMGKPVKILDLAKNMLKMYGLTEKDIPIIFTGIREGEKLYEE  419
            RLV++A +L  G  IF LDMGKPVKI+DLAKN++++ G  E DI I F+GIR GEKL+EE
Sbjct  489  RLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEE  548

Query  420  ILMDDETLIPSQYKKLFIAK  439
            +L  DE      Y K++ +K
Sbjct  549  LLNKDEIHPEQVYEKIYRGK  568

570) BPP43_08200 in NC_019908


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  242 bits (902),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 189/440 (43%), Positives = 296/440 (68%), Gaps = 14/440 (3%)

Query  3    KKNIVIIGAGNAGETLASEILTSDENNEYNILCFLDDDENKKEINIYNHTIKVEGKVKDI  62
            KK  +I+G+G +G  L  +++ +       +L  +DDD NK+ ++I    +KV+G +KDI
Sbjct  140  KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-VDDDSNKQKMSI-ASGVKVQGCIKDI  197

Query  63   EKIINKYKNDNIELEEIIIAIPTLKQKELLEILDIIYPTGIK-YKILPCFFEIIKGNASI  121
              +++     ++++  IIIAIPTL Q+ L EI  +   T +  +K +P + +++ G+  +
Sbjct  198  PELVK-----KFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIEV  251

Query  122  KDIRNIEPSDLLGREEIGFDEKEISDYYKDKTILVTGGGGSIGSELVRQLVTLPVKKVMA  181
            + ++++E  DLLGR+ + +D   IS    +KTILVTG+GGSIGSE+ RQ+  +   ++M 
Sbjct  252  NKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIML  311

Query  182  LDNSEGAIHSLIMSLNDR-KNEKNKHKFKYIISNVRDYVKVDKILKQENPDIIFHAAAHK  240
            L+++E +I  +   L +  K+E +      II++V+D  ++ K+++  +P +++HAAAHK
Sbjct  312  LGHGENSIYHIHQELIGLYKEEIEVIP---IIADVQDKERMKKVMQAYKPYVVYHAAAHK  368

Query  241  HLPFMEEYPEEAIKNNILATENIATLAiknniknfifiSTDKAVRPTSLMGASKRICERM  300
            H+P+ME  P+EAIKNN+L+T N A  A   ++ +F+ +STDKAV P ++MGASKR+ E +
Sbjct  369  HVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMV  428

Query  301  IMSLSHEQNITKFKITRFGNVLGSSGSVIPVFERQIREGKPLTVTHPEMVRFFMSIREAA  360
            I S+++E + T F   RFGNVLGS GSVIP+F +QI  G P+TVTHP M R+FM+I EA+
Sbjct  429  IQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEAS  488

Query  361  RLVIKACTLNDGV-IFTLDMGKPVKILDLAKNMLKMYGLTEKDIPIIFTGIREGEKLYEE  419
            RLV++A +L  G  IF LDMGKPVKI+DLAKN++++ G  E DI I F+GIR GEKL+EE
Sbjct  489  RLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEE  548

Query  420  ILMDDETLIPSQYKKLFIAK  439
            +L  DE      Y K++ +K
Sbjct  549  LLNKDEIHPEQVYEKIYRGK  568

571) WESB_0185 in NC_018604


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  242 bits (902),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 189/440 (43%), Positives = 296/440 (68%), Gaps = 14/440 (3%)

Query  3    KKNIVIIGAGNAGETLASEILTSDENNEYNILCFLDDDENKKEINIYNHTIKVEGKVKDI  62
            KK  +I+G+G +G  L  +++ +       +L  +DDD NK+ ++I    +KV+G +KDI
Sbjct  140  KKPTLIVGGGRGGSLLIRQMMNTPYMGMEPVLV-VDDDSNKQKMSI-ASGVKVQGCIKDI  197

Query  63   EKIINKYKNDNIELEEIIIAIPTLKQKELLEILDIIYPTGIK-YKILPCFFEIIKGNASI  121
              +++     ++++  IIIAIPTL Q+ L EI  +   T +  +K +P + +++ G+  +
Sbjct  198  PELVK-----KFNIKKIIIAIPTLSQQRLREINKLCEGTNVEVFK-MPNIENVMSGEIEV  251

Query  122  KDIRNIEPSDLLGREEIGFDEKEISDYYKDKTILVTGGGGSIGSELVRQLVTLPVKKVMA  181
            + ++++E  DLLGR+ + +D   IS    +KTILVTG+GGSIGSE+ RQ+  +   ++M 
Sbjct  252  NKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIML  311

Query  182  LDNSEGAIHSLIMSLNDR-KNEKNKHKFKYIISNVRDYVKVDKILKQENPDIIFHAAAHK  240
            L+++E +I  +   L +  K+E +      II++V+D  ++ K+++  +P +++HAAAHK
Sbjct  312  LGHGENSIYHIHQELIGLYKEEIEVIP---IIADVQDKERMKKVMQAYKPYVVYHAAAHK  368

Query  241  HLPFMEEYPEEAIKNNILATENIATLAiknniknfifiSTDKAVRPTSLMGASKRICERM  300
            H+P+ME  P+EAIKNN+L+T N A  A   ++ +F+ +STDKAV P ++MGASKR+ E +
Sbjct  369  HVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAEMV  428

Query  301  IMSLSHEQNITKFKITRFGNVLGSSGSVIPVFERQIREGKPLTVTHPEMVRFFMSIREAA  360
            I S+++E + T F   RFGNVLGS GSVIP+F +QI  G P+TVTHP M R+FM+I EA+
Sbjct  429  IQSMNNETSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEAS  488

Query  361  RLVIKACTLNDGV-IFTLDMGKPVKILDLAKNMLKMYGLTEKDIPIIFTGIREGEKLYEE  419
            RLV++A +L  G  IF LDMGKPVKI+DLAKN++++ G  E DI I F+GIR GEKL+EE
Sbjct  489  RLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRLSGYKEEDIGIEFSGIRSGEKLFEE  548

Query  420  ILMDDETLIPSQYKKLFIAK  439
            +L  DE      Y K++ +K
Sbjct  549  LLNKDEIHPEQVYEKIYRGK  568

572) Mlg_0801 in NC_008340


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  234 bits (871),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 212/504 (43%), Positives = 331/504 (66%), Gaps = 37/504 (7%)

Query  65   LFGLYRAVVRW--MGAHALATITKGVMASTLALTVIISVMPQWTLSLPVVLNFA--LLSL  120
            +F+LY+    W   +   L  I K+V +S +A  +I+++  Q +  L   L F   ++ L
Sbjct  61   IFDLYHRA--WEYASVSELILIVKSVTSSIVATGIIVPIFTQQAPFLR--LYFITWMMHL  116

Query  121  CAVGGLRIVVRGW--FRRAANGEGDRHRQPVVIYGAGNCGIELASSLIGNTHYR---PVA  175
              +GG R+   +W  +R++  +  ++ +  +++ G+G  G  L   ++ NT Y    PV 
Sbjct  117  LLIGGSRL---SWRIYRKTFISKEGKKKPTLIV-GGGRGGSLLIRQMM-NTPYMGMEPVL  171

Query  176  FVDDDPRKQG-TIIQGVSVHPPQR-LPALIDRERVAYVLLAMARLARPERRRIVERL-EP  232
             VDDD+ KQ  +I  GV V+   + +P L+ +  +  +++A++ L++ +R R +++L E 
Sbjct  172  VVDDDSNKQKMSIASGVKVQGCIKDIPELVKKFNIKKIIIAIPTLSQ-QRLREINKLCEG  230

Query  233  LNVHILTIPPLSDLVTRRAGMedvrevevedLLGRDAVAPRPELLRRCIAGHAVMVTGAG  292
             NV+++ +P + ++++    ++ ++ VEVEDLLGRD+V      + + ++  +++VTGAG
Sbjct  231  TNVEVFKMPNIENVMSGEIEVNKLKKVEVEDLLGRDPVELDMASISKELTHKTILVTGAG  290

Query  293  GSIGSElcrqilrlrprrlvlVERSEFALYAIEKELR--YQMEGQAHQPELHPVLGDVTD  350
            GSIGSE+CRQ+ ++ P R++L+ ++E ++Y I++EL   Y+     ++ E+ P+++DV D
Sbjct  291  GSIGSEICRQVCKFTPDRIMLLGHGENSIYHIHQELIGLYK-----EEIEVIPIIADVQD  345

Query  351  GERMQALMSAFAIHSVYHAAAYKHVPLVEANSLQGIHNNVFGTLRTaeaaaaaGVPHFVL  410
             ERM+ +M A+    VYHAAA KHVPL+E N+ ++I NNV+GT  TAEAA  A V+ FV+
Sbjct  346  KERMKKVMQAYKPYVVYHAAAHKHVPLMEYNPQEAIKNNVLGTRNTAEAAKLAEVSKFVM  405

Query  411  ISTDKAVRPTNVMGASKRMAEQVVQDLARRQGVPTVFSMVRFGNVLGSSGSVVPLFREQI  470
            +STDKAV P NVMGASKR+AE V+Q +   +   T F  VRFGNVLGS GSV+PLF+ QI
Sbjct  406  VSTDKAVNPPNVMGASKRVAEMVIQSMNN-ETSKTDFVAVRFGNVLGSRGSVIPLFKKQI  464

Query  471  RKGGPVTVTHPEVTRYFMTIPEAASLVIQAGAMARGGEVFVLDMGEPVRIDDLARRMIRL  530
              GGPVTVTHP +TRYFMTIPEA+ LV+QAGA+A GGE+FVLDMG PV+I DLA+ +IRL
Sbjct  465  EAGGPVTVTHPGMTRYFMTIPEASRLVLQAGALATGGEIFVLDMGKPVKIVDLAKNLIRL  524

Query  531  SGLTVRDEARPAGDIEIRYTGLRP  554
            SG           DI I ++G+R+
Sbjct  525  SGYK-------EEDIGIEFSGIRS  541

573) Tresu_1065 in NC_015385


> NC_007350_R2|23|G23|73661372|YP_300153.1|Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305|+|23016..24851|-|SSP0063|capsular 
polysaccharide biosynthesis protein
Length=611

 Score =  233 bits (867),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 178/431 (42%), Positives = 284/431 (66%), Gaps = 13/431 (3%)

Query  10   IIGAGFAGQMIANDIAKKKVFGTVSAFL--DDDKNLIGTKIDGIPVIGPIDSIADVLRVN  67
            I+G+G +G ++  ++ +    G  + ++  DD ++   +   G+ V G I  I+++++  
Sbjct  145  IVGGGRGGSLLIRQMMNTPYMGMEPVLVVDDDSNKQKMSIASGVKVQGCIKDIPELVKKF  204

Query  68   GADQAVIAIPSAPVERIRKIYSSLKKCGFFQIKI--LPSISQVIDEKAHIIQARDINPLD  125
               + +IAIP+ + +R+R I    K C   ++ +  +P+I +V+    ++ + + ++  D
Sbjct  205  NIKKIIIAIPTLSQQRLREIN---KLCEGTNVEVFKMPNIENVMSGEIEVNKLKKVEVED  261

Query  126  ILGRTPVTIPLAKSLSYLRGKRVLITGAGGSIGSELARQLLSGGAERLYLFGHGENSIVN  185
            +LGR PV + +A     L  K +L+TGAGGSIGSE+ RQ+    ++R+ L+GHGENSI +
Sbjct  262  LLGRDPVELDMASISKELTHKTILVTGAGGSIGSEICRQVCKFTPDRIMLLGHGENSIYH  321

Query  186  IYRELHVLQDEGVGQKASIVPIIGDMKDREYVKYIISHTHADVIFHCAAYKHVPMMEENS  245
            I +EL  L  E +     ++PII+D++D+E +K ++    + V++H AA KHVP+ME N+
Sbjct  322  IHQELIGLYKEEIE----VIPIIADVQDKERMKKVMQAYKPYVVYHAAAHKHVPLMEYNP  377

Query  246  IAAIENNVFGTKNLLDAALESGTEKFVLISTDKAVEPVSVYGASKMLCEKLVIqaaqnak  305
              AI NNV+GT+N  +AA  +   KFV++STDKAV+P +V GASK + E +VIQ+ +N  
Sbjct  378  QEAIKNNVLGTRNTAEAAKLAEVSKFVMVSTDKAVNPPNVMGASKRVAE-MVIQSMNNET  436

Query  306  knqaFMFVRFGNVLGSRGSILPIFMEQIQNGGPVTVTDPQMERYFMTIPEACSLVLQTGG  365
             +  F+ VRFGNVLGSRGS++P+F  QI+ GGPVTVT+P M RYFMTIPEA  LVLQ+G+
Sbjct  437  SKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPGMTRYFMTIPEASRLVLQAGA  496

Query  366  VGTNGASYLLDMGEPIKILELAKQVIKFSGFTPDKEIKIQFIGARKGERLEEPLWLKEEN  425
            ++T G  ++LDMG P+KI++LAK++I++SG+  + +I I+F G R GE+L E L  K+E 
Sbjct  497  LATGGEIFVLDMGKPVKIVDLAKNLIRLSGYK-EEDIGIEFSGIRSGEKLFEELLNKDEI  555

Query  426  PEPTEYKKILK  436
                 Y KI +
Sbjct  556  HPEQVYEKIYR  566